Result of FASTA (omim) for pF1KB5204
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5204, 269 aa
  1>>>pF1KB5204 269 - 269 aa - 269 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.9874+/-0.000299; mu= 4.1004+/- 0.019
 mean_var=172.2800+/-36.017, 0's: 0 Z-trim(122.4): 36  B-trim: 0 in 0/57
 Lambda= 0.097714
 statistics sampled from 40423 (40463) to 40423 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.801), E-opt: 0.2 (0.474), width:  16
 Scan time:  7.730

The best scores are:                                      opt bits E(85289)
NP_006684 (OMIM: 603052) cleavage and polyadenylat ( 269) 1972 289.2 5.5e-78
XP_011514057 (OMIM: 603052) PREDICTED: cleavage an ( 274) 1943 285.1 9.5e-77
XP_016867191 (OMIM: 603052) PREDICTED: cleavage an ( 221) 1583 234.3 1.5e-61
XP_016867192 (OMIM: 603052) PREDICTED: cleavage an ( 221) 1583 234.3 1.5e-61
NP_001075028 (OMIM: 603052) cleavage and polyadeny ( 244) 1447 215.1 9.7e-56
XP_016867190 (OMIM: 603052) PREDICTED: cleavage an ( 247) 1441 214.3 1.8e-55
NP_001305089 (OMIM: 603052) cleavage and polyadeny ( 243) 1438 213.9 2.3e-55
XP_011514058 (OMIM: 603052) PREDICTED: cleavage an ( 249) 1419 211.2 1.5e-54
XP_016867189 (OMIM: 603052) PREDICTED: cleavage an ( 252) 1412 210.2   3e-54
XP_011514059 (OMIM: 603052) PREDICTED: cleavage an ( 248) 1410 209.9 3.7e-54
NP_001305091 (OMIM: 603052) cleavage and polyadeny ( 191) 1087 164.3 1.5e-40
NP_001305090 (OMIM: 603052) cleavage and polyadeny ( 262) 1000 152.1 9.6e-37


>>NP_006684 (OMIM: 603052) cleavage and polyadenylation   (269 aa)
 initn: 1972 init1: 1972 opt: 1972  Z-score: 1521.1  bits: 289.2 E(85289): 5.5e-78
Smith-Waterman score: 1972; 100.0% identity (100.0% similar) in 269 aa overlap (1-269:1-269)

               10        20        30        40        50        60
pF1KB5 MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMHPRFELPMGTTEQPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMHPRFELPMGTTEQPP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 LPQQTQPPAKQSNNPPLQRSSSLIQLTSQNSSPNQQRTPQVIGVMQSQNSSAGNRGPRPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LPQQTQPPAKQSNNPPLQRSSSLIQLTSQNSSPNQQRTPQVIGVMQSQNSSAGNRGPRPL
              190       200       210       220       230       240

              250       260         
pF1KB5 EQVTCYKCGEKGHYANRCTKGHLAFLSGQ
       :::::::::::::::::::::::::::::
NP_006 EQVTCYKCGEKGHYANRCTKGHLAFLSGQ
              250       260         

>>XP_011514057 (OMIM: 603052) PREDICTED: cleavage and po  (274 aa)
 initn: 2115 init1: 1245 opt: 1943  Z-score: 1498.9  bits: 285.1 E(85289): 9.5e-77
Smith-Waterman score: 1943; 97.8% identity (98.2% similar) in 274 aa overlap (1-269:1-274)

               10        20        30        40        50        60
pF1KB5 MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
               70        80        90       100       110       120

              130       140       150       160            170     
pF1KB5 IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMH-----PRFELPMGT
       :::::::::::::::::::::::::::::::::::::::::::::.     :::::::::
XP_011 IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMQLLVTSPRFELPMGT
              130       140       150       160       170       180

         180       190       200       210       220       230     
pF1KB5 TEQPPLPQQTQPPAKQSNNPPLQRSSSLIQLTSQNSSPNQQRTPQVIGVMQSQNSSAGNR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TEQPPLPQQTQPPAKQSNNPPLQRSSSLIQLTSQNSSPNQQRTPQVIGVMQSQNSSAGNR
              190       200       210       220       230       240

         240       250       260         
pF1KB5 GPRPLEQVTCYKCGEKGHYANRCTKGHLAFLSGQ
       ::::::::::::::::::::::::::::::::::
XP_011 GPRPLEQVTCYKCGEKGHYANRCTKGHLAFLSGQ
              250       260       270    

>>XP_016867191 (OMIM: 603052) PREDICTED: cleavage and po  (221 aa)
 initn: 1787 init1: 885 opt: 1583  Z-score: 1225.9  bits: 234.3 E(85289): 1.5e-61
Smith-Waterman score: 1583; 97.3% identity (97.7% similar) in 221 aa overlap (54-269:1-221)

            30        40        50        60        70        80   
pF1KB5 GAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQCE
                                     ::::::::::::::::::::::::::::::
XP_016                               MCPFRHISGEKTVVCKHWLRGLCKKGDQCE
                                             10        20        30

            90       100       110       120       130       140   
pF1KB5 FLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHT
               40        50        60        70        80        90

           150       160            170       180       190        
pF1KB5 RRVICVNYLVGFCPEGPSCKFMH-----PRFELPMGTTEQPPLPQQTQPPAKQSNNPPLQ
       ::::::::::::::::::::::.     ::::::::::::::::::::::::::::::::
XP_016 RRVICVNYLVGFCPEGPSCKFMQLLVTSPRFELPMGTTEQPPLPQQTQPPAKQSNNPPLQ
              100       110       120       130       140       150

      200       210       220       230       240       250        
pF1KB5 RSSSLIQLTSQNSSPNQQRTPQVIGVMQSQNSSAGNRGPRPLEQVTCYKCGEKGHYANRC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RSSSLIQLTSQNSSPNQQRTPQVIGVMQSQNSSAGNRGPRPLEQVTCYKCGEKGHYANRC
              160       170       180       190       200       210

      260         
pF1KB5 TKGHLAFLSGQ
       :::::::::::
XP_016 TKGHLAFLSGQ
              220 

>>XP_016867192 (OMIM: 603052) PREDICTED: cleavage and po  (221 aa)
 initn: 1787 init1: 885 opt: 1583  Z-score: 1225.9  bits: 234.3 E(85289): 1.5e-61
Smith-Waterman score: 1583; 97.3% identity (97.7% similar) in 221 aa overlap (54-269:1-221)

            30        40        50        60        70        80   
pF1KB5 GAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQCE
                                     ::::::::::::::::::::::::::::::
XP_016                               MCPFRHISGEKTVVCKHWLRGLCKKGDQCE
                                             10        20        30

            90       100       110       120       130       140   
pF1KB5 FLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHT
               40        50        60        70        80        90

           150       160            170       180       190        
pF1KB5 RRVICVNYLVGFCPEGPSCKFMH-----PRFELPMGTTEQPPLPQQTQPPAKQSNNPPLQ
       ::::::::::::::::::::::.     ::::::::::::::::::::::::::::::::
XP_016 RRVICVNYLVGFCPEGPSCKFMQLLVTSPRFELPMGTTEQPPLPQQTQPPAKQSNNPPLQ
              100       110       120       130       140       150

      200       210       220       230       240       250        
pF1KB5 RSSSLIQLTSQNSSPNQQRTPQVIGVMQSQNSSAGNRGPRPLEQVTCYKCGEKGHYANRC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RSSSLIQLTSQNSSPNQQRTPQVIGVMQSQNSSAGNRGPRPLEQVTCYKCGEKGHYANRC
              160       170       180       190       200       210

      260         
pF1KB5 TKGHLAFLSGQ
       :::::::::::
XP_016 TKGHLAFLSGQ
              220 

>>NP_001075028 (OMIM: 603052) cleavage and polyadenylati  (244 aa)
 initn: 1477 init1: 1437 opt: 1447  Z-score: 1121.7  bits: 215.1 E(85289): 9.7e-56
Smith-Waterman score: 1752; 90.7% identity (90.7% similar) in 269 aa overlap (1-269:1-244)

               10        20        30        40        50        60
pF1KB5 MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMHPRFELPMGTTEQPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMHPRFELPMGTTEQPP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 LPQQTQPPAKQSNNPPLQRSSSLIQLTSQNSSPNQQRTPQVIGVMQSQNSSAGNRGPRPL
       :::::::::::                         ::::::::::::::::::::::::
NP_001 LPQQTQPPAKQ-------------------------RTPQVIGVMQSQNSSAGNRGPRPL
              190                                200       210     

              250       260         
pF1KB5 EQVTCYKCGEKGHYANRCTKGHLAFLSGQ
       :::::::::::::::::::::::::::::
NP_001 EQVTCYKCGEKGHYANRCTKGHLAFLSGQ
         220       230       240    

>>XP_016867190 (OMIM: 603052) PREDICTED: cleavage and po  (247 aa)
 initn: 1666 init1: 1433 opt: 1441  Z-score: 1117.0  bits: 214.3 E(85289): 1.8e-55
Smith-Waterman score: 1580; 89.5% identity (89.5% similar) in 247 aa overlap (1-247:1-221)

               10        20        30        40        50        60
pF1KB5 MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMHPRFELPMGTTEQPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMHPRFELPMGTTEQPP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 LPQQTQPPAKQSNNPPLQRSSSLIQLTSQNSSPNQQRTPQVIGVMQSQNSSAGNRGPRPL
       ::::::::::                          ::::::::::::::::::::::::
XP_016 LPQQTQPPAK--------------------------RTPQVIGVMQSQNSSAGNRGPRPL
              190                                 200       210    

              250       260             
pF1KB5 EQVTCYKCGEKGHYANRCTKGHLAFLSGQ    
       :::::::                          
XP_016 EQVTCYKVSPWAGGQGGVFPYRQWPFPHAPCVW
          220       230       240       

>>NP_001305089 (OMIM: 603052) cleavage and polyadenylati  (243 aa)
 initn: 1666 init1: 1433 opt: 1438  Z-score: 1114.8  bits: 213.9 E(85289): 2.3e-55
Smith-Waterman score: 1743; 90.3% identity (90.3% similar) in 269 aa overlap (1-269:1-243)

               10        20        30        40        50        60
pF1KB5 MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMHPRFELPMGTTEQPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMHPRFELPMGTTEQPP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 LPQQTQPPAKQSNNPPLQRSSSLIQLTSQNSSPNQQRTPQVIGVMQSQNSSAGNRGPRPL
       ::::::::::                          ::::::::::::::::::::::::
NP_001 LPQQTQPPAK--------------------------RTPQVIGVMQSQNSSAGNRGPRPL
              190                                 200       210    

              250       260         
pF1KB5 EQVTCYKCGEKGHYANRCTKGHLAFLSGQ
       :::::::::::::::::::::::::::::
NP_001 EQVTCYKCGEKGHYANRCTKGHLAFLSGQ
          220       230       240   

>>XP_011514058 (OMIM: 603052) PREDICTED: cleavage and po  (249 aa)
 initn: 1800 init1: 1245 opt: 1419  Z-score: 1100.2  bits: 211.2 E(85289): 1.5e-54
Smith-Waterman score: 1723; 88.7% identity (89.1% similar) in 274 aa overlap (1-269:1-249)

               10        20        30        40        50        60
pF1KB5 MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
               70        80        90       100       110       120

              130       140       150       160            170     
pF1KB5 IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMH-----PRFELPMGT
       :::::::::::::::::::::::::::::::::::::::::::::.     :::::::::
XP_011 IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMQLLVTSPRFELPMGT
              130       140       150       160       170       180

         180       190       200       210       220       230     
pF1KB5 TEQPPLPQQTQPPAKQSNNPPLQRSSSLIQLTSQNSSPNQQRTPQVIGVMQSQNSSAGNR
       ::::::::::::::::                         :::::::::::::::::::
XP_011 TEQPPLPQQTQPPAKQ-------------------------RTPQVIGVMQSQNSSAGNR
              190                                200       210     

         240       250       260         
pF1KB5 GPRPLEQVTCYKCGEKGHYANRCTKGHLAFLSGQ
       ::::::::::::::::::::::::::::::::::
XP_011 GPRPLEQVTCYKCGEKGHYANRCTKGHLAFLSGQ
         220       230       240         

>>XP_016867189 (OMIM: 603052) PREDICTED: cleavage and po  (252 aa)
 initn: 1643 init1: 1245 opt: 1412  Z-score: 1094.8  bits: 210.2 E(85289): 3e-54
Smith-Waterman score: 1551; 87.3% identity (87.7% similar) in 252 aa overlap (1-247:1-226)

               10        20        30        40        50        60
pF1KB5 MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
               70        80        90       100       110       120

              130       140       150       160            170     
pF1KB5 IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMH-----PRFELPMGT
       :::::::::::::::::::::::::::::::::::::::::::::.     :::::::::
XP_016 IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMQLLVTSPRFELPMGT
              130       140       150       160       170       180

         180       190       200       210       220       230     
pF1KB5 TEQPPLPQQTQPPAKQSNNPPLQRSSSLIQLTSQNSSPNQQRTPQVIGVMQSQNSSAGNR
       :::::::::::::::                          :::::::::::::::::::
XP_016 TEQPPLPQQTQPPAK--------------------------RTPQVIGVMQSQNSSAGNR
              190                                 200       210    

         240       250       260             
pF1KB5 GPRPLEQVTCYKCGEKGHYANRCTKGHLAFLSGQ    
       ::::::::::::                          
XP_016 GPRPLEQVTCYKVSPWAGGQGGVFPYRQWPFPHAPCVW
          220       230       240       250  

>>XP_011514059 (OMIM: 603052) PREDICTED: cleavage and po  (248 aa)
 initn: 1790 init1: 1245 opt: 1410  Z-score: 1093.4  bits: 209.9 E(85289): 3.7e-54
Smith-Waterman score: 1714; 88.3% identity (88.7% similar) in 274 aa overlap (1-269:1-248)

               10        20        30        40        50        60
pF1KB5 MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
               70        80        90       100       110       120

              130       140       150       160            170     
pF1KB5 IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMH-----PRFELPMGT
       :::::::::::::::::::::::::::::::::::::::::::::.     :::::::::
XP_011 IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMQLLVTSPRFELPMGT
              130       140       150       160       170       180

         180       190       200       210       220       230     
pF1KB5 TEQPPLPQQTQPPAKQSNNPPLQRSSSLIQLTSQNSSPNQQRTPQVIGVMQSQNSSAGNR
       :::::::::::::::                          :::::::::::::::::::
XP_011 TEQPPLPQQTQPPAK--------------------------RTPQVIGVMQSQNSSAGNR
              190                                 200       210    

         240       250       260         
pF1KB5 GPRPLEQVTCYKCGEKGHYANRCTKGHLAFLSGQ
       ::::::::::::::::::::::::::::::::::
XP_011 GPRPLEQVTCYKCGEKGHYANRCTKGHLAFLSGQ
          220       230       240        




269 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 06:27:39 2016 done: Sat Nov  5 06:27:40 2016
 Total Scan time:  7.730 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
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