FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB5300, 417 aa 1>>>pF1KB5300 417 - 417 aa - 417 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2949+/-0.000927; mu= 16.9551+/- 0.055 mean_var=62.3911+/-12.379, 0's: 0 Z-trim(103.6): 20 B-trim: 0 in 0/51 Lambda= 0.162373 statistics sampled from 7489 (7492) to 7489 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.605), E-opt: 0.2 (0.23), width: 16 Scan time: 2.860 The best scores are: opt bits E(32554) CCDS14438.1 PGK1 gene_id:5230|Hs108|chrX ( 417) 2717 645.4 3e-185 CCDS4930.1 PGK2 gene_id:5232|Hs108|chr6 ( 417) 2459 584.9 4.7e-167 >>CCDS14438.1 PGK1 gene_id:5230|Hs108|chrX (417 aa) initn: 2717 init1: 2717 opt: 2717 Z-score: 3439.3 bits: 645.4 E(32554): 3e-185 Smith-Waterman score: 2717; 100.0% identity (100.0% similar) in 417 aa overlap (1-417:1-417) 10 20 30 40 50 60 pF1KB5 MSLSNKLTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 MSLSNKLTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB5 MSHLGRPDGVPMPDKYSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 MSHLGRPDGVPMPDKYSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB5 NLRFHVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 NLRFHVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB5 LPQKAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 LPQKAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGM 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB5 AFTFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 AFTFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB5 ATVASGIPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 ATVASGIPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVV 310 320 330 340 350 360 370 380 390 400 410 pF1KB5 KATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDALSNI ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 KATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDALSNI 370 380 390 400 410 >>CCDS4930.1 PGK2 gene_id:5232|Hs108|chr6 (417 aa) initn: 2521 init1: 2459 opt: 2459 Z-score: 3112.7 bits: 584.9 E(32554): 4.7e-167 Smith-Waterman score: 2459; 87.3% identity (97.8% similar) in 417 aa overlap (1-417:1-417) 10 20 30 40 50 60 pF1KB5 MSLSNKLTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVL ::::.:::::::::.::::.::::::::::.:::::::::::..::::.:::::::.::: CCDS49 MSLSKKLTLDKLDVRGKRVIMRVDFNVPMKKNQITNNQRIKASIPSIKYCLDNGAKAVVL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB5 MSHLGRPDGVPMPDKYSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLE :::::::::::::::::: :::::::::::::::::::::: :::::::::: ::::::: CCDS49 MSHLGRPDGVPMPDKYSLAPVAVELKSLLGKDVLFLKDCVGAEVEKACANPAPGSVILLE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB5 NLRFHVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVN ::::::::::::.: ::.:.:::: ::::::::::::::::::::::::::::::::::: CCDS49 NLRFHVEEEGKGQDPSGKKIKAEPDKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB5 LPQKAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGM ::.::.::::::::.:::::::.: :::::::::::::::::::.::::::::::::::: CCDS49 LPHKASGFLMKKELDYFAKALENPVRPFLAILGGAKVADKIQLIKNMLDKVNEMIIGGGM 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB5 AFTFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQ :.::::::::::::.:::::::::::::.:.::.::::.::.::::::.:::::::..:. CCDS49 AYTFLKVLNNMEIGASLFDEEGAKIVKDIMAKAQKNGVRITFPVDFVTGDKFDENAQVGK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB5 ATVASGIPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVV ::::::: :::::::::::.:..:..:..:. ::::::.:::::.:::.::::::::.: CCDS49 ATVASGISPGWMGLDCGPESNKNHAQVVAQARLIVWNGPLGVFEWDAFAKGTKALMDEIV 310 320 330 340 350 360 370 380 390 400 410 pF1KB5 KATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDALSNI ::::.::::.::::::::::::::::::::::::::::::::::::.::::.::::. CCDS49 KATSKGCITVIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKILPGVEALSNM 370 380 390 400 410 417 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Thu Nov 3 22:27:45 2016 done: Thu Nov 3 22:27:46 2016 Total Scan time: 2.860 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]