Result of FASTA (ccds) for
pF1KB5427
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5427, 378 aa
1>>>pF1KB5427 378 - 378 aa - 378 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5116+/-0.000869; mu= 15.0073+/- 0.052
mean_var=60.6802+/-12.071, 0's: 0 Z-trim(105.5): 10 B-trim: 0 in 0/51
Lambda= 0.164646
statistics sampled from 8443 (8449) to 8443 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.632), E-opt: 0.2 (0.26), width: 16
Scan time: 2.640
The best scores are: opt bits E(32554)
CCDS5280.1 AGPAT4 gene_id:56895|Hs108|chr6 ( 378) 2591 624.0 6.6e-179
CCDS13703.1 AGPAT3 gene_id:56894|Hs108|chr21 ( 376) 1661 403.1 2.1e-112
CCDS42670.1 LCLAT1 gene_id:253558|Hs108|chr2 ( 376) 387 100.5 2.6e-21
CCDS1772.1 LCLAT1 gene_id:253558|Hs108|chr2 ( 414) 387 100.5 2.8e-21
CCDS34796.1 AGPAT5 gene_id:55326|Hs108|chr8 ( 364) 261 70.6 2.6e-12
>>CCDS5280.1 AGPAT4 gene_id:56895|Hs108|chr6 (378 aa)
initn: 2591 init1: 2591 opt: 2591 Z-score: 3325.4 bits: 624.0 E(32554): 6.6e-179
Smith-Waterman score: 2591; 100.0% identity (100.0% similar) in 378 aa overlap (1-378:1-378)
10 20 30 40 50 60
pF1KB5 MDLAGLLKSQFLCHLVFCYVFIASGLIINTIQLFTLLLWPINKQLFRKINCRLSYCISSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 MDLAGLLKSQFLCHLVFCYVFIASGLIINTIQLFTLLLWPINKQLFRKINCRLSYCISSQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 LVMLLEWWSGTECTIFTDPRAYLKYGKENAIVVLNHKFEIDFLCGWSLSERFGLLGGSKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 LVMLLEWWSGTECTIFTDPRAYLKYGKENAIVVLNHKFEIDFLCGWSLSERFGLLGGSKV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LAKKELAYVPIIGWMWYFTEMVFCSRKWEQDRKTVATSLQHLRDYPEKYFFLIHCEGTRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 LAKKELAYVPIIGWMWYFTEMVFCSRKWEQDRKTVATSLQHLRDYPEKYFFLIHCEGTRF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 TEKKHEISMQVARAKGLPRLKHHLLPRTKGFAITVRSLRNVVSAVYDCTLNFRNNENPTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 TEKKHEISMQVARAKGLPRLKHHLLPRTKGFAITVRSLRNVVSAVYDCTLNFRNNENPTL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 LGVLNGKKYHADLYVRRIPLEDIPEDDDECSAWLHKLYQEKDAFQEEYYRTGTFPETPMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 LGVLNGKKYHADLYVRRIPLEDIPEDDDECSAWLHKLYQEKDAFQEEYYRTGTFPETPMV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 PPRRPWTLVNWLFWASLVLYPFFQFLVSMIRSGSSLTLASFILVFFVASVGVRWMIGVTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 PPRRPWTLVNWLFWASLVLYPFFQFLVSMIRSGSSLTLASFILVFFVASVGVRWMIGVTE
310 320 330 340 350 360
370
pF1KB5 IDKGSAYGNSDSKQKLND
::::::::::::::::::
CCDS52 IDKGSAYGNSDSKQKLND
370
>>CCDS13703.1 AGPAT3 gene_id:56894|Hs108|chr21 (376 aa)
initn: 1700 init1: 1651 opt: 1661 Z-score: 2131.6 bits: 403.1 E(32554): 2.1e-112
Smith-Waterman score: 1661; 61.9% identity (84.8% similar) in 375 aa overlap (1-375:1-375)
10 20 30 40 50 60
pF1KB5 MDLAGLLKSQFLCHLVFCYVFIASGLIINTIQLFTLLLWPINKQLFRKINCRLSYCISSQ
: : ..::.::. ::. .::..:::.:: .:: :: :::..:::.:..::::.: . ::
CCDS13 MGLLAFLKTQFVLHLLVGFVFVVSGLVINFVQLCTLALWPVSKQLYRRLNCRLAYSLWSQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 LVMLLEWWSGTECTIFTDPRAYLKYGKENAIVVLNHKFEIDFLCGWSLSERFGLLGGSKV
::::::::: ::::.::: . ..:::.:...:::.:::::::::.. ::::.::.:::
CCDS13 LVMLLEWWSCTECTLFTDQATVERFGKEHAVIILNHNFEIDFLCGWTMCERFGVLGSSKV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LAKKELAYVPIIGWMWYFTEMVFCSRKWEQDRKTVATSLQHLRDYPEKYFFLIHCEGTRF
:::::: :::.::: ::: :.:::.::::.:: ::. .:..: :::: ..::..::::::
CCDS13 LAKKELLYVPLIGWTWYFLEIVFCKRKWEEDRDTVVEGLRRLSDYPEYMWFLLYCEGTRF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 TEKKHEISMQVARAKGLPRLKHHLLPRTKGFAITVRSLRNVVSAVYDCTLNFRNNENPTL
:: ::..::.:: ::::: ::.:::::::::. .:. ::..:.:::: :::::.:.::.:
CCDS13 TETKHRVSMEVAAAKGLPVLKYHLLPRTKGFTTAVKCLRGTVAAVYDVTLNFRGNKNPSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 LGVLNGKKYHADLYVRRIPLEDIPEDDDECSAWLHKLYQEKDAFQEEYYRTGTFPETPMV
::.: ::::.::. :::.:::::: :. : . :::::::::::.:: : . : :: .
CCDS13 LGILYGKKYEADMCVRRFPLEDIPLDEKEAAQWLHKLYQEKDALQEIYNQKGMFPGEQFK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 PPRRPWTLVNWLFWASLVLYPFFQFLVSMIRSGSSLTLASFILVFFVASVGVRWMIGVTE
: ::::::.:.: ::...: :.:.:..... ::: : . .:. .:: ::: .:::::
CCDS13 PARRPWTLLNFLSWATILLSPLFSFVLGVFASGSPLLILTFLGFVGAASFGVRRLIGVTE
310 320 330 340 350 360
370
pF1KB5 IDKGSAYGNSDSKQKLND
:.:::.:::.. :.:
CCDS13 IEKGSSYGNQEFKKKE
370
>>CCDS42670.1 LCLAT1 gene_id:253558|Hs108|chr2 (376 aa)
initn: 279 init1: 250 opt: 387 Z-score: 496.1 bits: 100.5 E(32554): 2.6e-21
Smith-Waterman score: 388; 26.9% identity (56.0% similar) in 323 aa overlap (36-343:29-345)
10 20 30 40 50 60
pF1KB5 LLKSQFLCHLVFCYVFIASGLIINTIQLFTLLLWPINKQLFRKINCRLSYCISSQLVMLL
: : .: . .: :: :: . : ::
CCDS42 MVSWKGIYFILTLFWGSFFGSIFMLSPFLPLMFVNPSWYRWINNRLVATWLTLPVALL
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 EWWSGTECTIFTDPRAYLKYGKENAIVVLNHKFEIDFLCGWSLSERFGLLGGSKVLAKKE
: :.. : : :.. : : .....::. ..:.. :. :.. : :. :
CCDS42 ETMFGVKVIITGD--AFVP-G-ERSVIIMNHRTRMDWMFLWNCLMRYSYLRLEKICLKAS
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB5 LAYVPIIGWMWYFTEMVFCSRKWEQDRKTVATSLQHLRDYPEKYFFLIHCEGTRFTEKKH
: :: .:: . ..: :::..:.. .... : : .:: ::: .::...
CCDS42 LKGVPGFGWAMQAAAYIFIHRKWKDDKSHFEDMIDYFCDIHEPLQLLIFPEGTDLTENSK
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB5 EISMQVARAKGLPRLKHHLLPRTKGFAITVRSLRN--VVSAVYDCTLNFRNNENPTLLGV
: :. .:: . .. : ::: ::...: ::. ..::.: :. . .: . .
CCDS42 SRSNAFAEKNGLQKYEYVLHPRTTGFTFVVDRLREGKNLDAVHDITVAYPHNIPQSEKHL
180 190 200 210 220 230
250 260 270 280 290
pF1KB5 LNGK-KYHADLYVRRIPLEDIPEDDDECSAWLHKLYQEKDAFQEEYY---RTGTFPETPM
:.: . ..:.: :.. .: . .. . : :: ..::. . .: .. : .
CCDS42 LQGDFPREIHFHVHRYPIDTLPTSKEDLQLWCHKRWEEKEERLRSFYQGEKNFYFTGQSV
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 VPPRRPWT------LVNWLFWASLVLYP---FFQFLVSMIRSGSSLTLASFILVFFVASV
.:: . :.. :.:. .. : .. .: :... .:.. :.:
CCDS42 IPPCKSELRVLVVKLLSILYWT--LFSPAMCLLIYLYSLVKWYFIITIVIFVLQERIFGG
300 310 320 330 340 350
360 370
pF1KB5 GVRWMIGVTEIDKGSAYGNSDSKQKLND
CCDS42 LEIIELACYRLLHKQPHLNSKKNE
360 370
>>CCDS1772.1 LCLAT1 gene_id:253558|Hs108|chr2 (414 aa)
initn: 279 init1: 250 opt: 387 Z-score: 495.4 bits: 100.5 E(32554): 2.8e-21
Smith-Waterman score: 388; 26.9% identity (56.0% similar) in 323 aa overlap (36-343:67-383)
10 20 30 40 50 60
pF1KB5 LLKSQFLCHLVFCYVFIASGLIINTIQLFTLLLWPINKQLFRKINCRLSYCISSQLVMLL
: : .: . .: :: :: . : ::
CCDS17 GIMVSWKGIYFILTLFWGSFFGSIFMLSPFLPLMFVNPSWYRWINNRLVATWLTLPVALL
40 50 60 70 80 90
70 80 90 100 110 120
pF1KB5 EWWSGTECTIFTDPRAYLKYGKENAIVVLNHKFEIDFLCGWSLSERFGLLGGSKVLAKKE
: :.. : : :.. : : .....::. ..:.. :. :.. : :. :
CCDS17 ETMFGVKVIITGD--AFVP-G-ERSVIIMNHRTRMDWMFLWNCLMRYSYLRLEKICLKAS
100 110 120 130 140 150
130 140 150 160 170 180
pF1KB5 LAYVPIIGWMWYFTEMVFCSRKWEQDRKTVATSLQHLRDYPEKYFFLIHCEGTRFTEKKH
: :: .:: . ..: :::..:.. .... : : .:: ::: .::...
CCDS17 LKGVPGFGWAMQAAAYIFIHRKWKDDKSHFEDMIDYFCDIHEPLQLLIFPEGTDLTENSK
160 170 180 190 200 210
190 200 210 220 230 240
pF1KB5 EISMQVARAKGLPRLKHHLLPRTKGFAITVRSLRN--VVSAVYDCTLNFRNNENPTLLGV
: :. .:: . .. : ::: ::...: ::. ..::.: :. . .: . .
CCDS17 SRSNAFAEKNGLQKYEYVLHPRTTGFTFVVDRLREGKNLDAVHDITVAYPHNIPQSEKHL
220 230 240 250 260 270
250 260 270 280 290
pF1KB5 LNGK-KYHADLYVRRIPLEDIPEDDDECSAWLHKLYQEKDAFQEEYY---RTGTFPETPM
:.: . ..:.: :.. .: . .. . : :: ..::. . .: .. : .
CCDS17 LQGDFPREIHFHVHRYPIDTLPTSKEDLQLWCHKRWEEKEERLRSFYQGEKNFYFTGQSV
280 290 300 310 320 330
300 310 320 330 340 350
pF1KB5 VPPRRPWT------LVNWLFWASLVLYP---FFQFLVSMIRSGSSLTLASFILVFFVASV
.:: . :.. :.:. .. : .. .: :... .:.. :.:
CCDS17 IPPCKSELRVLVVKLLSILYWT--LFSPAMCLLIYLYSLVKWYFIITIVIFVLQERIFGG
340 350 360 370 380 390
360 370
pF1KB5 GVRWMIGVTEIDKGSAYGNSDSKQKLND
CCDS17 LEIIELACYRLLHKQPHLNSKKNE
400 410
>>CCDS34796.1 AGPAT5 gene_id:55326|Hs108|chr8 (364 aa)
initn: 221 init1: 131 opt: 261 Z-score: 334.6 bits: 70.6 E(32554): 2.6e-12
Smith-Waterman score: 350; 25.0% identity (58.6% similar) in 324 aa overlap (1-310:1-313)
10 20 30 40 50
pF1KB5 MDLAGLLKSQFLCHLVFCYVFIASG-LIINTIQLFTLLLWPINKQLFRKINCRLSYCISS
: :. .:.. . .:. :..... . . .. :: . .... .. :: ::. .
CCDS34 MLLSLVLHTYSMRYLLPSVVLLGTAPTYVLAWGVWRLLSAFLPARFYQALDDRL-YCVYQ
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 QLVMLL-EWWSGTECTIFTDPRAYLKYGKENAIVVLNHKFEIDFLCGWSLSERFGLLGGS
..:... : ..:.. .. : : .::: : . ::. .:.. . :. : . ::
CCDS34 SMVLFFFENYTGVQILLYGD----LPKNKENIIYLANHQSTVDWIVADILAIRQNALGHV
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 KVLAKKELAYVPIIGWMWYFTEM--VFCSRKWEQDRKTVATSLQHLRDYPEKYFFLIHCE
. . :. : ..:. : ::.. .. .:. . ..: . ..:: : ....: :
CCDS34 RYVLKEGLKWLPLYG--CYFAQHGGIYVKRSAKFNEKEMRNKLQSYVDAGTPMYLVIFPE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 GTRFTEKKHEI---SMQVARAKGLPRLKHHLLPRTKGFAITVRSLRNVVSAVYDCTLNFR
:::.. .. .. :. : .:: ::: : :: :. .. ..: ..:.:: :. ..
CCDS34 GTRYNPEQTKVLSASQAFAAQRGLAVLKHVLTPRIKATHVAFDCMKNYLDAIYDVTVVYE
180 190 200 210 220 230
240 250 260 270 280
pF1KB5 NN-------ENPTLLGVLNGKKYHADLYVRRIPLEDIPEDDDECSAWLHKLYQEKDAFQE
.. :.::. : . . ... :: .:.::.... :::. .. :: .
CCDS34 GKDDGGQRRESPTMTEFLCKECPKIHIHIDRIDKKDVPEEQEHMRRWLHERFEIKDKMLI
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB5 EYYRTGTFPETPMVPPRRPWTLVNWLFWASLVLYPFFQFLVSMIRSGSSLTLASFILVFF
:.:.. :. : : : ::
CCDS34 EFYES---PD-PERRKRFPGKSVNSKLSIKKTLPSMLILSGLTAGMLMTDAGRKLYVNTW
300 310 320 330 340
378 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 12:46:51 2016 done: Sat Nov 5 12:46:51 2016
Total Scan time: 2.640 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]