Result of FASTA (ccds) for
pF1KB5185
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5185, 398 aa
1>>>pF1KB5185 398 - 398 aa - 398 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.7855+/-0.000755; mu= 10.7965+/- 0.045
mean_var=104.5080+/-21.309, 0's: 0 Z-trim(111.9): 30 B-trim: 532 in 1/52
Lambda= 0.125458
statistics sampled from 12731 (12761) to 12731 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.749), E-opt: 0.2 (0.392), width: 16
Scan time: 2.980
The best scores are: opt bits E(32554)
CCDS10254.1 STOML1 gene_id:9399|Hs108|chr15 ( 398) 2643 488.5 4.5e-138
CCDS58382.1 STOML1 gene_id:9399|Hs108|chr15 ( 355) 2319 429.9 1.8e-120
CCDS58381.1 STOML1 gene_id:9399|Hs108|chr15 ( 310) 2010 373.9 1.1e-103
CCDS58385.1 STOML1 gene_id:9399|Hs108|chr15 ( 327) 1771 330.7 1.2e-90
CCDS58384.1 STOML1 gene_id:9399|Hs108|chr15 ( 348) 1735 324.2 1.2e-88
CCDS58383.1 STOML1 gene_id:9399|Hs108|chr15 ( 347) 1718 321.1 1e-87
CCDS6830.1 STOM gene_id:2040|Hs108|chr9 ( 288) 436 89.0 6e-18
CCDS45040.1 STOML3 gene_id:161003|Hs108|chr13 ( 282) 427 87.4 1.8e-17
CCDS9367.1 STOML3 gene_id:161003|Hs108|chr13 ( 291) 427 87.4 1.9e-17
CCDS1331.1 NPHS2 gene_id:7827|Hs108|chr1 ( 383) 375 78.0 1.6e-14
CCDS75892.1 STOM gene_id:2040|Hs108|chr9 ( 168) 364 75.8 3.2e-14
>>CCDS10254.1 STOML1 gene_id:9399|Hs108|chr15 (398 aa)
initn: 2643 init1: 2643 opt: 2643 Z-score: 2592.4 bits: 488.5 E(32554): 4.5e-138
Smith-Waterman score: 2643; 100.0% identity (100.0% similar) in 398 aa overlap (1-398:1-398)
10 20 30 40 50 60
pF1KB5 MLGRSGYRALPLGDFDRFQQSSFGFLGSQKGCLSPERGGVGTGADVPQSWPSCLCHGLIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MLGRSGYRALPLGDFDRFQQSSFGFLGSQKGCLSPERGGVGTGADVPQSWPSCLCHGLIS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 FLGFLLLLVTFPISGWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 FLGFLLLLVTFPISGWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 TRAFNVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 TRAFNVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 RPLREIQMEKLKISDQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDSTLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 RPLREIQMEKLKISDQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDSTLQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 QLALHFLGGSMNSMAGGAPSPGPADTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTALQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 QLALHFLGGSMNSMAGGAPSPGPADTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTALQP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 FLSEALVSQVGACYQFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEADLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 FLSEALVSQVGACYQFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEADLR
310 320 330 340 350 360
370 380 390
pF1KB5 ALLCRELRPLGAYMSGRLKVKGDLAMAMKLEAVLRALK
::::::::::::::::::::::::::::::::::::::
CCDS10 ALLCRELRPLGAYMSGRLKVKGDLAMAMKLEAVLRALK
370 380 390
>>CCDS58382.1 STOML1 gene_id:9399|Hs108|chr15 (355 aa)
initn: 2317 init1: 1464 opt: 2319 Z-score: 2276.2 bits: 429.9 E(32554): 1.8e-120
Smith-Waterman score: 2319; 99.7% identity (99.7% similar) in 354 aa overlap (45-398:3-355)
20 30 40 50 60 70
pF1KB5 FDRFQQSSFGFLGSQKGCLSPERGGVGTGADVPQSWPSCLCHGLISFLGFLLLLVTFPIS
::::::::::::::::::::::::::::::
CCDS58 MPDVPQSWPSCLCHGLISFLGFLLLLVTFPIS
10 20 30
80 90 100 110 120 130
pF1KB5 GWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLRTRAFNVPPCKLASK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLRTRAFNVPPCKLASK
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB5 DGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLKRPLREIQMEKLKIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 DGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLKRPLREIQMEKLKIS
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB5 DQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDSTLQQLALHFLGGSMNSM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 DQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDSTLQQLALHFLGGSMNSM
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB5 AGGAPSPGPADTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTALQPFLSEALVSQVGACY
::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 AGGAPSPGP-DTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTALQPFLSEALVSQVGACY
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB5 QFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEADLRALLCRELRPLGAYM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 QFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEADLRALLCRELRPLGAYM
280 290 300 310 320 330
380 390
pF1KB5 SGRLKVKGDLAMAMKLEAVLRALK
::::::::::::::::::::::::
CCDS58 SGRLKVKGDLAMAMKLEAVLRALK
340 350
>>CCDS58381.1 STOML1 gene_id:9399|Hs108|chr15 (310 aa)
initn: 2008 init1: 1155 opt: 2010 Z-score: 1974.8 bits: 373.9 E(32554): 1.1e-103
Smith-Waterman score: 2010; 99.7% identity (99.7% similar) in 311 aa overlap (88-398:1-310)
60 70 80 90 100 110
pF1KB5 LISFLGFLLLLVTFPISGWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRV
::::::::::::::::::::::::::::::
CCDS58 MIVFRLGRIRTPQGPGMVLLLPFIDSFQRV
10 20 30
120 130 140 150 160 170
pF1KB5 DLRTRAFNVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 DLRTRAFNVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKA
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB5 LLKRPLREIQMEKLKISDQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LLKRPLREIQMEKLKISDQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDS
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB5 TLQQLALHFLGGSMNSMAGGAPSPGPADTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTA
:::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::
CCDS58 TLQQLALHFLGGSMNSMAGGAPSPGP-DTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTA
160 170 180 190 200
300 310 320 330 340 350
pF1KB5 LQPFLSEALVSQVGACYQFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LQPFLSEALVSQVGACYQFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEA
210 220 230 240 250 260
360 370 380 390
pF1KB5 DLRALLCRELRPLGAYMSGRLKVKGDLAMAMKLEAVLRALK
:::::::::::::::::::::::::::::::::::::::::
CCDS58 DLRALLCRELRPLGAYMSGRLKVKGDLAMAMKLEAVLRALK
270 280 290 300 310
>>CCDS58385.1 STOML1 gene_id:9399|Hs108|chr15 (327 aa)
initn: 2174 init1: 1771 opt: 1771 Z-score: 1740.7 bits: 330.7 E(32554): 1.2e-90
Smith-Waterman score: 2036; 82.2% identity (82.2% similar) in 398 aa overlap (1-398:1-327)
10 20 30 40 50 60
pF1KB5 MLGRSGYRALPLGDFDRFQQSSFGFLGSQKGCLSPERGGVGTGADVPQSWPSCLCHGLIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MLGRSGYRALPLGDFDRFQQSSFGFLGSQKGCLSPERGGVGTGADVPQSWPSCLCHGLIS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 FLGFLLLLVTFPISGWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 FLGFLLLLVTFPISGWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 TRAFNVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TRAFNVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 RPLREIQMEKLKISDQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDSTLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RPLREIQMEKLKISDQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDSTLQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 QLALHFLGGSMNSMAGGAPSPGPADTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTALQP
:::::::::::::::::::::::
CCDS58 QLALHFLGGSMNSMAGGAPSPGP-------------------------------------
250 260
310 320 330 340 350 360
pF1KB5 FLSEALVSQVGACYQFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEADLR
::::::::::::::::::::::::::
CCDS58 ----------------------------------GRGRVGHGVPDGIPDVVVEMAEADLR
270 280
370 380 390
pF1KB5 ALLCRELRPLGAYMSGRLKVKGDLAMAMKLEAVLRALK
::::::::::::::::::::::::::::::::::::::
CCDS58 ALLCRELRPLGAYMSGRLKVKGDLAMAMKLEAVLRALK
290 300 310 320
>>CCDS58384.1 STOML1 gene_id:9399|Hs108|chr15 (348 aa)
initn: 1735 init1: 1735 opt: 1735 Z-score: 1705.1 bits: 324.2 E(32554): 1.2e-88
Smith-Waterman score: 2189; 87.4% identity (87.4% similar) in 398 aa overlap (1-398:1-348)
10 20 30 40 50 60
pF1KB5 MLGRSGYRALPLGDFDRFQQSSFGFLGSQKGCLSPERGGVGTGADVPQSWPSCLCHGLIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MLGRSGYRALPLGDFDRFQQSSFGFLGSQKGCLSPERGGVGTGADVPQSWPSCLCHGLIS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 FLGFLLLLVTFPISGWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLR
::::::::::::::::::::
CCDS58 FLGFLLLLVTFPISGWFALK----------------------------------------
70 80
130 140 150 160 170 180
pF1KB5 TRAFNVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLK
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ----------LASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLK
90 100 110 120 130
190 200 210 220 230 240
pF1KB5 RPLREIQMEKLKISDQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDSTLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RPLREIQMEKLKISDQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDSTLQ
140 150 160 170 180 190
250 260 270 280 290 300
pF1KB5 QLALHFLGGSMNSMAGGAPSPGPADTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTALQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 QLALHFLGGSMNSMAGGAPSPGPADTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTALQP
200 210 220 230 240 250
310 320 330 340 350 360
pF1KB5 FLSEALVSQVGACYQFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEADLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 FLSEALVSQVGACYQFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEADLR
260 270 280 290 300 310
370 380 390
pF1KB5 ALLCRELRPLGAYMSGRLKVKGDLAMAMKLEAVLRALK
::::::::::::::::::::::::::::::::::::::
CCDS58 ALLCRELRPLGAYMSGRLKVKGDLAMAMKLEAVLRALK
320 330 340
>>CCDS58383.1 STOML1 gene_id:9399|Hs108|chr15 (347 aa)
initn: 1716 init1: 867 opt: 1718 Z-score: 1688.5 bits: 321.1 E(32554): 1e-87
Smith-Waterman score: 2172; 87.2% identity (87.2% similar) in 398 aa overlap (1-398:1-347)
10 20 30 40 50 60
pF1KB5 MLGRSGYRALPLGDFDRFQQSSFGFLGSQKGCLSPERGGVGTGADVPQSWPSCLCHGLIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MLGRSGYRALPLGDFDRFQQSSFGFLGSQKGCLSPERGGVGTGADVPQSWPSCLCHGLIS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 FLGFLLLLVTFPISGWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLR
::::::::::::::::::::
CCDS58 FLGFLLLLVTFPISGWFALK----------------------------------------
70 80
130 140 150 160 170 180
pF1KB5 TRAFNVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLK
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ----------LASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLK
90 100 110 120 130
190 200 210 220 230 240
pF1KB5 RPLREIQMEKLKISDQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDSTLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RPLREIQMEKLKISDQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDSTLQ
140 150 160 170 180 190
250 260 270 280 290 300
pF1KB5 QLALHFLGGSMNSMAGGAPSPGPADTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTALQP
::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::
CCDS58 QLALHFLGGSMNSMAGGAPSPGP-DTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTALQP
200 210 220 230 240
310 320 330 340 350 360
pF1KB5 FLSEALVSQVGACYQFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEADLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 FLSEALVSQVGACYQFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEADLR
250 260 270 280 290 300
370 380 390
pF1KB5 ALLCRELRPLGAYMSGRLKVKGDLAMAMKLEAVLRALK
::::::::::::::::::::::::::::::::::::::
CCDS58 ALLCRELRPLGAYMSGRLKVKGDLAMAMKLEAVLRALK
310 320 330 340
>>CCDS6830.1 STOM gene_id:2040|Hs108|chr9 (288 aa)
initn: 433 init1: 301 opt: 436 Z-score: 435.6 bits: 89.0 E(32554): 6e-18
Smith-Waterman score: 436; 37.1% identity (71.4% similar) in 175 aa overlap (55-227:30-202)
30 40 50 60 70 80
pF1KB5 FLGSQKGCLSPERGGVGTGADVPQSWPSCLCHGLISFLGFLLLLVTFPISGWFALKIVPT
: .. ..::. ..::::: :. .::.
CCDS68 MAEKRHTRDSEAQRLPDSFKDSPSKGLGPCGWILVAFSFLFTVITFPISIWMCIKIIKE
10 20 30 40 50
90 100 110 120 130 140
pF1KB5 YERMIVFRLGRIRT--PQGPGMVLLLPFIDSFQRVDLRTRAFNVPPCKLASKDGAVLSVG
::: :.:::::: .:::. ..:: ::: .::.:: .:..:: .. .::....::
CCDS68 YERAIIFRLGRILQGGAKGPGLFFILPCTDSFIKVDMRTISFDIPPQEILTKDSVTISVD
60 70 80 90 100 110
150 160 170 180 190 200
pF1KB5 ADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLKRPLREIQMEKLKISDQLLLEIN
. : .:. . .:.: .. . ..:::. ::... ..: . : .: .. .:. .. ..
CCDS68 GVVYYRVQNATLAVANITNADSATRLLAQTTLRNVLGTKNLSQILSDREEIAHNMQSTLD
120 130 140 150 160 170
210 220 230 240 250 260
pF1KB5 DVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDSTLQQLALHFLGGSMNSMAGGAPSPG
:.: :::..:.::: .. : : :
CCDS68 DATDAWGIKVERVE--IKDVKLPVQLQRAMAAEAEASREARAKVIAAEGEMNASRALKEA
180 190 200 210 220 230
>>CCDS45040.1 STOML3 gene_id:161003|Hs108|chr13 (282 aa)
initn: 274 init1: 274 opt: 427 Z-score: 427.0 bits: 87.4 E(32554): 1.8e-17
Smith-Waterman score: 427; 39.8% identity (73.5% similar) in 166 aa overlap (54-217:17-182)
30 40 50 60 70 80
pF1KB5 GFLGSQKGCLSPERGGVGTGADVPQSWPSCLCHGLISFLGFLLLLVTFPISGWFALKIVP
.: .. :.:::...::::: :. :::.
CCDS45 MNSRGELVGVNNKRLGVCGWILFSLSFLLVIITFPISIWMCLKIIK
10 20 30 40
90 100 110 120 130 140
pF1KB5 TYERMIVFRLGRIRTPQ--GPGMVLLLPFIDSFQRVDLRTRAFNVPPCKLASKDGAVLSV
::: .:::::::.. . :::..:.:: :: : .::::: . :.:: .. ..:... .:
CCDS45 EYERAVVFRLGRIQADKAKGPGLILVLPCIDVFVKVDLRTVTCNIPPQEILTRDSVTTQV
50 60 70 80 90 100
150 160 170 180 190 200
pF1KB5 GADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLKRPLREIQMEKLKISDQLLLEI
. : .::.. : .: .:.:.. :: . ::... ..: . : .: . .:. .. .
CCDS45 DGVVYYRIYSAVSAVANVNDVHQATFLLAQTTLRNVLGTQTLSQILAGREEIAHSIQTLL
110 120 130 140 150 160
210 220 230 240 250 260
pF1KB5 NDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDSTLQQLALHFLGGSMNSMAGGAPSP
.:.:. ::..: :::.
CCDS45 DDATELWGIRVARVEIKDVRIPVQLQRSMAAEAEATREARAKVLAAEGEMNASKSLKSAS
170 180 190 200 210 220
>>CCDS9367.1 STOML3 gene_id:161003|Hs108|chr13 (291 aa)
initn: 274 init1: 274 opt: 427 Z-score: 426.8 bits: 87.4 E(32554): 1.9e-17
Smith-Waterman score: 427; 39.8% identity (73.5% similar) in 166 aa overlap (54-217:26-191)
30 40 50 60 70 80
pF1KB5 GFLGSQKGCLSPERGGVGTGADVPQSWPSCLCHGLISFLGFLLLLVTFPISGWFALKIVP
.: .. :.:::...::::: :. :::.
CCDS93 MDSRVSSPEKQDKENFVGVNNKRLGVCGWILFSLSFLLVIITFPISIWMCLKIIK
10 20 30 40 50
90 100 110 120 130 140
pF1KB5 TYERMIVFRLGRIRTPQ--GPGMVLLLPFIDSFQRVDLRTRAFNVPPCKLASKDGAVLSV
::: .:::::::.. . :::..:.:: :: : .::::: . :.:: .. ..:... .:
CCDS93 EYERAVVFRLGRIQADKAKGPGLILVLPCIDVFVKVDLRTVTCNIPPQEILTRDSVTTQV
60 70 80 90 100 110
150 160 170 180 190 200
pF1KB5 GADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLKRPLREIQMEKLKISDQLLLEI
. : .::.. : .: .:.:.. :: . ::... ..: . : .: . .:. .. .
CCDS93 DGVVYYRIYSAVSAVANVNDVHQATFLLAQTTLRNVLGTQTLSQILAGREEIAHSIQTLL
120 130 140 150 160 170
210 220 230 240 250 260
pF1KB5 NDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDSTLQQLALHFLGGSMNSMAGGAPSP
.:.:. ::..: :::.
CCDS93 DDATELWGIRVARVEIKDVRIPVQLQRSMAAEAEATREARAKVLAAEGEMNASKSLKSAS
180 190 200 210 220 230
>>CCDS1331.1 NPHS2 gene_id:7827|Hs108|chr1 (383 aa)
initn: 350 init1: 243 opt: 375 Z-score: 374.1 bits: 78.0 E(32554): 1.6e-14
Smith-Waterman score: 375; 31.9% identity (73.5% similar) in 166 aa overlap (55-217:101-265)
30 40 50 60 70 80
pF1KB5 FLGSQKGCLSPERGGVGTGADVPQSWPSCLCHGLISFLGFLLLLVTFPISGWFALKIVPT
:. :. ....:....:::.: :: .:.:
CCDS13 RGSGEEGTEVVALLESERPEEGTKSSGLGACEWLLVLISLLFIIMTFPFSIWFCVKVVQE
80 90 100 110 120 130
90 100 110 120 130 140
pF1KB5 YERMIVFRLGRIRTP---QGPGMVLLLPFIDSFQRVDLRTRAFNVPPCKLASKDGAVLSV
:::.:.::::.. : .:::. ..:: .:....:::: .....: ....:: .. .
CCDS13 YERVIIFRLGHL-LPGRAKGPGLFFFLPCLDTYHKVDLRLQTLEIPFHEIVTKDMFIMEI
140 150 160 170 180
150 160 170 180 190 200
pF1KB5 GADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLKRPLREIQMEKLKISDQLLLEI
: .:. . : . .. .. :... .:..: . : .: : :: .:. .:... . .
CCDS13 DAICYYRMENASLLLSSLAHVSKAVQFLVQTTMKRLLAHRSLTEILLERKSIAQDAKVAL
190 200 210 220 230 240
210 220 230 240 250 260
pF1KB5 NDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDSTLQQLALHFLGGSMNSMAGGAPSP
..:: ::..:.:.:.
CCDS13 DSVTCIWGIKVERIEIKDVRLPAGLQHSLAVEAEAQRQAKVRMIAAEAEKAASESLRMAA
250 260 270 280 290 300
398 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 19:39:02 2016 done: Sat Nov 5 19:39:02 2016
Total Scan time: 2.980 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]