Result of FASTA (omim) for
pF1KB5186
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5186, 281 aa
1>>>pF1KB5186 281 - 281 aa - 281 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0193+/-0.000383; mu= 18.4376+/- 0.024
mean_var=92.7622+/-19.259, 0's: 0 Z-trim(116.3): 310 B-trim: 1607 in 2/50
Lambda= 0.133165
statistics sampled from 26940 (27335) to 26940 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.684), E-opt: 0.2 (0.32), width: 16
Scan time: 6.100
The best scores are: opt bits E(85289)
NP_057168 (OMIM: 605550) dexamethasone-induced Ras ( 281) 1867 368.4 8.2e-102
XP_016884190 (OMIM: 612842) PREDICTED: GTP-binding ( 278) 1020 205.7 7.9e-53
XP_016884191 (OMIM: 612842) PREDICTED: GTP-binding ( 266) 1015 204.7 1.5e-52
XP_005261499 (OMIM: 612842) PREDICTED: GTP-binding ( 266) 1015 204.7 1.5e-52
NP_055125 (OMIM: 612842) GTP-binding protein Rhes ( 266) 1015 204.7 1.5e-52
XP_011528342 (OMIM: 612842) PREDICTED: GTP-binding ( 266) 1015 204.7 1.5e-52
NP_001186918 (OMIM: 605550) dexamethasone-induced ( 122) 624 129.2 3.6e-30
NP_660156 (OMIM: 607862) GTP-binding protein Di-Ra ( 198) 366 79.9 4.2e-15
XP_011526015 (OMIM: 607862) PREDICTED: GTP-binding ( 232) 366 80.0 4.6e-15
NP_060064 (OMIM: 607863) GTP-binding protein Di-Ra ( 199) 358 78.4 1.2e-14
NP_036382 (OMIM: 600098) ras-related protein R-Ras ( 204) 341 75.1 1.2e-13
NP_066361 (OMIM: 179540) ras-related protein Rap-2 ( 183) 334 73.7 2.8e-13
NP_002877 (OMIM: 179541) ras-related protein Rap-2 ( 183) 332 73.3 3.7e-13
NP_001010942 (OMIM: 179530) ras-related protein Ra ( 184) 318 70.7 2.4e-12
NP_056461 (OMIM: 179530) ras-related protein Rap-1 ( 184) 318 70.7 2.4e-12
NP_789765 (OMIM: 109800,137550,162900,163200,18847 ( 170) 317 70.4 2.6e-12
NP_006261 (OMIM: 165090) ras-related protein R-Ras ( 218) 318 70.7 2.7e-12
NP_004976 (OMIM: 109800,114480,137215,163200,19007 ( 188) 317 70.5 2.8e-12
XP_011518955 (OMIM: 109800,114480,137215,163200,19 ( 188) 317 70.5 2.8e-12
NP_005334 (OMIM: 109800,137550,162900,163200,18847 ( 189) 317 70.5 2.8e-12
NP_203524 (OMIM: 109800,114480,137215,163200,19007 ( 189) 317 70.5 2.8e-12
NP_001123914 (OMIM: 109800,137550,162900,163200,18 ( 189) 317 70.5 2.8e-12
XP_006719132 (OMIM: 109800,114480,137215,163200,19 ( 189) 317 70.5 2.8e-12
XP_016857453 (OMIM: 179520) PREDICTED: ras-related ( 184) 316 70.3 3.1e-12
NP_001010935 (OMIM: 179520) ras-related protein Ra ( 184) 316 70.3 3.1e-12
NP_001278825 (OMIM: 179520) ras-related protein Ra ( 184) 316 70.3 3.1e-12
NP_002875 (OMIM: 179520) ras-related protein Rap-1 ( 184) 316 70.3 3.1e-12
XP_016857451 (OMIM: 179520) PREDICTED: ras-related ( 184) 316 70.3 3.1e-12
XP_016857452 (OMIM: 179520) PREDICTED: ras-related ( 184) 316 70.3 3.1e-12
XP_016874782 (OMIM: 109800,114480,137215,163200,19 ( 227) 317 70.6 3.1e-12
XP_016857449 (OMIM: 179520) PREDICTED: ras-related ( 195) 316 70.3 3.2e-12
XP_016857450 (OMIM: 179520) PREDICTED: ras-related ( 195) 316 70.3 3.2e-12
NP_002515 (OMIM: 114500,137550,162900,163200,16479 ( 189) 305 68.2 1.4e-11
NP_002921 (OMIM: 609592) GTP-binding protein Rit2 ( 217) 301 67.5 2.5e-11
NP_008843 (OMIM: 609591,615355) GTP-binding protei ( 219) 300 67.3 2.9e-11
NP_001243750 (OMIM: 609591,615355) GTP-binding pro ( 236) 300 67.3 3.1e-11
NP_001259006 (OMIM: 609592) GTP-binding protein Ri ( 153) 288 64.8 1.1e-10
XP_016860111 (OMIM: 179551) PREDICTED: ras-related ( 206) 284 64.2 2.4e-10
XP_005263784 (OMIM: 179551) PREDICTED: ras-related ( 206) 284 64.2 2.4e-10
XP_005263785 (OMIM: 179551) PREDICTED: ras-related ( 206) 284 64.2 2.4e-10
NP_002872 (OMIM: 179551) ras-related protein Ral-B ( 206) 284 64.2 2.4e-10
XP_005263786 (OMIM: 179551) PREDICTED: ras-related ( 206) 284 64.2 2.4e-10
XP_005263781 (OMIM: 179551) PREDICTED: ras-related ( 228) 284 64.2 2.5e-10
XP_016860110 (OMIM: 179551) PREDICTED: ras-related ( 228) 284 64.2 2.5e-10
XP_011509875 (OMIM: 179551) PREDICTED: ras-related ( 229) 284 64.2 2.5e-10
XP_005247286 (OMIM: 608435) PREDICTED: ras-related ( 170) 282 63.7 2.7e-10
NP_001239019 (OMIM: 608435) ras-related protein M- ( 208) 282 63.8 3.1e-10
NP_001078518 (OMIM: 608435) ras-related protein M- ( 208) 282 63.8 3.1e-10
XP_016861376 (OMIM: 608435) PREDICTED: ras-related ( 208) 282 63.8 3.1e-10
NP_036351 (OMIM: 608435) ras-related protein M-Ras ( 208) 282 63.8 3.1e-10
>>NP_057168 (OMIM: 605550) dexamethasone-induced Ras-rel (281 aa)
initn: 1867 init1: 1867 opt: 1867 Z-score: 1948.8 bits: 368.4 E(85289): 8.2e-102
Smith-Waterman score: 1867; 100.0% identity (100.0% similar) in 281 aa overlap (1-281:1-281)
10 20 30 40 50 60
pF1KB5 MKLAAMIKKMCPSDSELSIPAKNCYRMVILGSSKVGKTAIVSRFLTGRFEDAYTPTIEDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MKLAAMIKKMCPSDSELSIPAKNCYRMVILGSSKVGKTAIVSRFLTGRFEDAYTPTIEDF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 HRKFYSIRGEVYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRDSFEEVQRLRQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 HRKFYSIRGEVYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRDSFEEVQRLRQQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 ILDTKSCLKNKTKENVDVPLVICGNKGDRDFYREVDQREIEQLVGDDPQRCAYFEISAKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 ILDTKSCLKNKTKENVDVPLVICGNKGDRDFYREVDQREIEQLVGDDPQRCAYFEISAKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 NSSLDQMFRALFAMAKLPSEMSPDLHRKVSVQYCDVLHKKALRNKKLLRAGSGGGGGDPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 NSSLDQMFRALFAMAKLPSEMSPDLHRKVSVQYCDVLHKKALRNKKLLRAGSGGGGGDPG
190 200 210 220 230 240
250 260 270 280
pF1KB5 DAFGIVAPFARRPSVHSDLMYIREKASAGSQAKDKERCVIS
:::::::::::::::::::::::::::::::::::::::::
NP_057 DAFGIVAPFARRPSVHSDLMYIREKASAGSQAKDKERCVIS
250 260 270 280
>>XP_016884190 (OMIM: 612842) PREDICTED: GTP-binding pro (278 aa)
initn: 1134 init1: 985 opt: 1020 Z-score: 1069.4 bits: 205.7 E(85289): 7.9e-53
Smith-Waterman score: 1148; 62.1% identity (84.1% similar) in 277 aa overlap (5-280:12-277)
10 20 30 40 50
pF1KB5 MKLAAMIKKMCPSDSELSIPAKNCYRMVILGSSKVGKTAIVSRFLTGRFEDAY
::.: . .. ::.:::: ::::.::.:.:::..::::::.::::: :
XP_016 MPASLALLQPRAMMKTLSSGNCTLSVPAKNSYRMVVLGASRVGKSSIVSRFLNGRFEDQY
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 TPTIEDFHRKFYSIRGEVYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRDSFEE
:::::::::: :.:::..:::::::::::::::::::::::::::::::::::::.::.:
XP_016 TPTIEDFHRKVYNIRGDMYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRESFDE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 VQRLRQQILDTKSCLKNKTKENVDVPLVICGNKGDR-DFYREVDQREIEQLVGDDPQRCA
:.::..:::..:::::::::: ...:.::::::.:. .. :.: : : ::. : . ::
XP_016 VKRLQKQILEVKSCLKNKTKEAAELPMVICGNKNDHGELCRQVPTTEAELLVSGD-ENCA
130 140 150 160 170
180 190 200 210 220 230
pF1KB5 YFEISAKKNSSLDQMFRALFAMAKLPSEMSPDLHRKVSVQYCDVLHKKALRNKKLLRAGS
:::.:::::...:.:: .::.::::: :::: ::::.:::: :..: . . ... .
XP_016 YFEVSAKKNTNVDEMFYVLFSMAKLPHEMSPALHRKISVQYGDAFHPRPFCMRRVKEM--
180 190 200 210 220 230
240 250 260 270 280
pF1KB5 GGGGGDPGDAFGIVAPFARRPSVHSDLMYIREKASAGSQAKDKERCVIS
::.:.:.::::::::.::: ::. :. .::.....:.:
XP_016 --------DAYGMVSPFARRPSVNSDLKYIKAKVLREGQARERDKCTIQ
240 250 260 270
>>XP_016884191 (OMIM: 612842) PREDICTED: GTP-binding pro (266 aa)
initn: 1129 init1: 980 opt: 1015 Z-score: 1064.5 bits: 204.7 E(85289): 1.5e-52
Smith-Waterman score: 1143; 62.0% identity (84.1% similar) in 276 aa overlap (6-280:1-265)
10 20 30 40 50 60
pF1KB5 MKLAAMIKKMCPSDSELSIPAKNCYRMVILGSSKVGKTAIVSRFLTGRFEDAYTPTIEDF
:.: . .. ::.:::: ::::.::.:.:::..::::::.::::: ::::::::
XP_016 MMKTLSSGNCTLSVPAKNSYRMVVLGASRVGKSSIVSRFLNGRFEDQYTPTIEDF
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 HRKFYSIRGEVYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRDSFEEVQRLRQQ
::: :.:::..:::::::::::::::::::::::::::::::::::::.::.::.::..:
XP_016 HRKVYNIRGDMYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRESFDEVKRLQKQ
60 70 80 90 100 110
130 140 150 160 170
pF1KB5 ILDTKSCLKNKTKENVDVPLVICGNKGDR-DFYREVDQREIEQLVGDDPQRCAYFEISAK
::..:::::::::: ...:.::::::.:. .. :.: : : ::. : . :::::.:::
XP_016 ILEVKSCLKNKTKEAAELPMVICGNKNDHGELCRQVPTTEAELLVSGD-ENCAYFEVSAK
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 KNSSLDQMFRALFAMAKLPSEMSPDLHRKVSVQYCDVLHKKALRNKKLLRAGSGGGGGDP
::...:.:: .::.::::: :::: ::::.:::: :..: . . ... .
XP_016 KNTNVDEMFYVLFSMAKLPHEMSPALHRKISVQYGDAFHPRPFCMRRVKEM---------
180 190 200 210 220
240 250 260 270 280
pF1KB5 GDAFGIVAPFARRPSVHSDLMYIREKASAGSQAKDKERCVIS
::.:.:.::::::::.::: ::. :. .::.....:.:
XP_016 -DAYGMVSPFARRPSVNSDLKYIKAKVLREGQARERDKCTIQ
230 240 250 260
>>XP_005261499 (OMIM: 612842) PREDICTED: GTP-binding pro (266 aa)
initn: 1129 init1: 980 opt: 1015 Z-score: 1064.5 bits: 204.7 E(85289): 1.5e-52
Smith-Waterman score: 1143; 62.0% identity (84.1% similar) in 276 aa overlap (6-280:1-265)
10 20 30 40 50 60
pF1KB5 MKLAAMIKKMCPSDSELSIPAKNCYRMVILGSSKVGKTAIVSRFLTGRFEDAYTPTIEDF
:.: . .. ::.:::: ::::.::.:.:::..::::::.::::: ::::::::
XP_005 MMKTLSSGNCTLSVPAKNSYRMVVLGASRVGKSSIVSRFLNGRFEDQYTPTIEDF
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 HRKFYSIRGEVYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRDSFEEVQRLRQQ
::: :.:::..:::::::::::::::::::::::::::::::::::::.::.::.::..:
XP_005 HRKVYNIRGDMYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRESFDEVKRLQKQ
60 70 80 90 100 110
130 140 150 160 170
pF1KB5 ILDTKSCLKNKTKENVDVPLVICGNKGDR-DFYREVDQREIEQLVGDDPQRCAYFEISAK
::..:::::::::: ...:.::::::.:. .. :.: : : ::. : . :::::.:::
XP_005 ILEVKSCLKNKTKEAAELPMVICGNKNDHGELCRQVPTTEAELLVSGD-ENCAYFEVSAK
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 KNSSLDQMFRALFAMAKLPSEMSPDLHRKVSVQYCDVLHKKALRNKKLLRAGSGGGGGDP
::...:.:: .::.::::: :::: ::::.:::: :..: . . ... .
XP_005 KNTNVDEMFYVLFSMAKLPHEMSPALHRKISVQYGDAFHPRPFCMRRVKEM---------
180 190 200 210 220
240 250 260 270 280
pF1KB5 GDAFGIVAPFARRPSVHSDLMYIREKASAGSQAKDKERCVIS
::.:.:.::::::::.::: ::. :. .::.....:.:
XP_005 -DAYGMVSPFARRPSVNSDLKYIKAKVLREGQARERDKCTIQ
230 240 250 260
>>NP_055125 (OMIM: 612842) GTP-binding protein Rhes [Hom (266 aa)
initn: 1129 init1: 980 opt: 1015 Z-score: 1064.5 bits: 204.7 E(85289): 1.5e-52
Smith-Waterman score: 1143; 62.0% identity (84.1% similar) in 276 aa overlap (6-280:1-265)
10 20 30 40 50 60
pF1KB5 MKLAAMIKKMCPSDSELSIPAKNCYRMVILGSSKVGKTAIVSRFLTGRFEDAYTPTIEDF
:.: . .. ::.:::: ::::.::.:.:::..::::::.::::: ::::::::
NP_055 MMKTLSSGNCTLSVPAKNSYRMVVLGASRVGKSSIVSRFLNGRFEDQYTPTIEDF
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 HRKFYSIRGEVYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRDSFEEVQRLRQQ
::: :.:::..:::::::::::::::::::::::::::::::::::::.::.::.::..:
NP_055 HRKVYNIRGDMYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRESFDEVKRLQKQ
60 70 80 90 100 110
130 140 150 160 170
pF1KB5 ILDTKSCLKNKTKENVDVPLVICGNKGDR-DFYREVDQREIEQLVGDDPQRCAYFEISAK
::..:::::::::: ...:.::::::.:. .. :.: : : ::. : . :::::.:::
NP_055 ILEVKSCLKNKTKEAAELPMVICGNKNDHGELCRQVPTTEAELLVSGD-ENCAYFEVSAK
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 KNSSLDQMFRALFAMAKLPSEMSPDLHRKVSVQYCDVLHKKALRNKKLLRAGSGGGGGDP
::...:.:: .::.::::: :::: ::::.:::: :..: . . ... .
NP_055 KNTNVDEMFYVLFSMAKLPHEMSPALHRKISVQYGDAFHPRPFCMRRVKEM---------
180 190 200 210 220
240 250 260 270 280
pF1KB5 GDAFGIVAPFARRPSVHSDLMYIREKASAGSQAKDKERCVIS
::.:.:.::::::::.::: ::. :. .::.....:.:
NP_055 -DAYGMVSPFARRPSVNSDLKYIKAKVLREGQARERDKCTIQ
230 240 250 260
>>XP_011528342 (OMIM: 612842) PREDICTED: GTP-binding pro (266 aa)
initn: 1129 init1: 980 opt: 1015 Z-score: 1064.5 bits: 204.7 E(85289): 1.5e-52
Smith-Waterman score: 1143; 62.0% identity (84.1% similar) in 276 aa overlap (6-280:1-265)
10 20 30 40 50 60
pF1KB5 MKLAAMIKKMCPSDSELSIPAKNCYRMVILGSSKVGKTAIVSRFLTGRFEDAYTPTIEDF
:.: . .. ::.:::: ::::.::.:.:::..::::::.::::: ::::::::
XP_011 MMKTLSSGNCTLSVPAKNSYRMVVLGASRVGKSSIVSRFLNGRFEDQYTPTIEDF
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 HRKFYSIRGEVYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRDSFEEVQRLRQQ
::: :.:::..:::::::::::::::::::::::::::::::::::::.::.::.::..:
XP_011 HRKVYNIRGDMYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRESFDEVKRLQKQ
60 70 80 90 100 110
130 140 150 160 170
pF1KB5 ILDTKSCLKNKTKENVDVPLVICGNKGDR-DFYREVDQREIEQLVGDDPQRCAYFEISAK
::..:::::::::: ...:.::::::.:. .. :.: : : ::. : . :::::.:::
XP_011 ILEVKSCLKNKTKEAAELPMVICGNKNDHGELCRQVPTTEAELLVSGD-ENCAYFEVSAK
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 KNSSLDQMFRALFAMAKLPSEMSPDLHRKVSVQYCDVLHKKALRNKKLLRAGSGGGGGDP
::...:.:: .::.::::: :::: ::::.:::: :..: . . ... .
XP_011 KNTNVDEMFYVLFSMAKLPHEMSPALHRKISVQYGDAFHPRPFCMRRVKEM---------
180 190 200 210 220
240 250 260 270 280
pF1KB5 GDAFGIVAPFARRPSVHSDLMYIREKASAGSQAKDKERCVIS
::.:.:.::::::::.::: ::. :. .::.....:.:
XP_011 -DAYGMVSPFARRPSVNSDLKYIKAKVLREGQARERDKCTIQ
230 240 250 260
>>NP_001186918 (OMIM: 605550) dexamethasone-induced Ras- (122 aa)
initn: 624 init1: 624 opt: 624 Z-score: 662.6 bits: 129.2 E(85289): 3.6e-30
Smith-Waterman score: 624; 100.0% identity (100.0% similar) in 95 aa overlap (1-95:1-95)
10 20 30 40 50 60
pF1KB5 MKLAAMIKKMCPSDSELSIPAKNCYRMVILGSSKVGKTAIVSRFLTGRFEDAYTPTIEDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MKLAAMIKKMCPSDSELSIPAKNCYRMVILGSSKVGKTAIVSRFLTGRFEDAYTPTIEDF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 HRKFYSIRGEVYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRDSFEEVQRLRQQ
:::::::::::::::::::::::::::::::::::
NP_001 HRKFYSIRGEVYQLDILDTSGNHPFPAMRRLSILTDPRHQVLPQEQNQGERGRAPGHLRQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 ILDTKSCLKNKTKENVDVPLVICGNKGDRDFYREVDQREIEQLVGDDPQRCAYFEISAKK
NP_001 QG
>>NP_660156 (OMIM: 607862) GTP-binding protein Di-Ras1 [ (198 aa)
initn: 381 init1: 301 opt: 366 Z-score: 392.2 bits: 79.9 E(85289): 4.2e-15
Smith-Waterman score: 423; 41.2% identity (70.6% similar) in 177 aa overlap (19-194:1-167)
10 20 30 40 50
pF1KB5 MKLAAMIKKMCPSDSELSIPAK-NCYRMVILGSSKVGKTAIVSRFLTGRFEDAYTPTIED
.: . : ::.:..:.. :::...: ::. : :.:.: :::::
NP_660 MPEQSNDYRVVVFGAGGVGKSSLVLRFVKGTFRDTYIPTIED
10 20 30 40
60 70 80 90 100 110
pF1KB5 FHRKFYSIRGEVYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRDSFEEVQRLRQ
.:. : : :.: ::.:.: ::::.:::: : .::::::. ...:.::. . .
NP_660 TYRQVISCDKSVCTLQITDTTGSHQFPAMQRLSISKGHAFILVFSVTSKQSLEELGPIYK
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB5 QILDTKSCLKNKTKENVDVPLVICGNKGDRDFYREVDQREIEQLVGDDPQRCAYFEISAK
:.. :. .. :.:... ::: : . :::: :: : :... .::..: :::
NP_660 LIVQIKGSVE-------DIPVMLVGNKCD-ETQREVDTREA-QAVAQE-WKCAFMETSAK
110 120 130 140 150
180 190 200 210 220 230
pF1KB5 KNSSLDQMFRALFAMAKLPSEMSPDLHRKVSVQYCDVLHKKALRNKKLLRAGSGGGGGDP
: .. ..:. :...
NP_660 MNYNVKELFQELLTLETRRNMSLNIDGKRSGKQKRTDRVKGKCTLM
160 170 180 190
>>XP_011526015 (OMIM: 607862) PREDICTED: GTP-binding pro (232 aa)
initn: 381 init1: 301 opt: 366 Z-score: 391.4 bits: 80.0 E(85289): 4.6e-15
Smith-Waterman score: 423; 41.2% identity (70.6% similar) in 177 aa overlap (19-194:35-201)
10 20 30 40
pF1KB5 MKLAAMIKKMCPSDSELSIPAK-NCYRMVILGSSKVGKTAIVSRFLTG
.: . : ::.:..:.. :::...: ::. :
XP_011 QGLRARQARSGVLAAGTSPPGPGRPPAAGKMPEQSNDYRVVVFGAGGVGKSSLVLRFVKG
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB5 RFEDAYTPTIEDFHRKFYSIRGEVYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDN
:.:.: ::::: .:. : : :.: ::.:.: ::::.:::: : .::::::. .
XP_011 TFRDTYIPTIEDTYRQVISCDKSVCTLQITDTTGSHQFPAMQRLSISKGHAFILVFSVTS
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB5 RDSFEEVQRLRQQILDTKSCLKNKTKENVDVPLVICGNKGDRDFYREVDQREIEQLVGDD
..:.::. . . :.. :. .. :.:... ::: : . :::: :: : :...
XP_011 KQSLEELGPIYKLIVQIKGSVE-------DIPVMLVGNKCD-ETQREVDTREA-QAVAQE
130 140 150 160 170
170 180 190 200 210 220
pF1KB5 PQRCAYFEISAKKNSSLDQMFRALFAMAKLPSEMSPDLHRKVSVQYCDVLHKKALRNKKL
.::..: ::: : .. ..:. :...
XP_011 -WKCAFMETSAKMNYNVKELFQELLTLETRRNMSLNIDGKRSGKQKRTDRVKGKCTLM
180 190 200 210 220 230
>>NP_060064 (OMIM: 607863) GTP-binding protein Di-Ras2 [ (199 aa)
initn: 424 init1: 309 opt: 358 Z-score: 383.8 bits: 78.4 E(85289): 1.2e-14
Smith-Waterman score: 422; 36.2% identity (65.7% similar) in 210 aa overlap (19-227:1-192)
10 20 30 40 50
pF1KB5 MKLAAMIKKMCPSDSELSIPAK-NCYRMVILGSSKVGKTAIVSRFLTGRFEDAYTPTIED
.: . : ::....:.. :::...: ::. : :...: ::.::
NP_060 MPEQSNDYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVED
10 20 30 40
60 70 80 90 100 110
pF1KB5 FHRKFYSIRGEVYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRDSFEEVQRLRQ
.:. : . :.: ::.:.: ::::.:::: : .::::.:. .:.:.::.. . .
NP_060 TYRQVISCDKSICTLQITDTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYE
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB5 QILDTKSCLKNKTKENVDVPLVICGNKGDRDFYREVDQREIEQLVGDDPQRCAYFEISAK
:: . :. ... .:... ::: :.. :::.. : : :. .::..: :::
NP_060 QICEIKGDVES-------IPIMLVGNKCDESPSREVQSSEAEALA--RTWKCAFMETSAK
110 120 130 140 150
180 190 200 210 220 230
pF1KB5 KNSSLDQMFRALFAMAKLPSEMSPDLHRKVSVQYCDVLHKKALRNKKLLRAGSGGGGGDP
: .. ..:. :. . : .: ::.: :. :..::
NP_060 LNHNVKELFQELLNLEK---------RRTVSLQIDGKKSKQQKRKEKLKGKCVIM
160 170 180 190
240 250 260 270 280
pF1KB5 GDAFGIVAPFARRPSVHSDLMYIREKASAGSQAKDKERCVIS
281 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 20:13:16 2016 done: Fri Nov 4 20:13:17 2016
Total Scan time: 6.100 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]