Result of FASTA (omim) for
pF1KB5188
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5188, 422 aa
1>>>pF1KB5188 422 - 422 aa - 422 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5493+/-0.00039; mu= 17.4679+/- 0.025
mean_var=154.3137+/-38.742, 0's: 0 Z-trim(115.2): 637 B-trim: 1179 in 1/53
Lambda= 0.103246
statistics sampled from 24748 (25546) to 24748 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.656), E-opt: 0.2 (0.3), width: 16
Scan time: 8.590
The best scores are: opt bits E(85289)
NP_005288 (OMIM: 601751) melanin-concentrating hor ( 422) 2829 433.8 3.9e-121
NP_115892 (OMIM: 606111) melanin-concentrating hor ( 340) 733 121.5 3.3e-27
NP_001035269 (OMIM: 606111) melanin-concentrating ( 340) 733 121.5 3.3e-27
NP_001041 (OMIM: 182452) somatostatin receptor typ ( 369) 674 112.7 1.5e-24
NP_001040 (OMIM: 182451) somatostatin receptor typ ( 391) 666 111.6 3.6e-24
NP_001043 (OMIM: 182454) somatostatin receptor typ ( 388) 659 110.5 7.5e-24
XP_011528651 (OMIM: 182453) PREDICTED: somatostati ( 418) 659 110.6 7.8e-24
NP_001265616 (OMIM: 182453) somatostatin receptor ( 418) 659 110.6 7.8e-24
XP_005261778 (OMIM: 182453) PREDICTED: somatostati ( 418) 659 110.6 7.8e-24
XP_016884413 (OMIM: 182453) PREDICTED: somatostati ( 418) 659 110.6 7.8e-24
XP_006724374 (OMIM: 182453) PREDICTED: somatostati ( 418) 659 110.6 7.8e-24
NP_001042 (OMIM: 182453) somatostatin receptor typ ( 418) 659 110.6 7.8e-24
XP_016884412 (OMIM: 182453) PREDICTED: somatostati ( 418) 659 110.6 7.8e-24
NP_001044 (OMIM: 182455) somatostatin receptor typ ( 364) 632 106.5 1.2e-22
NP_001166031 (OMIM: 182455) somatostatin receptor ( 364) 632 106.5 1.2e-22
NP_000902 (OMIM: 165195) delta-type opioid recepto ( 372) 604 102.3 2.1e-21
NP_001138757 (OMIM: 600018) mu-type opioid recepto ( 389) 592 100.5 7.6e-21
NP_001008504 (OMIM: 600018) mu-type opioid recepto ( 392) 592 100.5 7.6e-21
NP_001138755 (OMIM: 600018) mu-type opioid recepto ( 397) 592 100.6 7.7e-21
NP_000905 (OMIM: 600018) mu-type opioid receptor i ( 400) 592 100.6 7.7e-21
NP_001138756 (OMIM: 600018) mu-type opioid recepto ( 403) 592 100.6 7.7e-21
NP_001138754 (OMIM: 600018) mu-type opioid recepto ( 406) 592 100.6 7.8e-21
NP_001272452 (OMIM: 600018) mu-type opioid recepto ( 414) 592 100.6 7.8e-21
NP_001008503 (OMIM: 600018) mu-type opioid recepto ( 418) 592 100.6 7.9e-21
NP_001138758 (OMIM: 600018) mu-type opioid recepto ( 420) 592 100.6 7.9e-21
NP_001008505 (OMIM: 600018) mu-type opioid recepto ( 446) 592 100.6 8.2e-21
NP_001272453 (OMIM: 600018) mu-type opioid recepto ( 493) 592 100.7 8.7e-21
NP_001138751 (OMIM: 600018) mu-type opioid recepto ( 493) 592 100.7 8.7e-21
NP_000903 (OMIM: 165196) kappa-type opioid recepto ( 380) 578 98.4 3.2e-20
NP_001305426 (OMIM: 165196) kappa-type opioid rece ( 409) 578 98.5 3.3e-20
NP_005276 (OMIM: 600730) neuropeptides B/W recepto ( 328) 572 97.5 5.4e-20
NP_001186948 (OMIM: 602548) nociceptin receptor is ( 370) 550 94.3 5.6e-19
XP_016883343 (OMIM: 602548) PREDICTED: nociceptin ( 370) 550 94.3 5.6e-19
NP_000904 (OMIM: 602548) nociceptin receptor isofo ( 370) 550 94.3 5.6e-19
NP_872588 (OMIM: 602548) nociceptin receptor isofo ( 370) 550 94.3 5.6e-19
XP_011527130 (OMIM: 602548) PREDICTED: nociceptin ( 388) 550 94.3 5.8e-19
XP_016883341 (OMIM: 602548) PREDICTED: nociceptin ( 388) 550 94.3 5.8e-19
XP_016883342 (OMIM: 602548) PREDICTED: nociceptin ( 388) 550 94.3 5.8e-19
NP_001305782 (OMIM: 602548) nociceptin receptor is ( 399) 550 94.3 5.9e-19
NP_005277 (OMIM: 600731) neuropeptides B/W recepto ( 333) 535 92.0 2.5e-18
NP_001138753 (OMIM: 600018) mu-type opioid recepto ( 319) 499 86.6 1e-16
NP_001272456 (OMIM: 600018) mu-type opioid recepto ( 292) 495 85.9 1.4e-16
NP_001138752 (OMIM: 600018) mu-type opioid recepto ( 300) 495 85.9 1.5e-16
XP_016866395 (OMIM: 600018) PREDICTED: mu-type opi ( 300) 495 85.9 1.5e-16
NP_001272455 (OMIM: 600018) mu-type opioid recepto ( 300) 495 85.9 1.5e-16
NP_001138759 (OMIM: 600018) mu-type opioid recepto ( 300) 495 85.9 1.5e-16
NP_001272457 (OMIM: 600018) mu-type opioid recepto ( 314) 495 86.0 1.5e-16
XP_016866394 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 495 86.0 1.6e-16
XP_011534153 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 495 86.0 1.6e-16
XP_011534164 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 495 86.0 1.6e-16
>>NP_005288 (OMIM: 601751) melanin-concentrating hormone (422 aa)
initn: 2829 init1: 2829 opt: 2829 Z-score: 2295.7 bits: 433.8 E(85289): 3.9e-121
Smith-Waterman score: 2829; 99.8% identity (100.0% similar) in 422 aa overlap (1-422:1-422)
10 20 30 40 50 60
pF1KB5 MSVGAMKKGVGRAVGLGGGSGCQATEEDPLPDCGACAPGQGGRRWRLPQPAWVEGSSARL
:::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
NP_005 MSVGAMKKGVGRAVGLGGGSGCQATEEDPLPNCGACAPGQGGRRWRLPQPAWVEGSSARL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 WEQATGTGWMDLEASLLPTGPNASNTSDGPDNLTSAGSPPRTGSISYINIIMPSVFGTIC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 WEQATGTGWMDLEASLLPTGPNASNTSDGPDNLTSAGSPPRTGSISYINIIMPSVFGTIC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LLGIIGNSTVIFAVVKKSKLHWCNNVPDIFIINLSVVDLLFLLGMPFMIHQLMGNGVWHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LLGIIGNSTVIFAVVKKSKLHWCNNVPDIFIINLSVVDLLFLLGMPFMIHQLMGNGVWHF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 GETMCTLITAMDANSQFTSTYILTAMAIDRYLATVHPISSTKFRKPSVATLVICLLWALS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GETMCTLITAMDANSQFTSTYILTAMAIDRYLATVHPISSTKFRKPSVATLVICLLWALS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 FISITPVWLYARLIPFPGGAVGCGIRLPNPDTDLYWFTLYQFFLAFALPFVVITAAYVRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 FISITPVWLYARLIPFPGGAVGCGIRLPNPDTDLYWFTLYQFFLAFALPFVVITAAYVRI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 LQRMTSSVAPASQRSIRLRTKRVTRTAIAICLVFFVCWAPYYVLQLTQLSISRPTLTFVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LQRMTSSVAPASQRSIRLRTKRVTRTAIAICLVFFVCWAPYYVLQLTQLSISRPTLTFVY
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 LYNAAISLGYANSCLNPFVYIVLCETFRKRLVLSVKPAAQGQLRAVSNAQTADEERTESK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LYNAAISLGYANSCLNPFVYIVLCETFRKRLVLSVKPAAQGQLRAVSNAQTADEERTESK
370 380 390 400 410 420
pF1KB5 GT
::
NP_005 GT
>>NP_115892 (OMIM: 606111) melanin-concentrating hormone (340 aa)
initn: 683 init1: 399 opt: 733 Z-score: 609.4 bits: 121.5 E(85289): 3.3e-27
Smith-Waterman score: 733; 37.9% identity (70.6% similar) in 306 aa overlap (110-408:35-334)
80 90 100 110 120 130
pF1KB5 GPNASNTSDGPDNLTSAGSPPRTGSISYINIIMPSVFGTICLLGIIGNSTVIFAVVKKSK
.:.::..: :: :..:: ..:..... :
NP_115 HASCWNTSAELLNKSWNKEFAYQTASVVDTVILPSMIGIICSTGLVGNILIVFTIIRSRK
10 20 30 40 50 60
140 150 160 170 180 190
pF1KB5 LHWCNNVPDIFIINLSVVDLLFLLGMPFMIHQLMGNGVWHFGETMCTLITAMDANSQFTS
..::::.: ::.:.::. ..::::.::: .: : :: .::.::..:. .::.
NP_115 ----KTVPDIYICNLAVADLVHIVGMPFLIHQWARGGEWVFGGPLCTIITSLDTCNQFAC
70 80 90 100 110 120
200 210 220 230 240 250
pF1KB5 TYILTAMAIDRYLATVHPISSTKFRKPSVATLVICL-LWALSFISITPVWLYARLIPFPG
. :.:.:..:::.: :.:. :..: :. : : ::: ::: :::.:...: :
NP_115 SAIMTVMSVDRYFALVQPFRLTRWRT-RYKTIRINLGLWAASFILALPVWVYSKVIKFKD
130 140 150 160 170
260 270 280 290 300 310
pF1KB5 GAVGCGIRLPNPDTDLYWFTLYQFFLAFALPFVVITAAYVRIL-----QRMTSSVAPASQ
:. .:.. : .:: :. :.::: . .: .:. .: . :. :: . . .. : .
NP_115 GVESCAFDLTSPD-DVLWYTLYLTITTFFFPLPLILVCYILILCYTWEMYQQNKDARCCN
180 190 200 210 220 230
320 330 340 350 360 370
pF1KB5 RSI-RLRTKRVTRTAIAICLVFFVCWAPYYVLQLTQLSISRPTLTFVYLYNAAISLGYAN
:. . :. ..:. .... .::.. :::.:.::..:.. .:::.: : .: :.::.
NP_115 PSVPKQRVMKLTKMVLVLVVVFILSAAPYHVIQLVNLQMEQPTLAFYVGYYLSICLSYAS
240 250 260 270 280 290
380 390 400 410 420
pF1KB5 SCLNPFVYIVLCETFRKRLVLSVKPAAQGQLRAVSNAQTADEERTESKGT
: .:::.::.: .:.::: . :.. .. ..:
NP_115 SSINPFLYILLSGNFQKRLPQIQRRATEKEINNMGNTLKSHF
300 310 320 330 340
>>NP_001035269 (OMIM: 606111) melanin-concentrating horm (340 aa)
initn: 683 init1: 399 opt: 733 Z-score: 609.4 bits: 121.5 E(85289): 3.3e-27
Smith-Waterman score: 733; 37.9% identity (70.6% similar) in 306 aa overlap (110-408:35-334)
80 90 100 110 120 130
pF1KB5 GPNASNTSDGPDNLTSAGSPPRTGSISYINIIMPSVFGTICLLGIIGNSTVIFAVVKKSK
.:.::..: :: :..:: ..:..... :
NP_001 HASCWNTSAELLNKSWNKEFAYQTASVVDTVILPSMIGIICSTGLVGNILIVFTIIRSRK
10 20 30 40 50 60
140 150 160 170 180 190
pF1KB5 LHWCNNVPDIFIINLSVVDLLFLLGMPFMIHQLMGNGVWHFGETMCTLITAMDANSQFTS
..::::.: ::.:.::. ..::::.::: .: : :: .::.::..:. .::.
NP_001 ----KTVPDIYICNLAVADLVHIVGMPFLIHQWARGGEWVFGGPLCTIITSLDTCNQFAC
70 80 90 100 110 120
200 210 220 230 240 250
pF1KB5 TYILTAMAIDRYLATVHPISSTKFRKPSVATLVICL-LWALSFISITPVWLYARLIPFPG
. :.:.:..:::.: :.:. :..: :. : : ::: ::: :::.:...: :
NP_001 SAIMTVMSVDRYFALVQPFRLTRWRT-RYKTIRINLGLWAASFILALPVWVYSKVIKFKD
130 140 150 160 170
260 270 280 290 300 310
pF1KB5 GAVGCGIRLPNPDTDLYWFTLYQFFLAFALPFVVITAAYVRIL-----QRMTSSVAPASQ
:. .:.. : .:: :. :.::: . .: .:. .: . :. :: . . .. : .
NP_001 GVESCAFDLTSPD-DVLWYTLYLTITTFFFPLPLILVCYILILCYTWEMYQQNKDARCCN
180 190 200 210 220 230
320 330 340 350 360 370
pF1KB5 RSI-RLRTKRVTRTAIAICLVFFVCWAPYYVLQLTQLSISRPTLTFVYLYNAAISLGYAN
:. . :. ..:. .... .::.. :::.:.::..:.. .:::.: : .: :.::.
NP_001 PSVPKQRVMKLTKMVLVLVVVFILSAAPYHVIQLVNLQMEQPTLAFYVGYYLSICLSYAS
240 250 260 270 280 290
380 390 400 410 420
pF1KB5 SCLNPFVYIVLCETFRKRLVLSVKPAAQGQLRAVSNAQTADEERTESKGT
: .:::.::.: .:.::: . :.. .. ..:
NP_001 SSINPFLYILLSGNFQKRLPQIQRRATEKEINNMGNTLKSHF
300 310 320 330 340
>>NP_001041 (OMIM: 182452) somatostatin receptor type 2 (369 aa)
initn: 539 init1: 248 opt: 674 Z-score: 561.5 bits: 112.7 E(85289): 1.5e-24
Smith-Waterman score: 678; 32.4% identity (65.3% similar) in 352 aa overlap (71-420:20-344)
50 60 70 80 90 100
pF1KB5 GGRRWRLPQPAWVEGSSARLWEQATGTGWMDLEASLLPTGPNASNTSDGPDNLTSAGSPP
::..:.. : :.:: .. .:::
NP_001 MDMADEPLNGSHTWLSIPFDLNGSVVST--NTSNQTEPYYDLTS-----
10 20 30 40
110 120 130 140 150 160
pF1KB5 RTGSISYINIIMPSVFGTICLLGIIGNSTVIFAVVKKSKLHWCNNVPDIFIINLSVVDLL
: .. .. ..:..:. ::. ::..... .:. ... .:.:.::...: :
NP_001 --------NAVLTFIYFVVCIIGLCGNTLVIYVILRYAKM---KTITNIYILNLAIADEL
50 60 70 80 90
170 180 190 200 210 220
pF1KB5 FLLGMPFMIHQLMGNGVWHFGETMCTLITAMDANSQFTSTYILTAMAIDRYLATVHPISS
:.::.::. :. : ::...: .. ..:. .:::: . ::.:.::::::.::::.:
NP_001 FMLGLPFLAMQVALVH-WPFGKAICRVVMTVDGINQFTSIFCLTVMSIDRYLAVVHPIKS
100 110 120 130 140 150
230 240 250 260 270
pF1KB5 TKFRKPSVATLVICLLWALSFISITPVWLYARLIPFPGGAVGCGIRLPNPDTDLYW-FTL
.:.:.: .: .. .:..:.. : :. .:: : : .: : :. . : : .
NP_001 AKWRRPRTAKMITMAVWGVSLLVILPIMIYAGLRSNQWGRSSCTINWPGESGAWYTGFII
160 170 180 190 200 210
280 290 300 310 320 330
pF1KB5 YQFFLAFALPFVVITAAYVRILQRMTSSVAPASQRSIRLRTKRVTRTAIAICLVFFVCWA
: :.:.: .:...: :. :. .. :: ... . . :.::: . . ::. ::
NP_001 YTFILGFLVPLTIICLCYLFIIIKVKSSGIRVGSSKRKKSEKKVTRMVSIVVAVFIFCWL
220 230 240 250 260 270
340 350 360 370 380 390
pF1KB5 PYYVLQLTQLSIS-RPTLTFVYLYNAAISLGYANSCLNPFVYIVLCETFRKRLVLSVKPA
:.:.......:.. :: .. ... .. : ::::: ::..: : ..:.: .
NP_001 PFYIFNVSSVSMAISPTPALKGMFDFVVVLTYANSCANPILYAFLSDNFKKSF-------
280 290 300 310 320
400 410 420
pF1KB5 AQGQLRAVSNAQTADEERTESKGT
:. : :. . : : ::..::
NP_001 -QNVLCLVKVSGTDDGERSDSKQDKSRLNETTETQRTLLNGDLQTSI
330 340 350 360
>>NP_001040 (OMIM: 182451) somatostatin receptor type 1 (391 aa)
initn: 571 init1: 293 opt: 666 Z-score: 554.8 bits: 111.6 E(85289): 3.6e-24
Smith-Waterman score: 666; 33.3% identity (67.6% similar) in 312 aa overlap (80-389:29-332)
50 60 70 80 90 100
pF1KB5 PAWVEGSSARLWEQATGTGWMDLEASLLPTGPNASNTSDGPDNLTSAGSPPRTGSISYIN
::.:. ..:: .. .: : : . .
NP_001 MFPNGTASSPSSSPSPSPGSCGEGGGSRGPGAG-AADGMEEPGRNASQNGTLSEGQGS
10 20 30 40 50
110 120 130 140 150 160
pF1KB5 IIMPS-VFGTICLLGIIGNSTVIFAVVKKSKLHWCNNVPDIFIINLSVVDLLFLLGMPFM
:. : .....::.:. ::: ::..... .:.. .: :.:.::...: :..:..::.
NP_001 AILISFIYSVVCLVGLCGNSMVIYVILRYAKMKTATN---IYILNLAIADELLMLSVPFL
60 70 80 90 100 110
170 180 190 200 210 220
pF1KB5 IHQLMGNGVWHFGETMCTLITAMDANSQFTSTYILTAMAIDRYLATVHPISSTKFRKPSV
. . . : :: .: :. ..:: ..::: : ::....:::.:.::::.....:.:.:
NP_001 VTSTLLRH-WPFGALLCRLVLSVDAVNMFTSIYCLTVLSVDRYVAVVHPIKAARYRRPTV
120 130 140 150 160 170
230 240 250 260 270 280
pF1KB5 ATLVICLLWALSFISITPVWLYARLIPFPGGAVGCGIRLPNPDTD-LYWFTLYQFFLAFA
: .: .:.::.. : :. ...: :.:.:.. .:.: : :.:: :...:
NP_001 AKVVNLGVWVLSLLVILPIVVFSRTAANSDGTVACNMLMPEPAQRWLVGFVLYTFLMGFL
180 190 200 210 220 230
290 300 310 320 330 340
pF1KB5 LPFVVITAAYVRILQRMTSSVAPASQRSIRLRTKRVTRTAIAICLVFFVCWAPYYVLQLT
:: .: :: :. .: . :. .. . ...: .. . .:: .:: :.::.::.
NP_001 LPVGAICLCYVLIIAKMRMVALKAGWQQRKRSERKITLMVMMVVMVFVICWMPFYVVQLV
240 250 260 270 280 290
350 360 370 380 390 400
pF1KB5 QLSISRPTLTFVYLYNAAISLGYANSCLNPFVYIVLCETFRKRLVLSVKPAAQGQLRAVS
.. . : : .. ::::::: ::..: : ..:..
NP_001 NVFAEQDDATVSQL---SVILGYANSCANPILYGFLSDNFKRSFQRILCLSWMDNAAEEP
300 310 320 330 340 350
410 420
pF1KB5 NAQTADEERTESKGT
NP_001 VDYYATALKSRAYSVEDFQPENLESGGVFRNGTCTSRITTL
360 370 380 390
>>NP_001043 (OMIM: 182454) somatostatin receptor type 4 (388 aa)
initn: 575 init1: 377 opt: 659 Z-score: 549.2 bits: 110.5 E(85289): 7.5e-24
Smith-Waterman score: 660; 31.9% identity (66.0% similar) in 329 aa overlap (62-389:12-320)
40 50 60 70 80 90
pF1KB5 DCGACAPGQGGRRWRLPQPAWVEGSSARLWEQATGTGWMDLEASLLPTGPNASNTSDGPD
:.. ::.: :.:.:.:..:
NP_001 MSAPSTLPPGGEEGLGTAW-----------PSAANASSAPA
10 20 30
100 110 120 130 140 150
pF1KB5 NLTSAGSPPRTGSISYINIIMPSVFGTICLLGIIGNSTVIFAVVKKSKLHWCNNVPDIFI
. : . : . . . . . ... .::.:..::. :::.... .:.. .: :..
NP_001 EAEEAVAGPGDARAAGM-VAIQCIYALVCLVGLVGNALVIFVILRYAKMKTATN---IYL
40 50 60 70 80
160 170 180 190 200 210
pF1KB5 INLSVVDLLFLLGMPFMIHQLMGNGVWHFGETMCTLITAMDANSQFTSTYILTAMAIDRY
.::.:.: ::.:..::. . : :: ..: . ..:. ..:::.. ::....:::
NP_001 LNLAVADELFMLSVPFVASSAALRH-WPFGSVLCRAVLSVDGLNMFTSVFCLTVLSVDRY
90 100 110 120 130 140
220 230 240 250 260 270
pF1KB5 LATVHPISSTKFRKPSVATLVICLLWALSFISITPVWLYARLIPFPGG-AVGCGIRLPNP
.:.:::. .. .:.:::: :. .: :.. :. ..: : :: ::.:... :.:
NP_001 VAVVHPLRAATYRRPSVAKLINLGVWLASLLVTLPIAIFADTRPARGGQAVACNLQWPHP
150 160 170 180 190 200
280 290 300 310 320 330
pF1KB5 DTDLYWFTLYQFFLAFALPFVVITAAYVRILQRMTSSVAPASQRSIRLRTKRVTRTAIAI
. :..: :.:.: :: ..: :. :. .: . . :. .. : :..:: .. .
NP_001 AWSAV-FVVYTFLLGFLLPVLAIGLCYLLIVGKMRAVALRAGWQQRRRSEKKITRLVLMV
210 220 230 240 250 260
340 350 360 370 380 390
pF1KB5 CLVFFVCWAPYYVLQLTQLSISRPTLTFVYLYNAAISLGYANSCLNPFVYIVLCETFRKR
.:: .:: :.::.:: .: .. : . .... :.::::: ::..: : ..::.
NP_001 VVVFVLCWMPFYVVQLLNLFVTSLDAT---VNHVSLILSYANSCANPILYGFLSDNFRRF
270 280 290 300 310 320
400 410 420
pF1KB5 LVLSVKPAAQGQLRAVSNAQTADEERTESKGT
NP_001 FQRVLCLRCCLLEGAGGAEEEPLDYYATALKSKGGAGCMCPPLPCQQEALQPEPGRKRIP
330 340 350 360 370 380
>>XP_011528651 (OMIM: 182453) PREDICTED: somatostatin re (418 aa)
initn: 542 init1: 229 opt: 659 Z-score: 548.9 bits: 110.6 E(85289): 7.8e-24
Smith-Waterman score: 659; 32.6% identity (62.1% similar) in 359 aa overlap (81-418:6-354)
60 70 80 90 100
pF1KB5 AWVEGSSARLWEQATGTGWMDLEASLLPTGPNASNTSDGPDNLTSAGSP----------P
:.. .:.. :.: .:: : :
XP_011 MDMLHPSSVSTTSEPENASSAWPPDATLGNVSAGP
10 20 30
110 120 130 140 150 160
pF1KB5 RTGSISYINIIMPSVFGTICLLGIIGNSTVIFAVVKKSKLHWCNNVPDIFIINLSVVDLL
.... ....: :. ..:..:..::: ::..:.... .: ...:.::...: :
XP_011 SPAGLAVSGVLIPLVYLVVCVVGLLGNSLVIYVVLRHTA---SPSVTNVYILNLALADEL
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB5 FLLGMPFMIHQLMGNGVWHFGETMCTLITAMDANSQFTSTYILTAMAIDRYLATVHPISS
:.::.::. : . . : :: :: :. :.:. .:::: . ::.:..:::::.::: :
XP_011 FMLGLPFLAAQ-NALSYWPFGSLMCRLVMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRS
100 110 120 130 140 150
230 240 250 260 270
pF1KB5 TKFRKPSVATLVICLLWALSFISITPVWLYARLIPFPGGAVGCGIRLPNPDTDLYW---F
...: :: : .:. : . . :: ... . : : : .. :.: . : :
XP_011 ARWRTAPVARTVSAAVWVASAVVVLPVVVFSGV---PRGMSTCHMQWPEPAAA--WRAGF
160 170 180 190 200
280 290 300 310 320 330
pF1KB5 TLYQFFLAFALPFVVITAAYVRILQRMTSS----VAPASQRSIRLRTKRVTRTAIAICLV
.: :.: :..:: :. :. .. :. ::. :: : .:::: ..:. .
XP_011 IIYTAALGFFGPLLVICLCYLLIVVKVRSAGRRVWAPSCQRR-RRSERRVTRMVVAVVAL
210 220 230 240 250 260
340 350 360 370 380
pF1KB5 FFVCWAPYYVLQLTQLSISRPTL-TFVYLYNAAISLGYANSCLNPFVYIVLCETFR---K
: .:: :.:::..... : .: :: ...: ::::: ::..: : :. .
XP_011 FVLCWMPFYVLNIVNVVCPLPEEPAFFGLYFLVVALPYANSCANPILYGFLSYRFKQGFR
270 280 290 300 310 320
390 400 410 420
pF1KB5 RLVLSVKPAAQGQLRAVSNAQTADEERTESKGT
:..: . ...: .:. . ..:: :
XP_011 RVLLRPSRRVRSQEPTVGPPEKTEEEDEEEEDGEESREGGKGKEMNGRVSQITQPGTSGQ
330 340 350 360 370 380
>>NP_001265616 (OMIM: 182453) somatostatin receptor type (418 aa)
initn: 542 init1: 229 opt: 659 Z-score: 548.9 bits: 110.6 E(85289): 7.8e-24
Smith-Waterman score: 659; 32.6% identity (62.1% similar) in 359 aa overlap (81-418:6-354)
60 70 80 90 100
pF1KB5 AWVEGSSARLWEQATGTGWMDLEASLLPTGPNASNTSDGPDNLTSAGSP----------P
:.. .:.. :.: .:: : :
NP_001 MDMLHPSSVSTTSEPENASSAWPPDATLGNVSAGP
10 20 30
110 120 130 140 150 160
pF1KB5 RTGSISYINIIMPSVFGTICLLGIIGNSTVIFAVVKKSKLHWCNNVPDIFIINLSVVDLL
.... ....: :. ..:..:..::: ::..:.... .: ...:.::...: :
NP_001 SPAGLAVSGVLIPLVYLVVCVVGLLGNSLVIYVVLRHTA---SPSVTNVYILNLALADEL
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB5 FLLGMPFMIHQLMGNGVWHFGETMCTLITAMDANSQFTSTYILTAMAIDRYLATVHPISS
:.::.::. : . . : :: :: :. :.:. .:::: . ::.:..:::::.::: :
NP_001 FMLGLPFLAAQ-NALSYWPFGSLMCRLVMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRS
100 110 120 130 140 150
230 240 250 260 270
pF1KB5 TKFRKPSVATLVICLLWALSFISITPVWLYARLIPFPGGAVGCGIRLPNPDTDLYW---F
...: :: : .:. : . . :: ... . : : : .. :.: . : :
NP_001 ARWRTAPVARTVSAAVWVASAVVVLPVVVFSGV---PRGMSTCHMQWPEPAAA--WRAGF
160 170 180 190 200
280 290 300 310 320 330
pF1KB5 TLYQFFLAFALPFVVITAAYVRILQRMTSS----VAPASQRSIRLRTKRVTRTAIAICLV
.: :.: :..:: :. :. .. :. ::. :: : .:::: ..:. .
NP_001 IIYTAALGFFGPLLVICLCYLLIVVKVRSAGRRVWAPSCQRR-RRSERRVTRMVVAVVAL
210 220 230 240 250 260
340 350 360 370 380
pF1KB5 FFVCWAPYYVLQLTQLSISRPTL-TFVYLYNAAISLGYANSCLNPFVYIVLCETFR---K
: .:: :.:::..... : .: :: ...: ::::: ::..: : :. .
NP_001 FVLCWMPFYVLNIVNVVCPLPEEPAFFGLYFLVVALPYANSCANPILYGFLSYRFKQGFR
270 280 290 300 310 320
390 400 410 420
pF1KB5 RLVLSVKPAAQGQLRAVSNAQTADEERTESKGT
:..: . ...: .:. . ..:: :
NP_001 RVLLRPSRRVRSQEPTVGPPEKTEEEDEEEEDGEESREGGKGKEMNGRVSQITQPGTSGQ
330 340 350 360 370 380
>>XP_005261778 (OMIM: 182453) PREDICTED: somatostatin re (418 aa)
initn: 542 init1: 229 opt: 659 Z-score: 548.9 bits: 110.6 E(85289): 7.8e-24
Smith-Waterman score: 659; 32.6% identity (62.1% similar) in 359 aa overlap (81-418:6-354)
60 70 80 90 100
pF1KB5 AWVEGSSARLWEQATGTGWMDLEASLLPTGPNASNTSDGPDNLTSAGSP----------P
:.. .:.. :.: .:: : :
XP_005 MDMLHPSSVSTTSEPENASSAWPPDATLGNVSAGP
10 20 30
110 120 130 140 150 160
pF1KB5 RTGSISYINIIMPSVFGTICLLGIIGNSTVIFAVVKKSKLHWCNNVPDIFIINLSVVDLL
.... ....: :. ..:..:..::: ::..:.... .: ...:.::...: :
XP_005 SPAGLAVSGVLIPLVYLVVCVVGLLGNSLVIYVVLRHTA---SPSVTNVYILNLALADEL
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB5 FLLGMPFMIHQLMGNGVWHFGETMCTLITAMDANSQFTSTYILTAMAIDRYLATVHPISS
:.::.::. : . . : :: :: :. :.:. .:::: . ::.:..:::::.::: :
XP_005 FMLGLPFLAAQ-NALSYWPFGSLMCRLVMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRS
100 110 120 130 140 150
230 240 250 260 270
pF1KB5 TKFRKPSVATLVICLLWALSFISITPVWLYARLIPFPGGAVGCGIRLPNPDTDLYW---F
...: :: : .:. : . . :: ... . : : : .. :.: . : :
XP_005 ARWRTAPVARTVSAAVWVASAVVVLPVVVFSGV---PRGMSTCHMQWPEPAAA--WRAGF
160 170 180 190 200
280 290 300 310 320 330
pF1KB5 TLYQFFLAFALPFVVITAAYVRILQRMTSS----VAPASQRSIRLRTKRVTRTAIAICLV
.: :.: :..:: :. :. .. :. ::. :: : .:::: ..:. .
XP_005 IIYTAALGFFGPLLVICLCYLLIVVKVRSAGRRVWAPSCQRR-RRSERRVTRMVVAVVAL
210 220 230 240 250 260
340 350 360 370 380
pF1KB5 FFVCWAPYYVLQLTQLSISRPTL-TFVYLYNAAISLGYANSCLNPFVYIVLCETFR---K
: .:: :.:::..... : .: :: ...: ::::: ::..: : :. .
XP_005 FVLCWMPFYVLNIVNVVCPLPEEPAFFGLYFLVVALPYANSCANPILYGFLSYRFKQGFR
270 280 290 300 310 320
390 400 410 420
pF1KB5 RLVLSVKPAAQGQLRAVSNAQTADEERTESKGT
:..: . ...: .:. . ..:: :
XP_005 RVLLRPSRRVRSQEPTVGPPEKTEEEDEEEEDGEESREGGKGKEMNGRVSQITQPGTSGQ
330 340 350 360 370 380
>>XP_016884413 (OMIM: 182453) PREDICTED: somatostatin re (418 aa)
initn: 542 init1: 229 opt: 659 Z-score: 548.9 bits: 110.6 E(85289): 7.8e-24
Smith-Waterman score: 659; 32.6% identity (62.1% similar) in 359 aa overlap (81-418:6-354)
60 70 80 90 100
pF1KB5 AWVEGSSARLWEQATGTGWMDLEASLLPTGPNASNTSDGPDNLTSAGSP----------P
:.. .:.. :.: .:: : :
XP_016 MDMLHPSSVSTTSEPENASSAWPPDATLGNVSAGP
10 20 30
110 120 130 140 150 160
pF1KB5 RTGSISYINIIMPSVFGTICLLGIIGNSTVIFAVVKKSKLHWCNNVPDIFIINLSVVDLL
.... ....: :. ..:..:..::: ::..:.... .: ...:.::...: :
XP_016 SPAGLAVSGVLIPLVYLVVCVVGLLGNSLVIYVVLRHTA---SPSVTNVYILNLALADEL
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB5 FLLGMPFMIHQLMGNGVWHFGETMCTLITAMDANSQFTSTYILTAMAIDRYLATVHPISS
:.::.::. : . . : :: :: :. :.:. .:::: . ::.:..:::::.::: :
XP_016 FMLGLPFLAAQ-NALSYWPFGSLMCRLVMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRS
100 110 120 130 140 150
230 240 250 260 270
pF1KB5 TKFRKPSVATLVICLLWALSFISITPVWLYARLIPFPGGAVGCGIRLPNPDTDLYW---F
...: :: : .:. : . . :: ... . : : : .. :.: . : :
XP_016 ARWRTAPVARTVSAAVWVASAVVVLPVVVFSGV---PRGMSTCHMQWPEPAAA--WRAGF
160 170 180 190 200
280 290 300 310 320 330
pF1KB5 TLYQFFLAFALPFVVITAAYVRILQRMTSS----VAPASQRSIRLRTKRVTRTAIAICLV
.: :.: :..:: :. :. .. :. ::. :: : .:::: ..:. .
XP_016 IIYTAALGFFGPLLVICLCYLLIVVKVRSAGRRVWAPSCQRR-RRSERRVTRMVVAVVAL
210 220 230 240 250 260
340 350 360 370 380
pF1KB5 FFVCWAPYYVLQLTQLSISRPTL-TFVYLYNAAISLGYANSCLNPFVYIVLCETFR---K
: .:: :.:::..... : .: :: ...: ::::: ::..: : :. .
XP_016 FVLCWMPFYVLNIVNVVCPLPEEPAFFGLYFLVVALPYANSCANPILYGFLSYRFKQGFR
270 280 290 300 310 320
390 400 410 420
pF1KB5 RLVLSVKPAAQGQLRAVSNAQTADEERTESKGT
:..: . ...: .:. . ..:: :
XP_016 RVLLRPSRRVRSQEPTVGPPEKTEEEDEEEEDGEESREGGKGKEMNGRVSQITQPGTSGQ
330 340 350 360 370 380
422 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 03:25:32 2016 done: Fri Nov 4 03:25:33 2016
Total Scan time: 8.590 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]