Result of FASTA (ccds) for
pF1KB5377
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5377, 340 aa
1>>>pF1KB5377 340 - 340 aa - 340 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.9461+/-0.000736; mu= 14.1953+/- 0.044
mean_var=93.8326+/-18.931, 0's: 0 Z-trim(111.5): 58 B-trim: 0 in 0/53
Lambda= 0.132403
statistics sampled from 12357 (12415) to 12357 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.742), E-opt: 0.2 (0.381), width: 16
Scan time: 2.540
The best scores are: opt bits E(32554)
CCDS12312.1 DNAJB1 gene_id:3337|Hs108|chr19 ( 340) 2322 453.3 1.4e-127
CCDS74295.1 DNAJB1 gene_id:3337|Hs108|chr19 ( 240) 1639 322.7 1.9e-88
CCDS684.1 DNAJB4 gene_id:11080|Hs108|chr1 ( 337) 1583 312.1 4.2e-85
CCDS35007.1 DNAJB5 gene_id:25822|Hs108|chr9 ( 348) 1364 270.3 1.7e-72
CCDS47959.1 DNAJB5 gene_id:25822|Hs108|chr9 ( 420) 1364 270.3 2e-72
CCDS47960.2 DNAJB5 gene_id:25822|Hs108|chr9 ( 462) 1364 270.4 2.1e-72
CCDS8227.1 DNAJB13 gene_id:374407|Hs108|chr11 ( 316) 679 139.4 3.8e-33
CCDS45316.1 DNAJA4 gene_id:55466|Hs108|chr15 ( 397) 609 126.1 4.9e-29
CCDS10299.2 DNAJA4 gene_id:55466|Hs108|chr15 ( 426) 609 126.1 5.1e-29
CCDS6533.1 DNAJA1 gene_id:3301|Hs108|chr9 ( 397) 597 123.8 2.4e-28
CCDS45317.1 DNAJA4 gene_id:55466|Hs108|chr15 ( 370) 464 98.4 1e-20
CCDS47755.1 DNAJB6 gene_id:10049|Hs108|chr7 ( 241) 420 89.8 2.4e-18
CCDS5946.1 DNAJB6 gene_id:10049|Hs108|chr7 ( 326) 420 89.9 3.1e-18
CCDS46519.1 DNAJB2 gene_id:3300|Hs108|chr2 ( 277) 395 85.1 7.4e-17
CCDS2439.1 DNAJB2 gene_id:3300|Hs108|chr2 ( 324) 395 85.1 8.4e-17
CCDS10726.1 DNAJA2 gene_id:10294|Hs108|chr16 ( 412) 396 85.4 8.9e-17
CCDS45400.1 DNAJA3 gene_id:9093|Hs108|chr16 ( 453) 378 82.0 1e-15
CCDS10515.1 DNAJA3 gene_id:9093|Hs108|chr16 ( 480) 378 82.0 1.1e-15
CCDS7316.2 DNAJB12 gene_id:54788|Hs108|chr10 ( 409) 354 77.4 2.3e-14
CCDS14008.1 DNAJB7 gene_id:150353|Hs108|chr22 ( 309) 351 76.7 2.7e-14
CCDS3048.1 DNAJB8 gene_id:165721|Hs108|chr3 ( 232) 349 76.3 2.8e-14
CCDS3277.1 DNAJB11 gene_id:51726|Hs108|chr3 ( 358) 343 75.2 8.9e-14
CCDS4214.1 DNAJC18 gene_id:202052|Hs108|chr5 ( 358) 314 69.7 4.1e-12
CCDS5752.1 DNAJB9 gene_id:4189|Hs108|chr7 ( 223) 308 68.4 6.3e-12
CCDS34035.1 DNAJB14 gene_id:79982|Hs108|chr4 ( 379) 303 67.6 1.8e-11
>>CCDS12312.1 DNAJB1 gene_id:3337|Hs108|chr19 (340 aa)
initn: 2322 init1: 2322 opt: 2322 Z-score: 2404.2 bits: 453.3 E(32554): 1.4e-127
Smith-Waterman score: 2322; 100.0% identity (100.0% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KB5 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 REIFDRYGEEGLKGSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 REIFDRYGEEGLKGSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQRN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 GEEGMDIDDPFSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 GEEGMDIDDPFSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 KKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 KKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 DKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 DKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGE
250 260 270 280 290 300
310 320 330 340
pF1KB5 GLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLPI
::::::::::::::::::::::::::::::::::::::::
CCDS12 GLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLPI
310 320 330 340
>>CCDS74295.1 DNAJB1 gene_id:3337|Hs108|chr19 (240 aa)
initn: 1639 init1: 1639 opt: 1639 Z-score: 1701.2 bits: 322.7 E(32554): 1.9e-88
Smith-Waterman score: 1639; 100.0% identity (100.0% similar) in 240 aa overlap (101-340:1-240)
80 90 100 110 120 130
pF1KB5 GLKGSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQRNGEEGMDIDDP
::::::::::::::::::::::::::::::
CCDS74 MFAEFFGGRNPFDTFFGQRNGEEGMDIDDP
10 20 30
140 150 160 170 180 190
pF1KB5 FSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 FSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRL
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB5 NPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 NPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRD
100 110 120 130 140 150
260 270 280 290 300 310
pF1KB5 GSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 GSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEK
160 170 180 190 200 210
320 330 340
pF1KB5 RGDLIIEFEVIFPERIPQTSRTVLEQVLPI
::::::::::::::::::::::::::::::
CCDS74 RGDLIIEFEVIFPERIPQTSRTVLEQVLPI
220 230 240
>>CCDS684.1 DNAJB4 gene_id:11080|Hs108|chr1 (337 aa)
initn: 1168 init1: 1168 opt: 1583 Z-score: 1641.3 bits: 312.1 E(32554): 4.2e-85
Smith-Waterman score: 1583; 66.3% identity (85.2% similar) in 344 aa overlap (1-339:1-335)
10 20 30 40 50 60
pF1KB5 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRK
:::::: ::. .:::::.::.:::.:::..:::::: : :::::::.::::.:::::.:
CCDS68 MGKDYYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 REIFDRYGEEGLKGSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQRN
:::.:..:::::::. .::. : .: .: ::::::::: :: :::: :::. :::.:
CCDS68 REIYDQFGEEGLKGG--AGGTDG--QGGTFRYTFHGDPHATFAAFFGGSNPFEIFFGRRM
70 80 90 100 110
130 140 150 160 170
pF1KB5 G----EEGMDID-DPFSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEI
: : :.:: ::::.: ..:.:. :.:.. :.: :::::: :.::::::::
CCDS68 GGGRDSEEMEIDGDPFSAFGFSMNGYP-----RDRNSVGPSRLKQDPPVIHELRVSLEEI
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 YSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADI
::::::.::::.:::: ::.: :.::::::::.:::::::::::::.:::.: :.:::::
CCDS68 YSGCTKRMKISRKRLNADGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPADI
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 VFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRR
::..::: : ::::::..:: :.::::::::::..::::::::.::. .:...:::::
CCDS68 VFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRNIPMSVNDIVKPGMRR
240 250 260 270 280 290
300 310 320 330 340
pF1KB5 KVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLPI
.. : :::.::.:..::::.::::: ::. : ..:. ::.. ::
CCDS68 RIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLPAS
300 310 320 330
>>CCDS35007.1 DNAJB5 gene_id:25822|Hs108|chr9 (348 aa)
initn: 1307 init1: 901 opt: 1364 Z-score: 1415.1 bits: 270.3 E(32554): 1.7e-72
Smith-Waterman score: 1496; 62.6% identity (81.3% similar) in 353 aa overlap (1-339:1-346)
10 20 30 40 50 60
pF1KB5 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRK
::::::. ::. ::...:::.:::..::.:::::::::.::::::::::::::::::.:
CCDS35 MGKDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKK
10 20 30 40 50 60
70 80 90 100 110
pF1KB5 REIFDRYGEEGLK-GSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQR
: ..:.::::::: :.: ::::.: :: ::::::::: :: :::: :::: ::..
CCDS35 RGLYDQYGEEGLKTGGGTSGGSSG-----SFHYTFHGDPHATFASFFGGSNPFDIFFASS
70 80 90 100 110
120 130 140 150 160
pF1KB5 NGE--------EGMDID---DPFSGFPMGMGGFTNVNFGRSRSAQE--PARKKQDPPVTH
. . ::.: :::..: : ::.... : :. . : :: :::::.:
CCDS35 RSTRPFSGFDPDDMDVDEDEDPFGAF--GRFGFNGLSRGPRRAPEPLYPRRKVQDPPVVH
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB5 DLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQ
.::::::::: : ::.:::...::::::...:.::::: : .:.:::::::::::::::
CCDS35 ELRVSLEEIYHGSTKRMKITRRRLNPDGRTVRTEDKILHIVIKRGWKEGTKITFPKEGDA
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB5 TSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFK
: .::::::::::::::: :.:::..:.: : :::.:::::::::.::.:::.::. .
CCDS35 TPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGRVIPLPCN
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB5 DVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLPI
:::.:: ... :::::.::.: .:::::.::.: ::.:. .: .:.: ::
CCDS35 DVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLPCS
300 310 320 330 340
>>CCDS47959.1 DNAJB5 gene_id:25822|Hs108|chr9 (420 aa)
initn: 1307 init1: 901 opt: 1364 Z-score: 1413.9 bits: 270.3 E(32554): 2e-72
Smith-Waterman score: 1496; 62.6% identity (81.3% similar) in 353 aa overlap (1-339:73-418)
10 20 30
pF1KB5 MGKDYYQTLGLARGASDEEIKRAYRRQALR
::::::. ::. ::...:::.:::..::.
CCDS47 QLEPLKLRAWTLNGFVKFRNKETSAGPVAVMGKDYYKILGIPSGANEDEIKKAYRKMALK
50 60 70 80 90 100
40 50 60 70 80
pF1KB5 YHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLK-GSGPSGGSGGGANGTS
:::::::::.::::::::::::::::::.:: ..:.::::::: :.: ::::.: :
CCDS47 YHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRGLYDQYGEEGLKTGGGTSGGSSG-----S
110 120 130 140 150
90 100 110 120 130
pF1KB5 FSYTFHGDPHAMFAEFFGGRNPFDTFFGQRNGE--------EGMDID---DPFSGFPMGM
: ::::::::: :: :::: :::: ::.. . . ::.: :::..: :
CCDS47 FHYTFHGDPHATFASFFGGSNPFDIFFASSRSTRPFSGFDPDDMDVDEDEDPFGAF--GR
160 170 180 190 200 210
140 150 160 170 180 190
pF1KB5 GGFTNVNFGRSRSAQE--PARKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKS
::.... : :. . : :: :::::.:.::::::::: : ::.:::...::::::..
CCDS47 FGFNGLSRGPRRAPEPLYPRRKVQDPPVVHELRVSLEEIYHGSTKRMKITRRRLNPDGRT
220 230 240 250 260 270
200 210 220 230 240 250
pF1KB5 IRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIY
.:.::::: : .:.::::::::::::::: : .::::::::::::::: :.:::..:.:
CCDS47 VRTEDKILHIVIKRGWKEGTKITFPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLY
280 290 300 310 320 330
260 270 280 290 300 310
pF1KB5 PARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLII
: :::.:::::::::.::.:::.::. .:::.:: ... :::::.::.: .:::::.
CCDS47 SALISLKEALCGCTVNIPTIDGRVIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIV
340 350 360 370 380 390
320 330 340
pF1KB5 EFEVIFPERIPQTSRTVLEQVLPI
::.: ::.:. .: .:.: ::
CCDS47 EFKVRFPDRLTPQTRQILKQHLPCS
400 410 420
>>CCDS47960.2 DNAJB5 gene_id:25822|Hs108|chr9 (462 aa)
initn: 1307 init1: 901 opt: 1364 Z-score: 1413.3 bits: 270.4 E(32554): 2.1e-72
Smith-Waterman score: 1496; 62.6% identity (81.3% similar) in 353 aa overlap (1-339:115-460)
10 20 30
pF1KB5 MGKDYYQTLGLARGASDEEIKRAYRRQALR
::::::. ::. ::...:::.:::..::.
CCDS47 QLEPLKLRAWTLNGFVKFRNKETSAGPVAVMGKDYYKILGIPSGANEDEIKKAYRKMALK
90 100 110 120 130 140
40 50 60 70 80
pF1KB5 YHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLK-GSGPSGGSGGGANGTS
:::::::::.::::::::::::::::::.:: ..:.::::::: :.: ::::.: :
CCDS47 YHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRGLYDQYGEEGLKTGGGTSGGSSG-----S
150 160 170 180 190
90 100 110 120 130
pF1KB5 FSYTFHGDPHAMFAEFFGGRNPFDTFFGQRNGE--------EGMDID---DPFSGFPMGM
: ::::::::: :: :::: :::: ::.. . . ::.: :::..: :
CCDS47 FHYTFHGDPHATFASFFGGSNPFDIFFASSRSTRPFSGFDPDDMDVDEDEDPFGAF--GR
200 210 220 230 240 250
140 150 160 170 180 190
pF1KB5 GGFTNVNFGRSRSAQE--PARKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKS
::.... : :. . : :: :::::.:.::::::::: : ::.:::...::::::..
CCDS47 FGFNGLSRGPRRAPEPLYPRRKVQDPPVVHELRVSLEEIYHGSTKRMKITRRRLNPDGRT
260 270 280 290 300 310
200 210 220 230 240 250
pF1KB5 IRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIY
.:.::::: : .:.::::::::::::::: : .::::::::::::::: :.:::..:.:
CCDS47 VRTEDKILHIVIKRGWKEGTKITFPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLY
320 330 340 350 360 370
260 270 280 290 300 310
pF1KB5 PARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLII
: :::.:::::::::.::.:::.::. .:::.:: ... :::::.::.: .:::::.
CCDS47 SALISLKEALCGCTVNIPTIDGRVIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIV
380 390 400 410 420 430
320 330 340
pF1KB5 EFEVIFPERIPQTSRTVLEQVLPI
::.: ::.:. .: .:.: ::
CCDS47 EFKVRFPDRLTPQTRQILKQHLPCS
440 450 460
>>CCDS8227.1 DNAJB13 gene_id:374407|Hs108|chr11 (316 aa)
initn: 1085 init1: 634 opt: 679 Z-score: 708.5 bits: 139.4 E(32554): 3.8e-33
Smith-Waterman score: 1046; 48.5% identity (72.5% similar) in 338 aa overlap (1-338:1-314)
10 20 30 40 50 60
pF1KB5 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRK
::.:::..::..:.. : .::.:::: ::..:: :..::.. : :..::::::::::: :
CCDS82 MGQDYYSVLGITRNSEDAQIKQAYRRLALKHHPLKSNEPSSAEIFRQIAEAYDVLSDPMK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 REIFDRYGEEGLKGSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQRN
: :.:..:::::::. : :. . . .:.::: :. .: ::::: :::. ::
CCDS82 RGIYDKFGEEGLKGGIPL--EFGSQTPWTTGYVFHGKPEKVFHEFFGGNNPFSEFF----
70 80 90 100 110
130 140 150 160 170 180
pF1KB5 GEEGMDIDDPFSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCT
:: ..: :.:. ::. ::::: : .:: .:::... :::
CCDS82 DAEGSEVDLNFGGLQ-----------GRGV-------KKQDPQVERDLYLSLEDLFFGCT
120 130 140 150
190 200 210 220 230 240
pF1KB5 KKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLK
::.:::.. :: :: : .::::::.:: ::..::.::: ::::: : :::::.:..:
CCDS82 KKIKISRRVLNEDGYSSTIKDKILTIDVKPGWRQGTRITFEKEGDQGPNIIPADIIFIVK
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB5 DKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGE
.: : :.:....... : : .:: :::.: ::: : . . ..:.:.: . .:::::
CCDS82 EKLHPRFRRENDNLFFVNPIPLGKALTCCTVEVRTLDDRLLNIPINDIIHPKYFKKVPGE
220 230 240 250 260 270
310 320 330 340
pF1KB5 GLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLPI
:.:::. : :.:::.: :.. :: :. .. .:.:.:
CCDS82 GMPLPEDPTKKGDLFIFFDIQFPTRLTPQKKQMLRQALLT
280 290 300 310
>>CCDS45316.1 DNAJA4 gene_id:55466|Hs108|chr15 (397 aa)
initn: 657 init1: 248 opt: 609 Z-score: 634.8 bits: 126.1 E(32554): 4.9e-29
Smith-Waterman score: 651; 35.9% identity (61.9% similar) in 357 aa overlap (5-339:7-348)
10 20 30 40 50
pF1KB5 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDP
::. ::. .:: ::::.:::. ::.:::::: . : :::: :..::.:::::
CCDS45 MVKETQYYDILGVKPSASPEEIKKAYRKLALKYHPDKNPDEG--EKFKLISQAYEVLSDP
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 RKREIFDRYGEEGLKGSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQ
.::...:. ::...: ::::. ::: .: .: :::: . .
CCDS45 KKRDVYDQGGEQAIK----EGGSGS----PSFS-----SPMDIFDMFFGGGGRMARERRG
60 70 80 90 100
120 130 140 150 160 170
pF1KB5 RN--GEEGMDIDDPFSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHD--LRVSLEE
.: . .. ..: ..: .. :: . ... . . :. . ... ...
CCDS45 KNVVHQLSVTLEDLYNGVTKKLALQKNVICEKCEGVGGKKGSVEKCPLCKGRGMQIHIQQ
110 120 130 140 150 160
180 190 200 210 220
pF1KB5 IYSGCTKKM-------KISHKRLNP-------DGKSIRNEDKILTIEVKKGWKEGTKITF
: : .... : . .:.:: .: .. : ::. ..:.:: :.: :: :
CCDS45 IGPGMVQQIQTVCIECKGQGERINPKDRCESCSGAKVIREKKIIEVHVEKGMKDGQKILF
170 180 190 200 210 220
230 240 250 260 270 280
pF1KB5 PKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRT
:::: . :.:...:: .: :..:.: : :.:. .:.: ::::: .. :::.:
CCDS45 HGEGDQEPELEPGDVIIVLDQKDHSVFQRRGHDLIMKMKIQLSEALCGFKKTIKTLDNRI
230 240 250 260 270 280
290 300 310 320 330
pF1KB5 IPVVFK--DVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPER--IPQTSRTVLEQ
. .. : .::. : : : ::.:. :.: ..: :::.: :::::. . . ::
CCDS45 LVITSKAGEVIKHGDLRCVRDEGMPIYKAPLEKGILIIQFLVIFPEKHWLSLEKLPQLEA
290 300 310 320 330 340
340
pF1KB5 VLPI
.::
CCDS45 LLPPRQKVRITDDMDQVELKEFCPNEQNWRQHREAYEEDEDGPQAGVQCQTA
350 360 370 380 390
>>CCDS10299.2 DNAJA4 gene_id:55466|Hs108|chr15 (426 aa)
initn: 734 init1: 248 opt: 609 Z-score: 634.4 bits: 126.1 E(32554): 5.1e-29
Smith-Waterman score: 651; 35.9% identity (61.9% similar) in 357 aa overlap (5-339:36-377)
10 20 30
pF1KB5 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPD
::. ::. .:: ::::.:::. ::.::::
CCDS10 SQSWSSGESDGQPKEQTPEKPRHKMVKETQYYDILGVKPSASPEEIKKAYRKLALKYHPD
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB5 KNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGSGPSGGSGGGANGTSFSYTF
:: . : :::: :..::.:::::.::...:. ::...: ::::. :::
CCDS10 KNPDEG--EKFKLISQAYEVLSDPKKRDVYDQGGEQAIK----EGGSGS----PSFS---
70 80 90 100 110
100 110 120 130 140 150
pF1KB5 HGDPHAMFAEFFGGRNPFDTFFGQRN--GEEGMDIDDPFSGFPMGMGGFTNVNFGRSRSA
.: .: :::: . . .: . .. ..: ..: .. :: . ...
CCDS10 --SPMDIFDMFFGGGGRMARERRGKNVVHQLSVTLEDLYNGVTKKLALQKNVICEKCEGV
120 130 140 150 160 170
160 170 180 190
pF1KB5 QEPARKKQDPPVTHD--LRVSLEEIYSGCTKKM-------KISHKRLNP-------DGKS
. . :. . ... ...: : .... : . .:.:: .: .
CCDS10 GGKKGSVEKCPLCKGRGMQIHIQQIGPGMVQQIQTVCIECKGQGERINPKDRCESCSGAK
180 190 200 210 220 230
200 210 220 230 240 250
pF1KB5 IRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIY
. : ::. ..:.:: :.: :: : :::: . :.:...:: .: :..:.: : :.:.
CCDS10 VIREKKIIEVHVEKGMKDGQKILFHGEGDQEPELEPGDVIIVLDQKDHSVFQRRGHDLIM
240 250 260 270 280 290
260 270 280 290 300 310
pF1KB5 PARISLREALCGCTVNVPTLDGRTIPVVFK--DVIRPGMRRKVPGEGLPLPKTPEKRGDL
.:.: ::::: .. :::.: . .. : .::. : : : ::.:. :.: ..: :
CCDS10 KMKIQLSEALCGFKKTIKTLDNRILVITSKAGEVIKHGDLRCVRDEGMPIYKAPLEKGIL
300 310 320 330 340 350
320 330 340
pF1KB5 IIEFEVIFPER--IPQTSRTVLEQVLPI
::.: :::::. . . :: .::
CCDS10 IIQFLVIFPEKHWLSLEKLPQLEALLPPRQKVRITDDMDQVELKEFCPNEQNWRQHREAY
360 370 380 390 400 410
>>CCDS6533.1 DNAJA1 gene_id:3301|Hs108|chr9 (397 aa)
initn: 528 init1: 239 opt: 597 Z-score: 622.4 bits: 123.8 E(32554): 2.4e-28
Smith-Waterman score: 637; 34.7% identity (62.7% similar) in 357 aa overlap (5-339:7-347)
10 20 30 40 50
pF1KB5 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDP
::..::. .:..::.:.:::. ::.:::::: :. ::::.:..::.::::
CCDS65 MVKETTYYDVLGVKPNATQEELKKAYRKLALKYHPDKN--PNEGEKFKQISQAYEVLSDA
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 RKREIFDRYGEEGLKGSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQ
.:::..:. ::...: ::.::: :.: .: :::: . ..
CCDS65 KKRELYDKGGEQAIK----EGGAGGG----------FGSPMDIFDMFFGGGGRMQRERRG
60 70 80 90 100
120 130 140 150 160 170
pF1KB5 RN--GEEGMDIDDPFSGFPMGMGGFTNVNFGR--SRSAQEPARKKQDPPVTHDLRVSLEE
.: . .. ..: ..: .. :: . .:.... : . ... ...
CCDS65 KNVVHQLSVTLEDLYNGATRKLALQKNVICDKCEGRGGKKGAVECCPNCRGTGMQIRIHQ
110 120 130 140 150 160
180 190 200 210 220
pF1KB5 IYSGCTKKMKI------SH-KRLNP-------DGKSIRNEDKILTIEVKKGWKEGTKITF
: : ..... .: .:..: .:..: : ::: ... :: :.: ::::
CCDS65 IGPGMVQQIQSVCMECQGHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITF
170 180 190 200 210 220
230 240 250 260 270 280
pF1KB5 PKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRT
:::: . :.::..:: .: : .: : : :... :.: ::::: . :::.::
CCDS65 HGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRT
230 240 250 260 270 280
290 300 310 320 330
pF1KB5 IPVVFK--DVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPER--IPQTSRTVLEQ
: .. . .... : . : .::.:. . : ..: :::::.: ::: . . ..::.
CCDS65 IVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEK
290 300 310 320 330 340
340
pF1KB5 VLPI
.::
CCDS65 LLPERKEVEETDEMDQVELVDFDPNQERRRHYNGEAYEDDEHHPRGGVQCQTS
350 360 370 380 390
340 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 03:41:45 2016 done: Fri Nov 4 03:41:46 2016
Total Scan time: 2.540 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]