Result of FASTA (omim) for
pF1KB5241
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5241, 478 aa
1>>>pF1KB5241 478 - 478 aa - 478 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0260+/-0.000477; mu= 14.6491+/- 0.029
mean_var=82.4516+/-17.847, 0's: 0 Z-trim(110.5): 63 B-trim: 1722 in 2/52
Lambda= 0.141245
statistics sampled from 18759 (18816) to 18759 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.576), E-opt: 0.2 (0.221), width: 16
Scan time: 8.250
The best scores are: opt bits E(85289)
NP_001539 (OMIM: 147690) interferon-induced protei ( 478) 3153 652.8 6.2e-187
NP_001257856 (OMIM: 147690) interferon-induced pro ( 478) 3147 651.5 1.4e-186
NP_001257857 (OMIM: 147690) interferon-induced pro ( 447) 2932 607.7 2.1e-173
NP_001257858 (OMIM: 147690) interferon-induced pro ( 447) 2932 607.7 2.1e-173
NP_001257859 (OMIM: 147690) interferon-induced pro ( 447) 2932 607.7 2.1e-173
NP_036552 (OMIM: 616135) interferon-induced protei ( 482) 1765 369.9 8.7e-102
NP_001538 (OMIM: 147040) interferon-induced protei ( 472) 1348 284.9 3.2e-76
NP_001026853 (OMIM: 604650) interferon-induced pro ( 490) 740 161.1 6.6e-39
NP_001540 (OMIM: 604650) interferon-induced protei ( 490) 740 161.1 6.6e-39
NP_001276688 (OMIM: 604650) interferon-induced pro ( 438) 633 139.2 2.2e-32
NP_001276687 (OMIM: 604650) interferon-induced pro ( 438) 633 139.2 2.2e-32
NP_055635 (OMIM: 606081) mitochondrial import rece ( 608) 171 45.2 0.00063
>>NP_001539 (OMIM: 147690) interferon-induced protein wi (478 aa)
initn: 3153 init1: 3153 opt: 3153 Z-score: 3477.1 bits: 652.8 E(85289): 6.2e-187
Smith-Waterman score: 3153; 100.0% identity (100.0% similar) in 478 aa overlap (1-478:1-478)
10 20 30 40 50 60
pF1KB5 MSTNGDDHQVKDSLEQLRCHFTWELSIDDDEMPDLENRVLDQIEFLDTKYSVGIHNLLAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSTNGDDHQVKDSLEQLRCHFTWELSIDDDEMPDLENRVLDQIEFLDTKYSVGIHNLLAY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 VKHLKGQNEEALKSLKEAENLMQEEHDNQANVRSLVTWGNFAWMYYHMGRLAEAQTYLDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VKHLKGQNEEALKSLKEAENLMQEEHDNQANVRSLVTWGNFAWMYYHMGRLAEAQTYLDK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 VENICKKLSNPFRYRMECPEIDCEEGWALLKCGGKNYERAKACFEKVLEVDPENPESSAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VENICKKLSNPFRYRMECPEIDCEEGWALLKCGGKNYERAKACFEKVLEVDPENPESSAG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 YAISAYRLDGFKLATKNHKPFSLLPLRQAVRLNPDNGYIKVLLALKLQDEGQEAEGEKYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YAISAYRLDGFKLATKNHKPFSLLPLRQAVRLNPDNGYIKVLLALKLQDEGQEAEGEKYI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 EEALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETPTSVLLHHQIGLCYKAQMI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETPTSVLLHHQIGLCYKAQMI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 QIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVAHLDLARMYIEAGNHRKAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVAHLDLARMYIEAGNHRKAE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 ENFQKLLCMKPVVEETMQDIHFHYGRFQEFQKKSDVNAIIHYLKAIKIEQASLTRDKSIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENFQKLLCMKPVVEETMQDIHFHYGRFQEFQKKSDVNAIIHYLKAIKIEQASLTRDKSIN
370 380 390 400 410 420
430 440 450 460 470
pF1KB5 SLKKLVLRKLRRKALDLESLSLLGFVYKLEGNMNEALEYYERALRLAADFENSVRQGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLKKLVLRKLRRKALDLESLSLLGFVYKLEGNMNEALEYYERALRLAADFENSVRQGP
430 440 450 460 470
>>NP_001257856 (OMIM: 147690) interferon-induced protein (478 aa)
initn: 3147 init1: 3147 opt: 3147 Z-score: 3470.5 bits: 651.5 E(85289): 1.4e-186
Smith-Waterman score: 3147; 99.8% identity (99.8% similar) in 478 aa overlap (1-478:1-478)
10 20 30 40 50 60
pF1KB5 MSTNGDDHQVKDSLEQLRCHFTWELSIDDDEMPDLENRVLDQIEFLDTKYSVGIHNLLAY
: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MCTNGDDHQVKDSLEQLRCHFTWELSIDDDEMPDLENRVLDQIEFLDTKYSVGIHNLLAY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 VKHLKGQNEEALKSLKEAENLMQEEHDNQANVRSLVTWGNFAWMYYHMGRLAEAQTYLDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VKHLKGQNEEALKSLKEAENLMQEEHDNQANVRSLVTWGNFAWMYYHMGRLAEAQTYLDK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 VENICKKLSNPFRYRMECPEIDCEEGWALLKCGGKNYERAKACFEKVLEVDPENPESSAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VENICKKLSNPFRYRMECPEIDCEEGWALLKCGGKNYERAKACFEKVLEVDPENPESSAG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 YAISAYRLDGFKLATKNHKPFSLLPLRQAVRLNPDNGYIKVLLALKLQDEGQEAEGEKYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YAISAYRLDGFKLATKNHKPFSLLPLRQAVRLNPDNGYIKVLLALKLQDEGQEAEGEKYI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 EEALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETPTSVLLHHQIGLCYKAQMI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETPTSVLLHHQIGLCYKAQMI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 QIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVAHLDLARMYIEAGNHRKAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVAHLDLARMYIEAGNHRKAE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 ENFQKLLCMKPVVEETMQDIHFHYGRFQEFQKKSDVNAIIHYLKAIKIEQASLTRDKSIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENFQKLLCMKPVVEETMQDIHFHYGRFQEFQKKSDVNAIIHYLKAIKIEQASLTRDKSIN
370 380 390 400 410 420
430 440 450 460 470
pF1KB5 SLKKLVLRKLRRKALDLESLSLLGFVYKLEGNMNEALEYYERALRLAADFENSVRQGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLKKLVLRKLRRKALDLESLSLLGFVYKLEGNMNEALEYYERALRLAADFENSVRQGP
430 440 450 460 470
>>NP_001257857 (OMIM: 147690) interferon-induced protein (447 aa)
initn: 2932 init1: 2932 opt: 2932 Z-score: 3234.1 bits: 607.7 E(85289): 2.1e-173
Smith-Waterman score: 2932; 100.0% identity (100.0% similar) in 447 aa overlap (32-478:1-447)
10 20 30 40 50 60
pF1KB5 STNGDDHQVKDSLEQLRCHFTWELSIDDDEMPDLENRVLDQIEFLDTKYSVGIHNLLAYV
::::::::::::::::::::::::::::::
NP_001 MPDLENRVLDQIEFLDTKYSVGIHNLLAYV
10 20 30
70 80 90 100 110 120
pF1KB5 KHLKGQNEEALKSLKEAENLMQEEHDNQANVRSLVTWGNFAWMYYHMGRLAEAQTYLDKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KHLKGQNEEALKSLKEAENLMQEEHDNQANVRSLVTWGNFAWMYYHMGRLAEAQTYLDKV
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB5 ENICKKLSNPFRYRMECPEIDCEEGWALLKCGGKNYERAKACFEKVLEVDPENPESSAGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENICKKLSNPFRYRMECPEIDCEEGWALLKCGGKNYERAKACFEKVLEVDPENPESSAGY
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB5 AISAYRLDGFKLATKNHKPFSLLPLRQAVRLNPDNGYIKVLLALKLQDEGQEAEGEKYIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AISAYRLDGFKLATKNHKPFSLLPLRQAVRLNPDNGYIKVLLALKLQDEGQEAEGEKYIE
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB5 EALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETPTSVLLHHQIGLCYKAQMIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETPTSVLLHHQIGLCYKAQMIQ
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB5 IKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVAHLDLARMYIEAGNHRKAEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVAHLDLARMYIEAGNHRKAEE
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB5 NFQKLLCMKPVVEETMQDIHFHYGRFQEFQKKSDVNAIIHYLKAIKIEQASLTRDKSINS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NFQKLLCMKPVVEETMQDIHFHYGRFQEFQKKSDVNAIIHYLKAIKIEQASLTRDKSINS
340 350 360 370 380 390
430 440 450 460 470
pF1KB5 LKKLVLRKLRRKALDLESLSLLGFVYKLEGNMNEALEYYERALRLAADFENSVRQGP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKKLVLRKLRRKALDLESLSLLGFVYKLEGNMNEALEYYERALRLAADFENSVRQGP
400 410 420 430 440
>>NP_001257858 (OMIM: 147690) interferon-induced protein (447 aa)
initn: 2932 init1: 2932 opt: 2932 Z-score: 3234.1 bits: 607.7 E(85289): 2.1e-173
Smith-Waterman score: 2932; 100.0% identity (100.0% similar) in 447 aa overlap (32-478:1-447)
10 20 30 40 50 60
pF1KB5 STNGDDHQVKDSLEQLRCHFTWELSIDDDEMPDLENRVLDQIEFLDTKYSVGIHNLLAYV
::::::::::::::::::::::::::::::
NP_001 MPDLENRVLDQIEFLDTKYSVGIHNLLAYV
10 20 30
70 80 90 100 110 120
pF1KB5 KHLKGQNEEALKSLKEAENLMQEEHDNQANVRSLVTWGNFAWMYYHMGRLAEAQTYLDKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KHLKGQNEEALKSLKEAENLMQEEHDNQANVRSLVTWGNFAWMYYHMGRLAEAQTYLDKV
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB5 ENICKKLSNPFRYRMECPEIDCEEGWALLKCGGKNYERAKACFEKVLEVDPENPESSAGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENICKKLSNPFRYRMECPEIDCEEGWALLKCGGKNYERAKACFEKVLEVDPENPESSAGY
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB5 AISAYRLDGFKLATKNHKPFSLLPLRQAVRLNPDNGYIKVLLALKLQDEGQEAEGEKYIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AISAYRLDGFKLATKNHKPFSLLPLRQAVRLNPDNGYIKVLLALKLQDEGQEAEGEKYIE
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB5 EALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETPTSVLLHHQIGLCYKAQMIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETPTSVLLHHQIGLCYKAQMIQ
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB5 IKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVAHLDLARMYIEAGNHRKAEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVAHLDLARMYIEAGNHRKAEE
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB5 NFQKLLCMKPVVEETMQDIHFHYGRFQEFQKKSDVNAIIHYLKAIKIEQASLTRDKSINS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NFQKLLCMKPVVEETMQDIHFHYGRFQEFQKKSDVNAIIHYLKAIKIEQASLTRDKSINS
340 350 360 370 380 390
430 440 450 460 470
pF1KB5 LKKLVLRKLRRKALDLESLSLLGFVYKLEGNMNEALEYYERALRLAADFENSVRQGP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKKLVLRKLRRKALDLESLSLLGFVYKLEGNMNEALEYYERALRLAADFENSVRQGP
400 410 420 430 440
>>NP_001257859 (OMIM: 147690) interferon-induced protein (447 aa)
initn: 2932 init1: 2932 opt: 2932 Z-score: 3234.1 bits: 607.7 E(85289): 2.1e-173
Smith-Waterman score: 2932; 100.0% identity (100.0% similar) in 447 aa overlap (32-478:1-447)
10 20 30 40 50 60
pF1KB5 STNGDDHQVKDSLEQLRCHFTWELSIDDDEMPDLENRVLDQIEFLDTKYSVGIHNLLAYV
::::::::::::::::::::::::::::::
NP_001 MPDLENRVLDQIEFLDTKYSVGIHNLLAYV
10 20 30
70 80 90 100 110 120
pF1KB5 KHLKGQNEEALKSLKEAENLMQEEHDNQANVRSLVTWGNFAWMYYHMGRLAEAQTYLDKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KHLKGQNEEALKSLKEAENLMQEEHDNQANVRSLVTWGNFAWMYYHMGRLAEAQTYLDKV
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB5 ENICKKLSNPFRYRMECPEIDCEEGWALLKCGGKNYERAKACFEKVLEVDPENPESSAGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENICKKLSNPFRYRMECPEIDCEEGWALLKCGGKNYERAKACFEKVLEVDPENPESSAGY
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB5 AISAYRLDGFKLATKNHKPFSLLPLRQAVRLNPDNGYIKVLLALKLQDEGQEAEGEKYIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AISAYRLDGFKLATKNHKPFSLLPLRQAVRLNPDNGYIKVLLALKLQDEGQEAEGEKYIE
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB5 EALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETPTSVLLHHQIGLCYKAQMIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETPTSVLLHHQIGLCYKAQMIQ
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB5 IKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVAHLDLARMYIEAGNHRKAEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVAHLDLARMYIEAGNHRKAEE
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB5 NFQKLLCMKPVVEETMQDIHFHYGRFQEFQKKSDVNAIIHYLKAIKIEQASLTRDKSINS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NFQKLLCMKPVVEETMQDIHFHYGRFQEFQKKSDVNAIIHYLKAIKIEQASLTRDKSINS
340 350 360 370 380 390
430 440 450 460 470
pF1KB5 LKKLVLRKLRRKALDLESLSLLGFVYKLEGNMNEALEYYERALRLAADFENSVRQGP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKKLVLRKLRRKALDLESLSLLGFVYKLEGNMNEALEYYERALRLAADFENSVRQGP
400 410 420 430 440
>>NP_036552 (OMIM: 616135) interferon-induced protein wi (482 aa)
initn: 1800 init1: 1016 opt: 1765 Z-score: 1948.4 bits: 369.9 E(85289): 8.7e-102
Smith-Waterman score: 1765; 57.3% identity (82.1% similar) in 464 aa overlap (10-473:9-469)
10 20 30 40 50 60
pF1KB5 MSTNGDDHQVKDSLEQLRCHFTWELSIDDDEMPDLENRVLDQIEFLDTKYSVGIHNLLAY
.: : .:.:::::.: .: .. ..:. . .:.::: :: ....:::::
NP_036 MSEIRKDTLKAILLELECHFTWNLLKEDIDLFEVEDTIGQQLEFLTTKSRLALYNLLAY
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 VKHLKGQNEEALKSLKEAENLMQEEHDNQANVRSLVTWGNFAWMYYHMGRLAEAQTYLDK
::::::::..::. :..::...:.::... .:::::::::.::.:::: .: ::: : :
NP_036 VKHLKGQNKDALECLEQAEEIIQQEHSDKEEVRSLVTWGNYAWVYYHMDQLEEAQKYTGK
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB5 VENICKKLSNPFRYRMECPEIDCEEGWALLKCGGKNYERAKACFEKVLEVDPENPESSAG
. :.:::::.: :..:::: :::.:::::: ::: :..::: :::.:::.:.::: . :
NP_036 IGNVCKKLSSPSNYKLECPETDCEKGWALLKFGGKYYQKAKAAFEKALEVEPDNPEFNIG
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB5 YAISAYRLDGFKLATKNHKPFSLLPLRQAVRLNPDNGYIKVLLALKLQDEGQEAEGEKYI
:::..:::: . . : ::: :::.:: :::::.::::.::::::: ::::::::
NP_036 YAITVYRLDD-SDREGSVKSFSLGPLRKAVTLNPDNSYIKVFLALKLQDVHAEAEGEKYI
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB5 EEALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETPTSVLLHHQIGLCYKAQMI
:: : ..::: ::.::::::::::.: .::::::::::. :::: .::::.::::.::::
NP_036 EEILDQISSQPYVLRYAAKFYRRKNSWNKALELLKKALEVTPTSSFLHHQMGLCYRAQMI
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB5 QIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVAHLDLARMYIEAGNHRKAE
:::.::...:.:... :.:..: ::::::..:.:. : :. ::: :: :.:.. .::
NP_036 QIKKATHNRPKGKDKLKVDELISSAIFHFKAAMERDSMFAFAYTDLANMYAEGGQYSNAE
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB5 ENFQKLLCMKPVVEETMQDIHFHYGRFQEFQKKSDVNAIIHYLKAIKIEQASLTRDKSIN
. :.: : .. .... ..::.::::::::..::. .:: :::.:.:... : : : .
NP_036 DIFRKALRLENITDDHKHQIHYHYGRFQEFHRKSENTAIHHYLEALKVKDRSPLRTKLTS
360 370 380 390 400 410
430 440 450 460 470
pF1KB5 SLKKLVLRKLRRKALDLESLSLLGFVYKLEGNMNEALEYYERALRLAADFENSVRQGP
.:::: ..: ..:::..::: :::::::::. .: ::::.: .. : ::.
NP_036 ALKKLSTKRLCHNALDVQSLSALGFVYKLEGEKRQAAEYYEKAQKI--DPENAEFLTALC
420 430 440 450 460 470
NP_036 ELRLSI
480
>>NP_001538 (OMIM: 147040) interferon-induced protein wi (472 aa)
initn: 941 init1: 512 opt: 1348 Z-score: 1489.3 bits: 284.9 E(85289): 3.2e-76
Smith-Waterman score: 1348; 46.5% identity (76.3% similar) in 469 aa overlap (1-464:1-457)
10 20 30 40 50 60
pF1KB5 MSTNGDDHQVKDSLEQLRCHFTWELSIDDDEMPDLENRVLDQIEFLDTKYSVGIHNLLAY
:: : . .....::.::.:::::.: .. . :.:..:. . :: . .... . :::::
NP_001 MSEN-NKNSLESSLRQLKCHFTWNLMEGENSLDDFEDKVFYRTEFQNREFKATMCNLLAY
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 VKHLKGQNEEALKSLKEAENLMQEEHDNQANVRSLVTWGNFAWMYYHMGRLAEAQTYLDK
.:::::::: ::. :..::.:.:.:: .::..::::::::.::.:::::::...: :.::
NP_001 LKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDK
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB5 VENICKKLSNPFRYRMECPEIDCEEGWALLKCGGKNYERAKACFEKVLEVDPENPESSAG
:...:.:.:.: ::.: ::.::::::. :::::.. ::::.::::.:: :.::: ..:
NP_001 VKHVCEKFSSP--YRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSG
120 130 140 150 160 170
190 200 210 220 230
pF1KB5 YAISAYRLDGFKLATKNHKPFSLLPLRQAVRLNPDNGYIKVLLALKLQ---DEGQE-AEG
::..::::.. ..: .. :::::.:::::: :.::::::::. .::.: .::
NP_001 LAIASYRLDNWP-PSQN----AIDPLRQAIRLNPDNQYLKVLLALKLHKMREEGEEEGEG
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 EKYIEEALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETPTSVLLHHQIGLCYK
:: .:::: . . : :.: :::::::: :::.:::::::. :... :: ::: ::.
NP_001 EKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYR
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 AQMIQIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPT-FEVAHLDLARMYIEAGN
:...:. . .. : ..:: ..: :. :...: : . . :.: . :: .. : .
NP_001 AKVFQVMNLRENGMYG--KRKLLELIGHAVAHLKKADEANDNLFRVCSI-LASLHALADQ
300 310 320 330 340
360 370 380 390 400 410
pF1KB5 HRKAEENFQKLLCMKPVVEETMQDIHFHYGRFQEFQKKSDVNAIIHYLKAIKIEQASLTR
.. :: ::: . : .. . : .:..:: :: .: : . .:: :.....::.: : .
NP_001 YEDAEYYFQKEFS-KELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGVKINQKSREK
350 360 370 380 390 400
420 430 440 450 460 470
pF1KB5 DKSINSLKKLVLRKLRRKALDLESLSLLGFVYKLEGNMNEALEYYERALRLAADFENSVR
.: ..:.:.. .: ... : :.: .:.:. .:. .:..: : ::.:
NP_001 EKMKDKLQKIAKMRLSKNGADSEALHVLAFLQELNEKMQQADEDSERGLESGSLIPSASS
410 420 430 440 450 460
pF1KB5 QGP
NP_001 WNGE
470
>>NP_001026853 (OMIM: 604650) interferon-induced protein (490 aa)
initn: 1028 init1: 527 opt: 740 Z-score: 819.5 bits: 161.1 E(85289): 6.6e-39
Smith-Waterman score: 1225; 44.6% identity (73.0% similar) in 471 aa overlap (11-474:6-453)
10 20 30 40 50
pF1KB5 MSTNGDDHQVKDSLE----QLRCHFTWELSIDDDEMPDLENRVLDQIEFLDTKYSVGIHN
:.::: ::.:::::.: .:. :::.:: .:::::.:.... ..:
NP_001 MSEVTKNSLEKILPQLKCHFTWNLFKEDSVSRDLEDRVCNQIEFLNTEFKATMYN
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 LLAYVKHLKGQNEEALKSLKEAENLMQEEHDNQANVRSLVTWGNFAWMYYHMGRLAEAQT
::::.::: :.:: ::. :..::.:.:.:: .::..::::::::.::.:::.:::..::
NP_001 LLAYIKHLDGNNEAALECLRQAEELIQQEHADQAEIRSLVTWGNYAWVYYHLGRLSDAQI
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 YLDKVENICKKLSNPFRYRMECPEIDCEEGWALLKCGGKNYERAKACFEKVLEVDPENPE
:.:::.. :::.::: : .: :.::::::. :::: .: ::::.::::.:: :.:::
NP_001 YVDKVKQTCKKFSNP--YSIEYSELDCEEGWTQLKCG-RN-ERAKVCFEKALEEKPNNPE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 SSAGYAISAYRLDGFKLATKNH--KPFSLLPLRQAVRLNPDNGYIKVLLALKLQDEGQEA
:.: ::. :.:: :: : :: :.::..:.::: :.::::.:::: ..::
NP_001 FSSGLAIAMYHLD-------NHPEKQFSTDVLKQAIELSPDNQYVKVLLGLKLQKMNKEA
180 190 200 210 220
240 250 260 270 280 290
pF1KB5 EGEKYIEEALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETPTSVLLHHQIGLC
:::...:::: . :: :.: :::::::::..:::.::....:. ::.. :.:::: :
NP_001 EGEQFVEEALEKSPCQTDVLRSAAKFYRRKGDLDKAIELFQRVLESTPNNGYLYHQIGCC
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB5 YKAQMIQIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVAHLDLARMYIEAG
:::.. :.... ... : :.: .. . . :. . ..:.:: . :. :::. ..:.
NP_001 YKAKVRQMQNTGESEASG-NKEMIEALKQYAMDYSNKALEKGLNPLNAYSDLAE-FLET-
290 300 310 320 330 340
360 370 380 390 400 410
pF1KB5 NHRKAEENFQKLLCMKPVVEETMQDIHFHYGRFQEFQKKSDVNAIIHYLKAIKIEQASLT
: .: . : : . :. : .: .:... ::. .:. : :....: . :
NP_001 ------ECYQTPFN-KEVPDAEKQQSHQRYCNLQKYNGKSEDTAVQHGLEGLSISKKSTD
350 360 370 380 390
420 430 440 450 460 470
pF1KB5 RDKSINSLKKLVLRKLRRKALDLESLSLLGFVYKLEGNMNEALEYYERAL-RLAADFENS
... .. ... : ..: . :. :...: .:.. .: . ::. : :: : ..
NP_001 KEEIKDQPQNVSENLLPQNAPNYWYLQ--GLIHKQNGDLLQAAKCYEKELGRLLRDAPSG
400 410 420 430 440 450
pF1KB5 VRQGP
.
NP_001 IGSIFLSASELEDGSEEMGQGAVSSSPRELLSNSEQLN
460 470 480 490
>>NP_001540 (OMIM: 604650) interferon-induced protein wi (490 aa)
initn: 1028 init1: 527 opt: 740 Z-score: 819.5 bits: 161.1 E(85289): 6.6e-39
Smith-Waterman score: 1225; 44.6% identity (73.0% similar) in 471 aa overlap (11-474:6-453)
10 20 30 40 50
pF1KB5 MSTNGDDHQVKDSLE----QLRCHFTWELSIDDDEMPDLENRVLDQIEFLDTKYSVGIHN
:.::: ::.:::::.: .:. :::.:: .:::::.:.... ..:
NP_001 MSEVTKNSLEKILPQLKCHFTWNLFKEDSVSRDLEDRVCNQIEFLNTEFKATMYN
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 LLAYVKHLKGQNEEALKSLKEAENLMQEEHDNQANVRSLVTWGNFAWMYYHMGRLAEAQT
::::.::: :.:: ::. :..::.:.:.:: .::..::::::::.::.:::.:::..::
NP_001 LLAYIKHLDGNNEAALECLRQAEELIQQEHADQAEIRSLVTWGNYAWVYYHLGRLSDAQI
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 YLDKVENICKKLSNPFRYRMECPEIDCEEGWALLKCGGKNYERAKACFEKVLEVDPENPE
:.:::.. :::.::: : .: :.::::::. :::: .: ::::.::::.:: :.:::
NP_001 YVDKVKQTCKKFSNP--YSIEYSELDCEEGWTQLKCG-RN-ERAKVCFEKALEEKPNNPE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 SSAGYAISAYRLDGFKLATKNH--KPFSLLPLRQAVRLNPDNGYIKVLLALKLQDEGQEA
:.: ::. :.:: :: : :: :.::..:.::: :.::::.:::: ..::
NP_001 FSSGLAIAMYHLD-------NHPEKQFSTDVLKQAIELSPDNQYVKVLLGLKLQKMNKEA
180 190 200 210 220
240 250 260 270 280 290
pF1KB5 EGEKYIEEALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETPTSVLLHHQIGLC
:::...:::: . :: :.: :::::::::..:::.::....:. ::.. :.:::: :
NP_001 EGEQFVEEALEKSPCQTDVLRSAAKFYRRKGDLDKAIELFQRVLESTPNNGYLYHQIGCC
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB5 YKAQMIQIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVAHLDLARMYIEAG
:::.. :.... ... : :.: .. . . :. . ..:.:: . :. :::. ..:.
NP_001 YKAKVRQMQNTGESEASG-NKEMIEALKQYAMDYSNKALEKGLNPLNAYSDLAE-FLET-
290 300 310 320 330 340
360 370 380 390 400 410
pF1KB5 NHRKAEENFQKLLCMKPVVEETMQDIHFHYGRFQEFQKKSDVNAIIHYLKAIKIEQASLT
: .: . : : . :. : .: .:... ::. .:. : :....: . :
NP_001 ------ECYQTPFN-KEVPDAEKQQSHQRYCNLQKYNGKSEDTAVQHGLEGLSISKKSTD
350 360 370 380 390
420 430 440 450 460 470
pF1KB5 RDKSINSLKKLVLRKLRRKALDLESLSLLGFVYKLEGNMNEALEYYERAL-RLAADFENS
... .. ... : ..: . :. :...: .:.. .: . ::. : :: : ..
NP_001 KEEIKDQPQNVSENLLPQNAPNYWYLQ--GLIHKQNGDLLQAAKCYEKELGRLLRDAPSG
400 410 420 430 440 450
pF1KB5 VRQGP
.
NP_001 IGSIFLSASELEDGSEEMGQGAVSSSPRELLSNSEQLN
460 470 480 490
>>NP_001276688 (OMIM: 604650) interferon-induced protein (438 aa)
initn: 883 init1: 391 opt: 633 Z-score: 702.4 bits: 139.2 E(85289): 2.2e-32
Smith-Waterman score: 1078; 43.9% identity (72.6% similar) in 424 aa overlap (54-474:1-401)
30 40 50 60 70 80
pF1KB5 ELSIDDDEMPDLENRVLDQIEFLDTKYSVGIHNLLAYVKHLKGQNEEALKSLKEAENLMQ
..:::::.::: :.:: ::. :..::.:.:
NP_001 MYNLLAYIKHLDGNNEAALECLRQAEELIQ
10 20 30
90 100 110 120 130 140
pF1KB5 EEHDNQANVRSLVTWGNFAWMYYHMGRLAEAQTYLDKVENICKKLSNPFRYRMECPEIDC
.:: .::..::::::::.::.:::.:::..:: :.:::.. :::.::: : .: :.::
NP_001 QEHADQAEIRSLVTWGNYAWVYYHLGRLSDAQIYVDKVKQTCKKFSNP--YSIEYSELDC
40 50 60 70 80
150 160 170 180 190 200
pF1KB5 EEGWALLKCGGKNYERAKACFEKVLEVDPENPESSAGYAISAYRLDGFKLATKNH--KPF
::::. :::: .: ::::.::::.:: :.::: :.: ::. :.:: :: : :
NP_001 EEGWTQLKCG-RN-ERAKVCFEKALEEKPNNPEFSSGLAIAMYHLD-------NHPEKQF
90 100 110 120 130
210 220 230 240 250 260
pF1KB5 SLLPLRQAVRLNPDNGYIKVLLALKLQDEGQEAEGEKYIEEALANMSSQTYVFRYAAKFY
: :.::..:.::: :.::::.:::: ..:::::...:::: . :: :.: :::::
NP_001 STDVLKQAIELSPDNQYVKVLLGLKLQKMNKEAEGEQFVEEALEKSPCQTDVLRSAAKFY
140 150 160 170 180 190
270 280 290 300 310 320
pF1KB5 RRKGSVDKALELLKKALQETPTSVLLHHQIGLCYKAQMIQIKEATKGQPRGQNREKLDKM
::::..:::.::....:. ::.. :.:::: ::::.. :.... ... : :.: .. .
NP_001 RRKGDLDKAIELFQRVLESTPNNGYLYHQIGCCYKAKVRQMQNTGESEASG-NKEMIEAL
200 210 220 230 240 250
330 340 350 360 370 380
pF1KB5 IRSAIFHFESAVEKKPTFEVAHLDLARMYIEAGNHRKAEENFQKLLCMKPVVEETMQDIH
. :. . ..:.:: . :. :::. ..:. : .: . : : . :. :
NP_001 KQYAMDYSNKALEKGLNPLNAYSDLAE-FLET-------ECYQTPFN-KEVPDAEKQQSH
260 270 280 290 300
390 400 410 420 430 440
pF1KB5 FHYGRFQEFQKKSDVNAIIHYLKAIKIEQASLTRDKSINSLKKLVLRKLRRKALDLESLS
.: .:... ::. .:. : :....: . : ... .. ... : ..: . :.
NP_001 QRYCNLQKYNGKSEDTAVQHGLEGLSISKKSTDKEEIKDQPQNVSENLLPQNAPNYWYLQ
310 320 330 340 350 360
450 460 470
pF1KB5 LLGFVYKLEGNMNEALEYYERAL-RLAADFENSVRQGP
:...: .:.. .: . ::. : :: : ...
NP_001 --GLIHKQNGDLLQAAKCYEKELGRLLRDAPSGIGSIFLSASELEDGSEEMGQGAVSSSP
370 380 390 400 410 420
NP_001 RELLSNSEQLN
430
478 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 06:32:36 2016 done: Sat Nov 5 06:32:38 2016
Total Scan time: 8.250 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]