Result of FASTA (ccds) for
pF1KB5446
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5446, 655 aa
1>>>pF1KB5446 655 - 655 aa - 655 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8313+/-0.000938; mu= 16.9159+/- 0.056
mean_var=72.8629+/-14.734, 0's: 0 Z-trim(105.3): 30 B-trim: 8 in 1/48
Lambda= 0.150252
statistics sampled from 8304 (8328) to 8304 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.617), E-opt: 0.2 (0.256), width: 16
Scan time: 3.690
The best scores are: opt bits E(32554)
CCDS11090.1 ACADVL gene_id:37|Hs108|chr17 ( 655) 4259 932.9 0
CCDS58509.1 ACADVL gene_id:37|Hs108|chr17 ( 678) 4133 905.6 0
CCDS42249.1 ACADVL gene_id:37|Hs108|chr17 ( 633) 3829 839.6 0
CCDS3053.1 ACAD9 gene_id:28976|Hs108|chr3 ( 621) 1697 377.5 3.1e-104
CCDS10057.2 IVD gene_id:3712|Hs108|chr15 ( 426) 717 165.0 2e-40
CCDS9207.1 ACADS gene_id:35|Hs108|chr12 ( 412) 714 164.3 3e-40
CCDS53930.1 IVD gene_id:3712|Hs108|chr15 ( 396) 712 163.9 3.9e-40
CCDS7634.1 ACADSB gene_id:36|Hs108|chr10 ( 432) 710 163.5 5.7e-40
CCDS81518.1 ACADSB gene_id:36|Hs108|chr10 ( 330) 674 155.6 1e-37
CCDS65562.1 ACADM gene_id:34|Hs108|chr1 ( 385) 633 146.8 5.4e-35
CCDS668.1 ACADM gene_id:34|Hs108|chr1 ( 421) 633 146.8 5.9e-35
CCDS44165.1 ACADM gene_id:34|Hs108|chr1 ( 425) 633 146.8 5.9e-35
CCDS72807.1 ACADM gene_id:34|Hs108|chr1 ( 454) 611 142.0 1.7e-33
CCDS8498.1 ACAD8 gene_id:27034|Hs108|chr11 ( 415) 576 134.4 3e-31
CCDS2389.1 ACADL gene_id:33|Hs108|chr2 ( 430) 565 132.0 1.6e-30
CCDS76610.1 ACADS gene_id:35|Hs108|chr12 ( 408) 481 113.8 4.7e-25
CCDS3074.1 ACAD11 gene_id:84129|Hs108|chr3 ( 780) 339 83.2 1.5e-15
CCDS31903.1 ACAD10 gene_id:80724|Hs108|chr12 (1059) 339 83.2 2e-15
CCDS44973.1 ACAD10 gene_id:80724|Hs108|chr12 (1090) 339 83.2 2.1e-15
CCDS12286.1 GCDH gene_id:2639|Hs108|chr19 ( 438) 297 74.0 5.1e-13
>>CCDS11090.1 ACADVL gene_id:37|Hs108|chr17 (655 aa)
initn: 4259 init1: 4259 opt: 4259 Z-score: 4986.0 bits: 932.9 E(32554): 0
Smith-Waterman score: 4259; 100.0% identity (100.0% similar) in 655 aa overlap (1-655:1-655)
10 20 30 40 50 60
pF1KB5 MQAARMAASLGRQLLRLGGGSSRLTALLGQPRPGPARRPYAGGAAQLALDKSDSHPSDAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MQAARMAASLGRQLLRLGGGSSRLTALLGQPRPGPARRPYAGGAAQLALDKSDSHPSDAL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 TRKKPAKAESKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVSRFFEEVNDPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TRKKPAKAESKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVSRFFEEVNDPA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 KNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 KNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 HQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 HQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 YTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGPPEKKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 YTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGPPEKKM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 GIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGIIAKAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 GIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGIIAKAV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 DHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGATDFQIEAAISKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGATDFQIEAAISKI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 FGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVALQGCMDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 FGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVALQGCMDK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 GKELSGLGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLVHPELSRSGELAVRAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 GKELSGLGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLVHPELSRSGELAVRAL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB5 EQFATVVEAKLIKHKKGIVNEQFLLQRLADGAIDLYAMVVVLSRASRSLSEGHPTAQHEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 EQFATVVEAKLIKHKKGIVNEQFLLQRLADGAIDLYAMVVVLSRASRSLSEGHPTAQHEK
550 560 570 580 590 600
610 620 630 640 650
pF1KB5 MLCDTWCIEAAARIREGMAALQSDPWQQELYRNFKSISKALVERGGVVTSNPLGF
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MLCDTWCIEAAARIREGMAALQSDPWQQELYRNFKSISKALVERGGVVTSNPLGF
610 620 630 640 650
>>CCDS58509.1 ACADVL gene_id:37|Hs108|chr17 (678 aa)
initn: 4133 init1: 4133 opt: 4133 Z-score: 4838.1 bits: 905.6 E(32554): 0
Smith-Waterman score: 4133; 100.0% identity (100.0% similar) in 635 aa overlap (21-655:44-678)
10 20 30 40 50
pF1KB5 MQAARMAASLGRQLLRLGGGSSRLTALLGQPRPGPARRPYAGGAAQLALD
::::::::::::::::::::::::::::::
CCDS58 MGKEIEAEAQRPLRQTWRPGQPPAMTAKTMSSRLTALLGQPRPGPARRPYAGGAAQLALD
20 30 40 50 60 70
60 70 80 90 100 110
pF1KB5 KSDSHPSDALTRKKPAKAESKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KSDSHPSDALTRKKPAKAESKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVS
80 90 100 110 120 130
120 130 140 150 160 170
pF1KB5 RFFEEVNDPAKNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RFFEEVNDPAKNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMH
140 150 160 170 180 190
180 190 200 210 220 230
pF1KB5 DLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 DLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRT
200 210 220 230 240 250
240 250 260 270 280 290
pF1KB5 SAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGG
260 270 280 290 300 310
300 310 320 330 340 350
pF1KB5 ITHGPPEKKMGIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ITHGPPEKKMGIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAG
320 330 340 350 360 370
360 370 380 390 400 410
pF1KB5 TMRGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGATD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TMRGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGATD
380 390 400 410 420 430
420 430 440 450 460 470
pF1KB5 FQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 FQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRL
440 450 460 470 480 490
480 490 500 510 520 530
pF1KB5 FVALQGCMDKGKELSGLGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLVHPELS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 FVALQGCMDKGKELSGLGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLVHPELS
500 510 520 530 540 550
540 550 560 570 580 590
pF1KB5 RSGELAVRALEQFATVVEAKLIKHKKGIVNEQFLLQRLADGAIDLYAMVVVLSRASRSLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RSGELAVRALEQFATVVEAKLIKHKKGIVNEQFLLQRLADGAIDLYAMVVVLSRASRSLS
560 570 580 590 600 610
600 610 620 630 640 650
pF1KB5 EGHPTAQHEKMLCDTWCIEAAARIREGMAALQSDPWQQELYRNFKSISKALVERGGVVTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 EGHPTAQHEKMLCDTWCIEAAARIREGMAALQSDPWQQELYRNFKSISKALVERGGVVTS
620 630 640 650 660 670
pF1KB5 NPLGF
:::::
CCDS58 NPLGF
>>CCDS42249.1 ACADVL gene_id:37|Hs108|chr17 (633 aa)
initn: 3819 init1: 3819 opt: 3829 Z-score: 4482.5 bits: 839.6 E(32554): 0
Smith-Waterman score: 4065; 96.6% identity (96.6% similar) in 655 aa overlap (1-655:1-633)
10 20 30 40 50 60
pF1KB5 MQAARMAASLGRQLLRLGGGSSRLTALLGQPRPGPARRPYAGGAAQLALDKSDSHPSDAL
::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MQAARMAASLGRQLLRLGGGSSRLTALLGQPRPGPARRPYAGGAAQ--------------
10 20 30 40
70 80 90 100 110 120
pF1KB5 TRKKPAKAESKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVSRFFEEVNDPA
::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 --------ESKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVSRFFEEVNDPA
50 60 70 80 90
130 140 150 160 170 180
pF1KB5 KNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 KNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGA
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB5 HQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 HQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKY
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB5 YTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGPPEKKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 YTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGPPEKKM
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB5 GIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGIIAKAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 GIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGIIAKAV
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB5 DHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGATDFQIEAAISKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 DHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGATDFQIEAAISKI
340 350 360 370 380 390
430 440 450 460 470 480
pF1KB5 FGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVALQGCMDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 FGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVALQGCMDK
400 410 420 430 440 450
490 500 510 520 530 540
pF1KB5 GKELSGLGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLVHPELSRSGELAVRAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 GKELSGLGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLVHPELSRSGELAVRAL
460 470 480 490 500 510
550 560 570 580 590 600
pF1KB5 EQFATVVEAKLIKHKKGIVNEQFLLQRLADGAIDLYAMVVVLSRASRSLSEGHPTAQHEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 EQFATVVEAKLIKHKKGIVNEQFLLQRLADGAIDLYAMVVVLSRASRSLSEGHPTAQHEK
520 530 540 550 560 570
610 620 630 640 650
pF1KB5 MLCDTWCIEAAARIREGMAALQSDPWQQELYRNFKSISKALVERGGVVTSNPLGF
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MLCDTWCIEAAARIREGMAALQSDPWQQELYRNFKSISKALVERGGVVTSNPLGF
580 590 600 610 620 630
>>CCDS3053.1 ACAD9 gene_id:28976|Hs108|chr3 (621 aa)
initn: 948 init1: 566 opt: 1697 Z-score: 1984.9 bits: 377.5 E(32554): 3.1e-104
Smith-Waterman score: 1697; 46.6% identity (75.0% similar) in 599 aa overlap (60-653:29-617)
30 40 50 60 70 80
pF1KB5 QPRPGPARRPYAGGAAQLALDKSDSHPSDALTRKKPAKAESKSFAVGMFKGQLTTDQVFP
: : .: ..:: .: :.. .:::
CCDS30 MSGCGLFLRTTAAARACRGLVVSTANRRLLRTSP---PVRAFAKELFLGKIKKKEVFP
10 20 30 40 50
90 100 110 120 130 140
pF1KB5 YPSVLNEEQTQFLKELVEPVSRFFEEVNDPAKNDALEMVEETTWQGLKELGAFGLQVPSE
.: : ..: .. ..... :: .:: : : : : . . : . :: :: :::::: :
CCDS30 FPEVSQDELNE-INQFLGPVEKFFTEEVDSRKIDQEGKIPDETLEKLKSLGLFGLQVPEE
60 70 80 90 100 110
150 160 170 180 190 200
pF1KB5 LGGVGLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGE
::.:. ::.:.:: ::..: : .. .::.:::.::.:::.: ::. :: ::::::::::
CCDS30 YGGLGFSNTMYSRLGEIISM-DGSITVTLAAHQAIGLKGIILAGTEEQKAKYLPKLASGE
120 130 140 150 160 170
210 220 230 240 250 260
pF1KB5 TVAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTD
.::::::::.:::::::::. :. : :.: :::::.::.:::::.:::::::: :.:
CCDS30 HIAAFCLTEPASGSDAASIRSRATLSEDKKHYILNGSKVWITNGGLANIFTVFAKTEVVD
180 190 200 210 220 230
270 280 290 300 310 320
pF1KB5 PATGAVKEKITAFVVERGFGGITHGPPEKKMGIKASNTAEVFFDGVRVPSENVLGEVGSG
. :.::.:::::.::: :::.:.: :: :.::..::: :: :.....: ::.:::::.:
CCDS30 -SDGSVKDKITAFIVERDFGGVTNGKPEDKLGIRGSNTCEVHFENTKIPVENILGEVGDG
240 250 260 270 280 290
330 340 350 360 370 380
pF1KB5 FKVAMHILNNGRFGMAAALAGTMRGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVML
:::::.:::.:::.:....:: .. .: ....: .: ::.... .:::::::.: :..
CCDS30 FKVAMNILNSGRFSMGSVVAGLLKRLIEMTAEYACTRKQFNKRLSEFGLIQEKFALMAQK
300 310 320 330 340 350
390 400 410 420 430 440
pF1KB5 QYVTESMAYMVSANMDQ-GATDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGV
:: :::.:.... .:: : : .::::. :.:.:::::. ..: .::.::.:. ..
CCDS30 AYVMESMTYLTAGMLDQPGFPDCSIEAAMVKVFSSEAAWQCVSEALQILGGLGYTRDYPY
360 370 380 390 400 410
450 460 470 480 490 500
pF1KB5 ERVLRDLRIFRIFEGTNDILRLFVALQGCMDKGKELSGLGSALKNPFGNAGLLLGEAGKQ
::.::: ::. ::::::.:::...:: : . :. :. ::. .... .. .:..
CCDS30 ERILRDTRILLIFEGTNEILRMYIALTGLQHAGRILTTRIHELKQ--AKVSTVMDTVGRR
420 430 440 450 460 470
510 520 530 540 550 560
pF1KB5 LRRRAGLGSGLSLSG---LVHPELSRSGELAVRALEQFATVVEAKLIKHKKGIVNEQFLL
:: : :.:.: .::: :. :.. . :. .::. :.. : :..::..:
CCDS30 LRDSLGRTVDLGLTGNHGVVHPSLADSANKFEENTYCFGRTVETLLLRFGKTIMEEQLVL
480 490 500 510 520 530
570 580 590 600 610 620
pF1KB5 QRLADGAIDLYAMVVVLSRASRSLSEGHPTAQHEKMLCDTWCIEAAARIREGMAALQSDP
.:.:. :.::.:..::::::::. : . .:: .: .:.:.:: ... .. : :
CCDS30 KRVANILINLYGMTAVLSRASRSIRIGLRNHDHEVLLANTFCVEA--YLQNLFSLSQLDK
540 550 560 570 580
630 640 650
pF1KB5 WQQE-LYRNFKSISKALVERGGVVTSNPLGF
. : : ...:..:. ..:. . . ..::
CCDS30 YAPENLDEQIKKVSQQILEKRAYICAHPLDRTC
590 600 610 620
>>CCDS10057.2 IVD gene_id:3712|Hs108|chr15 (426 aa)
initn: 708 init1: 261 opt: 717 Z-score: 839.4 bits: 165.0 E(32554): 2e-40
Smith-Waterman score: 717; 32.8% identity (68.0% similar) in 384 aa overlap (94-472:45-417)
70 80 90 100 110 120
pF1KB5 KPAKAESKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVSRFFEEVNDPA---
:.::: : : . ...:..: :
CCDS10 VASWRLRPPLAGFVSQRAHSLLPVDDAINGLSEEQRQ----LRQTMAKFLQEHLAPKAQE
20 30 40 50 60 70
130 140 150 160 170
pF1KB5 --KNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITL
... .. ..: :. : .::..:. .: . :: :: ... ..: .. . .::..
CCDS10 IDRSNEFKNLREF-WKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLSY
80 90 100 110 120
180 190 200 210 220 230
pF1KB5 GAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCG
:::... .. .. :..:::::::::: ::: ..:. ..::..:::..:.. .: . :
CCDS10 GAHSNLCINQLVRNGNEAQKEKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKK--G
130 140 150 160 170 180
240 250 260 270 280 290
pF1KB5 KYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGPPEK
..: :::.:.::.:: ::.. :.:: :: :. ... ::::.::.:. :.. .
CCDS10 NHYILNGNKFWITNGPDADVLIVYAK---TDLAAVPASRGITAFIVEKGMPGFSTSKKLD
190 200 210 220 230 240
300 310 320 330 340 350
pF1KB5 KMGIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGIIAK
:.:...::: :..:. ..:. :.::. ..: : : :. :. .:.. : :.... .
CCDS10 KLGMRGSNTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERLVLAGGPLGLMQAVLDH
250 260 270 280 290 300
360 370 380 390 400 410
pF1KB5 AVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGATDFQIEAAIS
.. . : ::.:: .: :.: :.: : .. ....: :. :.: . :..
CCDS10 TIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVI
310 320 330 340 350 360
420 430 440 450 460 470
pF1KB5 KIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVALQGCM
....: : .:. . :: .:: :.... . : ::: ....: ::... :: .
CCDS10 -LYSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVIGRAFNA
370 380 390 400 410 420
480 490 500 510 520 530
pF1KB5 DKGKELSGLGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLVHPELSRSGELAVR
CCDS10 DFH
>>CCDS9207.1 ACADS gene_id:35|Hs108|chr12 (412 aa)
initn: 711 init1: 280 opt: 714 Z-score: 836.1 bits: 164.3 E(32554): 3e-40
Smith-Waterman score: 714; 35.5% identity (62.7% similar) in 386 aa overlap (90-473:29-403)
60 70 80 90 100 110
pF1KB5 LTRKKPAKAESKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVSRFFEEVNDP
: :: : :. :.. : :. :
CCDS92 MAAALLARASGPARRALCPRAWRQLHTIYQSVELPETHQM---LLQTCRDFAEKELFP
10 20 30 40 50
120 130 140 150 160 170
pF1KB5 --AKNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGIT
:. : .. . . . :: ....:: ::::.:: :: .: .. ..:.
CCDS92 IAAQVDKEHLFPAAQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGCASTGVI
60 70 80 90 100 110
180 190 200 210 220 230
pF1KB5 LGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPC
.....:. . :: ::.: ::. .. ..::. .. : :.::..::::.. :.:
CCDS92 MSVNNSLYLGPILKFGSKEQKQAWVTPFTSGDKIGCFALSEPGNGSDAGAASTTARAE--
120 130 140 150 160 170
240 250 260 270 280 290
pF1KB5 GKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGPPE
: ..:::.: ::.:. :. .:::.: . : :.::.: :.: : :
CCDS92 GDSWVLNGTKAWITNAWEASAAVVFASTDRALQNKG-----ISAFLVPMPTPGLTLGKKE
180 190 200 210 220
300 310 320 330 340 350
pF1KB5 KKMGIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGIIA
:.::..:.::...:. :.:....::: : :::.::. :. ::.:.:. : . .
CCDS92 DKLGIRGSSTANLIFEDCRIPKDSILGEPGMGFKIAMQTLDMGRIGIASQALGIAQTALD
230 240 250 260 270 280
360 370 380 390 400 410
pF1KB5 KAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGATDFQIEAAI
::..: :: :: . .. .:: ::: :. : . . .: . .. : :::.
CCDS92 CAVNYAENRMAFGAPLTKLQVIQFKLADMA-LALESARLLTWRAAMLKDNKKPFIKEAAM
290 300 310 320 330 340
420 430 440 450 460 470
pF1KB5 SKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVALQGC
.:. .:::: .. . :::.::::.. : .:: :: :: .:.:::..: :: .:
CCDS92 AKLAASEAATAISHQAIQILGGMGYVTEMPAERHYRDARITEIYEGTSEIQRLVIAGHLL
350 360 370 380 390 400
480 490 500 510 520 530
pF1KB5 MDKGKELSGLGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLVHPELSRSGELAV
CCDS92 RSYRS
410
>>CCDS53930.1 IVD gene_id:3712|Hs108|chr15 (396 aa)
initn: 708 init1: 261 opt: 712 Z-score: 834.1 bits: 163.9 E(32554): 3.9e-40
Smith-Waterman score: 712; 33.8% identity (68.5% similar) in 355 aa overlap (118-472:39-387)
90 100 110 120 130 140
pF1KB5 FPYPSVLNEEQTQFLKELVEPVSRFFEEVNDPAKNDALEMVEETTWQGLKELGAFGLQVP
: : : : .. :. : .::..:. .:
CCDS53 RLLGWRVASWRLRPPLAGFVSQRAHSLLPVDDAINGLSEEQRQEFWKQLGNLGVLGITAP
10 20 30 40 50 60
150 160 170 180 190 200
pF1KB5 SELGGVGLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLAS
. :: :: ... ..: .. . .::.. :::... .. .. :..:::::::::: :
CCDS53 VQYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLIS
70 80 90 100 110 120
210 220 230 240 250 260
pF1KB5 GETVAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPV
:: ..:. ..::..:::..:.. .: . :..: :::.:.::.:: ::.. :.:::
CCDS53 GEYIGALAMSEPNAGSDVVSMKLKAEKK--GNHYILNGNKFWITNGPDADVLIVYAKT--
130 140 150 160 170 180
270 280 290 300 310 320
pF1KB5 TDPATGAVKEKITAFVVERGFGGITHGPPEKKMGIKASNTAEVFFDGVRVPSENVLGEVG
: :. ... ::::.::.:. :.. . :.:...::: :..:. ..:. :.::. .
CCDS53 -DLAAVPASRGITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGHEN
190 200 210 220 230 240
330 340 350 360 370 380
pF1KB5 SGFKVAMHILNNGRFGMAAALAGTMRGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMV
.: : : :. :. .:.. : :.... ... . : ::.:: .: :.: :.: :
CCDS53 KGVYVLMSGLDLERLVLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMY
250 260 270 280 290 300
390 400 410 420 430 440
pF1KB5 MLQYVTESMAYMVSANMDQGATDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPG
.. ....: :. :.: . :.. ....: : .:. . :: .:: :....
CCDS53 TRLMACRQYVYNVAKACDEGHCTAKDCAGVI-LYSAECATQVALDGIQCFGGNGYINDFP
310 320 330 340 350 360
450 460 470 480 490 500
pF1KB5 VERVLRDLRIFRIFEGTNDILRLFVALQGCMDKGKELSGLGSALKNPFGNAGLLLGEAGK
. : ::: ....: ::... :: .
CCDS53 MGRFLRDAKLYEIGAGTSEVRRLVIGRAFNADFH
370 380 390
>>CCDS7634.1 ACADSB gene_id:36|Hs108|chr10 (432 aa)
initn: 644 init1: 281 opt: 710 Z-score: 831.1 bits: 163.5 E(32554): 5.7e-40
Smith-Waterman score: 710; 34.3% identity (67.0% similar) in 361 aa overlap (109-467:68-419)
80 90 100 110 120 130
pF1KB5 KGQLTTDQVFPYPSVLNEEQTQFLKELVEPVSRFFEEVNDP--AKNDALEMVEETTWQGL
:..: .: : . : .:... :::
CCDS76 SEALLNITNNGIHFAPLQTFTDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGL
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB5 KELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGTKA
. : .:..: : ::.: . . ..: .. : .:.. .... : ::.
CCDS76 FQQGLMGIEVDPEYGGTGASFLSTVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTEE
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB5 QKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTLNGSKLWISNGGLA
:: :::.:.. : :..:::.: ..:::. ...: : . : ::.:::::.:::.. :
CCDS76 QKATYLPQLTT-EKVGSFCLSEAGAGSDSFALKTRA--DKEGDYYVLNGSKMWISSAEHA
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB5 DIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGPPEKKMGIKASNTAEVFFDGVR
.: :.:.. ::. : . ::.:.:.: :. : ::.:.:..::.: . :..:.
CCDS76 GLFLVMANV---DPTIG--YKGITSFLVDRDTPGLHIGKPENKLGLRASSTCPLTFENVK
220 230 240 250 260
320 330 340 350 360 370
pF1KB5 VPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGIIAKAVDHATNRTQFGEKIHNF
:: :.::..: :.: :. ::.::.:.:: . : .: . .. . .: :::... .:
CCDS76 VPEANILGQIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKRLFDF
270 280 290 300 310 320
380 390 400 410 420 430
pF1KB5 GLIQEKLARMVMLQYVTESMAYMVSANMDQGATDFQIEAAISKIFGSEAAWKVTDECIQI
.:...:... ... ..: .. .. : : ::...: ..:: : ..:..::.
CCDS76 QGLQHQVAHVATQLEAARLLTYNAARLLEAGKP-FIKEASMAKYYASEIAGQTTSKCIEW
330 340 350 360 370 380
440 450 460 470 480 490
pF1KB5 MGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVALQGCMDKGKELSGLGSALKNPFG
:::.:. :. ::. .:: .: :.::...:
CCDS76 MGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQLNTIAKHIDAEY
390 400 410 420 430
500 510 520 530 540 550
pF1KB5 NAGLLLGEAGKQLRRRAGLGSGLSLSGLVHPELSRSGELAVRALEQFATVVEAKLIKHKK
>>CCDS81518.1 ACADSB gene_id:36|Hs108|chr10 (330 aa)
initn: 585 init1: 281 opt: 674 Z-score: 790.8 bits: 155.6 E(32554): 1e-37
Smith-Waterman score: 674; 35.1% identity (68.3% similar) in 325 aa overlap (143-467:2-317)
120 130 140 150 160 170
pF1KB5 FEEVNDPAKNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDL
:..: : ::.: . . ..: .. :
CCDS81 MGIEVDPEYGGTGASFLSTVLVIEELAKVDA
10 20 30
180 190 200 210 220 230
pF1KB5 GVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSA
.:.. .... : ::. :: :::.:.. : :..:::.: ..:::. ...: :
CCDS81 SVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTT-EKVGSFCLSEAGAGSDSFALKTRA
40 50 60 70 80 90
240 250 260 270 280 290
pF1KB5 VPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGIT
. : ::.:::::.:::.. : .: :.:.. ::. : . ::.:.:.: :.
CCDS81 --DKEGDYYVLNGSKMWISSAEHAGLFLVMANV---DPTIG--YKGITSFLVDRDTPGLH
100 110 120 130 140
300 310 320 330 340 350
pF1KB5 HGPPEKKMGIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTM
: ::.:.:..::.: . :..:.:: :.::..: :.: :. ::.::.:.:: . :
CCDS81 IGKPENKLGLRASSTCPLTFENVKVPEANILGQIGHGYKYAIGSLNEGRIGIAAQMLGLA
150 160 170 180 190 200
360 370 380 390 400 410
pF1KB5 RGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGATDFQ
.: . .. . .: :::... .: .:...:... ... ..: .. .. : :
CCDS81 QGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLLEAGKP-FI
210 220 230 240 250 260
420 430 440 450 460 470
pF1KB5 IEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFV
::...: ..:: : ..:..::. :::.:. :. ::. .:: .: :.::...:
CCDS81 KEASMAKYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQLNTI
270 280 290 300 310 320
480 490 500 510 520 530
pF1KB5 ALQGCMDKGKELSGLGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLVHPELSRS
CCDS81 AKHIDAEY
330
>>CCDS65562.1 ACADM gene_id:34|Hs108|chr1 (385 aa)
initn: 445 init1: 213 opt: 633 Z-score: 741.7 bits: 146.8 E(32554): 5.4e-35
Smith-Waterman score: 637; 33.3% identity (64.8% similar) in 384 aa overlap (100-482:18-384)
70 80 90 100 110 120
pF1KB5 SKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVSRFFEEVNDPAKNDALEMVE
.: .: . ::. ...... . ...
CCDS65 MLQEFTEQQKEFQATARKFAREEIIPVAAEYDKTGE----YPVPLIR
10 20 30 40
130 140 150 160 170 180
pF1KB5 ETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGI
.. : ::: .. ..: . ::.:: . . . : ... :: .. .. :.: :
CCDS65 RA-W----ELGLMNTHIPENCGGLGLGTFDACLISEELAYGCTGVQTAIEGN-SLGQMPI
50 60 70 80 90
190 200 210 220 230 240
pF1KB5 LLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTLNGSKLW
.. :. ::.::: ... . :.:.:::..:::.:.:.:.: . : : .::.:.:
CCDS65 IIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKK--GDEYIINGQKMW
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB5 ISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGPPEKKMGIKASNTAE
:.::: :. . ..:.. :: . : : .:.:.:: :: : : .:: . :.:
CCDS65 ITNGGKANWYFLLARSD-PDPKAPANKA-FTGFIVEADTPGIQIGRKELNMGQRCSDTRG
160 170 180 190 200 210
310 320 330 340 350 360
pF1KB5 VFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGIIAKAVDHATNRTQF
. :. :.::.:::: :.:::::: ... : .::. .: . . .:. .: .: :
CCDS65 IVFEDVKVPKENVLIGDGAGFKVAMGAFDKTRPVVAAGAVGLAQRALDEATKYALERKTF
220 230 240 250 260 270
370 380 390 400 410 420
pF1KB5 GEKIHNFGLIQEKLARMVMLQYVTESMAYMVSA-NMDQGATDFQIEAAISKIFGSEAAWK
:. . . :. ::.:.: . :.:. .: ..:.: . :.:.: :... : .
CCDS65 GKLLVEHQAISFMLAEMAM-KVELARMSYQRAAWEVDSGRRNTYY-ASIAKAFAGDIANQ
280 290 300 310 320 330
430 440 450 460 470 480
pF1KB5 VTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVALQGCMDKGKELSGLG
.. . .::.:: :: : ::...:: .:..:.:::..: ::.:: . .:: :
CCDS65 LATDAVQILGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIVAREH-IDKYKN
340 350 360 370 380
490 500 510 520 530 540
pF1KB5 SALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLVHPELSRSGELAVRALEQFATVVE
655 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 07:16:20 2016 done: Sat Nov 5 07:16:21 2016
Total Scan time: 3.690 Total Display time: 0.130
Function used was FASTA [36.3.4 Apr, 2011]