Result of FASTA (ccds) for
pF1KB5364
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5364, 395 aa
1>>>pF1KB5364 395 - 395 aa - 395 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1862+/-0.000843; mu= 17.4947+/- 0.051
mean_var=62.5184+/-12.509, 0's: 0 Z-trim(106.2): 16 B-trim: 0 in 0/49
Lambda= 0.162207
statistics sampled from 8823 (8827) to 8823 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.652), E-opt: 0.2 (0.271), width: 16
Scan time: 2.770
The best scores are: opt bits E(32554)
CCDS6006.1 ASAH1 gene_id:427|Hs108|chr8 ( 395) 2682 636.2 1.5e-182
CCDS6005.1 ASAH1 gene_id:427|Hs108|chr8 ( 411) 2507 595.3 3.3e-170
CCDS47813.1 ASAH1 gene_id:427|Hs108|chr8 ( 389) 1987 473.6 1.4e-133
CCDS43239.1 NAAA gene_id:27163|Hs108|chr4 ( 359) 460 116.2 4.7e-26
>>CCDS6006.1 ASAH1 gene_id:427|Hs108|chr8 (395 aa)
initn: 2682 init1: 2682 opt: 2682 Z-score: 3390.8 bits: 636.2 E(32554): 1.5e-182
Smith-Waterman score: 2682; 99.2% identity (100.0% similar) in 395 aa overlap (1-395:1-395)
10 20 30 40 50 60
pF1KB5 MPGRSCVALVLLAAAVSCAVAQHAPPWTEDCRKSTYPPSGPTYRGAVPWYTINLDLPPYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 MPGRSCVALVLLAAAVSCAVAQHAPPWTEDCRKSTYPPSGPTYRGAVPWYTINLDLPPYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 RWHELMLDKAPMLKVIVNSLKNMINTFVPSGKVMQVVDEKLPGLLGNFPGPFEEEMKGIA
:::::::::::.::::::::::::::::::::.:::::::::::::::::::::::::::
CCDS60 RWHELMLDKAPVLKVIVNSLKNMINTFVPSGKIMQVVDEKLPGLLGNFPGPFEEEMKGIA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 AVTDIPLGEIISFNIFYELFTICTSIVAEDKKGHLIHGRNMDFGVFLGWNINNDTWVITE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 AVTDIPLGEIISFNIFYELFTICTSIVAEDKKGHLIHGRNMDFGVFLGWNINNDTWVITE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 QLKPLTVNLDFQRNNKTVFKASSFAGYVGMLTGFKPGLFSLTLNERFSINGGYLGILEWI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 QLKPLTVNLDFQRNNKTVFKASSFAGYVGMLTGFKPGLFSLTLNERFSINGGYLGILEWI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 LGKKDAMWIGFLTRTVLENSTSYEEAKNLLTKTKILAPAYFILGGNQSGEGCVITRDRKE
:::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 LGKKDVMWIGFLTRTVLENSTSYEEAKNLLTKTKILAPAYFILGGNQSGEGCVITRDRKE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 SLDVYELDAKQGRWYVVQTNYDRWKHPFFLDDRRTPAKMCLNRTSQENISFETMYDVLST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 SLDVYELDAKQGRWYVVQTNYDRWKHPFFLDDRRTPAKMCLNRTSQENISFETMYDVLST
310 320 330 340 350 360
370 380 390
pF1KB5 KPVLNKLTVYTTLIDVTKGQFETYLRDCPDPCIGW
:::::::::::::::::::::::::::::::::::
CCDS60 KPVLNKLTVYTTLIDVTKGQFETYLRDCPDPCIGW
370 380 390
>>CCDS6005.1 ASAH1 gene_id:427|Hs108|chr8 (411 aa)
initn: 2507 init1: 2507 opt: 2507 Z-score: 3169.2 bits: 595.3 E(32554): 3.3e-170
Smith-Waterman score: 2507; 99.2% identity (100.0% similar) in 369 aa overlap (27-395:43-411)
10 20 30 40 50
pF1KB5 MPGRSCVALVLLAAAVSCAVAQHAPPWTEDCRKSTYPPSGPTYRGAVPWYTINLDL
::::::::::::::::::::::::::::::
CCDS60 GSHRASYPSLSALFTEASILGFGSFAVKAQWTEDCRKSTYPPSGPTYRGAVPWYTINLDL
20 30 40 50 60 70
60 70 80 90 100 110
pF1KB5 PPYKRWHELMLDKAPMLKVIVNSLKNMINTFVPSGKVMQVVDEKLPGLLGNFPGPFEEEM
:::::::::::::::.::::::::::::::::::::.:::::::::::::::::::::::
CCDS60 PPYKRWHELMLDKAPVLKVIVNSLKNMINTFVPSGKIMQVVDEKLPGLLGNFPGPFEEEM
80 90 100 110 120 130
120 130 140 150 160 170
pF1KB5 KGIAAVTDIPLGEIISFNIFYELFTICTSIVAEDKKGHLIHGRNMDFGVFLGWNINNDTW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 KGIAAVTDIPLGEIISFNIFYELFTICTSIVAEDKKGHLIHGRNMDFGVFLGWNINNDTW
140 150 160 170 180 190
180 190 200 210 220 230
pF1KB5 VITEQLKPLTVNLDFQRNNKTVFKASSFAGYVGMLTGFKPGLFSLTLNERFSINGGYLGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 VITEQLKPLTVNLDFQRNNKTVFKASSFAGYVGMLTGFKPGLFSLTLNERFSINGGYLGI
200 210 220 230 240 250
240 250 260 270 280 290
pF1KB5 LEWILGKKDAMWIGFLTRTVLENSTSYEEAKNLLTKTKILAPAYFILGGNQSGEGCVITR
:::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 LEWILGKKDVMWIGFLTRTVLENSTSYEEAKNLLTKTKILAPAYFILGGNQSGEGCVITR
260 270 280 290 300 310
300 310 320 330 340 350
pF1KB5 DRKESLDVYELDAKQGRWYVVQTNYDRWKHPFFLDDRRTPAKMCLNRTSQENISFETMYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 DRKESLDVYELDAKQGRWYVVQTNYDRWKHPFFLDDRRTPAKMCLNRTSQENISFETMYD
320 330 340 350 360 370
360 370 380 390
pF1KB5 VLSTKPVLNKLTVYTTLIDVTKGQFETYLRDCPDPCIGW
:::::::::::::::::::::::::::::::::::::::
CCDS60 VLSTKPVLNKLTVYTTLIDVTKGQFETYLRDCPDPCIGW
380 390 400 410
>>CCDS47813.1 ASAH1 gene_id:427|Hs108|chr8 (389 aa)
initn: 2311 init1: 1987 opt: 1987 Z-score: 2511.9 bits: 473.6 E(32554): 1.4e-133
Smith-Waterman score: 2240; 89.9% identity (90.4% similar) in 376 aa overlap (27-395:43-389)
10 20 30 40
pF1KB5 MPGRSCVALVLLAAAVSCAVAQHAPPWTEDCRKSTYPPSGPT-------YRGAVPW
:::::::::::::::: :::::::
CCDS47 GSHRASYPSLSALFTEASILGFGSFAVKAQWTEDCRKSTYPPSGPTVFPAVIRYRGAVPW
20 30 40 50 60 70
50 60 70 80 90 100
pF1KB5 YTINLDLPPYKRWHELMLDKAPMLKVIVNSLKNMINTFVPSGKVMQVVDEKLPGLLGNFP
::::::::::::::::::::::. ::::::::
CCDS47 YTINLDLPPYKRWHELMLDKAPV-----------------------------PGLLGNFP
80 90 100
110 120 130 140 150 160
pF1KB5 GPFEEEMKGIAAVTDIPLGEIISFNIFYELFTICTSIVAEDKKGHLIHGRNMDFGVFLGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 GPFEEEMKGIAAVTDIPLGEIISFNIFYELFTICTSIVAEDKKGHLIHGRNMDFGVFLGW
110 120 130 140 150 160
170 180 190 200 210 220
pF1KB5 NINNDTWVITEQLKPLTVNLDFQRNNKTVFKASSFAGYVGMLTGFKPGLFSLTLNERFSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 NINNDTWVITEQLKPLTVNLDFQRNNKTVFKASSFAGYVGMLTGFKPGLFSLTLNERFSI
170 180 190 200 210 220
230 240 250 260 270 280
pF1KB5 NGGYLGILEWILGKKDAMWIGFLTRTVLENSTSYEEAKNLLTKTKILAPAYFILGGNQSG
::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::
CCDS47 NGGYLGILEWILGKKDVMWIGFLTRTVLENSTSYEEAKNLLTKTKILAPAYFILGGNQSG
230 240 250 260 270 280
290 300 310 320 330 340
pF1KB5 EGCVITRDRKESLDVYELDAKQGRWYVVQTNYDRWKHPFFLDDRRTPAKMCLNRTSQENI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 EGCVITRDRKESLDVYELDAKQGRWYVVQTNYDRWKHPFFLDDRRTPAKMCLNRTSQENI
290 300 310 320 330 340
350 360 370 380 390
pF1KB5 SFETMYDVLSTKPVLNKLTVYTTLIDVTKGQFETYLRDCPDPCIGW
::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SFETMYDVLSTKPVLNKLTVYTTLIDVTKGQFETYLRDCPDPCIGW
350 360 370 380
>>CCDS43239.1 NAAA gene_id:27163|Hs108|chr4 (359 aa)
initn: 648 init1: 316 opt: 460 Z-score: 581.2 bits: 116.2 E(32554): 4.7e-26
Smith-Waterman score: 642; 33.9% identity (64.1% similar) in 354 aa overlap (46-387:32-355)
20 30 40 50 60
pF1KB5 VSCAVAQHAPPWTEDCRKSTYPPSGPTYRGAVPWYTINLDLPPYKRW------HELMLDK
:.: ....:: : :: ..: : .
CCDS43 RTADREARPGLPSLLLLLLAGAGLSAASPPAAPRFNVSLDSVPELRWLPVLRHYDLDLVR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 APMLKVIVNSLKNMINTFVPSGKVMQVVDEKLPGLLGNFPGPFEEEMKGIAAVTDIPLGE
: : .:: . . . ..... :::. ... : : :: :..:. .. :..
CCDS43 AAMAQVIGDRVPKWVHVLI--GKVVLELERFL-------PQPFTGEIRGMCDFMNLSLAD
70 80 90 100 110
130 140 150 160 170 180
pF1KB5 IISFNIFYELFTICTSIVAEDKKGHLIHGRNMDFGVFLGWNINNDTWVITEQLKPLTVNL
. :. :: ..::::::.:..::. ::::.:. .: :. :. :::..
CCDS43 CLLVNLAYESSVFCTSIVAQDSRGHIYHGRNLDYP--FG-NV----------LRKLTVDV
120 130 140 150
190 200 210 220 230 240
pF1KB5 DFQRNNKTVFKASSFAGYVGMLTGFKPGLFSLTLNERFSINGGYLGILEWILGKKDAMW-
.: .:.. .: ...: ::::. :: .: :... .:: . :. : . :..
CCDS43 QFLKNGQIAFTGTTFIGYVGLWTGQSPHKFTVSGDER---DKGW-----WWENAIAALFR
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB5 ----IGFLTRTVLENSTSYEEAKNLLTKTKILAPAYFILGGNQSGEGCVITRDRKESLDV
...: :..: .: ..: : . :.:: ..: .:.:.::.. :: ::::.: :.
CCDS43 RHIPVSWLIRATLSESENFEAAVGKLAKTPLIADVYYIVGGTSPREGVVITRNRDGPADI
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB5 YELDAKQGRWYVVQTNYDRWKHPFFLDDRRTPAKMCLNRTSQENISFETMYDVLSTKPVL
. :: .: :. :.::::.:: ::::: : :: :.: :.:.:.....::. ::
CCDS43 WPLDPLNGAWFRVETNYDHWKPAPKEDDRRTSAIKALNATGQANLSLEALFQILSVVPVY
280 290 300 310 320 330
370 380 390
pF1KB5 NKLTVYTTLIDV-TKGQFETYLRDCPDPCIGW
:..:.:::.... . .. : .:.
CCDS43 NNFTIYTTVMSAGSPDKYMTRIRNPSRK
340 350
395 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 12:31:11 2016 done: Sat Nov 5 12:31:11 2016
Total Scan time: 2.770 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]