Result of FASTA (omim) for
pF1KB5211
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5211, 378 aa
1>>>pF1KB5211 378 - 378 aa - 378 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9333+/-0.000398; mu= 18.3897+/- 0.025
mean_var=65.3167+/-13.523, 0's: 0 Z-trim(112.1): 70 B-trim: 964 in 2/52
Lambda= 0.158695
statistics sampled from 20845 (20925) to 20845 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.617), E-opt: 0.2 (0.245), width: 16
Scan time: 7.910
The best scores are: opt bits E(85289)
NP_002174 (OMIM: 308385,430000) interleukin-3 rece ( 378) 2607 605.9 4.8e-173
XP_005274837 (OMIM: 308385,430000) PREDICTED: inte ( 378) 2607 605.9 4.8e-173
XP_005274488 (OMIM: 308385,430000) PREDICTED: inte ( 378) 2607 605.9 4.8e-173
XP_016884980 (OMIM: 308385,430000) PREDICTED: inte ( 377) 2584 600.7 1.8e-171
XP_005274489 (OMIM: 308385,430000) PREDICTED: inte ( 377) 2584 600.7 1.8e-171
XP_016885532 (OMIM: 308385,430000) PREDICTED: inte ( 377) 2584 600.7 1.8e-171
XP_005274838 (OMIM: 308385,430000) PREDICTED: inte ( 377) 2584 600.7 1.8e-171
NP_001254642 (OMIM: 308385,430000) interleukin-3 r ( 300) 1926 450.0 3.4e-126
NP_006131 (OMIM: 306250,425000) granulocyte-macrop ( 400) 590 144.2 5.1e-34
NP_001155001 (OMIM: 306250,425000) granulocyte-mac ( 400) 590 144.2 5.1e-34
XP_011544468 (OMIM: 306250,425000) PREDICTED: gran ( 400) 590 144.2 5.1e-34
NP_758448 (OMIM: 306250,425000) granulocyte-macrop ( 400) 590 144.2 5.1e-34
XP_011543921 (OMIM: 306250,425000) PREDICTED: gran ( 400) 590 144.2 5.1e-34
XP_011543924 (OMIM: 306250,425000) PREDICTED: gran ( 385) 568 139.1 1.6e-32
XP_011544471 (OMIM: 306250,425000) PREDICTED: gran ( 385) 568 139.1 1.6e-32
XP_011544469 (OMIM: 306250,425000) PREDICTED: gran ( 389) 568 139.1 1.7e-32
XP_011543922 (OMIM: 306250,425000) PREDICTED: gran ( 389) 568 139.1 1.7e-32
XP_011543923 (OMIM: 306250,425000) PREDICTED: gran ( 386) 567 138.9 1.9e-32
XP_011544470 (OMIM: 306250,425000) PREDICTED: gran ( 386) 567 138.9 1.9e-32
XP_011543925 (OMIM: 306250,425000) PREDICTED: gran ( 383) 566 138.7 2.2e-32
XP_016885517 (OMIM: 306250,425000) PREDICTED: gran ( 383) 566 138.7 2.2e-32
XP_011544472 (OMIM: 306250,425000) PREDICTED: gran ( 383) 566 138.7 2.2e-32
XP_016884776 (OMIM: 306250,425000) PREDICTED: gran ( 383) 566 138.7 2.2e-32
XP_011543920 (OMIM: 306250,425000) PREDICTED: gran ( 410) 566 138.7 2.4e-32
NP_001155003 (OMIM: 306250,425000) granulocyte-mac ( 410) 566 138.7 2.4e-32
XP_011544467 (OMIM: 306250,425000) PREDICTED: gran ( 410) 566 138.7 2.4e-32
NP_758449 (OMIM: 306250,425000) granulocyte-macrop ( 377) 472 117.1 6.7e-26
NP_758450 (OMIM: 306250,425000) granulocyte-macrop ( 333) 471 116.9 7.1e-26
XP_016885518 (OMIM: 306250,425000) PREDICTED: gran ( 333) 471 116.9 7.1e-26
XP_011544477 (OMIM: 306250,425000) PREDICTED: gran ( 333) 471 116.9 7.1e-26
XP_011543930 (OMIM: 306250,425000) PREDICTED: gran ( 333) 471 116.9 7.1e-26
XP_016884777 (OMIM: 306250,425000) PREDICTED: gran ( 333) 471 116.9 7.1e-26
XP_011543929 (OMIM: 306250,425000) PREDICTED: gran ( 333) 471 116.9 7.1e-26
XP_011544475 (OMIM: 306250,425000) PREDICTED: gran ( 333) 471 116.9 7.1e-26
XP_011544476 (OMIM: 306250,425000) PREDICTED: gran ( 333) 471 116.9 7.1e-26
XP_011543928 (OMIM: 306250,425000) PREDICTED: gran ( 333) 471 116.9 7.1e-26
NP_001155002 (OMIM: 306250,425000) granulocyte-mac ( 434) 471 116.9 8.7e-26
NP_001155004 (OMIM: 306250,425000) granulocyte-mac ( 267) 442 110.2 5.9e-24
NP_758452 (OMIM: 306250,425000) granulocyte-macrop ( 233) 364 92.3 1.3e-18
NP_783853 (OMIM: 147851) interleukin-5 receptor su ( 420) 294 76.4 1.3e-13
NP_000555 (OMIM: 147851) interleukin-5 receptor su ( 420) 294 76.4 1.3e-13
XP_011531980 (OMIM: 147851) PREDICTED: interleukin ( 439) 286 74.6 5e-13
XP_011531979 (OMIM: 147851) PREDICTED: interleukin ( 439) 286 74.6 5e-13
NP_001230028 (OMIM: 147851) interleukin-5 receptor ( 378) 246 65.4 2.5e-10
NP_783854 (OMIM: 147851) interleukin-5 receptor su ( 333) 226 60.8 5.4e-09
NP_783851 (OMIM: 147851) interleukin-5 receptor su ( 333) 226 60.8 5.4e-09
NP_783852 (OMIM: 147851) interleukin-5 receptor su ( 335) 226 60.8 5.5e-09
NP_783855 (OMIM: 147851) interleukin-5 receptor su ( 335) 226 60.8 5.5e-09
NP_000631 (OMIM: 300130) interleukin-13 receptor s ( 380) 200 54.9 3.7e-07
NP_000386 (OMIM: 138981,614370) cytokine receptor ( 897) 168 47.8 0.00012
>>NP_002174 (OMIM: 308385,430000) interleukin-3 receptor (378 aa)
initn: 2607 init1: 2607 opt: 2607 Z-score: 3227.7 bits: 605.9 E(85289): 4.8e-173
Smith-Waterman score: 2607; 100.0% identity (100.0% similar) in 378 aa overlap (1-378:1-378)
10 20 30 40 50 60
pF1KB5 MVLLWLTLLLIALPCLLQTKEDPNPPITNLRMKAKAQQLTWDLNRNVTDIECVKDADYSM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MVLLWLTLLLIALPCLLQTKEDPNPPITNLRMKAKAQQLTWDLNRNVTDIECVKDADYSM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 PAVNNSYCQFGAISLCEVTNYTVRVANPPFSTWILFPENSGKPWAGAENLTCWIHDVDFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 PAVNNSYCQFGAISLCEVTNYTVRVANPPFSTWILFPENSGKPWAGAENLTCWIHDVDFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 SCSWAVGPGAPADVQYDLYLNVANRRQQYECLHYKTDAQGTRIGCRFDDISRLSSGSQSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 SCSWAVGPGAPADVQYDLYLNVANRRQQYECLHYKTDAQGTRIGCRFDDISRLSSGSQSS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 HILVRGRSAAFGIPCTDKFVVFSQIEILTPPNMTAKCNKTHSFMHWKMRSHFNRKFRYEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 HILVRGRSAAFGIPCTDKFVVFSQIEILTPPNMTAKCNKTHSFMHWKMRSHFNRKFRYEL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 QIQKRMQPVITEQVRDRTSFQLLNPGTYTVQIRARERVYEFLSAWSTPQRFECDQEEGAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 QIQKRMQPVITEQVRDRTSFQLLNPGTYTVQIRARERVYEFLSAWSTPQRFECDQEEGAN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 TRAWRTSLLIALGTLLALVCVFVICRRYLVMQRLFPRIPHMKDPIGDSFQNDKLVVWEAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 TRAWRTSLLIALGTLLALVCVFVICRRYLVMQRLFPRIPHMKDPIGDSFQNDKLVVWEAG
310 320 330 340 350 360
370
pF1KB5 KAGLEECLVTEVQVVQKT
::::::::::::::::::
NP_002 KAGLEECLVTEVQVVQKT
370
>>XP_005274837 (OMIM: 308385,430000) PREDICTED: interleu (378 aa)
initn: 2607 init1: 2607 opt: 2607 Z-score: 3227.7 bits: 605.9 E(85289): 4.8e-173
Smith-Waterman score: 2607; 100.0% identity (100.0% similar) in 378 aa overlap (1-378:1-378)
10 20 30 40 50 60
pF1KB5 MVLLWLTLLLIALPCLLQTKEDPNPPITNLRMKAKAQQLTWDLNRNVTDIECVKDADYSM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MVLLWLTLLLIALPCLLQTKEDPNPPITNLRMKAKAQQLTWDLNRNVTDIECVKDADYSM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 PAVNNSYCQFGAISLCEVTNYTVRVANPPFSTWILFPENSGKPWAGAENLTCWIHDVDFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PAVNNSYCQFGAISLCEVTNYTVRVANPPFSTWILFPENSGKPWAGAENLTCWIHDVDFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 SCSWAVGPGAPADVQYDLYLNVANRRQQYECLHYKTDAQGTRIGCRFDDISRLSSGSQSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SCSWAVGPGAPADVQYDLYLNVANRRQQYECLHYKTDAQGTRIGCRFDDISRLSSGSQSS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 HILVRGRSAAFGIPCTDKFVVFSQIEILTPPNMTAKCNKTHSFMHWKMRSHFNRKFRYEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HILVRGRSAAFGIPCTDKFVVFSQIEILTPPNMTAKCNKTHSFMHWKMRSHFNRKFRYEL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 QIQKRMQPVITEQVRDRTSFQLLNPGTYTVQIRARERVYEFLSAWSTPQRFECDQEEGAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QIQKRMQPVITEQVRDRTSFQLLNPGTYTVQIRARERVYEFLSAWSTPQRFECDQEEGAN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 TRAWRTSLLIALGTLLALVCVFVICRRYLVMQRLFPRIPHMKDPIGDSFQNDKLVVWEAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TRAWRTSLLIALGTLLALVCVFVICRRYLVMQRLFPRIPHMKDPIGDSFQNDKLVVWEAG
310 320 330 340 350 360
370
pF1KB5 KAGLEECLVTEVQVVQKT
::::::::::::::::::
XP_005 KAGLEECLVTEVQVVQKT
370
>>XP_005274488 (OMIM: 308385,430000) PREDICTED: interleu (378 aa)
initn: 2607 init1: 2607 opt: 2607 Z-score: 3227.7 bits: 605.9 E(85289): 4.8e-173
Smith-Waterman score: 2607; 100.0% identity (100.0% similar) in 378 aa overlap (1-378:1-378)
10 20 30 40 50 60
pF1KB5 MVLLWLTLLLIALPCLLQTKEDPNPPITNLRMKAKAQQLTWDLNRNVTDIECVKDADYSM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MVLLWLTLLLIALPCLLQTKEDPNPPITNLRMKAKAQQLTWDLNRNVTDIECVKDADYSM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 PAVNNSYCQFGAISLCEVTNYTVRVANPPFSTWILFPENSGKPWAGAENLTCWIHDVDFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PAVNNSYCQFGAISLCEVTNYTVRVANPPFSTWILFPENSGKPWAGAENLTCWIHDVDFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 SCSWAVGPGAPADVQYDLYLNVANRRQQYECLHYKTDAQGTRIGCRFDDISRLSSGSQSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SCSWAVGPGAPADVQYDLYLNVANRRQQYECLHYKTDAQGTRIGCRFDDISRLSSGSQSS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 HILVRGRSAAFGIPCTDKFVVFSQIEILTPPNMTAKCNKTHSFMHWKMRSHFNRKFRYEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HILVRGRSAAFGIPCTDKFVVFSQIEILTPPNMTAKCNKTHSFMHWKMRSHFNRKFRYEL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 QIQKRMQPVITEQVRDRTSFQLLNPGTYTVQIRARERVYEFLSAWSTPQRFECDQEEGAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QIQKRMQPVITEQVRDRTSFQLLNPGTYTVQIRARERVYEFLSAWSTPQRFECDQEEGAN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 TRAWRTSLLIALGTLLALVCVFVICRRYLVMQRLFPRIPHMKDPIGDSFQNDKLVVWEAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TRAWRTSLLIALGTLLALVCVFVICRRYLVMQRLFPRIPHMKDPIGDSFQNDKLVVWEAG
310 320 330 340 350 360
370
pF1KB5 KAGLEECLVTEVQVVQKT
::::::::::::::::::
XP_005 KAGLEECLVTEVQVVQKT
370
>>XP_016884980 (OMIM: 308385,430000) PREDICTED: interleu (377 aa)
initn: 1590 init1: 1590 opt: 2584 Z-score: 3199.3 bits: 600.7 E(85289): 1.8e-171
Smith-Waterman score: 2584; 99.5% identity (99.7% similar) in 378 aa overlap (1-378:1-377)
10 20 30 40 50 60
pF1KB5 MVLLWLTLLLIALPCLLQTKEDPNPPITNLRMKAKAQQLTWDLNRNVTDIECVKDADYSM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MVLLWLTLLLIALPCLLQTKEDPNPPITNLRMKAKAQQLTWDLNRNVTDIECVKDADYSM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 PAVNNSYCQFGAISLCEVTNYTVRVANPPFSTWILFPENSGKPWAGAENLTCWIHDVDFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PAVNNSYCQFGAISLCEVTNYTVRVANPPFSTWILFPENSGKPWAGAENLTCWIHDVDFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 SCSWAVGPGAPADVQYDLYLNVANRRQQYECLHYKTDAQGTRIGCRFDDISRLSSGSQSS
::::::::::::::::::::::: .:::::::::::::::::::::::::::::::::::
XP_016 SCSWAVGPGAPADVQYDLYLNVA-KRQQYECLHYKTDAQGTRIGCRFDDISRLSSGSQSS
130 140 150 160 170
190 200 210 220 230 240
pF1KB5 HILVRGRSAAFGIPCTDKFVVFSQIEILTPPNMTAKCNKTHSFMHWKMRSHFNRKFRYEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HILVRGRSAAFGIPCTDKFVVFSQIEILTPPNMTAKCNKTHSFMHWKMRSHFNRKFRYEL
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB5 QIQKRMQPVITEQVRDRTSFQLLNPGTYTVQIRARERVYEFLSAWSTPQRFECDQEEGAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QIQKRMQPVITEQVRDRTSFQLLNPGTYTVQIRARERVYEFLSAWSTPQRFECDQEEGAN
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB5 TRAWRTSLLIALGTLLALVCVFVICRRYLVMQRLFPRIPHMKDPIGDSFQNDKLVVWEAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TRAWRTSLLIALGTLLALVCVFVICRRYLVMQRLFPRIPHMKDPIGDSFQNDKLVVWEAG
300 310 320 330 340 350
370
pF1KB5 KAGLEECLVTEVQVVQKT
::::::::::::::::::
XP_016 KAGLEECLVTEVQVVQKT
360 370
>>XP_005274489 (OMIM: 308385,430000) PREDICTED: interleu (377 aa)
initn: 1590 init1: 1590 opt: 2584 Z-score: 3199.3 bits: 600.7 E(85289): 1.8e-171
Smith-Waterman score: 2584; 99.5% identity (99.7% similar) in 378 aa overlap (1-378:1-377)
10 20 30 40 50 60
pF1KB5 MVLLWLTLLLIALPCLLQTKEDPNPPITNLRMKAKAQQLTWDLNRNVTDIECVKDADYSM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MVLLWLTLLLIALPCLLQTKEDPNPPITNLRMKAKAQQLTWDLNRNVTDIECVKDADYSM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 PAVNNSYCQFGAISLCEVTNYTVRVANPPFSTWILFPENSGKPWAGAENLTCWIHDVDFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PAVNNSYCQFGAISLCEVTNYTVRVANPPFSTWILFPENSGKPWAGAENLTCWIHDVDFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 SCSWAVGPGAPADVQYDLYLNVANRRQQYECLHYKTDAQGTRIGCRFDDISRLSSGSQSS
::::::::::::::::::::::: .:::::::::::::::::::::::::::::::::::
XP_005 SCSWAVGPGAPADVQYDLYLNVA-KRQQYECLHYKTDAQGTRIGCRFDDISRLSSGSQSS
130 140 150 160 170
190 200 210 220 230 240
pF1KB5 HILVRGRSAAFGIPCTDKFVVFSQIEILTPPNMTAKCNKTHSFMHWKMRSHFNRKFRYEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HILVRGRSAAFGIPCTDKFVVFSQIEILTPPNMTAKCNKTHSFMHWKMRSHFNRKFRYEL
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB5 QIQKRMQPVITEQVRDRTSFQLLNPGTYTVQIRARERVYEFLSAWSTPQRFECDQEEGAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QIQKRMQPVITEQVRDRTSFQLLNPGTYTVQIRARERVYEFLSAWSTPQRFECDQEEGAN
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB5 TRAWRTSLLIALGTLLALVCVFVICRRYLVMQRLFPRIPHMKDPIGDSFQNDKLVVWEAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TRAWRTSLLIALGTLLALVCVFVICRRYLVMQRLFPRIPHMKDPIGDSFQNDKLVVWEAG
300 310 320 330 340 350
370
pF1KB5 KAGLEECLVTEVQVVQKT
::::::::::::::::::
XP_005 KAGLEECLVTEVQVVQKT
360 370
>>XP_016885532 (OMIM: 308385,430000) PREDICTED: interleu (377 aa)
initn: 1590 init1: 1590 opt: 2584 Z-score: 3199.3 bits: 600.7 E(85289): 1.8e-171
Smith-Waterman score: 2584; 99.5% identity (99.7% similar) in 378 aa overlap (1-378:1-377)
10 20 30 40 50 60
pF1KB5 MVLLWLTLLLIALPCLLQTKEDPNPPITNLRMKAKAQQLTWDLNRNVTDIECVKDADYSM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MVLLWLTLLLIALPCLLQTKEDPNPPITNLRMKAKAQQLTWDLNRNVTDIECVKDADYSM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 PAVNNSYCQFGAISLCEVTNYTVRVANPPFSTWILFPENSGKPWAGAENLTCWIHDVDFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PAVNNSYCQFGAISLCEVTNYTVRVANPPFSTWILFPENSGKPWAGAENLTCWIHDVDFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 SCSWAVGPGAPADVQYDLYLNVANRRQQYECLHYKTDAQGTRIGCRFDDISRLSSGSQSS
::::::::::::::::::::::: .:::::::::::::::::::::::::::::::::::
XP_016 SCSWAVGPGAPADVQYDLYLNVA-KRQQYECLHYKTDAQGTRIGCRFDDISRLSSGSQSS
130 140 150 160 170
190 200 210 220 230 240
pF1KB5 HILVRGRSAAFGIPCTDKFVVFSQIEILTPPNMTAKCNKTHSFMHWKMRSHFNRKFRYEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HILVRGRSAAFGIPCTDKFVVFSQIEILTPPNMTAKCNKTHSFMHWKMRSHFNRKFRYEL
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB5 QIQKRMQPVITEQVRDRTSFQLLNPGTYTVQIRARERVYEFLSAWSTPQRFECDQEEGAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QIQKRMQPVITEQVRDRTSFQLLNPGTYTVQIRARERVYEFLSAWSTPQRFECDQEEGAN
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB5 TRAWRTSLLIALGTLLALVCVFVICRRYLVMQRLFPRIPHMKDPIGDSFQNDKLVVWEAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TRAWRTSLLIALGTLLALVCVFVICRRYLVMQRLFPRIPHMKDPIGDSFQNDKLVVWEAG
300 310 320 330 340 350
370
pF1KB5 KAGLEECLVTEVQVVQKT
::::::::::::::::::
XP_016 KAGLEECLVTEVQVVQKT
360 370
>>XP_005274838 (OMIM: 308385,430000) PREDICTED: interleu (377 aa)
initn: 1590 init1: 1590 opt: 2584 Z-score: 3199.3 bits: 600.7 E(85289): 1.8e-171
Smith-Waterman score: 2584; 99.5% identity (99.7% similar) in 378 aa overlap (1-378:1-377)
10 20 30 40 50 60
pF1KB5 MVLLWLTLLLIALPCLLQTKEDPNPPITNLRMKAKAQQLTWDLNRNVTDIECVKDADYSM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MVLLWLTLLLIALPCLLQTKEDPNPPITNLRMKAKAQQLTWDLNRNVTDIECVKDADYSM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 PAVNNSYCQFGAISLCEVTNYTVRVANPPFSTWILFPENSGKPWAGAENLTCWIHDVDFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PAVNNSYCQFGAISLCEVTNYTVRVANPPFSTWILFPENSGKPWAGAENLTCWIHDVDFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 SCSWAVGPGAPADVQYDLYLNVANRRQQYECLHYKTDAQGTRIGCRFDDISRLSSGSQSS
::::::::::::::::::::::: .:::::::::::::::::::::::::::::::::::
XP_005 SCSWAVGPGAPADVQYDLYLNVA-KRQQYECLHYKTDAQGTRIGCRFDDISRLSSGSQSS
130 140 150 160 170
190 200 210 220 230 240
pF1KB5 HILVRGRSAAFGIPCTDKFVVFSQIEILTPPNMTAKCNKTHSFMHWKMRSHFNRKFRYEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HILVRGRSAAFGIPCTDKFVVFSQIEILTPPNMTAKCNKTHSFMHWKMRSHFNRKFRYEL
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB5 QIQKRMQPVITEQVRDRTSFQLLNPGTYTVQIRARERVYEFLSAWSTPQRFECDQEEGAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QIQKRMQPVITEQVRDRTSFQLLNPGTYTVQIRARERVYEFLSAWSTPQRFECDQEEGAN
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB5 TRAWRTSLLIALGTLLALVCVFVICRRYLVMQRLFPRIPHMKDPIGDSFQNDKLVVWEAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TRAWRTSLLIALGTLLALVCVFVICRRYLVMQRLFPRIPHMKDPIGDSFQNDKLVVWEAG
300 310 320 330 340 350
370
pF1KB5 KAGLEECLVTEVQVVQKT
::::::::::::::::::
XP_005 KAGLEECLVTEVQVVQKT
360 370
>>NP_001254642 (OMIM: 308385,430000) interleukin-3 recep (300 aa)
initn: 1924 init1: 1924 opt: 1926 Z-score: 2386.5 bits: 450.0 E(85289): 3.4e-126
Smith-Waterman score: 1926; 97.9% identity (99.3% similar) in 285 aa overlap (94-378:16-300)
70 80 90 100 110 120
pF1KB5 NNSYCQFGAISLCEVTNYTVRVANPPFSTWILFPENSGKPWAGAENLTCWIHDVDFLSCS
.: ...:::::::::::::::::::::::
NP_001 MVLLWLTLLLIALPCLLQTKEGGKPWAGAENLTCWIHDVDFLSCS
10 20 30 40
130 140 150 160 170 180
pF1KB5 WAVGPGAPADVQYDLYLNVANRRQQYECLHYKTDAQGTRIGCRFDDISRLSSGSQSSHIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WAVGPGAPADVQYDLYLNVANRRQQYECLHYKTDAQGTRIGCRFDDISRLSSGSQSSHIL
50 60 70 80 90 100
190 200 210 220 230 240
pF1KB5 VRGRSAAFGIPCTDKFVVFSQIEILTPPNMTAKCNKTHSFMHWKMRSHFNRKFRYELQIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VRGRSAAFGIPCTDKFVVFSQIEILTPPNMTAKCNKTHSFMHWKMRSHFNRKFRYELQIQ
110 120 130 140 150 160
250 260 270 280 290 300
pF1KB5 KRMQPVITEQVRDRTSFQLLNPGTYTVQIRARERVYEFLSAWSTPQRFECDQEEGANTRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRMQPVITEQVRDRTSFQLLNPGTYTVQIRARERVYEFLSAWSTPQRFECDQEEGANTRA
170 180 190 200 210 220
310 320 330 340 350 360
pF1KB5 WRTSLLIALGTLLALVCVFVICRRYLVMQRLFPRIPHMKDPIGDSFQNDKLVVWEAGKAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WRTSLLIALGTLLALVCVFVICRRYLVMQRLFPRIPHMKDPIGDSFQNDKLVVWEAGKAG
230 240 250 260 270 280
370
pF1KB5 LEECLVTEVQVVQKT
:::::::::::::::
NP_001 LEECLVTEVQVVQKT
290 300
>>NP_006131 (OMIM: 306250,425000) granulocyte-macrophage (400 aa)
initn: 506 init1: 210 opt: 590 Z-score: 731.7 bits: 144.2 E(85289): 5.1e-34
Smith-Waterman score: 643; 31.9% identity (63.0% similar) in 408 aa overlap (1-372:1-399)
10 20 30 40 50
pF1KB5 MVLLWLTLLLIALP----CLLQTKED--PNPPIT--NLRMKAKAQQLTWDLNRNVTDIEC
:.:: .::: :: :. : : : . :.:. .....:.:: ..:.: .:
NP_006 MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKC
10 20 30 40 50 60
60 70 80 90 100
pF1KB5 V---KDADYSMPAVNNSYCQ--FGAISLCEVTNYTVRVANPP--FSTWILFPENSGKPWA
: : ..:. :. : : : : ... :.: . :. .:.: :::. .
NP_006 FLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYP-NSGREGT
70 80 90 100 110
110 120 130 140 150 160
pF1KB5 GAENLTCWIHDVDFLSCSWAVGPGAPADVQYDLYLNVANRRQQYECLHYKTDAQGTRIGC
.:.:..:.:...:...:.:: :: :: :::: ::. ..::.. .: .: :. ::..::
NP_006 AAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDS-GTHVGC
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB5 RFDDISRLSSGSQSSHILVRGRSAAFGIPCTDKFVVFSQIEILTPP-NMTAKCNKTHSFM
..:..: :.: ...:: : : .:: :... ..:: ..:: :.:..:: :: ..
NP_006 HLDNLSGLTS---RNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLV
180 190 200 210 220 230
230 240 250 260 270
pF1KB5 HWKMRSHFNR----KFRYELQIQKR-MQP-------VITEQVRDRTSFQLLNP-GTYTVQ
.::. ... :.:.:..... :: .. ....: .: .: . ..:.
NP_006 RWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVK
240 250 260 270 280 290
280 290 300 310 320 330
pF1KB5 IRARE-RVYEFLSAWSTPQRFECDQEEGANTRAWRTSLLIALGTLLALVCVFVICRRYLV
::: . :. .. :.:: .: : .: : . .:. .:::. . . . .:.:
NP_006 IRAADVRILNW-SSWSEAIEFGSD--DG-NLGSVYIYVLLIVGTLVCGIVLGFLFKRFLR
300 310 320 330 340 350
340 350 360 370
pF1KB5 MQRLFPRIPHMKDPIGDSFQNDKLVVWEA-----GKAGLEECL-VTEVQVVQKT
.::::: .:..:: ..:. . . ..:: ::. :: : : :.
NP_006 IQRLFPPVPQIKDKLNDNHEVEDEIIWEEFTPEEGKGYREEVLTVKEIT
360 370 380 390 400
>>NP_001155001 (OMIM: 306250,425000) granulocyte-macroph (400 aa)
initn: 506 init1: 210 opt: 590 Z-score: 731.7 bits: 144.2 E(85289): 5.1e-34
Smith-Waterman score: 643; 31.9% identity (63.0% similar) in 408 aa overlap (1-372:1-399)
10 20 30 40 50
pF1KB5 MVLLWLTLLLIALP----CLLQTKED--PNPPIT--NLRMKAKAQQLTWDLNRNVTDIEC
:.:: .::: :: :. : : : . :.:. .....:.:: ..:.: .:
NP_001 MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKC
10 20 30 40 50 60
60 70 80 90 100
pF1KB5 V---KDADYSMPAVNNSYCQ--FGAISLCEVTNYTVRVANPP--FSTWILFPENSGKPWA
: : ..:. :. : : : : ... :.: . :. .:.: :::. .
NP_001 FLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYP-NSGREGT
70 80 90 100 110
110 120 130 140 150 160
pF1KB5 GAENLTCWIHDVDFLSCSWAVGPGAPADVQYDLYLNVANRRQQYECLHYKTDAQGTRIGC
.:.:..:.:...:...:.:: :: :: :::: ::. ..::.. .: .: :. ::..::
NP_001 AAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDS-GTHVGC
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB5 RFDDISRLSSGSQSSHILVRGRSAAFGIPCTDKFVVFSQIEILTPP-NMTAKCNKTHSFM
..:..: :.: ...:: : : .:: :... ..:: ..:: :.:..:: :: ..
NP_001 HLDNLSGLTS---RNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLV
180 190 200 210 220 230
230 240 250 260 270
pF1KB5 HWKMRSHFNR----KFRYELQIQKR-MQP-------VITEQVRDRTSFQLLNP-GTYTVQ
.::. ... :.:.:..... :: .. ....: .: .: . ..:.
NP_001 RWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVK
240 250 260 270 280 290
280 290 300 310 320 330
pF1KB5 IRARE-RVYEFLSAWSTPQRFECDQEEGANTRAWRTSLLIALGTLLALVCVFVICRRYLV
::: . :. .. :.:: .: : .: : . .:. .:::. . . . .:.:
NP_001 IRAADVRILNW-SSWSEAIEFGSD--DG-NLGSVYIYVLLIVGTLVCGIVLGFLFKRFLR
300 310 320 330 340 350
340 350 360 370
pF1KB5 MQRLFPRIPHMKDPIGDSFQNDKLVVWEA-----GKAGLEECL-VTEVQVVQKT
.::::: .:..:: ..:. . . ..:: ::. :: : : :.
NP_001 IQRLFPPVPQIKDKLNDNHEVEDEIIWEEFTPEEGKGYREEVLTVKEIT
360 370 380 390 400
378 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 03:26:10 2016 done: Fri Nov 4 03:26:11 2016
Total Scan time: 7.910 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]