Result of FASTA (ccds) for
pF1KB5238
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5238, 207 aa
1>>>pF1KB5238 207 - 207 aa - 207 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7106+/-0.000674; mu= 11.5410+/- 0.041
mean_var=66.8073+/-13.279, 0's: 0 Z-trim(110.6): 35 B-trim: 0 in 0/51
Lambda= 0.156914
statistics sampled from 11664 (11699) to 11664 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.743), E-opt: 0.2 (0.359), width: 16
Scan time: 1.940
The best scores are: opt bits E(32554)
CCDS7358.1 PPIF gene_id:10105|Hs108|chr10 ( 207) 1407 326.7 6.3e-90
CCDS5494.1 PPIA gene_id:5478|Hs108|chr7 ( 165) 893 210.3 5.4e-55
CCDS443.1 PPIE gene_id:10450|Hs108|chr1 ( 301) 847 200.0 1.3e-51
CCDS72898.1 PPIAL4C gene_id:653598|Hs108|chr1 ( 164) 785 185.9 1.2e-47
CCDS41375.2 PPIAL4G gene_id:644591|Hs108|chr1 ( 164) 779 184.5 3.2e-47
CCDS76197.1 PPIAL4A gene_id:653505|Hs108|chr1 ( 164) 778 184.3 3.7e-47
CCDS76201.1 PPIAL4E gene_id:730262|Hs108|chr1 ( 164) 772 182.9 9.5e-47
CCDS76202.1 PPIAL4F gene_id:728945|Hs108|chr1 ( 164) 772 182.9 9.5e-47
CCDS59199.1 PPIAL4D gene_id:645142|Hs108|chr1 ( 164) 769 182.2 1.5e-46
CCDS442.1 PPIE gene_id:10450|Hs108|chr1 ( 296) 769 182.3 2.6e-46
CCDS53299.1 PPIE gene_id:10450|Hs108|chr1 ( 314) 769 182.3 2.7e-46
CCDS2079.1 RANBP2 gene_id:5903|Hs108|chr2 (3224) 770 182.9 1.9e-45
CCDS10191.1 PPIB gene_id:5479|Hs108|chr15 ( 216) 684 163.0 1.2e-40
CCDS3801.1 PPID gene_id:5481|Hs108|chr4 ( 370) 662 158.1 6.2e-39
CCDS469.1 PPIH gene_id:10465|Hs108|chr1 ( 177) 635 151.9 2.2e-37
CCDS75592.1 PPIA gene_id:5478|Hs108|chr7 ( 105) 600 143.9 3.4e-35
CCDS4133.1 PPIC gene_id:5480|Hs108|chr5 ( 212) 599 143.8 7.4e-35
CCDS2235.1 PPIG gene_id:9360|Hs108|chr2 ( 754) 548 132.4 6.9e-31
CCDS2702.1 NKTR gene_id:4820|Hs108|chr3 (1462) 546 132.1 1.7e-30
CCDS81308.1 PPIH gene_id:10465|Hs108|chr1 ( 134) 470 114.5 3e-26
CCDS69169.1 PPIL6 gene_id:285755|Hs108|chr6 ( 279) 457 111.7 4.5e-25
CCDS5074.1 PPIL6 gene_id:285755|Hs108|chr6 ( 311) 457 111.7 4.9e-25
CCDS4826.1 PPIL1 gene_id:51645|Hs108|chr6 ( 166) 414 101.9 2.4e-22
CCDS64162.1 PPWD1 gene_id:23398|Hs108|chr5 ( 490) 399 98.6 6.7e-21
CCDS64161.1 PPWD1 gene_id:23398|Hs108|chr5 ( 616) 399 98.7 8.2e-21
CCDS3985.1 PPWD1 gene_id:23398|Hs108|chr5 ( 646) 399 98.7 8.5e-21
CCDS13793.1 PPIL2 gene_id:23759|Hs108|chr22 ( 520) 373 92.8 4.2e-19
CCDS46670.1 PPIL2 gene_id:23759|Hs108|chr22 ( 527) 373 92.8 4.2e-19
CCDS2333.1 PPIL3 gene_id:53938|Hs108|chr2 ( 161) 361 89.9 9.6e-19
CCDS75252.1 CWC27 gene_id:10283|Hs108|chr5 ( 381) 300 76.2 3e-14
CCDS3982.2 CWC27 gene_id:10283|Hs108|chr5 ( 472) 300 76.2 3.6e-14
CCDS2332.1 PPIL3 gene_id:53938|Hs108|chr2 ( 165) 263 67.7 4.7e-12
CCDS34550.1 PPIL4 gene_id:85313|Hs108|chr6 ( 492) 261 67.4 1.7e-11
>>CCDS7358.1 PPIF gene_id:10105|Hs108|chr10 (207 aa)
initn: 1407 init1: 1407 opt: 1407 Z-score: 1728.0 bits: 326.7 E(32554): 6.3e-90
Smith-Waterman score: 1407; 100.0% identity (100.0% similar) in 207 aa overlap (1-207:1-207)
10 20 30 40 50 60
pF1KB5 MLALRCGSRWLGLLSVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MLALRCGSRWLGLLSVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 RVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 RVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 YGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 YGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDV
130 140 150 160 170 180
190 200
pF1KB5 VKKIESFGSKSGRTSKKIVITDCGQLS
:::::::::::::::::::::::::::
CCDS73 VKKIESFGSKSGRTSKKIVITDCGQLS
190 200
>>CCDS5494.1 PPIA gene_id:5478|Hs108|chr7 (165 aa)
initn: 893 init1: 893 opt: 893 Z-score: 1100.7 bits: 210.3 E(32554): 5.4e-55
Smith-Waterman score: 893; 76.5% identity (91.4% similar) in 162 aa overlap (45-206:3-164)
20 30 40 50 60 70
pF1KB5 SVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLGRVVLELKADVVPKT
:: :..:. ..:.::::: .:: :: ::::
CCDS54 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKT
10 20 30
80 90 100 110 120 130
pF1KB5 AENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKH
::::::: ::::::::::: :::.::.::::.:::: ::::::::::: .: :::: :::
CCDS54 AENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKH
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB5 VGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRT
.:::.::::::::::::::::::: ::.::::::::::.:::::..:. .: :::..:.:
CCDS54 TGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKT
100 110 120 130 140 150
200
pF1KB5 SKKIVITDCGQLS
::::.:.:::::
CCDS54 SKKITIADCGQLE
160
>>CCDS443.1 PPIE gene_id:10450|Hs108|chr1 (301 aa)
initn: 848 init1: 829 opt: 847 Z-score: 1040.3 bits: 200.0 E(32554): 1.3e-51
Smith-Waterman score: 847; 66.1% identity (88.9% similar) in 171 aa overlap (35-205:129-299)
10 20 30 40 50 60
pF1KB5 RCGSRWLGLLSVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLGRVVL
:.: .... .:: ::.:. ..:: ::. .
CCDS44 DDWLKKFSGKTLEENKEEEGSEPPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQM
100 110 120 130 140 150
70 80 90 100 110 120
pF1KB5 ELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSR
:..:::: :::::: ::: :::::.:::.:::.::.::::.::::::::::::::::..
CCDS44 LLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKK
160 170 180 190 200 210
130 140 150 160 170 180
pF1KB5 FPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKI
: :::: :::.:::.:::::.::::::::::. :::::::::::::.: ::.::...:
CCDS44 FDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQI
220 230 240 250 260 270
190 200
pF1KB5 ESFGSKSGRTSKKIVITDCGQLS
:. :::.:. ..:..:.:::.
CCDS44 EAQGSKDGKPKQKVIIADCGEYV
280 290 300
>>CCDS72898.1 PPIAL4C gene_id:653598|Hs108|chr1 (164 aa)
initn: 774 init1: 755 opt: 785 Z-score: 968.6 bits: 185.9 E(32554): 1.2e-47
Smith-Waterman score: 785; 67.3% identity (87.0% similar) in 162 aa overlap (45-206:3-164)
20 30 40 50 60 70
pF1KB5 SVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLGRVVLELKADVVPKT
: .:..:. ..::::::. ..: :: .:::
CCDS72 MVNSVVFFDITVDGKPLGRISIKLFADKIPKT
10 20 30
80 90 100 110 120 130
pF1KB5 AENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKH
::::::: :::::: :::: :::.::.::::.:::: :::: ::::: .: :::. ::
CCDS72 AENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKH
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB5 VGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRT
.: :.::::::::::::::::::: ::.:::::::.::.::: ...:. .: :: ....:
CCDS72 TGSGILSMANAGPNTNGSQFFICTAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKT
100 110 120 130 140 150
200
pF1KB5 SKKIVITDCGQLS
::::.:.::::.
CCDS72 SKKITIADCGQF
160
>>CCDS41375.2 PPIAL4G gene_id:644591|Hs108|chr1 (164 aa)
initn: 769 init1: 750 opt: 779 Z-score: 961.3 bits: 184.5 E(32554): 3.2e-47
Smith-Waterman score: 779; 66.0% identity (87.0% similar) in 162 aa overlap (45-206:3-164)
20 30 40 50 60 70
pF1KB5 SVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLGRVVLELKADVVPKT
: ....:. ..::::::. .. :: .:::
CCDS41 MVNSVIFFDITVDGKPLGRISIKQFADKIPKT
10 20 30
80 90 100 110 120 130
pF1KB5 AENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKH
::::::: :::::: :::: :::.::.::::.::::. :::: ::::: .: :::. ::
CCDS41 AENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTHPNGTGDKSIYGEKFDDENLIRKH
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB5 VGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRT
.: :.::::::::::::::::::: ::.:::::::.::.::: ...:. .: :: ....:
CCDS41 TGSGILSMANAGPNTNGSQFFICTAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKT
100 110 120 130 140 150
200
pF1KB5 SKKIVITDCGQLS
::::.:.::::.
CCDS41 SKKITIADCGQF
160
>>CCDS76197.1 PPIAL4A gene_id:653505|Hs108|chr1 (164 aa)
initn: 767 init1: 748 opt: 778 Z-score: 960.1 bits: 184.3 E(32554): 3.7e-47
Smith-Waterman score: 778; 66.7% identity (87.0% similar) in 162 aa overlap (45-206:3-164)
20 30 40 50 60 70
pF1KB5 SVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLGRVVLELKADVVPKT
: .:..:. ..::::::. ..: :: . ::
CCDS76 MVNSVVFFDITVDGKPLGRISIKLFADKILKT
10 20 30
80 90 100 110 120 130
pF1KB5 AENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKH
::::::: :::::: :::: :::.::.::::.:::: ::::: ::::: .: :::. ::
CCDS76 AENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRHNGTGDKSIYGEKFDDENLIRKH
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB5 VGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRT
.: :.::::::::::::::::::. ::.:::::::.::.::: ...:. .: :: ....:
CCDS76 TGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKT
100 110 120 130 140 150
200
pF1KB5 SKKIVITDCGQLS
::::.:.::::.
CCDS76 SKKITIADCGQF
160
>>CCDS76201.1 PPIAL4E gene_id:730262|Hs108|chr1 (164 aa)
initn: 769 init1: 750 opt: 772 Z-score: 952.7 bits: 182.9 E(32554): 9.5e-47
Smith-Waterman score: 772; 66.0% identity (86.4% similar) in 162 aa overlap (45-206:3-164)
20 30 40 50 60 70
pF1KB5 SVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLGRVVLELKADVVPKT
: .:.... .::::::. ..: :: .:::
CCDS76 MVNSVVFFEITRDGKPLGRISIKLFADKIPKT
10 20 30
80 90 100 110 120 130
pF1KB5 AENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKH
::::::: :::::: :::: :::.::.::::.:::: :::: ::::: .: :::. ::
CCDS76 AENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKH
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB5 VGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRT
.: :.::::::::::::::::::. ::.:::::::.::.::: ...:. .: :: ....:
CCDS76 TGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKT
100 110 120 130 140 150
200
pF1KB5 SKKIVITDCGQLS
::::.:.::::.
CCDS76 SKKITIADCGQF
160
>>CCDS76202.1 PPIAL4F gene_id:728945|Hs108|chr1 (164 aa)
initn: 769 init1: 750 opt: 772 Z-score: 952.7 bits: 182.9 E(32554): 9.5e-47
Smith-Waterman score: 772; 66.0% identity (86.4% similar) in 162 aa overlap (45-206:3-164)
20 30 40 50 60 70
pF1KB5 SVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLGRVVLELKADVVPKT
: .:.... .::::::. ..: :: .:::
CCDS76 MVNSVVFFEITRDGKPLGRISIKLFADKIPKT
10 20 30
80 90 100 110 120 130
pF1KB5 AENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKH
::::::: :::::: :::: :::.::.::::.:::: :::: ::::: .: :::. ::
CCDS76 AENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKH
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB5 VGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRT
.: :.::::::::::::::::::. ::.:::::::.::.::: ...:. .: :: ....:
CCDS76 TGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKT
100 110 120 130 140 150
200
pF1KB5 SKKIVITDCGQLS
::::.:.::::.
CCDS76 SKKITIADCGQF
160
>>CCDS59199.1 PPIAL4D gene_id:645142|Hs108|chr1 (164 aa)
initn: 766 init1: 747 opt: 769 Z-score: 949.1 bits: 182.2 E(32554): 1.5e-46
Smith-Waterman score: 769; 66.0% identity (85.8% similar) in 162 aa overlap (45-206:3-164)
20 30 40 50 60 70
pF1KB5 SVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLGRVVLELKADVVPKT
: .:.... .::::::. ..: :: .:::
CCDS59 MVNSVVFFEITRDGKPLGRISIKLFADKIPKT
10 20 30
80 90 100 110 120 130
pF1KB5 AENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKH
::::::: :::::: :::: :::.::.::::.:::: :::: ::::: .: :::. ::
CCDS59 AENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKH
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB5 VGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRT
.: :.::::::::::::::::::. ::.:::::::.::.::: ...:. : :: ....:
CCDS59 TGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEATEHFGYRNSKT
100 110 120 130 140 150
200
pF1KB5 SKKIVITDCGQLS
::::.:.::::.
CCDS59 SKKITIADCGQF
160
>>CCDS442.1 PPIE gene_id:10450|Hs108|chr1 (296 aa)
initn: 769 init1: 769 opt: 769 Z-score: 944.9 bits: 182.3 E(32554): 2.6e-46
Smith-Waterman score: 769; 68.9% identity (88.7% similar) in 151 aa overlap (35-185:129-279)
10 20 30 40 50 60
pF1KB5 RCGSRWLGLLSVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLGRVVL
:.: .... .:: ::.:. ..:: ::. .
CCDS44 DDWLKKFSGKTLEENKEEEGSEPPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQM
100 110 120 130 140 150
70 80 90 100 110 120
pF1KB5 ELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSR
:..:::: :::::: ::: :::::.:::.:::.::.::::.::::::::::::::::..
CCDS44 LLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKK
160 170 180 190 200 210
130 140 150 160 170 180
pF1KB5 FPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKI
: :::: :::.:::.:::::.::::::::::. :::::::::::::.: ::.::...:
CCDS44 FDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQI
220 230 240 250 260 270
190 200
pF1KB5 ESFGSKSGRTSKKIVITDCGQLS
:
CCDS44 EKQEESAITSQPRSWKLT
280 290
207 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 06:31:49 2016 done: Sat Nov 5 06:31:49 2016
Total Scan time: 1.940 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]