Result of FASTA (omim) for
pF1KB5208
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5208, 369 aa
1>>>pF1KB5208 369 - 369 aa - 369 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4857+/-0.000505; mu= 15.1363+/- 0.031
mean_var=97.4848+/-24.558, 0's: 0 Z-trim(108.6): 802 B-trim: 1464 in 2/47
Lambda= 0.129899
statistics sampled from 15855 (16753) to 15855 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.54), E-opt: 0.2 (0.196), width: 16
Scan time: 7.410
The best scores are: opt bits E(85289)
NP_001041 (OMIM: 182452) somatostatin receptor typ ( 369) 2430 466.7 3.7e-131
NP_001166031 (OMIM: 182455) somatostatin receptor ( 364) 1289 252.9 8.6e-67
NP_001044 (OMIM: 182455) somatostatin receptor typ ( 364) 1289 252.9 8.6e-67
XP_005261778 (OMIM: 182453) PREDICTED: somatostati ( 418) 1192 234.8 2.8e-61
XP_011528651 (OMIM: 182453) PREDICTED: somatostati ( 418) 1192 234.8 2.8e-61
NP_001265616 (OMIM: 182453) somatostatin receptor ( 418) 1192 234.8 2.8e-61
XP_006724374 (OMIM: 182453) PREDICTED: somatostati ( 418) 1192 234.8 2.8e-61
XP_016884413 (OMIM: 182453) PREDICTED: somatostati ( 418) 1192 234.8 2.8e-61
NP_001042 (OMIM: 182453) somatostatin receptor typ ( 418) 1192 234.8 2.8e-61
XP_016884412 (OMIM: 182453) PREDICTED: somatostati ( 418) 1192 234.8 2.8e-61
NP_001040 (OMIM: 182451) somatostatin receptor typ ( 391) 1143 225.5 1.6e-58
NP_001043 (OMIM: 182454) somatostatin receptor typ ( 388) 1110 219.4 1.1e-56
NP_000905 (OMIM: 600018) mu-type opioid receptor i ( 400) 856 171.8 2.5e-42
NP_001272453 (OMIM: 600018) mu-type opioid recepto ( 493) 856 171.9 2.9e-42
NP_001138751 (OMIM: 600018) mu-type opioid recepto ( 493) 856 171.9 2.9e-42
NP_001138758 (OMIM: 600018) mu-type opioid recepto ( 420) 848 170.3 7.2e-42
NP_001138756 (OMIM: 600018) mu-type opioid recepto ( 403) 847 170.1 8e-42
NP_001008503 (OMIM: 600018) mu-type opioid recepto ( 418) 847 170.1 8.2e-42
NP_001138757 (OMIM: 600018) mu-type opioid recepto ( 389) 846 169.9 8.8e-42
NP_001008504 (OMIM: 600018) mu-type opioid recepto ( 392) 846 169.9 8.9e-42
NP_001138755 (OMIM: 600018) mu-type opioid recepto ( 397) 846 169.9 9e-42
NP_001138754 (OMIM: 600018) mu-type opioid recepto ( 406) 846 169.9 9.1e-42
NP_001272452 (OMIM: 600018) mu-type opioid recepto ( 414) 846 169.9 9.2e-42
NP_001008505 (OMIM: 600018) mu-type opioid recepto ( 446) 846 169.9 9.7e-42
NP_005277 (OMIM: 600731) neuropeptides B/W recepto ( 333) 832 167.2 4.9e-41
NP_000903 (OMIM: 165196) kappa-type opioid recepto ( 380) 829 166.7 7.9e-41
NP_001305426 (OMIM: 165196) kappa-type opioid rece ( 409) 829 166.7 8.3e-41
NP_000902 (OMIM: 165195) delta-type opioid recepto ( 372) 806 162.4 1.5e-39
NP_872588 (OMIM: 602548) nociceptin receptor isofo ( 370) 795 160.3 6.4e-39
NP_000904 (OMIM: 602548) nociceptin receptor isofo ( 370) 795 160.3 6.4e-39
NP_001186948 (OMIM: 602548) nociceptin receptor is ( 370) 795 160.3 6.4e-39
XP_016883343 (OMIM: 602548) PREDICTED: nociceptin ( 370) 795 160.3 6.4e-39
XP_011527130 (OMIM: 602548) PREDICTED: nociceptin ( 388) 795 160.3 6.6e-39
XP_016883342 (OMIM: 602548) PREDICTED: nociceptin ( 388) 795 160.3 6.6e-39
XP_016883341 (OMIM: 602548) PREDICTED: nociceptin ( 388) 795 160.3 6.6e-39
NP_001305782 (OMIM: 602548) nociceptin receptor is ( 399) 795 160.3 6.8e-39
NP_005276 (OMIM: 600730) neuropeptides B/W recepto ( 328) 772 155.9 1.2e-37
NP_001138753 (OMIM: 600018) mu-type opioid recepto ( 319) 764 154.4 3.2e-37
XP_016883344 (OMIM: 602548) PREDICTED: nociceptin ( 365) 745 150.9 4.2e-36
NP_001305783 (OMIM: 602548) nociceptin receptor is ( 365) 745 150.9 4.2e-36
NP_001272455 (OMIM: 600018) mu-type opioid recepto ( 300) 743 150.5 4.7e-36
NP_001138752 (OMIM: 600018) mu-type opioid recepto ( 300) 743 150.5 4.7e-36
XP_016866395 (OMIM: 600018) PREDICTED: mu-type opi ( 300) 743 150.5 4.7e-36
NP_001138759 (OMIM: 600018) mu-type opioid recepto ( 300) 743 150.5 4.7e-36
NP_001272456 (OMIM: 600018) mu-type opioid recepto ( 292) 733 148.6 1.7e-35
NP_001272457 (OMIM: 600018) mu-type opioid recepto ( 314) 733 148.6 1.8e-35
XP_011534158 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 733 148.7 1.9e-35
XP_011534153 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 733 148.7 1.9e-35
XP_011534164 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 733 148.7 1.9e-35
XP_016866393 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 733 148.7 1.9e-35
>>NP_001041 (OMIM: 182452) somatostatin receptor type 2 (369 aa)
initn: 2430 init1: 2430 opt: 2430 Z-score: 2475.7 bits: 466.7 E(85289): 3.7e-131
Smith-Waterman score: 2430; 100.0% identity (100.0% similar) in 369 aa overlap (1-369:1-369)
10 20 30 40 50 60
pF1KB5 MDMADEPLNGSHTWLSIPFDLNGSVVSTNTSNQTEPYYDLTSNAVLTFIYFVVCIIGLCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDMADEPLNGSHTWLSIPFDLNGSVVSTNTSNQTEPYYDLTSNAVLTFIYFVVCIIGLCG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 NTLVIYVILRYAKMKTITNIYILNLAIADELFMLGLPFLAMQVALVHWPFGKAICRVVMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NTLVIYVILRYAKMKTITNIYILNLAIADELFMLGLPFLAMQVALVHWPFGKAICRVVMT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 VDGINQFTSIFCLTVMSIDRYLAVVHPIKSAKWRRPRTAKMITMAVWGVSLLVILPIMIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VDGINQFTSIFCLTVMSIDRYLAVVHPIKSAKWRRPRTAKMITMAVWGVSLLVILPIMIY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 AGLRSNQWGRSSCTINWPGESGAWYTGFIIYTFILGFLVPLTIICLCYLFIIIKVKSSGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AGLRSNQWGRSSCTINWPGESGAWYTGFIIYTFILGFLVPLTIICLCYLFIIIKVKSSGI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 RVGSSKRKKSEKKVTRMVSIVVAVFIFCWLPFYIFNVSSVSMAISPTPALKGMFDFVVVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RVGSSKRKKSEKKVTRMVSIVVAVFIFCWLPFYIFNVSSVSMAISPTPALKGMFDFVVVL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 TYANSCANPILYAFLSDNFKKSFQNVLCLVKVSGTDDGERSDSKQDKSRLNETTETQRTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TYANSCANPILYAFLSDNFKKSFQNVLCLVKVSGTDDGERSDSKQDKSRLNETTETQRTL
310 320 330 340 350 360
pF1KB5 LNGDLQTSI
:::::::::
NP_001 LNGDLQTSI
>>NP_001166031 (OMIM: 182455) somatostatin receptor type (364 aa)
initn: 1278 init1: 654 opt: 1289 Z-score: 1320.1 bits: 252.9 E(85289): 8.6e-67
Smith-Waterman score: 1289; 55.7% identity (79.8% similar) in 336 aa overlap (36-368:32-362)
10 20 30 40 50 60
pF1KB5 EPLNGSHTWLSIPFDLNGSVVSTNTSNQTEPYYDLTSNAVLT-FIYFVVCIIGLCGNTLV
: . . :::. .:..:: :: :::::
NP_001 EPLFPASTPSWNASSPGAASGGGDNRTLVGPAPSAGARAVLVPVLYLLVCAAGLGGNTLV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 IYVILRYAKMKTITNIYILNLAIADELFMLGLPFLAMQVALVHWPFGKAICRVVMTVDGI
:::.::.:::::.:::::::::.:: :.:::::::: : : :::: ..::.:::.::.
NP_001 IYVVLRFAKMKTVTNIYILNLAVADVLYMLGLPFLATQNAASFWPFGPVLCRLVMTLDGV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 NQFTSIFCLTVMSIDRYLAVVHPIKSAKWRRPRTAKMITMAVWGVSLLVILPIMIYAGLR
:::::.:::::::.:::::::::..::.:::::.::. . :.: .:: . ::....: .
NP_001 NQFTSVFCLTVMSVDRYLAVVHPLSSARWRRPRVAKLASAAAWVLSLCMSLPLLVFADV-
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 SNQWGRSSCTINWPGESGAWYTGFIIYTFILGFLVPLTIICLCYLFIIIKVKSSGIRVGS
: : ..:. .:: : : . ::::: .:::..:: .::::::.:..::...:.:::
NP_001 --QEG-GTCNASWPEPVGLWGAVFIIYTAVLGFFAPLLVICLCYLLIVVKVRAAGVRVGC
190 200 210 220 230
250 260 270 280 290 300
pF1KB5 SKRKKSEKKVTRMVSIVVAVFIFCWLPFYIFNVSSVSMAISPTPALKGMFDFVVVLTYAN
.:. ::.:::::: .:: :: :::::. :. ....:. :: :.. :::.:.:::
NP_001 VRRR-SERKVTRMVLVVVLVFAGCWLPFFTVNIVNLAVALPQEPASAGLYFFVVILSYAN
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB5 SCANPILYAFLSDNFKKSFQNVLCLVKVSGTDDGERSDSKQDKSRLNE--TTETQRTLLN
:::::.::.::::::..:::.:::: : ::. :.. .. . :. : .. : ..:. :
NP_001 SCANPVLYGFLSDNFRQSFQKVLCLRKGSGAKDADATEPRPDRIRQQQEATPPAHRAAAN
300 310 320 330 340 350
pF1KB5 GDLQTSI
: .:::
NP_001 GLMQTSKL
360
>>NP_001044 (OMIM: 182455) somatostatin receptor type 5 (364 aa)
initn: 1278 init1: 654 opt: 1289 Z-score: 1320.1 bits: 252.9 E(85289): 8.6e-67
Smith-Waterman score: 1289; 55.7% identity (79.8% similar) in 336 aa overlap (36-368:32-362)
10 20 30 40 50 60
pF1KB5 EPLNGSHTWLSIPFDLNGSVVSTNTSNQTEPYYDLTSNAVLT-FIYFVVCIIGLCGNTLV
: . . :::. .:..:: :: :::::
NP_001 EPLFPASTPSWNASSPGAASGGGDNRTLVGPAPSAGARAVLVPVLYLLVCAAGLGGNTLV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 IYVILRYAKMKTITNIYILNLAIADELFMLGLPFLAMQVALVHWPFGKAICRVVMTVDGI
:::.::.:::::.:::::::::.:: :.:::::::: : : :::: ..::.:::.::.
NP_001 IYVVLRFAKMKTVTNIYILNLAVADVLYMLGLPFLATQNAASFWPFGPVLCRLVMTLDGV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 NQFTSIFCLTVMSIDRYLAVVHPIKSAKWRRPRTAKMITMAVWGVSLLVILPIMIYAGLR
:::::.:::::::.:::::::::..::.:::::.::. . :.: .:: . ::....: .
NP_001 NQFTSVFCLTVMSVDRYLAVVHPLSSARWRRPRVAKLASAAAWVLSLCMSLPLLVFADV-
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 SNQWGRSSCTINWPGESGAWYTGFIIYTFILGFLVPLTIICLCYLFIIIKVKSSGIRVGS
: : ..:. .:: : : . ::::: .:::..:: .::::::.:..::...:.:::
NP_001 --QEG-GTCNASWPEPVGLWGAVFIIYTAVLGFFAPLLVICLCYLLIVVKVRAAGVRVGC
190 200 210 220 230
250 260 270 280 290 300
pF1KB5 SKRKKSEKKVTRMVSIVVAVFIFCWLPFYIFNVSSVSMAISPTPALKGMFDFVVVLTYAN
.:. ::.:::::: .:: :: :::::. :. ....:. :: :.. :::.:.:::
NP_001 VRRR-SERKVTRMVLVVVLVFAGCWLPFFTVNIVNLAVALPQEPASAGLYFFVVILSYAN
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB5 SCANPILYAFLSDNFKKSFQNVLCLVKVSGTDDGERSDSKQDKSRLNE--TTETQRTLLN
:::::.::.::::::..:::.:::: : ::. :.. .. . :. : .. : ..:. :
NP_001 SCANPVLYGFLSDNFRQSFQKVLCLRKGSGAKDADATEPRPDRIRQQQEATPPAHRAAAN
300 310 320 330 340 350
pF1KB5 GDLQTSI
: .:::
NP_001 GLMQTSKL
360
>>XP_005261778 (OMIM: 182453) PREDICTED: somatostatin re (418 aa)
initn: 914 init1: 914 opt: 1192 Z-score: 1221.1 bits: 234.8 E(85289): 2.8e-61
Smith-Waterman score: 1192; 53.2% identity (78.8% similar) in 325 aa overlap (6-327:14-328)
10 20 30 40 50
pF1KB5 MDMADEPLNGSHTWLSIPFDLNGSVVSTNTSNQTEPYYDLTSNAVLTFIYFV
:: :.: .: : : . . ::.. : : .:.... ..:.:
XP_005 MDMLHPSSVSTTSEPENASSAW---PPDATLGNVSAGPS----PAGLAVSGVLIPLVYLV
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 VCIIGLCGNTLVIYVILRYAKMKTITNIYILNLAIADELFMLGLPFLAMQVALVHWPFGK
::..:: ::.:::::.::.. ..::.::::::.::::::::::::: : :: .::::.
XP_005 VCVVGLLGNSLVIYVVLRHTASPSVTNVYILNLALADELFMLGLPFLAAQNALSYWPFGS
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 AICRVVMTVDGINQFTSIFCLTVMSIDRYLAVVHPIKSAKWRRPRTAKMITMAVWGVSLL
.::.::.:::::::::::::::::.::::::::: .::.:: .:. .. ::: .: .
XP_005 LMCRLVMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVASAV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 VILPIMIYAGLRSNQWGRSSCTINWPGESGAWYTGFIIYTFILGFLVPLTIICLCYLFII
:.::.....:. : :.: ..:: ..:: .:::::: :::. :: .::::::.:.
XP_005 VVLPVVVFSGV---PRGMSTCHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYLLIV
180 190 200 210 220 230
240 250 260 270 280
pF1KB5 IKVKSSGIRV---GSSKRKKSEKKVTRMVSIVVAVFIFCWLPFYIFNVSSVSMAISPTPA
.::.:.: :: . ..:..::..::::: :::.:..::.:::..:. .: . ::
XP_005 VKVRSAGRRVWAPSCQRRRRSERRVTRMVVAVVALFVLCWMPFYVLNIVNVVCPLPEEPA
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB5 LKGMFDFVVVLTYANSCANPILYAFLSDNFKKSFQNVLCLVKVSGTDDGERSDSKQDKSR
. :.. .::.: :::::::::::.::: ::..:. ::
XP_005 FFGLYFLVVALPYANSCANPILYGFLSYRFKQGFRRVLLRPSRRVRSQEPTVGPPEKTEE
300 310 320 330 340 350
350 360
pF1KB5 LNETTETQRTLLNGDLQTSI
XP_005 EDEEEEDGEESREGGKGKEMNGRVSQITQPGTSGQERPPSRVASKEQQLLPQEASTGEKS
360 370 380 390 400 410
>>XP_011528651 (OMIM: 182453) PREDICTED: somatostatin re (418 aa)
initn: 914 init1: 914 opt: 1192 Z-score: 1221.1 bits: 234.8 E(85289): 2.8e-61
Smith-Waterman score: 1192; 53.2% identity (78.8% similar) in 325 aa overlap (6-327:14-328)
10 20 30 40 50
pF1KB5 MDMADEPLNGSHTWLSIPFDLNGSVVSTNTSNQTEPYYDLTSNAVLTFIYFV
:: :.: .: : : . . ::.. : : .:.... ..:.:
XP_011 MDMLHPSSVSTTSEPENASSAW---PPDATLGNVSAGPS----PAGLAVSGVLIPLVYLV
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 VCIIGLCGNTLVIYVILRYAKMKTITNIYILNLAIADELFMLGLPFLAMQVALVHWPFGK
::..:: ::.:::::.::.. ..::.::::::.::::::::::::: : :: .::::.
XP_011 VCVVGLLGNSLVIYVVLRHTASPSVTNVYILNLALADELFMLGLPFLAAQNALSYWPFGS
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 AICRVVMTVDGINQFTSIFCLTVMSIDRYLAVVHPIKSAKWRRPRTAKMITMAVWGVSLL
.::.::.:::::::::::::::::.::::::::: .::.:: .:. .. ::: .: .
XP_011 LMCRLVMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVASAV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 VILPIMIYAGLRSNQWGRSSCTINWPGESGAWYTGFIIYTFILGFLVPLTIICLCYLFII
:.::.....:. : :.: ..:: ..:: .:::::: :::. :: .::::::.:.
XP_011 VVLPVVVFSGV---PRGMSTCHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYLLIV
180 190 200 210 220 230
240 250 260 270 280
pF1KB5 IKVKSSGIRV---GSSKRKKSEKKVTRMVSIVVAVFIFCWLPFYIFNVSSVSMAISPTPA
.::.:.: :: . ..:..::..::::: :::.:..::.:::..:. .: . ::
XP_011 VKVRSAGRRVWAPSCQRRRRSERRVTRMVVAVVALFVLCWMPFYVLNIVNVVCPLPEEPA
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB5 LKGMFDFVVVLTYANSCANPILYAFLSDNFKKSFQNVLCLVKVSGTDDGERSDSKQDKSR
. :.. .::.: :::::::::::.::: ::..:. ::
XP_011 FFGLYFLVVALPYANSCANPILYGFLSYRFKQGFRRVLLRPSRRVRSQEPTVGPPEKTEE
300 310 320 330 340 350
350 360
pF1KB5 LNETTETQRTLLNGDLQTSI
XP_011 EDEEEEDGEESREGGKGKEMNGRVSQITQPGTSGQERPPSRVASKEQQLLPQEASTGEKS
360 370 380 390 400 410
>>NP_001265616 (OMIM: 182453) somatostatin receptor type (418 aa)
initn: 914 init1: 914 opt: 1192 Z-score: 1221.1 bits: 234.8 E(85289): 2.8e-61
Smith-Waterman score: 1192; 53.2% identity (78.8% similar) in 325 aa overlap (6-327:14-328)
10 20 30 40 50
pF1KB5 MDMADEPLNGSHTWLSIPFDLNGSVVSTNTSNQTEPYYDLTSNAVLTFIYFV
:: :.: .: : : . . ::.. : : .:.... ..:.:
NP_001 MDMLHPSSVSTTSEPENASSAW---PPDATLGNVSAGPS----PAGLAVSGVLIPLVYLV
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 VCIIGLCGNTLVIYVILRYAKMKTITNIYILNLAIADELFMLGLPFLAMQVALVHWPFGK
::..:: ::.:::::.::.. ..::.::::::.::::::::::::: : :: .::::.
NP_001 VCVVGLLGNSLVIYVVLRHTASPSVTNVYILNLALADELFMLGLPFLAAQNALSYWPFGS
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 AICRVVMTVDGINQFTSIFCLTVMSIDRYLAVVHPIKSAKWRRPRTAKMITMAVWGVSLL
.::.::.:::::::::::::::::.::::::::: .::.:: .:. .. ::: .: .
NP_001 LMCRLVMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVASAV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 VILPIMIYAGLRSNQWGRSSCTINWPGESGAWYTGFIIYTFILGFLVPLTIICLCYLFII
:.::.....:. : :.: ..:: ..:: .:::::: :::. :: .::::::.:.
NP_001 VVLPVVVFSGV---PRGMSTCHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYLLIV
180 190 200 210 220 230
240 250 260 270 280
pF1KB5 IKVKSSGIRV---GSSKRKKSEKKVTRMVSIVVAVFIFCWLPFYIFNVSSVSMAISPTPA
.::.:.: :: . ..:..::..::::: :::.:..::.:::..:. .: . ::
NP_001 VKVRSAGRRVWAPSCQRRRRSERRVTRMVVAVVALFVLCWMPFYVLNIVNVVCPLPEEPA
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB5 LKGMFDFVVVLTYANSCANPILYAFLSDNFKKSFQNVLCLVKVSGTDDGERSDSKQDKSR
. :.. .::.: :::::::::::.::: ::..:. ::
NP_001 FFGLYFLVVALPYANSCANPILYGFLSYRFKQGFRRVLLRPSRRVRSQEPTVGPPEKTEE
300 310 320 330 340 350
350 360
pF1KB5 LNETTETQRTLLNGDLQTSI
NP_001 EDEEEEDGEESREGGKGKEMNGRVSQITQPGTSGQERPPSRVASKEQQLLPQEASTGEKS
360 370 380 390 400 410
>>XP_006724374 (OMIM: 182453) PREDICTED: somatostatin re (418 aa)
initn: 914 init1: 914 opt: 1192 Z-score: 1221.1 bits: 234.8 E(85289): 2.8e-61
Smith-Waterman score: 1192; 53.2% identity (78.8% similar) in 325 aa overlap (6-327:14-328)
10 20 30 40 50
pF1KB5 MDMADEPLNGSHTWLSIPFDLNGSVVSTNTSNQTEPYYDLTSNAVLTFIYFV
:: :.: .: : : . . ::.. : : .:.... ..:.:
XP_006 MDMLHPSSVSTTSEPENASSAW---PPDATLGNVSAGPS----PAGLAVSGVLIPLVYLV
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 VCIIGLCGNTLVIYVILRYAKMKTITNIYILNLAIADELFMLGLPFLAMQVALVHWPFGK
::..:: ::.:::::.::.. ..::.::::::.::::::::::::: : :: .::::.
XP_006 VCVVGLLGNSLVIYVVLRHTASPSVTNVYILNLALADELFMLGLPFLAAQNALSYWPFGS
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 AICRVVMTVDGINQFTSIFCLTVMSIDRYLAVVHPIKSAKWRRPRTAKMITMAVWGVSLL
.::.::.:::::::::::::::::.::::::::: .::.:: .:. .. ::: .: .
XP_006 LMCRLVMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVASAV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 VILPIMIYAGLRSNQWGRSSCTINWPGESGAWYTGFIIYTFILGFLVPLTIICLCYLFII
:.::.....:. : :.: ..:: ..:: .:::::: :::. :: .::::::.:.
XP_006 VVLPVVVFSGV---PRGMSTCHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYLLIV
180 190 200 210 220 230
240 250 260 270 280
pF1KB5 IKVKSSGIRV---GSSKRKKSEKKVTRMVSIVVAVFIFCWLPFYIFNVSSVSMAISPTPA
.::.:.: :: . ..:..::..::::: :::.:..::.:::..:. .: . ::
XP_006 VKVRSAGRRVWAPSCQRRRRSERRVTRMVVAVVALFVLCWMPFYVLNIVNVVCPLPEEPA
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB5 LKGMFDFVVVLTYANSCANPILYAFLSDNFKKSFQNVLCLVKVSGTDDGERSDSKQDKSR
. :.. .::.: :::::::::::.::: ::..:. ::
XP_006 FFGLYFLVVALPYANSCANPILYGFLSYRFKQGFRRVLLRPSRRVRSQEPTVGPPEKTEE
300 310 320 330 340 350
350 360
pF1KB5 LNETTETQRTLLNGDLQTSI
XP_006 EDEEEEDGEESREGGKGKEMNGRVSQITQPGTSGQERPPSRVASKEQQLLPQEASTGEKS
360 370 380 390 400 410
>>XP_016884413 (OMIM: 182453) PREDICTED: somatostatin re (418 aa)
initn: 914 init1: 914 opt: 1192 Z-score: 1221.1 bits: 234.8 E(85289): 2.8e-61
Smith-Waterman score: 1192; 53.2% identity (78.8% similar) in 325 aa overlap (6-327:14-328)
10 20 30 40 50
pF1KB5 MDMADEPLNGSHTWLSIPFDLNGSVVSTNTSNQTEPYYDLTSNAVLTFIYFV
:: :.: .: : : . . ::.. : : .:.... ..:.:
XP_016 MDMLHPSSVSTTSEPENASSAW---PPDATLGNVSAGPS----PAGLAVSGVLIPLVYLV
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 VCIIGLCGNTLVIYVILRYAKMKTITNIYILNLAIADELFMLGLPFLAMQVALVHWPFGK
::..:: ::.:::::.::.. ..::.::::::.::::::::::::: : :: .::::.
XP_016 VCVVGLLGNSLVIYVVLRHTASPSVTNVYILNLALADELFMLGLPFLAAQNALSYWPFGS
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 AICRVVMTVDGINQFTSIFCLTVMSIDRYLAVVHPIKSAKWRRPRTAKMITMAVWGVSLL
.::.::.:::::::::::::::::.::::::::: .::.:: .:. .. ::: .: .
XP_016 LMCRLVMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVASAV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 VILPIMIYAGLRSNQWGRSSCTINWPGESGAWYTGFIIYTFILGFLVPLTIICLCYLFII
:.::.....:. : :.: ..:: ..:: .:::::: :::. :: .::::::.:.
XP_016 VVLPVVVFSGV---PRGMSTCHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYLLIV
180 190 200 210 220 230
240 250 260 270 280
pF1KB5 IKVKSSGIRV---GSSKRKKSEKKVTRMVSIVVAVFIFCWLPFYIFNVSSVSMAISPTPA
.::.:.: :: . ..:..::..::::: :::.:..::.:::..:. .: . ::
XP_016 VKVRSAGRRVWAPSCQRRRRSERRVTRMVVAVVALFVLCWMPFYVLNIVNVVCPLPEEPA
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB5 LKGMFDFVVVLTYANSCANPILYAFLSDNFKKSFQNVLCLVKVSGTDDGERSDSKQDKSR
. :.. .::.: :::::::::::.::: ::..:. ::
XP_016 FFGLYFLVVALPYANSCANPILYGFLSYRFKQGFRRVLLRPSRRVRSQEPTVGPPEKTEE
300 310 320 330 340 350
350 360
pF1KB5 LNETTETQRTLLNGDLQTSI
XP_016 EDEEEEDGEESREGGKGKEMNGRVSQITQPGTSGQERPPSRVASKEQQLLPQEASTGEKS
360 370 380 390 400 410
>>NP_001042 (OMIM: 182453) somatostatin receptor type 3 (418 aa)
initn: 914 init1: 914 opt: 1192 Z-score: 1221.1 bits: 234.8 E(85289): 2.8e-61
Smith-Waterman score: 1192; 53.2% identity (78.8% similar) in 325 aa overlap (6-327:14-328)
10 20 30 40 50
pF1KB5 MDMADEPLNGSHTWLSIPFDLNGSVVSTNTSNQTEPYYDLTSNAVLTFIYFV
:: :.: .: : : . . ::.. : : .:.... ..:.:
NP_001 MDMLHPSSVSTTSEPENASSAW---PPDATLGNVSAGPS----PAGLAVSGVLIPLVYLV
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 VCIIGLCGNTLVIYVILRYAKMKTITNIYILNLAIADELFMLGLPFLAMQVALVHWPFGK
::..:: ::.:::::.::.. ..::.::::::.::::::::::::: : :: .::::.
NP_001 VCVVGLLGNSLVIYVVLRHTASPSVTNVYILNLALADELFMLGLPFLAAQNALSYWPFGS
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 AICRVVMTVDGINQFTSIFCLTVMSIDRYLAVVHPIKSAKWRRPRTAKMITMAVWGVSLL
.::.::.:::::::::::::::::.::::::::: .::.:: .:. .. ::: .: .
NP_001 LMCRLVMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVASAV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 VILPIMIYAGLRSNQWGRSSCTINWPGESGAWYTGFIIYTFILGFLVPLTIICLCYLFII
:.::.....:. : :.: ..:: ..:: .:::::: :::. :: .::::::.:.
NP_001 VVLPVVVFSGV---PRGMSTCHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYLLIV
180 190 200 210 220 230
240 250 260 270 280
pF1KB5 IKVKSSGIRV---GSSKRKKSEKKVTRMVSIVVAVFIFCWLPFYIFNVSSVSMAISPTPA
.::.:.: :: . ..:..::..::::: :::.:..::.:::..:. .: . ::
NP_001 VKVRSAGRRVWAPSCQRRRRSERRVTRMVVAVVALFVLCWMPFYVLNIVNVVCPLPEEPA
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB5 LKGMFDFVVVLTYANSCANPILYAFLSDNFKKSFQNVLCLVKVSGTDDGERSDSKQDKSR
. :.. .::.: :::::::::::.::: ::..:. ::
NP_001 FFGLYFLVVALPYANSCANPILYGFLSYRFKQGFRRVLLRPSRRVRSQEPTVGPPEKTEE
300 310 320 330 340 350
350 360
pF1KB5 LNETTETQRTLLNGDLQTSI
NP_001 EDEEEEDGEESREGGKGKEMNGRVSQITQPGTSGQERPPSRVASKEQQLLPQEASTGEKS
360 370 380 390 400 410
>>XP_016884412 (OMIM: 182453) PREDICTED: somatostatin re (418 aa)
initn: 914 init1: 914 opt: 1192 Z-score: 1221.1 bits: 234.8 E(85289): 2.8e-61
Smith-Waterman score: 1192; 53.2% identity (78.8% similar) in 325 aa overlap (6-327:14-328)
10 20 30 40 50
pF1KB5 MDMADEPLNGSHTWLSIPFDLNGSVVSTNTSNQTEPYYDLTSNAVLTFIYFV
:: :.: .: : : . . ::.. : : .:.... ..:.:
XP_016 MDMLHPSSVSTTSEPENASSAW---PPDATLGNVSAGPS----PAGLAVSGVLIPLVYLV
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 VCIIGLCGNTLVIYVILRYAKMKTITNIYILNLAIADELFMLGLPFLAMQVALVHWPFGK
::..:: ::.:::::.::.. ..::.::::::.::::::::::::: : :: .::::.
XP_016 VCVVGLLGNSLVIYVVLRHTASPSVTNVYILNLALADELFMLGLPFLAAQNALSYWPFGS
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 AICRVVMTVDGINQFTSIFCLTVMSIDRYLAVVHPIKSAKWRRPRTAKMITMAVWGVSLL
.::.::.:::::::::::::::::.::::::::: .::.:: .:. .. ::: .: .
XP_016 LMCRLVMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVASAV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 VILPIMIYAGLRSNQWGRSSCTINWPGESGAWYTGFIIYTFILGFLVPLTIICLCYLFII
:.::.....:. : :.: ..:: ..:: .:::::: :::. :: .::::::.:.
XP_016 VVLPVVVFSGV---PRGMSTCHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYLLIV
180 190 200 210 220 230
240 250 260 270 280
pF1KB5 IKVKSSGIRV---GSSKRKKSEKKVTRMVSIVVAVFIFCWLPFYIFNVSSVSMAISPTPA
.::.:.: :: . ..:..::..::::: :::.:..::.:::..:. .: . ::
XP_016 VKVRSAGRRVWAPSCQRRRRSERRVTRMVVAVVALFVLCWMPFYVLNIVNVVCPLPEEPA
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB5 LKGMFDFVVVLTYANSCANPILYAFLSDNFKKSFQNVLCLVKVSGTDDGERSDSKQDKSR
. :.. .::.: :::::::::::.::: ::..:. ::
XP_016 FFGLYFLVVALPYANSCANPILYGFLSYRFKQGFRRVLLRPSRRVRSQEPTVGPPEKTEE
300 310 320 330 340 350
350 360
pF1KB5 LNETTETQRTLLNGDLQTSI
XP_016 EDEEEEDGEESREGGKGKEMNGRVSQITQPGTSGQERPPSRVASKEQQLLPQEASTGEKS
360 370 380 390 400 410
369 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 16:20:01 2016 done: Thu Nov 3 16:20:02 2016
Total Scan time: 7.410 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]