Result of FASTA (omim) for
pF1KB5185
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5185, 398 aa
1>>>pF1KB5185 398 - 398 aa - 398 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.8195+/-0.000309; mu= 10.6995+/- 0.019
mean_var=109.9381+/-22.270, 0's: 0 Z-trim(118.9): 40 B-trim: 0 in 0/54
Lambda= 0.122321
statistics sampled from 32219 (32259) to 32219 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.738), E-opt: 0.2 (0.378), width: 16
Scan time: 8.230
The best scores are: opt bits E(85289)
NP_004800 (OMIM: 608326) stomatin-like protein 1 i ( 398) 2643 476.8 3.9e-134
NP_001243601 (OMIM: 608326) stomatin-like protein ( 397) 2626 473.8 3.1e-133
NP_001311159 (OMIM: 608326) stomatin-like protein ( 356) 2336 422.6 7.2e-118
XP_005254849 (OMIM: 608326) PREDICTED: stomatin-li ( 356) 2336 422.6 7.2e-118
XP_006720836 (OMIM: 608326) PREDICTED: stomatin-li ( 355) 2319 419.6 5.8e-117
NP_001243606 (OMIM: 608326) stomatin-like protein ( 355) 2319 419.6 5.8e-117
NP_001311157 (OMIM: 608326) stomatin-like protein ( 311) 2027 368.1 1.7e-101
NP_001311156 (OMIM: 608326) stomatin-like protein ( 311) 2027 368.1 1.7e-101
NP_001243605 (OMIM: 608326) stomatin-like protein ( 310) 2010 365.1 1.3e-100
NP_001243604 (OMIM: 608326) stomatin-like protein ( 327) 1771 322.9 7e-88
NP_001243602 (OMIM: 608326) stomatin-like protein ( 348) 1735 316.6 6e-86
NP_001243603 (OMIM: 608326) stomatin-like protein ( 347) 1718 313.6 4.8e-85
NP_001311158 (OMIM: 608326) stomatin-like protein ( 242) 1561 285.8 7.8e-77
NP_001311155 (OMIM: 608326) stomatin-like protein ( 241) 1544 282.8 6.2e-76
NP_001257455 (OMIM: 133090,185000) erythrocyte ban ( 197) 435 87.0 4.3e-17
NP_004090 (OMIM: 133090,185000) erythrocyte band 7 ( 288) 436 87.3 5.2e-17
NP_001137505 (OMIM: 608327) stomatin-like protein ( 282) 427 85.7 1.5e-16
NP_660329 (OMIM: 608327) stomatin-like protein 3 i ( 291) 427 85.7 1.6e-16
NP_055440 (OMIM: 600995,604766) podocin isoform 1 ( 383) 375 76.6 1.1e-13
NP_001257456 (OMIM: 133090,185000) erythrocyte ban ( 168) 364 74.4 2.2e-13
XP_016875889 (OMIM: 608327) PREDICTED: stomatin-li ( 220) 254 55.1 1.9e-07
NP_001284504 (OMIM: 600995,604766) podocin isoform ( 315) 241 52.9 1.3e-06
XP_016857788 (OMIM: 600995,604766) PREDICTED: podo ( 178) 237 52.0 1.3e-06
XP_005245540 (OMIM: 600995,604766) PREDICTED: podo ( 324) 223 49.7 1.2e-05
NP_038470 (OMIM: 608292) stomatin-like protein 2, ( 356) 216 48.5 3e-05
NP_001007101 (OMIM: 184755,613724) non-specific li ( 140) 182 42.3 0.00089
XP_016857535 (OMIM: 184755,613724) PREDICTED: non- ( 143) 182 42.3 0.0009
NP_001007100 (OMIM: 184755,613724) non-specific li ( 143) 182 42.3 0.0009
NP_001273961 (OMIM: 608292) stomatin-like protein ( 305) 187 43.4 0.00092
NP_001180546 (OMIM: 184755,613724) non-specific li ( 466) 182 42.6 0.0024
NP_001180529 (OMIM: 184755,613724) non-specific li ( 503) 182 42.6 0.0026
NP_001180528 (OMIM: 184755,613724) non-specific li ( 523) 182 42.6 0.0027
NP_002970 (OMIM: 184755,613724) non-specific lipid ( 547) 182 42.6 0.0028
NP_001278957 (OMIM: 233400,261515,601860) peroxiso ( 596) 175 41.4 0.007
NP_001278956 (OMIM: 233400,261515,601860) peroxiso ( 712) 175 41.4 0.0081
NP_001186221 (OMIM: 233400,261515,601860) peroxiso ( 718) 175 41.4 0.0082
NP_000405 (OMIM: 233400,261515,601860) peroxisomal ( 736) 175 41.4 0.0083
NP_001186220 (OMIM: 233400,261515,601860) peroxiso ( 761) 175 41.5 0.0086
NP_001273962 (OMIM: 608292) stomatin-like protein ( 310) 168 40.0 0.0095
NP_001273960 (OMIM: 608292) stomatin-like protein ( 311) 168 40.0 0.0096
>>NP_004800 (OMIM: 608326) stomatin-like protein 1 isofo (398 aa)
initn: 2643 init1: 2643 opt: 2643 Z-score: 2529.2 bits: 476.8 E(85289): 3.9e-134
Smith-Waterman score: 2643; 100.0% identity (100.0% similar) in 398 aa overlap (1-398:1-398)
10 20 30 40 50 60
pF1KB5 MLGRSGYRALPLGDFDRFQQSSFGFLGSQKGCLSPERGGVGTGADVPQSWPSCLCHGLIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MLGRSGYRALPLGDFDRFQQSSFGFLGSQKGCLSPERGGVGTGADVPQSWPSCLCHGLIS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 FLGFLLLLVTFPISGWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 FLGFLLLLVTFPISGWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 TRAFNVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 TRAFNVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 RPLREIQMEKLKISDQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDSTLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 RPLREIQMEKLKISDQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDSTLQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 QLALHFLGGSMNSMAGGAPSPGPADTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTALQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 QLALHFLGGSMNSMAGGAPSPGPADTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTALQP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 FLSEALVSQVGACYQFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEADLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 FLSEALVSQVGACYQFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEADLR
310 320 330 340 350 360
370 380 390
pF1KB5 ALLCRELRPLGAYMSGRLKVKGDLAMAMKLEAVLRALK
::::::::::::::::::::::::::::::::::::::
NP_004 ALLCRELRPLGAYMSGRLKVKGDLAMAMKLEAVLRALK
370 380 390
>>NP_001243601 (OMIM: 608326) stomatin-like protein 1 is (397 aa)
initn: 2624 init1: 1771 opt: 2626 Z-score: 2513.0 bits: 473.8 E(85289): 3.1e-133
Smith-Waterman score: 2626; 99.7% identity (99.7% similar) in 398 aa overlap (1-398:1-397)
10 20 30 40 50 60
pF1KB5 MLGRSGYRALPLGDFDRFQQSSFGFLGSQKGCLSPERGGVGTGADVPQSWPSCLCHGLIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLGRSGYRALPLGDFDRFQQSSFGFLGSQKGCLSPERGGVGTGADVPQSWPSCLCHGLIS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 FLGFLLLLVTFPISGWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FLGFLLLLVTFPISGWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 TRAFNVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TRAFNVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 RPLREIQMEKLKISDQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDSTLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RPLREIQMEKLKISDQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDSTLQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 QLALHFLGGSMNSMAGGAPSPGPADTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTALQP
::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::
NP_001 QLALHFLGGSMNSMAGGAPSPGP-DTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTALQP
250 260 270 280 290
310 320 330 340 350 360
pF1KB5 FLSEALVSQVGACYQFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEADLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FLSEALVSQVGACYQFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEADLR
300 310 320 330 340 350
370 380 390
pF1KB5 ALLCRELRPLGAYMSGRLKVKGDLAMAMKLEAVLRALK
::::::::::::::::::::::::::::::::::::::
NP_001 ALLCRELRPLGAYMSGRLKVKGDLAMAMKLEAVLRALK
360 370 380 390
>>NP_001311159 (OMIM: 608326) stomatin-like protein 1 is (356 aa)
initn: 2336 init1: 2336 opt: 2336 Z-score: 2237.1 bits: 422.6 E(85289): 7.2e-118
Smith-Waterman score: 2336; 100.0% identity (100.0% similar) in 354 aa overlap (45-398:3-356)
20 30 40 50 60 70
pF1KB5 FDRFQQSSFGFLGSQKGCLSPERGGVGTGADVPQSWPSCLCHGLISFLGFLLLLVTFPIS
::::::::::::::::::::::::::::::
NP_001 MPDVPQSWPSCLCHGLISFLGFLLLLVTFPIS
10 20 30
80 90 100 110 120 130
pF1KB5 GWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLRTRAFNVPPCKLASK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLRTRAFNVPPCKLASK
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB5 DGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLKRPLREIQMEKLKIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLKRPLREIQMEKLKIS
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB5 DQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDSTLQQLALHFLGGSMNSM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDSTLQQLALHFLGGSMNSM
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB5 AGGAPSPGPADTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTALQPFLSEALVSQVGACY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AGGAPSPGPADTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTALQPFLSEALVSQVGACY
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB5 QFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEADLRALLCRELRPLGAYM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEADLRALLCRELRPLGAYM
280 290 300 310 320 330
380 390
pF1KB5 SGRLKVKGDLAMAMKLEAVLRALK
::::::::::::::::::::::::
NP_001 SGRLKVKGDLAMAMKLEAVLRALK
340 350
>>XP_005254849 (OMIM: 608326) PREDICTED: stomatin-like p (356 aa)
initn: 2336 init1: 2336 opt: 2336 Z-score: 2237.1 bits: 422.6 E(85289): 7.2e-118
Smith-Waterman score: 2336; 100.0% identity (100.0% similar) in 354 aa overlap (45-398:3-356)
20 30 40 50 60 70
pF1KB5 FDRFQQSSFGFLGSQKGCLSPERGGVGTGADVPQSWPSCLCHGLISFLGFLLLLVTFPIS
::::::::::::::::::::::::::::::
XP_005 MPDVPQSWPSCLCHGLISFLGFLLLLVTFPIS
10 20 30
80 90 100 110 120 130
pF1KB5 GWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLRTRAFNVPPCKLASK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLRTRAFNVPPCKLASK
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB5 DGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLKRPLREIQMEKLKIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLKRPLREIQMEKLKIS
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB5 DQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDSTLQQLALHFLGGSMNSM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDSTLQQLALHFLGGSMNSM
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB5 AGGAPSPGPADTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTALQPFLSEALVSQVGACY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AGGAPSPGPADTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTALQPFLSEALVSQVGACY
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB5 QFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEADLRALLCRELRPLGAYM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEADLRALLCRELRPLGAYM
280 290 300 310 320 330
380 390
pF1KB5 SGRLKVKGDLAMAMKLEAVLRALK
::::::::::::::::::::::::
XP_005 SGRLKVKGDLAMAMKLEAVLRALK
340 350
>>XP_006720836 (OMIM: 608326) PREDICTED: stomatin-like p (355 aa)
initn: 2317 init1: 1464 opt: 2319 Z-score: 2220.9 bits: 419.6 E(85289): 5.8e-117
Smith-Waterman score: 2319; 99.7% identity (99.7% similar) in 354 aa overlap (45-398:3-355)
20 30 40 50 60 70
pF1KB5 FDRFQQSSFGFLGSQKGCLSPERGGVGTGADVPQSWPSCLCHGLISFLGFLLLLVTFPIS
::::::::::::::::::::::::::::::
XP_006 MPDVPQSWPSCLCHGLISFLGFLLLLVTFPIS
10 20 30
80 90 100 110 120 130
pF1KB5 GWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLRTRAFNVPPCKLASK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLRTRAFNVPPCKLASK
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB5 DGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLKRPLREIQMEKLKIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLKRPLREIQMEKLKIS
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB5 DQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDSTLQQLALHFLGGSMNSM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDSTLQQLALHFLGGSMNSM
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB5 AGGAPSPGPADTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTALQPFLSEALVSQVGACY
::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AGGAPSPGP-DTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTALQPFLSEALVSQVGACY
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB5 QFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEADLRALLCRELRPLGAYM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEADLRALLCRELRPLGAYM
280 290 300 310 320 330
380 390
pF1KB5 SGRLKVKGDLAMAMKLEAVLRALK
::::::::::::::::::::::::
XP_006 SGRLKVKGDLAMAMKLEAVLRALK
340 350
>>NP_001243606 (OMIM: 608326) stomatin-like protein 1 is (355 aa)
initn: 2317 init1: 1464 opt: 2319 Z-score: 2220.9 bits: 419.6 E(85289): 5.8e-117
Smith-Waterman score: 2319; 99.7% identity (99.7% similar) in 354 aa overlap (45-398:3-355)
20 30 40 50 60 70
pF1KB5 FDRFQQSSFGFLGSQKGCLSPERGGVGTGADVPQSWPSCLCHGLISFLGFLLLLVTFPIS
::::::::::::::::::::::::::::::
NP_001 MPDVPQSWPSCLCHGLISFLGFLLLLVTFPIS
10 20 30
80 90 100 110 120 130
pF1KB5 GWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLRTRAFNVPPCKLASK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLRTRAFNVPPCKLASK
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB5 DGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLKRPLREIQMEKLKIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLKRPLREIQMEKLKIS
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB5 DQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDSTLQQLALHFLGGSMNSM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDSTLQQLALHFLGGSMNSM
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB5 AGGAPSPGPADTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTALQPFLSEALVSQVGACY
::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AGGAPSPGP-DTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTALQPFLSEALVSQVGACY
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB5 QFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEADLRALLCRELRPLGAYM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEADLRALLCRELRPLGAYM
280 290 300 310 320 330
380 390
pF1KB5 SGRLKVKGDLAMAMKLEAVLRALK
::::::::::::::::::::::::
NP_001 SGRLKVKGDLAMAMKLEAVLRALK
340 350
>>NP_001311157 (OMIM: 608326) stomatin-like protein 1 31 (311 aa)
initn: 2027 init1: 2027 opt: 2027 Z-score: 1943.3 bits: 368.1 E(85289): 1.7e-101
Smith-Waterman score: 2027; 100.0% identity (100.0% similar) in 311 aa overlap (88-398:1-311)
60 70 80 90 100 110
pF1KB5 LISFLGFLLLLVTFPISGWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRV
::::::::::::::::::::::::::::::
NP_001 MIVFRLGRIRTPQGPGMVLLLPFIDSFQRV
10 20 30
120 130 140 150 160 170
pF1KB5 DLRTRAFNVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLRTRAFNVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKA
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB5 LLKRPLREIQMEKLKISDQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLKRPLREIQMEKLKISDQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDS
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB5 TLQQLALHFLGGSMNSMAGGAPSPGPADTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLQQLALHFLGGSMNSMAGGAPSPGPADTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTA
160 170 180 190 200 210
300 310 320 330 340 350
pF1KB5 LQPFLSEALVSQVGACYQFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQPFLSEALVSQVGACYQFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEA
220 230 240 250 260 270
360 370 380 390
pF1KB5 DLRALLCRELRPLGAYMSGRLKVKGDLAMAMKLEAVLRALK
:::::::::::::::::::::::::::::::::::::::::
NP_001 DLRALLCRELRPLGAYMSGRLKVKGDLAMAMKLEAVLRALK
280 290 300 310
>>NP_001311156 (OMIM: 608326) stomatin-like protein 1 is (311 aa)
initn: 2027 init1: 2027 opt: 2027 Z-score: 1943.3 bits: 368.1 E(85289): 1.7e-101
Smith-Waterman score: 2027; 100.0% identity (100.0% similar) in 311 aa overlap (88-398:1-311)
60 70 80 90 100 110
pF1KB5 LISFLGFLLLLVTFPISGWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRV
::::::::::::::::::::::::::::::
NP_001 MIVFRLGRIRTPQGPGMVLLLPFIDSFQRV
10 20 30
120 130 140 150 160 170
pF1KB5 DLRTRAFNVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLRTRAFNVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKA
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB5 LLKRPLREIQMEKLKISDQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLKRPLREIQMEKLKISDQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDS
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB5 TLQQLALHFLGGSMNSMAGGAPSPGPADTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLQQLALHFLGGSMNSMAGGAPSPGPADTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTA
160 170 180 190 200 210
300 310 320 330 340 350
pF1KB5 LQPFLSEALVSQVGACYQFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQPFLSEALVSQVGACYQFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEA
220 230 240 250 260 270
360 370 380 390
pF1KB5 DLRALLCRELRPLGAYMSGRLKVKGDLAMAMKLEAVLRALK
:::::::::::::::::::::::::::::::::::::::::
NP_001 DLRALLCRELRPLGAYMSGRLKVKGDLAMAMKLEAVLRALK
280 290 300 310
>>NP_001243605 (OMIM: 608326) stomatin-like protein 1 is (310 aa)
initn: 2008 init1: 1155 opt: 2010 Z-score: 1927.1 bits: 365.1 E(85289): 1.3e-100
Smith-Waterman score: 2010; 99.7% identity (99.7% similar) in 311 aa overlap (88-398:1-310)
60 70 80 90 100 110
pF1KB5 LISFLGFLLLLVTFPISGWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRV
::::::::::::::::::::::::::::::
NP_001 MIVFRLGRIRTPQGPGMVLLLPFIDSFQRV
10 20 30
120 130 140 150 160 170
pF1KB5 DLRTRAFNVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLRTRAFNVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKA
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB5 LLKRPLREIQMEKLKISDQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLKRPLREIQMEKLKISDQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDS
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB5 TLQQLALHFLGGSMNSMAGGAPSPGPADTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTA
:::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::
NP_001 TLQQLALHFLGGSMNSMAGGAPSPGP-DTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTA
160 170 180 190 200
300 310 320 330 340 350
pF1KB5 LQPFLSEALVSQVGACYQFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQPFLSEALVSQVGACYQFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEA
210 220 230 240 250 260
360 370 380 390
pF1KB5 DLRALLCRELRPLGAYMSGRLKVKGDLAMAMKLEAVLRALK
:::::::::::::::::::::::::::::::::::::::::
NP_001 DLRALLCRELRPLGAYMSGRLKVKGDLAMAMKLEAVLRALK
270 280 290 300 310
>>NP_001243604 (OMIM: 608326) stomatin-like protein 1 is (327 aa)
initn: 2174 init1: 1771 opt: 1771 Z-score: 1698.8 bits: 322.9 E(85289): 7e-88
Smith-Waterman score: 2036; 82.2% identity (82.2% similar) in 398 aa overlap (1-398:1-327)
10 20 30 40 50 60
pF1KB5 MLGRSGYRALPLGDFDRFQQSSFGFLGSQKGCLSPERGGVGTGADVPQSWPSCLCHGLIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLGRSGYRALPLGDFDRFQQSSFGFLGSQKGCLSPERGGVGTGADVPQSWPSCLCHGLIS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 FLGFLLLLVTFPISGWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FLGFLLLLVTFPISGWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 TRAFNVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TRAFNVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 RPLREIQMEKLKISDQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDSTLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RPLREIQMEKLKISDQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDSTLQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 QLALHFLGGSMNSMAGGAPSPGPADTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTALQP
:::::::::::::::::::::::
NP_001 QLALHFLGGSMNSMAGGAPSPGP-------------------------------------
250 260
310 320 330 340 350 360
pF1KB5 FLSEALVSQVGACYQFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEADLR
::::::::::::::::::::::::::
NP_001 ----------------------------------GRGRVGHGVPDGIPDVVVEMAEADLR
270 280
370 380 390
pF1KB5 ALLCRELRPLGAYMSGRLKVKGDLAMAMKLEAVLRALK
::::::::::::::::::::::::::::::::::::::
NP_001 ALLCRELRPLGAYMSGRLKVKGDLAMAMKLEAVLRALK
290 300 310 320
398 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 19:39:03 2016 done: Sat Nov 5 19:39:04 2016
Total Scan time: 8.230 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]