Result of FASTA (omim) for pF1KB5278
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5278, 375 aa
  1>>>pF1KB5278 375 - 375 aa - 375 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.2401+/-0.000409; mu= 16.2078+/- 0.025
 mean_var=57.4141+/-11.855, 0's: 0 Z-trim(110.7): 178  B-trim: 321 in 1/50
 Lambda= 0.169264
 statistics sampled from 18868 (19090) to 18868 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.594), E-opt: 0.2 (0.224), width:  16
 Scan time:  7.720

The best scores are:                                      opt bits E(85289)
XP_016857602 (OMIM: 606494) PREDICTED: CMP-N-acety ( 375) 2495 617.8 1.2e-176
NP_006270 (OMIM: 606494) CMP-N-acetylneuraminate-b ( 375) 2495 617.8 1.2e-176
XP_006710888 (OMIM: 606494) PREDICTED: CMP-N-acety ( 434) 2316 574.1  2e-163
NP_777624 (OMIM: 606494) CMP-N-acetylneuraminate-b ( 390) 2228 552.6 5.5e-157
NP_777629 (OMIM: 606494) CMP-N-acetylneuraminate-b ( 359) 2136 530.1 2.9e-150
XP_011540279 (OMIM: 606494) PREDICTED: CMP-N-acety ( 449) 2049 508.9 8.9e-144
NP_777631 (OMIM: 606494) CMP-N-acetylneuraminate-b ( 413) 2043 507.5 2.3e-143
NP_777628 (OMIM: 606494) CMP-N-acetylneuraminate-b ( 429) 2043 507.5 2.4e-143
NP_777623 (OMIM: 606494) CMP-N-acetylneuraminate-b ( 444) 2043 507.5 2.4e-143
XP_006710890 (OMIM: 606494) PREDICTED: CMP-N-acety ( 418) 1957 486.5 4.9e-137
XP_011540282 (OMIM: 606494) PREDICTED: CMP-N-acety ( 379) 1865 464.0 2.6e-130
XP_016857600 (OMIM: 606494) PREDICTED: CMP-N-acety ( 392) 1864 463.7 3.1e-130
XP_016857601 (OMIM: 606494) PREDICTED: CMP-N-acety ( 392) 1864 463.7 3.1e-130
XP_011540278 (OMIM: 606494) PREDICTED: CMP-N-acety ( 472) 1864 463.8 3.7e-130
XP_011540276 (OMIM: 606494) PREDICTED: CMP-N-acety ( 488) 1864 463.8 3.8e-130
XP_011540275 (OMIM: 606494) PREDICTED: CMP-N-acety ( 502) 1864 463.8 3.9e-130
XP_016857598 (OMIM: 606494) PREDICTED: CMP-N-acety ( 503) 1864 463.8 3.9e-130
XP_016857608 (OMIM: 606494) PREDICTED: CMP-N-acety ( 282) 1841 458.1 1.2e-128
NP_001257389 (OMIM: 606494) CMP-N-acetylneuraminat ( 344) 1834 456.4 4.5e-128
XP_016857610 (OMIM: 606494) PREDICTED: CMP-N-acety ( 268) 1790 445.6 6.2e-125
XP_016857609 (OMIM: 606494) PREDICTED: CMP-N-acety ( 268) 1790 445.6 6.2e-125
XP_011540285 (OMIM: 606494) PREDICTED: CMP-N-acety ( 340) 1702 424.2 2.2e-118
XP_016857605 (OMIM: 606494) PREDICTED: CMP-N-acety ( 340) 1702 424.2 2.2e-118
XP_006710891 (OMIM: 606494) PREDICTED: CMP-N-acety ( 341) 1662 414.4  2e-115
XP_016857603 (OMIM: 606494) PREDICTED: CMP-N-acety ( 341) 1662 414.4  2e-115
XP_016857604 (OMIM: 606494) PREDICTED: CMP-N-acety ( 341) 1662 414.4  2e-115
NP_777626 (OMIM: 606494) CMP-N-acetylneuraminate-b ( 277) 1658 413.4 3.2e-115
NP_001257388 (OMIM: 606494) CMP-N-acetylneuraminat ( 345) 1658 413.4 3.9e-115
XP_011540290 (OMIM: 606494) PREDICTED: CMP-N-acety ( 327) 1611 401.9 1.1e-111
XP_011540289 (OMIM: 606494) PREDICTED: CMP-N-acety ( 327) 1611 401.9 1.1e-111
XP_016857607 (OMIM: 606494) PREDICTED: CMP-N-acety ( 292) 1391 348.2 1.4e-95
NP_001257390 (OMIM: 606494) CMP-N-acetylneuraminat ( 261) 1299 325.7 7.5e-89
XP_016857606 (OMIM: 606494) PREDICTED: CMP-N-acety ( 331) 1206 303.0 6.4e-82
XP_011540283 (OMIM: 606494) PREDICTED: CMP-N-acety ( 346) 1206 303.0 6.6e-82
XP_011540288 (OMIM: 606494) PREDICTED: CMP-N-acety ( 331) 1204 302.5 8.9e-82
XP_011540286 (OMIM: 606494) PREDICTED: CMP-N-acety ( 331) 1204 302.5 8.9e-82
XP_011540287 (OMIM: 606494) PREDICTED: CMP-N-acety ( 331) 1204 302.5 8.9e-82
XP_016857599 (OMIM: 606494) PREDICTED: CMP-N-acety ( 456) 1205 302.8   1e-81
NP_001257394 (OMIM: 606494) CMP-N-acetylneuraminat ( 185) 1121 282.2 6.7e-76
NP_001257392 (OMIM: 606494) CMP-N-acetylneuraminat ( 201) 1117 281.2 1.4e-75
NP_001257391 (OMIM: 606494) CMP-N-acetylneuraminat ( 230)  997 251.9 1.1e-66
XP_016857611 (OMIM: 606494) PREDICTED: CMP-N-acety ( 221)  911 230.9 2.2e-60
NP_777627 (OMIM: 606494) CMP-N-acetylneuraminate-b ( 155)  887 225.0 9.1e-59
NP_001257393 (OMIM: 606494) CMP-N-acetylneuraminat ( 186)  870 220.9 1.9e-57
XP_016860689 (OMIM: 604402,609056) PREDICTED: lact ( 390)  789 201.2 3.3e-51
XP_016860690 (OMIM: 604402,609056) PREDICTED: lact ( 390)  789 201.2 3.3e-51
XP_016860688 (OMIM: 604402,609056) PREDICTED: lact ( 390)  789 201.2 3.3e-51
NP_001035902 (OMIM: 604402,609056) lactosylceramid ( 395)  789 201.2 3.3e-51
NP_003887 (OMIM: 604402,609056) lactosylceramide a ( 418)  789 201.2 3.5e-51
XP_016860701 (OMIM: 604402,609056) PREDICTED: lact ( 290)  753 192.4 1.1e-48


>>XP_016857602 (OMIM: 606494) PREDICTED: CMP-N-acetylneu  (375 aa)
 initn: 2495 init1: 2495 opt: 2495  Z-score: 3292.1  bits: 617.8 E(85289): 1.2e-176
Smith-Waterman score: 2495; 100.0% identity (100.0% similar) in 375 aa overlap (1-375:1-375)

               10        20        30        40        50        60
pF1KB5 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSNSVVLSFDSAGQTLGSEYDRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSNSVVLSFDSAGQTLGSEYDRL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 GFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 REFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 REFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 YDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 YIVYKERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YIVYKERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 TLGSVAVTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIKESWTHNIQREKEFLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLGSVAVTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIKESWTHNIQREKEFLR
              310       320       330       340       350       360

              370     
pF1KB5 KLVKARVITDLSSGI
       :::::::::::::::
XP_016 KLVKARVITDLSSGI
              370     

>>NP_006270 (OMIM: 606494) CMP-N-acetylneuraminate-beta-  (375 aa)
 initn: 2495 init1: 2495 opt: 2495  Z-score: 3292.1  bits: 617.8 E(85289): 1.2e-176
Smith-Waterman score: 2495; 100.0% identity (100.0% similar) in 375 aa overlap (1-375:1-375)

               10        20        30        40        50        60
pF1KB5 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSNSVVLSFDSAGQTLGSEYDRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSNSVVLSFDSAGQTLGSEYDRL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 GFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 GFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 REFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 REFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 YDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 YDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 YIVYKERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 YIVYKERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 TLGSVAVTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIKESWTHNIQREKEFLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 TLGSVAVTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIKESWTHNIQREKEFLR
              310       320       330       340       350       360

              370     
pF1KB5 KLVKARVITDLSSGI
       :::::::::::::::
NP_006 KLVKARVITDLSSGI
              370     

>>XP_006710888 (OMIM: 606494) PREDICTED: CMP-N-acetylneu  (434 aa)
 initn: 2316 init1: 2316 opt: 2316  Z-score: 3054.8  bits: 574.1 E(85289): 2e-163
Smith-Waterman score: 2316; 99.1% identity (99.1% similar) in 350 aa overlap (1-350:1-350)

               10        20        30        40        50        60
pF1KB5 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSNSVVLSFDSAGQTLGSEYDRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSNSVVLSFDSAGQTLGSEYDRL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 GFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 REFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 REFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 YDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 YIVYKERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YIVYKERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 TLGSVAVTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIKESWTHNIQREKEFLR
       ::::::::::::::::::::::::::::::::::::::::::::::   :          
XP_006 TLGSVAVTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIKEPRPHVENLNPSELR
              310       320       330       340       350       360

              370                                                  
pF1KB5 KLVKARVITDLSSGI                                             
                                                                   
XP_006 LPHFCFDHQPSTDPSLKPGNLGPVLQQLLCCYIWVMGGCWREPPICADSCFFLDAQYPAR
              370       380       390       400       410       420

>>NP_777624 (OMIM: 606494) CMP-N-acetylneuraminate-beta-  (390 aa)
 initn: 2228 init1: 2228 opt: 2228  Z-score: 2939.4  bits: 552.6 E(85289): 5.5e-157
Smith-Waterman score: 2450; 95.9% identity (96.2% similar) in 390 aa overlap (1-375:1-390)

               10        20        30                       40     
pF1KB5 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDS---------------NSVVLS
       :::::::::::::::::::::::::::::::::::::::               .:::::
NP_777 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSSKYSHSSSPQEKPVADSVVLS
               10        20        30        40        50        60

          50        60        70        80        90       100     
pF1KB5 FDSAGQTLGSEYDRLGFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 FDSAGQTLGSEYDRLGFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKP
               70        80        90       100       110       120

         110       120       130       140       150       160     
pF1KB5 APMFLDDSFRKWARIREFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 APMFLDDSFRKWARIREFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGN
              130       140       150       160       170       180

         170       180       190       200       210       220     
pF1KB5 GGVLANKSLGSRIDDYDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 GGVLANKSLGSRIDDYDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSL
              190       200       210       220       230       240

         230       240       250       260       270       280     
pF1KB5 FVLAGFKWQDFKWLKYIVYKERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 FVLAGFKWQDFKWLKYIVYKERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLI
              250       260       270       280       290       300

         290       300       310       320       330       340     
pF1KB5 GLPFNNGLMGRGNIPTLGSVAVTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 GLPFNNGLMGRGNIPTLGSVAVTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIK
              310       320       330       340       350       360

         350       360       370     
pF1KB5 ESWTHNIQREKEFLRKLVKARVITDLSSGI
       ::::::::::::::::::::::::::::::
NP_777 ESWTHNIQREKEFLRKLVKARVITDLSSGI
              370       380       390

>>NP_777629 (OMIM: 606494) CMP-N-acetylneuraminate-beta-  (359 aa)
 initn: 2136 init1: 2136 opt: 2136  Z-score: 2818.6  bits: 530.1 E(85289): 2.9e-150
Smith-Waterman score: 2352; 95.5% identity (95.7% similar) in 375 aa overlap (1-375:1-359)

               10        20        30        40        50        60
pF1KB5 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSNSVVLSFDSAGQTLGSEYDRL
       :::::::::::::::::::::::::::::::::::::::                .::::
NP_777 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDS----------------KYDRL
               10        20        30                        40    

               70        80        90       100       110       120
pF1KB5 GFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 GFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARI
           50        60        70        80        90       100    

              130       140       150       160       170       180
pF1KB5 REFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 REFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDD
          110       120       130       140       150       160    

              190       200       210       220       230       240
pF1KB5 YDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 YDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLK
          170       180       190       200       210       220    

              250       260       270       280       290       300
pF1KB5 YIVYKERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 YIVYKERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIP
          230       240       250       260       270       280    

              310       320       330       340       350       360
pF1KB5 TLGSVAVTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIKESWTHNIQREKEFLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 TLGSVAVTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIKESWTHNIQREKEFLR
          290       300       310       320       330       340    

              370     
pF1KB5 KLVKARVITDLSSGI
       :::::::::::::::
NP_777 KLVKARVITDLSSGI
          350         

>>XP_011540279 (OMIM: 606494) PREDICTED: CMP-N-acetylneu  (449 aa)
 initn: 2049 init1: 2049 opt: 2049  Z-score: 2702.2  bits: 508.9 E(85289): 8.9e-144
Smith-Waterman score: 2271; 94.8% identity (95.1% similar) in 365 aa overlap (1-350:1-365)

               10        20        30                       40     
pF1KB5 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDS---------------NSVVLS
       :::::::::::::::::::::::::::::::::::::::               .:::::
XP_011 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSSKYSHSSSPQEKPVADSVVLS
               10        20        30        40        50        60

          50        60        70        80        90       100     
pF1KB5 FDSAGQTLGSEYDRLGFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FDSAGQTLGSEYDRLGFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKP
               70        80        90       100       110       120

         110       120       130       140       150       160     
pF1KB5 APMFLDDSFRKWARIREFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 APMFLDDSFRKWARIREFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGN
              130       140       150       160       170       180

         170       180       190       200       210       220     
pF1KB5 GGVLANKSLGSRIDDYDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GGVLANKSLGSRIDDYDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSL
              190       200       210       220       230       240

         230       240       250       260       270       280     
pF1KB5 FVLAGFKWQDFKWLKYIVYKERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FVLAGFKWQDFKWLKYIVYKERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLI
              250       260       270       280       290       300

         290       300       310       320       330       340     
pF1KB5 GLPFNNGLMGRGNIPTLGSVAVTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLPFNNGLMGRGNIPTLGSVAVTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIK
              310       320       330       340       350       360

         350       360       370                                   
pF1KB5 ESWTHNIQREKEFLRKLVKARVITDLSSGI                              
       :   :                                                       
XP_011 EPRPHVENLNPSELRLPHFCFDHQPSTDPSLKPGNLGPVLQQLLCCYIWVMGGCWREPPI
              370       380       390       400       410       420

>>NP_777631 (OMIM: 606494) CMP-N-acetylneuraminate-beta-  (413 aa)
 initn: 2293 init1: 2040 opt: 2043  Z-score: 2694.9  bits: 507.5 E(85289): 2.3e-143
Smith-Waterman score: 2196; 83.2% identity (83.5% similar) in 423 aa overlap (7-375:7-413)

               10        20        30        40        50        60
pF1KB5 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSNSVVLSFDSAGQTLGSEYDRL
             :::::::::::::::::::::::::::::::::                .::::
NP_777 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDS----------------KYDRL
               10        20        30                        40    

               70                                                  
pF1KB5 GFLLNLDSKL--------------------------------------------------
       ::::::::::                                                  
NP_777 GFLLNLDSKLSPRTLCTVVFGLDCILESPGEPKKLLMPASHPLEILKSLSEDTAFALGFL
           50        60        70        80        90       100    

                   80        90       100       110       120      
pF1KB5 ----PAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARIREFVPP
           ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 KLPRPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARIREFVPP
          110       120       130       140       150       160    

        130       140       150       160       170       180      
pF1KB5 FGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDDYDIVVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 FGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDDYDIVVR
          170       180       190       200       210       220    

        190       200       210       220       230       240      
pF1KB5 LNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLKYIVYKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 LNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLKYIVYKE
          230       240       250       260       270       280    

        250       260       270       280       290       300      
pF1KB5 RVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIPTLGSVA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 RVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIPTLGSVA
          290       300       310       320       330       340    

        310       320       330       340       350       360      
pF1KB5 VTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIKESWTHNIQREKEFLRKLVKAR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 VTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIKESWTHNIQREKEFLRKLVKAR
          350       360       370       380       390       400    

        370     
pF1KB5 VITDLSSGI
       :::::::::
NP_777 VITDLSSGI
          410   

>>NP_777628 (OMIM: 606494) CMP-N-acetylneuraminate-beta-  (429 aa)
 initn: 2481 init1: 2040 opt: 2043  Z-score: 2694.6  bits: 507.5 E(85289): 2.4e-143
Smith-Waterman score: 2238; 86.7% identity (86.7% similar) in 407 aa overlap (23-375:23-429)

               10        20        30        40        50        60
pF1KB5 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSNSVVLSFDSAGQTLGSEYDRL
                             ::::::::::::::::::::::::::::::::::::::
NP_777 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSNSVVLSFDSAGQTLGSEYDRL
               10        20        30        40        50        60

               70                                                  
pF1KB5 GFLLNLDSKL--------------------------------------------------
       ::::::::::                                                  
NP_777 GFLLNLDSKLSPRTLCTVVFGLDCILESPGEPKKLLMPASHPLEILKSLSEDTAFALGFL
               70        80        90       100       110       120

                   80        90       100       110       120      
pF1KB5 ----PAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARIREFVPP
           ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 KLPRPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARIREFVPP
              130       140       150       160       170       180

        130       140       150       160       170       180      
pF1KB5 FGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDDYDIVVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 FGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDDYDIVVR
              190       200       210       220       230       240

        190       200       210       220       230       240      
pF1KB5 LNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLKYIVYKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 LNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLKYIVYKE
              250       260       270       280       290       300

        250       260       270       280       290       300      
pF1KB5 RVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIPTLGSVA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 RVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIPTLGSVA
              310       320       330       340       350       360

        310       320       330       340       350       360      
pF1KB5 VTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIKESWTHNIQREKEFLRKLVKAR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 VTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIKESWTHNIQREKEFLRKLVKAR
              370       380       390       400       410       420

        370     
pF1KB5 VITDLSSGI
       :::::::::
NP_777 VITDLSSGI
                

>>NP_777623 (OMIM: 606494) CMP-N-acetylneuraminate-beta-  (444 aa)
 initn: 2290 init1: 2040 opt: 2043  Z-score: 2694.4  bits: 507.5 E(85289): 2.4e-143
Smith-Waterman score: 2110; 85.7% identity (86.2% similar) in 391 aa overlap (39-375:54-444)

       10        20        30        40        50        60        
pF1KB5 NLLLALCLFLVLGFLYYSAWKLHLLQWEEDSNSVVLSFDSAGQTLGSEYDRLGFLLNLDS
                                     ..::::::::::::::::::::::::::::
NP_777 YYSAWKLHLLQWEEDSSKYSHSSSPQEKPVADSVVLSFDSAGQTLGSEYDRLGFLLNLDS
            30        40        50        60        70        80   

       70                                                          
pF1KB5 KL------------------------------------------------------PAEL
       ::                                                      ::::
NP_777 KLSPRTLCTVVFGLDCILESPGEPKKLLMPASHPLEILKSLSEDTAFALGFLKLPRPAEL
            90       100       110       120       130       140   

           80        90       100       110       120       130    
pF1KB5 ATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARIREFVPPFGIKGQDN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 ATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARIREFVPPFGIKGQDN
           150       160       170       180       190       200   

          140       150       160       170       180       190    
pF1KB5 LIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDDYDIVVRLNSAPVKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 LIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDDYDIVVRLNSAPVKG
           210       220       230       240       250       260   

          200       210       220       230       240       250    
pF1KB5 FEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLKYIVYKERVSASDGF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 FEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLKYIVYKERVSASDGF
           270       280       290       300       310       320   

          260       270       280       290       300       310    
pF1KB5 WKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIPTLGSVAVTMALHGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 WKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIPTLGSVAVTMALHGC
           330       340       350       360       370       380   

          320       330       340       350       360       370    
pF1KB5 DEVAVAGFGYDMSTPNAPLHYYETVRMAAIKESWTHNIQREKEFLRKLVKARVITDLSSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 DEVAVAGFGYDMSTPNAPLHYYETVRMAAIKESWTHNIQREKEFLRKLVKARVITDLSSG
           390       400       410       420       430       440   

        
pF1KB5 I
       :
NP_777 I
        

>--
 initn: 266 init1: 264 opt: 264  Z-score: 346.5  bits: 73.0 E(85289): 1.5e-12
Smith-Waterman score: 264; 97.5% identity (100.0% similar) in 40 aa overlap (1-40:1-40)

               10        20        30        40        50        60
pF1KB5 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSNSVVLSFDSAGQTLGSEYDRL
       :::::::::::::::::::::::::::::::::::::::.                    
NP_777 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSSKYSHSSSPQEKPVADSVVLS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 GFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARI
                                                                   
NP_777 FDSAGQTLGSEYDRLGFLLNLDSKLSPRTLCTVVFGLDCILESPGEPKKLLMPASHPLEI
               70        80        90       100       110       120

>>XP_006710890 (OMIM: 606494) PREDICTED: CMP-N-acetylneu  (418 aa)
 initn: 1957 init1: 1957 opt: 1957  Z-score: 2581.3  bits: 486.5 E(85289): 4.9e-137
Smith-Waterman score: 2173; 94.3% identity (94.6% similar) in 350 aa overlap (1-350:1-334)

               10        20        30        40        50        60
pF1KB5 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSNSVVLSFDSAGQTLGSEYDRL
       :::::::::::::::::::::::::::::::::::::::                .::::
XP_006 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDS----------------KYDRL
               10        20        30                        40    

               70        80        90       100       110       120
pF1KB5 GFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARI
           50        60        70        80        90       100    

              130       140       150       160       170       180
pF1KB5 REFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 REFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDD
          110       120       130       140       150       160    

              190       200       210       220       230       240
pF1KB5 YDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLK
          170       180       190       200       210       220    

              250       260       270       280       290       300
pF1KB5 YIVYKERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YIVYKERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIP
          230       240       250       260       270       280    

              310       320       330       340       350       360
pF1KB5 TLGSVAVTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIKESWTHNIQREKEFLR
       ::::::::::::::::::::::::::::::::::::::::::::::   :          
XP_006 TLGSVAVTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIKEPRPHVENLNPSELR
          290       300       310       320       330       340    

              370                                                  
pF1KB5 KLVKARVITDLSSGI                                             
                                                                   
XP_006 LPHFCFDHQPSTDPSLKPGNLGPVLQQLLCCYIWVMGGCWREPPICADSCFFLDAQYPAR
          350       360       370       380       390       400    




375 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 12:23:31 2016 done: Sat Nov  5 12:23:33 2016
 Total Scan time:  7.720 Total Display time:  0.060

Function used was FASTA [36.3.4 Apr, 2011]
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