Result of FASTA (omim) for
pF1KB5221
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5221, 332 aa
1>>>pF1KB5221 332 - 332 aa - 332 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.7419+/-0.000456; mu= 19.5693+/- 0.028
mean_var=72.6788+/-15.372, 0's: 0 Z-trim(109.8): 35 B-trim: 589 in 1/52
Lambda= 0.150442
statistics sampled from 17986 (18016) to 17986 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.576), E-opt: 0.2 (0.211), width: 16
Scan time: 6.390
The best scores are: opt bits E(85289)
NP_005557 (OMIM: 150000,612933) L-lactate dehydrog ( 332) 2167 479.9 3.2e-135
NP_001158886 (OMIM: 150000,612933) L-lactate dehyd ( 361) 2167 480.0 3.3e-135
NP_059144 (OMIM: 150150) L-lactate dehydrogenase C ( 332) 1745 388.3 1.2e-107
NP_002292 (OMIM: 150150) L-lactate dehydrogenase C ( 332) 1745 388.3 1.2e-107
NP_002291 (OMIM: 150100,614128) L-lactate dehydrog ( 334) 1720 382.9 5.1e-106
NP_001167568 (OMIM: 150100,614128) L-lactate dehyd ( 334) 1720 382.9 5.1e-106
NP_001302466 (OMIM: 150100,614128) L-lactate dehyd ( 341) 1720 382.9 5.2e-106
NP_001158888 (OMIM: 150000,612933) L-lactate dehyd ( 241) 1561 348.3 9.8e-96
NP_001158887 (OMIM: 150000,612933) L-lactate dehyd ( 274) 1514 338.1 1.3e-92
XP_006719137 (OMIM: 150100,614128) PREDICTED: L-la ( 353) 1514 338.2 1.5e-92
NP_001128711 (OMIM: 150000,612933) L-lactate dehyd ( 274) 1306 293.0 4.9e-79
XP_016873210 (OMIM: 150150) PREDICTED: L-lactate d ( 216) 1191 267.9 1.4e-71
XP_016873211 (OMIM: 150150) PREDICTED: L-lactate d ( 216) 1191 267.9 1.4e-71
XP_016873474 (OMIM: 610985) PREDICTED: ubiquitin-c ( 341) 500 118.1 2.6e-26
NP_001248313 (OMIM: 610985) ubiquitin-conjugating ( 341) 500 118.1 2.6e-26
NP_001248311 (OMIM: 610985) ubiquitin-conjugating ( 449) 500 118.3 3.2e-26
XP_016873475 (OMIM: 610985) PREDICTED: ubiquitin-c ( 249) 497 117.4 3.3e-26
NP_001035787 (OMIM: 610985) ubiquitin-conjugating ( 471) 500 118.3 3.3e-26
NP_001248314 (OMIM: 610985) ubiquitin-conjugating ( 341) 497 117.5 4.2e-26
NP_001248312 (OMIM: 610985) ubiquitin-conjugating ( 357) 497 117.5 4.3e-26
NP_060784 (OMIM: 610985) ubiquitin-conjugating enz ( 379) 497 117.5 4.5e-26
XP_011518503 (OMIM: 610985) PREDICTED: ubiquitin-c ( 248) 381 92.2 1.3e-18
XP_006718318 (OMIM: 610985) PREDICTED: ubiquitin-c ( 248) 381 92.2 1.3e-18
NP_001248315 (OMIM: 610985) ubiquitin-conjugating ( 199) 207 54.3 2.5e-07
NP_001186040 (OMIM: 154200) malate dehydrogenase, ( 352) 197 52.4 1.7e-06
NP_005908 (OMIM: 154200) malate dehydrogenase, cyt ( 334) 187 50.2 7.3e-06
NP_001303303 (OMIM: 154200) malate dehydrogenase, ( 353) 187 50.2 7.6e-06
NP_005909 (OMIM: 154100) malate dehydrogenase, mit ( 338) 185 49.8 1e-05
>>NP_005557 (OMIM: 150000,612933) L-lactate dehydrogenas (332 aa)
initn: 2167 init1: 2167 opt: 2167 Z-score: 2548.8 bits: 479.9 E(85289): 3.2e-135
Smith-Waterman score: 2167; 100.0% identity (100.0% similar) in 332 aa overlap (1-332:1-332)
10 20 30 40 50 60
pF1KB5 MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 EMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 IPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 IPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 HPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 HPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGI
250 260 270 280 290 300
310 320 330
pF1KB5 SDLVKVTLTSEEEARLKKSADTLWGIQKELQF
::::::::::::::::::::::::::::::::
NP_005 SDLVKVTLTSEEEARLKKSADTLWGIQKELQF
310 320 330
>>NP_001158886 (OMIM: 150000,612933) L-lactate dehydroge (361 aa)
initn: 2167 init1: 2167 opt: 2167 Z-score: 2548.3 bits: 480.0 E(85289): 3.3e-135
Smith-Waterman score: 2167; 100.0% identity (100.0% similar) in 332 aa overlap (1-332:30-361)
10 20 30
pF1KB5 MATLKDQLIYNLLKEEQTPQNKITVVGVGAV
:::::::::::::::::::::::::::::::
NP_001 MGEPSGGYTYTQTSIFLFHAKIPFGSKSNMATLKDQLIYNLLKEEQTPQNKITVVGVGAV
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB5 GMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSKL
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB5 VIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPNCKLLIVSNPVDILTYVAWKIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPNCKLLIVSNPVDILTYVAWKIS
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB5 GFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSL
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB5 KTLHPDLGTDKDKEQWKEVHKQVVESAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KTLHPDLGTDKDKEQWKEVHKQVVESAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVH
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB5 PVSTMIKGLYGIKDDVFLSVPCILGQNGISDLVKVTLTSEEEARLKKSADTLWGIQKELQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PVSTMIKGLYGIKDDVFLSVPCILGQNGISDLVKVTLTSEEEARLKKSADTLWGIQKELQ
310 320 330 340 350 360
pF1KB5 F
:
NP_001 F
>>NP_059144 (OMIM: 150150) L-lactate dehydrogenase C cha (332 aa)
initn: 1743 init1: 1723 opt: 1745 Z-score: 2053.8 bits: 388.3 E(85289): 1.2e-107
Smith-Waterman score: 1745; 75.3% identity (94.3% similar) in 332 aa overlap (1-332:1-332)
10 20 30 40 50 60
pF1KB5 MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKG
:.:.:.::: .:...... : :::.::.::::::::::::.:::::::::::: :::::
NP_059 MSTVKEQLIEKLIEDDENSQCKITIVGTGAVGMACAISILLKDLADELALVDVALDKLKG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFI
:::::::::::. : ::.:::::.:.:::..::.::::::::::.:: :::::: :.: :
NP_059 EMMDLQHGSLFFSTSKITSGKDYSVSANSRIVIVTAGARQQEGETRLALVQRNVAIMKSI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 IPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV
:: .:.:::.::.:.::::::::::..:::::.: .:::::::::::::::::.::.:::
NP_059 IPAIVHYSPDCKILVVSNPVDILTYIVWKISGLPVTRVIGSGCNLDSARFRYLIGEKLGV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 HPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYE
:: :::::..:::::::::.:::.:::::.:::: : ::::.:::.::..::::..::::
NP_059 HPTSCHGWIIGEHGDSSVPLWSGVNVAGVALKTLDPKLGTDSDKEHWKNIHKQVIQSAYE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGI
.::::::::::::::: ::. ::.::::::::::::.:::::::...:::.::.::.::.
NP_059 IIKLKGYTSWAIGLSVMDLVGSILKNLRRVHPVSTMVKGLYGIKEELFLSIPCVLGRNGV
250 260 270 280 290 300
310 320 330
pF1KB5 SDLVKVTLTSEEEARLKKSADTLWGIQKELQF
::.::..:.::::: .::::.:::.:::.: :
NP_059 SDVVKINLNSEEEALFKKSAETLWNIQKDLIF
310 320 330
>>NP_002292 (OMIM: 150150) L-lactate dehydrogenase C cha (332 aa)
initn: 1743 init1: 1723 opt: 1745 Z-score: 2053.8 bits: 388.3 E(85289): 1.2e-107
Smith-Waterman score: 1745; 75.3% identity (94.3% similar) in 332 aa overlap (1-332:1-332)
10 20 30 40 50 60
pF1KB5 MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKG
:.:.:.::: .:...... : :::.::.::::::::::::.:::::::::::: :::::
NP_002 MSTVKEQLIEKLIEDDENSQCKITIVGTGAVGMACAISILLKDLADELALVDVALDKLKG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFI
:::::::::::. : ::.:::::.:.:::..::.::::::::::.:: :::::: :.: :
NP_002 EMMDLQHGSLFFSTSKITSGKDYSVSANSRIVIVTAGARQQEGETRLALVQRNVAIMKSI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 IPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV
:: .:.:::.::.:.::::::::::..:::::.: .:::::::::::::::::.::.:::
NP_002 IPAIVHYSPDCKILVVSNPVDILTYIVWKISGLPVTRVIGSGCNLDSARFRYLIGEKLGV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 HPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYE
:: :::::..:::::::::.:::.:::::.:::: : ::::.:::.::..::::..::::
NP_002 HPTSCHGWIIGEHGDSSVPLWSGVNVAGVALKTLDPKLGTDSDKEHWKNIHKQVIQSAYE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGI
.::::::::::::::: ::. ::.::::::::::::.:::::::...:::.::.::.::.
NP_002 IIKLKGYTSWAIGLSVMDLVGSILKNLRRVHPVSTMVKGLYGIKEELFLSIPCVLGRNGV
250 260 270 280 290 300
310 320 330
pF1KB5 SDLVKVTLTSEEEARLKKSADTLWGIQKELQF
::.::..:.::::: .::::.:::.:::.: :
NP_002 SDVVKINLNSEEEALFKKSAETLWNIQKDLIF
310 320 330
>>NP_002291 (OMIM: 150100,614128) L-lactate dehydrogenas (334 aa)
initn: 1712 init1: 1668 opt: 1720 Z-score: 2024.4 bits: 382.9 E(85289): 5.1e-106
Smith-Waterman score: 1720; 75.6% identity (93.7% similar) in 332 aa overlap (1-331:1-332)
10 20 30 40 50
pF1KB5 MATLKDQLIYNLLKEEQT-PQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLK
:::::..:: . .:: : :.::::::::: :::::::::: :.::::::::::.:::::
NP_002 MATLKEKLIAPVAEEEATVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 GEMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKF
:::::::::::::.:::::. :::.::::::.:..:::.:::::::::::::::::.:::
NP_002 GEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 IIPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLG
:::..:::::.: ...:::::::::::.::.::.::.::::::::::::::::::.:.::
NP_002 IIPQIVKYSPDCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLG
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB5 VHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAY
.:: :::::.::::::::: ::::.:::::::. :.:..:::.:.:.::::::.::::::
NP_002 IHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAY
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB5 EVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNG
:::::::::.:::::::::: ::..::: :.::::::.::.:::...::::.::::. :
NP_002 EVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYGIENEVFLSLPCILNARG
250 260 270 280 290 300
300 310 320 330
pF1KB5 ISDLVKVTLTSEEEARLKKSADTLWGIQKELQF
...... : ..: :.::::::::: :::.:.
NP_002 LTSVINQKLKDDEVAQLKKSADTLWDIQKDLKDL
310 320 330
>>NP_001167568 (OMIM: 150100,614128) L-lactate dehydroge (334 aa)
initn: 1712 init1: 1668 opt: 1720 Z-score: 2024.4 bits: 382.9 E(85289): 5.1e-106
Smith-Waterman score: 1720; 75.6% identity (93.7% similar) in 332 aa overlap (1-331:1-332)
10 20 30 40 50
pF1KB5 MATLKDQLIYNLLKEEQT-PQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLK
:::::..:: . .:: : :.::::::::: :::::::::: :.::::::::::.:::::
NP_001 MATLKEKLIAPVAEEEATVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 GEMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKF
:::::::::::::.:::::. :::.::::::.:..:::.:::::::::::::::::.:::
NP_001 GEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 IIPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLG
:::..:::::.: ...:::::::::::.::.::.::.::::::::::::::::::.:.::
NP_001 IIPQIVKYSPDCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLG
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB5 VHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAY
.:: :::::.::::::::: ::::.:::::::. :.:..:::.:.:.::::::.::::::
NP_001 IHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAY
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB5 EVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNG
:::::::::.:::::::::: ::..::: :.::::::.::.:::...::::.::::. :
NP_001 EVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYGIENEVFLSLPCILNARG
250 260 270 280 290 300
300 310 320 330
pF1KB5 ISDLVKVTLTSEEEARLKKSADTLWGIQKELQF
...... : ..: :.::::::::: :::.:.
NP_001 LTSVINQKLKDDEVAQLKKSADTLWDIQKDLKDL
310 320 330
>>NP_001302466 (OMIM: 150100,614128) L-lactate dehydroge (341 aa)
initn: 1712 init1: 1668 opt: 1720 Z-score: 2024.3 bits: 382.9 E(85289): 5.2e-106
Smith-Waterman score: 1720; 75.6% identity (93.7% similar) in 332 aa overlap (1-331:1-332)
10 20 30 40 50
pF1KB5 MATLKDQLIYNLLKEEQT-PQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLK
:::::..:: . .:: : :.::::::::: :::::::::: :.::::::::::.:::::
NP_001 MATLKEKLIAPVAEEEATVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 GEMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKF
:::::::::::::.:::::. :::.::::::.:..:::.:::::::::::::::::.:::
NP_001 GEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 IIPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLG
:::..:::::.: ...:::::::::::.::.::.::.::::::::::::::::::.:.::
NP_001 IIPQIVKYSPDCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLG
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB5 VHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAY
.:: :::::.::::::::: ::::.:::::::. :.:..:::.:.:.::::::.::::::
NP_001 IHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAY
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB5 EVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNG
:::::::::.:::::::::: ::..::: :.::::::.::.:::...::::.::::. :
NP_001 EVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYGIENEVFLSLPCILNARG
250 260 270 280 290 300
300 310 320 330
pF1KB5 ISDLVKVTLTSEEEARLKKSADTLWGIQKELQF
...... : ..: :.::::::::: :::.:.
NP_001 LTSVINQKLKDDEVAQLKKSADTLWDIQKDLKDLXLVSSRL
310 320 330 340
>>NP_001158888 (OMIM: 150000,612933) L-lactate dehydroge (241 aa)
initn: 1561 init1: 1561 opt: 1561 Z-score: 1839.7 bits: 348.3 E(85289): 9.8e-96
Smith-Waterman score: 1561; 98.7% identity (99.6% similar) in 239 aa overlap (1-239:1-239)
10 20 30 40 50 60
pF1KB5 MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 IPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 HPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYE
:::::::::::::::::::::::::::::::::::::::::::::::::::::::: ..
NP_001 HPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVERVFT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGI
NP_001 E
>>NP_001158887 (OMIM: 150000,612933) L-lactate dehydroge (274 aa)
initn: 1514 init1: 1514 opt: 1514 Z-score: 1783.9 bits: 338.1 E(85289): 1.3e-92
Smith-Waterman score: 1514; 100.0% identity (100.0% similar) in 229 aa overlap (1-229:1-229)
10 20 30 40 50 60
pF1KB5 MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 IPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 HPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYE
:::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKECRYTLGDPKGA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGI
NP_001 AILKSSDVISFHCLGYNRILGGGCACCPFYLICD
250 260 270
>>XP_006719137 (OMIM: 150100,614128) PREDICTED: L-lactat (353 aa)
initn: 1506 init1: 1462 opt: 1514 Z-score: 1782.5 bits: 338.2 E(85289): 1.5e-92
Smith-Waterman score: 1514; 79.6% identity (95.0% similar) in 279 aa overlap (1-278:1-279)
10 20 30 40 50
pF1KB5 MATLKDQLIYNLLKEEQT-PQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLK
:::::..:: . .:: : :.::::::::: :::::::::: :.::::::::::.:::::
XP_006 MATLKEKLIAPVAEEEATVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 GEMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKF
:::::::::::::.:::::. :::.::::::.:..:::.:::::::::::::::::.:::
XP_006 GEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 IIPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLG
:::..:::::.: ...:::::::::::.::.::.::.::::::::::::::::::.:.::
XP_006 IIPQIVKYSPDCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLG
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB5 VHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAY
.:: :::::.::::::::: ::::.:::::::. :.:..:::.:.:.::::::.::::::
XP_006 IHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAY
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB5 EVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNG
:::::::::.:::::::::: ::..::: :.::::::.:
XP_006 EVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKVRQTTTKCNMISRIVFYKKIH
250 260 270 280 290 300
300 310 320 330
pF1KB5 ISDLVKVTLTSEEEARLKKSADTLWGIQKELQF
XP_006 LKRLRPDKIIVQGYFCLSKFYVNYSHFPTEVLDSKGRKLRESKTFNRLLSFFI
310 320 330 340 350
332 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 03:28:26 2016 done: Fri Nov 4 03:28:27 2016
Total Scan time: 6.390 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]