Result of FASTA (ccds) for
pF1KB5414
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5414, 341 aa
1>>>pF1KB5414 341 - 341 aa - 341 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.5695+/-0.000918; mu= 6.4663+/- 0.056
mean_var=123.4917+/-25.061, 0's: 0 Z-trim(110.0): 56 B-trim: 429 in 2/51
Lambda= 0.115413
statistics sampled from 11248 (11304) to 11248 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.699), E-opt: 0.2 (0.347), width: 16
Scan time: 2.750
The best scores are: opt bits E(32554)
CCDS2375.1 CREB1 gene_id:1385|Hs108|chr2 ( 341) 2138 366.7 1.5e-101
CCDS2374.1 CREB1 gene_id:1385|Hs108|chr2 ( 327) 1541 267.3 1.2e-71
CCDS7181.1 CREM gene_id:1390|Hs108|chr10 ( 299) 1125 198.1 8e-51
CCDS7180.1 CREM gene_id:1390|Hs108|chr10 ( 300) 1056 186.6 2.3e-47
CCDS7185.1 CREM gene_id:1390|Hs108|chr10 ( 270) 1045 184.7 7.4e-47
CCDS7186.1 CREM gene_id:1390|Hs108|chr10 ( 245) 1043 184.4 8.6e-47
CCDS8803.1 ATF1 gene_id:466|Hs108|chr12 ( 271) 1013 179.4 3e-45
CCDS58074.1 CREM gene_id:1390|Hs108|chr10 ( 282) 656 120.0 2.4e-27
CCDS58075.1 CREM gene_id:1390|Hs108|chr10 ( 138) 554 102.8 1.7e-22
CCDS7187.1 CREM gene_id:1390|Hs108|chr10 ( 120) 502 94.2 6e-20
CCDS7182.1 CREM gene_id:1390|Hs108|chr10 ( 248) 501 94.1 1.3e-19
CCDS7188.1 CREM gene_id:1390|Hs108|chr10 ( 112) 491 92.3 2e-19
CCDS53521.1 CREM gene_id:1390|Hs108|chr10 ( 102) 490 92.1 2.1e-19
CCDS53518.1 CREM gene_id:1390|Hs108|chr10 ( 108) 490 92.1 2.2e-19
CCDS31181.1 CREM gene_id:1390|Hs108|chr10 ( 236) 485 91.4 7.8e-19
CCDS58076.1 CREM gene_id:1390|Hs108|chr10 ( 125) 436 83.2 1.3e-16
CCDS53517.1 CREM gene_id:1390|Hs108|chr10 ( 121) 433 82.7 1.7e-16
CCDS53520.1 CREM gene_id:1390|Hs108|chr10 ( 113) 422 80.8 5.9e-16
CCDS53519.1 CREM gene_id:1390|Hs108|chr10 ( 109) 421 80.7 6.4e-16
CCDS7183.1 CREM gene_id:1390|Hs108|chr10 ( 221) 380 74.0 1.3e-13
CCDS7184.1 CREM gene_id:1390|Hs108|chr10 ( 137) 376 73.2 1.4e-13
>>CCDS2375.1 CREB1 gene_id:1385|Hs108|chr2 (341 aa)
initn: 2138 init1: 2138 opt: 2138 Z-score: 1936.6 bits: 366.7 E(32554): 1.5e-101
Smith-Waterman score: 2138; 100.0% identity (100.0% similar) in 341 aa overlap (1-341:1-341)
10 20 30 40 50 60
pF1KB5 MTMESGAENQQSGDAAVTEAENQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 MTMESGAENQQSGDAAVTEAENQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 GQTVQVHGVIQAAQPSVIQSPQVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 GQTVQVHGVIQAAQPSVIQSPQVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 SQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 SQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 QYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 QYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 VVQAASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAEEAARKREVRLMKNREAAREC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 VVQAASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAEEAARKREVRLMKNREAAREC
250 260 270 280 290 300
310 320 330 340
pF1KB5 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD
:::::::::::::::::::::::::::::::::::::::::
CCDS23 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD
310 320 330 340
>>CCDS2374.1 CREB1 gene_id:1385|Hs108|chr2 (327 aa)
initn: 1510 init1: 1510 opt: 1541 Z-score: 1399.7 bits: 267.3 E(32554): 1.2e-71
Smith-Waterman score: 2007; 95.9% identity (95.9% similar) in 341 aa overlap (1-341:1-327)
10 20 30 40 50 60
pF1KB5 MTMESGAENQQSGDAAVTEAENQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 MTMESGAENQQSGDAAVTEAENQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 GQTVQVHGVIQAAQPSVIQSPQVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTD
::::::::::::::::::::::::::: :::::::::::::::::::
CCDS23 GQTVQVHGVIQAAQPSVIQSPQVQTVQ--------------ISTIAESEDSQESVDSVTD
70 80 90 100
130 140 150 160 170 180
pF1KB5 SQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 SQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSG
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB5 QYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 QYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQV
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB5 VVQAASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAEEAARKREVRLMKNREAAREC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 VVQAASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAEEAARKREVRLMKNREAAREC
230 240 250 260 270 280
310 320 330 340
pF1KB5 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD
:::::::::::::::::::::::::::::::::::::::::
CCDS23 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD
290 300 310 320
>>CCDS7181.1 CREM gene_id:1390|Hs108|chr10 (299 aa)
initn: 1023 init1: 531 opt: 1125 Z-score: 1026.0 bits: 198.1 E(32554): 8e-51
Smith-Waterman score: 1125; 70.3% identity (88.2% similar) in 263 aa overlap (82-339:43-297)
60 70 80 90 100 110
pF1KB5 TVTLVQLPNGQTVQVHGVIQAAQPSVIQSPQVQTVQSSCKDLKRLFSGTQISTIAESEDS
:.:: :.: : .:...:::...:
CCDS71 NPRQMTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPAL------AQVAAIAETDES
20 30 40 50 60
120 130 140 150 160 170
pF1KB5 QESVDSVTDSQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVP
:: ..: ::.:::::::::::::::::.::::.::::.::::.:::: . :.:.:..::
CCDS71 AES-EGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVP
70 80 90 100 110 120
180 190 200 210 220 230
pF1KB5 TPIYQTSSGQYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYA-QTTDG
: :::::.::::::.:::.::..: :.:::::::.:::::..: ::.::.::: :..::
CCDS71 TSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPPGATIVQYAAQSADG
130 140 150 160 170 180
240 250 260 270 280
pF1KB5 -QQILVPSNQVVVQAASGDVQTYQIRTAPTSTIAPGVVMASSPAL---PTQPAEEAARKR
::..::..:::::::.::. ::::: :::... :::::.::. : : ::::.:::
CCDS71 TQQFFVPGSQVVVQAATGDMPTYQIR-APTAALPQGVVMAASPGSLHSPQQLAEEATRKR
190 200 210 220 230 240
290 300 310 320 330 340
pF1KB5 EVRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD
:.:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS71 ELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE
250 260 270 280 290
>>CCDS7180.1 CREM gene_id:1390|Hs108|chr10 (300 aa)
initn: 932 init1: 531 opt: 1056 Z-score: 963.8 bits: 186.6 E(32554): 2.3e-47
Smith-Waterman score: 1056; 66.0% identity (86.4% similar) in 265 aa overlap (82-341:43-299)
60 70 80 90 100 110
pF1KB5 TVTLVQLPNGQTVQVHGVIQAAQPSVIQSPQVQTVQSSCKDLKRLFSGTQISTIAESEDS
:.:: :.: : .:...:::...:
CCDS71 NPRQMTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPAL------AQVAAIAETDES
20 30 40 50 60
120 130 140 150 160 170
pF1KB5 QESVDSVTDSQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVP
:: ..: ::.:::::::::::::::::.::::.::::.::::.:::: . :.:.:..::
CCDS71 AES-EGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVP
70 80 90 100 110 120
180 190 200 210 220 230
pF1KB5 TPIYQTSSGQYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYA-QTTDG
: :::::.::::::.:::.::..: :.:::::::.:::::..: ::.::.::: :..::
CCDS71 TSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPPGATIVQYAAQSADG
130 140 150 160 170 180
240 250 260 270 280
pF1KB5 -QQILVPSNQVVVQAASGDVQTYQIRTAPTSTIAPGVVMASSPAL---PTQPAEEAARKR
::..::..:::::::.::. ::::: :::... :::::.::. : : ::::.:::
CCDS71 TQQFFVPGSQVVVQAATGDMPTYQIR-APTAALPQGVVMAASPGSLHSPQQLAEEATRKR
190 200 210 220 230 240
290 300 310 320 330 340
pF1KB5 EVRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD
:.:::::::::.::::.:::::::::.:::::: ::: :::::..:::. :.:
CCDS71 ELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY
250 260 270 280 290 300
>>CCDS7185.1 CREM gene_id:1390|Hs108|chr10 (270 aa)
initn: 932 init1: 531 opt: 1045 Z-score: 954.7 bits: 184.7 E(32554): 7.4e-47
Smith-Waterman score: 1045; 68.3% identity (89.4% similar) in 246 aa overlap (101-341:26-269)
80 90 100 110 120 130
pF1KB5 QAAQPSVIQSPQVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTDSQKRREILSR
....:::...: :: ..: ::.::::::::
CCDS71 MWWHQHNLCFRRPIEEDYSSGDVEEKVAAIAETDESAES-EGVIDSHKRREILSR
10 20 30 40 50
140 150 160 170 180 190
pF1KB5 RPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSGQYIAITQGGA
:::::::::.::::.::::.::::.:::: . :.:.:..::: :::::.::::::.:::.
CCDS71 RPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQYIAIAQGGT
60 70 80 90 100 110
200 210 220 230 240
pF1KB5 IQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYA-QTTDG-QQILVPSNQVVVQAASGD
::..: :.:::::::.:::::..: ::.::.::: :..:: ::..::..:::::::.::
CCDS71 IQISNPGSDGVQGLQALTMTNSGAPPPGATIVQYAAQSADGTQQFFVPGSQVVVQAATGD
120 130 140 150 160 170
250 260 270 280 290 300
pF1KB5 VQTYQIRTAPTSTIAPGVVMASSPAL---PTQPAEEAARKREVRLMKNREAARECRRKKK
. ::::: :::... :::::.::. : : ::::.::::.:::::::::.::::.::
CCDS71 MPTYQIR-APTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECRRRKK
180 190 200 210 220 230
310 320 330 340
pF1KB5 EYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD
:::::::.:::::: ::: :::::..:::. :.:
CCDS71 EYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY
240 250 260 270
>>CCDS7186.1 CREM gene_id:1390|Hs108|chr10 (245 aa)
initn: 932 init1: 531 opt: 1043 Z-score: 953.5 bits: 184.4 E(32554): 8.6e-47
Smith-Waterman score: 1043; 68.6% identity (89.4% similar) in 245 aa overlap (102-341:2-244)
80 90 100 110 120 130
pF1KB5 AAQPSVIQSPQVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTDSQKRREILSRR
...:::...: :: ..: ::.:::::::::
CCDS71 MVAAIAETDESAES-EGVIDSHKRREILSRR
10 20 30
140 150 160 170 180 190
pF1KB5 PSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSGQYIAITQGGAI
::::::::.::::.::::.::::.:::: . :.:.:..::: :::::.::::::.:::.:
CCDS71 PSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQYIAIAQGGTI
40 50 60 70 80 90
200 210 220 230 240
pF1KB5 QLANNGTDGVQGLQTLTMTNAAATQPGTTILQYA-QTTDG-QQILVPSNQVVVQAASGDV
:..: :.:::::::.:::::..: ::.::.::: :..:: ::..::..:::::::.::.
CCDS71 QISNPGSDGVQGLQALTMTNSGAPPPGATIVQYAAQSADGTQQFFVPGSQVVVQAATGDM
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB5 QTYQIRTAPTSTIAPGVVMASSPAL---PTQPAEEAARKREVRLMKNREAARECRRKKKE
::::: :::... :::::.::. : : ::::.::::.:::::::::.::::.:::
CCDS71 PTYQIR-APTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECRRRKKE
160 170 180 190 200
310 320 330 340
pF1KB5 YVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD
::::::.:::::: ::: :::::..:::. :.:
CCDS71 YVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY
210 220 230 240
>>CCDS8803.1 ATF1 gene_id:466|Hs108|chr12 (271 aa)
initn: 551 init1: 532 opt: 1013 Z-score: 925.8 bits: 179.4 E(32554): 3e-45
Smith-Waterman score: 1013; 68.3% identity (86.8% similar) in 243 aa overlap (101-340:31-270)
80 90 100 110 120 130
pF1KB5 QAAQPSVIQSPQVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTDSQKRREILSR
:.:...:::.::.: ::. .::: . ::.:
CCDS88 MEDSHKSTTSETAPQPGSAVQGAHISHIAQQVSSLSESEESQDSSDSIGSSQKAHGILAR
10 20 30 40 50 60
140 150 160 170 180 190
pF1KB5 RPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSGQYIAITQGGA
::::::::.::::. : .. .:. . :.:...::::::::::::::::. .::
CCDS88 RPSYRKILKDLSSED---TRGRKGDGENSGVSAAVTSMSVPTPIYQTSSGQYIAIAPNGA
70 80 90 100 110
200 210 220 230 240 250
pF1KB5 IQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQVVVQAASGDVQ
.:::. :::::::::::::::...:: ::::::::::.:::::::::::::::.::::.:
CCDS88 LQLASPGTDGVQGLQTLTMTNSGSTQQGTTILQYAQTSDGQQILVPSNQVVVQTASGDMQ
120 130 140 150 160 170
260 270 280 290 300
pF1KB5 TYQIRTAPTSTIAPGVVMASSPA-LPTQPA--EEAARKREVRLMKNREAARECRRKKKEY
::::::.:..: : .:. .::. : .: . .. :::.:::::::::::::::::::
CCDS88 TYQIRTTPSATSLPQTVVMTSPVTLTSQTTKTDDPQLKREIRLMKNREAARECRRKKKEY
180 190 200 210 220 230
310 320 330 340
pF1KB5 VKCLENRVAVLENQNKTLIEELKALKDLYCHKSD
:::::::::::::::::::::::.::::: .::
CCDS88 VKCLENRVAVLENQNKTLIEELKTLKDLYSNKSV
240 250 260 270
>>CCDS58074.1 CREM gene_id:1390|Hs108|chr10 (282 aa)
initn: 971 init1: 531 opt: 656 Z-score: 604.3 bits: 120.0 E(32554): 2.4e-27
Smith-Waterman score: 1011; 65.1% identity (85.3% similar) in 258 aa overlap (101-341:26-281)
80 90 100 110 120 130
pF1KB5 QAAQPSVIQSPQVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTDSQKRREILSR
....:::...: :: ..: ::.::::::::
CCDS58 MWWHQHNLCFRRPIEEDYSSGDVEEKVAAIAETDESAES-EGVIDSHKRREILSR
10 20 30 40 50
140 150 160 170 180 190
pF1KB5 RPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSGQYIAITQGGA
:::::::::.::::.::::.::::.:::: . :.:.:..::: :::::.::::::.:::.
CCDS58 RPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQYIAIAQGGT
60 70 80 90 100 110
200 210 220 230 240
pF1KB5 IQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYA-QTTDG-QQILVPSNQVVVQ-----
::..: :.:::::::.:::::..: ::.::.::: :..:: ::..::..:::::
CCDS58 IQISNPGSDGVQGLQALTMTNSGAPPPGATIVQYAAQSADGTQQFFVPGSQVVVQDEETE
120 130 140 150 160 170
250 260 270 280 290
pF1KB5 -------AASGDVQTYQIRTAPTSTIAPGVVMASSPAL---PTQPAEEAARKREVRLMKN
::.::. ::::: :::... :::::.::. : : ::::.::::.:::::
CCDS58 LAPSHMAAATGDMPTYQIR-APTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKN
180 190 200 210 220 230
300 310 320 330 340
pF1KB5 REAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD
::::.::::.:::::::::.:::::: ::: :::::..:::. :.:
CCDS58 REAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY
240 250 260 270 280
>>CCDS58075.1 CREM gene_id:1390|Hs108|chr10 (138 aa)
initn: 487 init1: 303 opt: 554 Z-score: 517.4 bits: 102.8 E(32554): 1.7e-22
Smith-Waterman score: 554; 67.4% identity (86.2% similar) in 138 aa overlap (209-341:1-137)
180 190 200 210 220 230
pF1KB5 SGQYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYA-QTTDG-QQILVP
:::..: ::.::.::: :..:: ::..::
CCDS58 MTNSGAPPPGATIVQYAAQSADGTQQFFVP
10 20 30
240 250 260 270 280 290
pF1KB5 SNQVVVQAASGDVQTYQIRTAPTSTIAPGVVMASSPAL---PTQPAEEAARKREVRLMKN
..:::::::.::. ::::: :::... :::::.::. : : ::::.::::.:::::
CCDS58 GSQVVVQAATGDMPTYQIR-APTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKN
40 50 60 70 80
300 310 320 330 340
pF1KB5 REAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD
::::.::::.:::::::::.:::::: ::: :::::..:::. :.:
CCDS58 REAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY
90 100 110 120 130
>>CCDS7187.1 CREM gene_id:1390|Hs108|chr10 (120 aa)
initn: 446 init1: 394 opt: 502 Z-score: 471.6 bits: 94.2 E(32554): 6e-20
Smith-Waterman score: 502; 73.9% identity (85.2% similar) in 115 aa overlap (228-339:8-118)
200 210 220 230 240 250
pF1KB5 TDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQVVVQAASGDVQTYQIRTA
:: . :.::. . ::.::. ::::: :
CCDS71 MAVTGDDTDEETELAPSH---MAAATGDMPTYQIR-A
10 20 30
260 270 280 290 300 310
pF1KB5 PTSTIAPGVVMASSPAL---PTQPAEEAARKREVRLMKNREAARECRRKKKEYVKCLENR
::... :::::.::. : : ::::.::::.::::::::::::::::::::::::::
CCDS71 PTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECRRKKKEYVKCLENR
40 50 60 70 80 90
320 330 340
pF1KB5 VAVLENQNKTLIEELKALKDLYCHKSD
:::::::::::::::::::::::::
CCDS71 VAVLENQNKTLIEELKALKDLYCHKVE
100 110 120
341 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 22:57:47 2016 done: Wed Nov 2 22:57:48 2016
Total Scan time: 2.750 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]