Result of FASTA (omim) for
pF1KB5455
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5455, 375 aa
1>>>pF1KB5455 375 - 375 aa - 375 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2723+/-0.000453; mu= 16.8488+/- 0.028
mean_var=63.8280+/-12.807, 0's: 0 Z-trim(110.4): 40 B-trim: 505 in 1/48
Lambda= 0.160535
statistics sampled from 18690 (18727) to 18690 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.582), E-opt: 0.2 (0.22), width: 16
Scan time: 6.950
The best scores are: opt bits E(85289)
NP_001092 (OMIM: 102630,243310,607371,608578) acti ( 375) 2497 587.3 1.9e-167
NP_001186883 (OMIM: 102560,604717,614583) actin, c ( 375) 2478 582.9 4.1e-166
NP_001605 (OMIM: 102560,604717,614583) actin, cyto ( 375) 2478 582.9 4.1e-166
NP_001135417 (OMIM: 102620,611788,613834,614042) a ( 377) 2382 560.7 2e-159
NP_001604 (OMIM: 102620,611788,613834,614042) acti ( 377) 2382 560.7 2e-159
NP_001307784 (OMIM: 102620,611788,613834,614042) a ( 377) 2382 560.7 2e-159
NP_005150 (OMIM: 102540,612098,612794,613424) acti ( 377) 2373 558.6 8.6e-159
NP_001606 (OMIM: 102545) actin, gamma-enteric smoo ( 376) 2370 557.9 1.4e-158
NP_001091 (OMIM: 102610,161800,255310,616852) acti ( 377) 2368 557.4 1.9e-158
NP_001017992 (OMIM: 614835) beta-actin-like protei ( 376) 2346 552.3 6.5e-157
XP_016859649 (OMIM: 608914) PREDICTED: POTE ankyri ( 657) 2322 546.9 4.9e-155
XP_011509518 (OMIM: 608914) PREDICTED: POTE ankyri ( 957) 2322 547.0 6.8e-155
XP_016859648 (OMIM: 608914) PREDICTED: POTE ankyri ( 967) 2322 547.0 6.8e-155
NP_001077007 (OMIM: 608914) POTE ankyrin domain fa (1075) 2322 547.0 7.5e-155
XP_016859650 (OMIM: 608914) PREDICTED: POTE ankyri (1075) 2322 547.0 7.5e-155
NP_001186822 (OMIM: 102545) actin, gamma-enteric s ( 333) 1840 435.1 1.1e-121
NP_005726 (OMIM: 605144) beta-centractin [Homo sap ( 376) 1448 344.3 2.6e-94
NP_005727 (OMIM: 605143) alpha-centractin [Homo sa ( 376) 1426 339.2 9e-93
NP_115876 (OMIM: 608534) actin-related protein T3 ( 372) 1323 315.4 1.4e-85
XP_016858605 (OMIM: 605144) PREDICTED: beta-centra ( 332) 1287 307.0 4e-83
NP_612146 (OMIM: 300487) actin-related protein T1 ( 376) 1268 302.7 9.4e-82
NP_536356 (OMIM: 608535) actin-related protein T2 ( 377) 1241 296.4 7.2e-80
XP_005263911 (OMIM: 605144) PREDICTED: beta-centra ( 302) 1195 285.7 9.6e-77
NP_006678 (OMIM: 604303) actin-like protein 7A [Ho ( 435) 1127 270.0 7.2e-72
NP_005713 (OMIM: 604221) actin-related protein 2 i ( 394) 1113 266.8 6.2e-71
NP_001005386 (OMIM: 604221) actin-related protein ( 399) 1099 263.5 6e-70
NP_006677 (OMIM: 604304) actin-like protein 7B [Ho ( 415) 1092 261.9 1.9e-69
NP_005712 (OMIM: 604222) actin-related protein 3 i ( 418) 590 145.7 1.9e-34
NP_001264069 (OMIM: 604222) actin-related protein ( 367) 511 127.3 5.5e-29
NP_057272 (OMIM: 612458) actin-like protein 6B [Ho ( 426) 452 113.7 8.1e-25
NP_817126 (OMIM: 604958) actin-like protein 6A iso ( 387) 361 92.6 1.7e-18
NP_829888 (OMIM: 604958) actin-like protein 6A iso ( 387) 361 92.6 1.7e-18
NP_004292 (OMIM: 604958) actin-like protein 6A iso ( 429) 361 92.6 1.8e-18
>>NP_001092 (OMIM: 102630,243310,607371,608578) actin, c (375 aa)
initn: 2497 init1: 2497 opt: 2497 Z-score: 3127.1 bits: 587.3 E(85289): 1.9e-167
Smith-Waterman score: 2497; 100.0% identity (100.0% similar) in 375 aa overlap (1-375:1-375)
10 20 30 40 50 60
pF1KB5 MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
310 320 330 340 350 360
370
pF1KB5 EYDESGPSIVHRKCF
:::::::::::::::
NP_001 EYDESGPSIVHRKCF
370
>>NP_001186883 (OMIM: 102560,604717,614583) actin, cytop (375 aa)
initn: 2478 init1: 2478 opt: 2478 Z-score: 3103.3 bits: 582.9 E(85289): 4.1e-166
Smith-Waterman score: 2478; 98.9% identity (100.0% similar) in 375 aa overlap (1-375:1-375)
10 20 30 40 50 60
pF1KB5 MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
:...:::::.::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
310 320 330 340 350 360
370
pF1KB5 EYDESGPSIVHRKCF
:::::::::::::::
NP_001 EYDESGPSIVHRKCF
370
>>NP_001605 (OMIM: 102560,604717,614583) actin, cytoplas (375 aa)
initn: 2478 init1: 2478 opt: 2478 Z-score: 3103.3 bits: 582.9 E(85289): 4.1e-166
Smith-Waterman score: 2478; 98.9% identity (100.0% similar) in 375 aa overlap (1-375:1-375)
10 20 30 40 50 60
pF1KB5 MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
:...:::::.::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
310 320 330 340 350 360
370
pF1KB5 EYDESGPSIVHRKCF
:::::::::::::::
NP_001 EYDESGPSIVHRKCF
370
>>NP_001135417 (OMIM: 102620,611788,613834,614042) actin (377 aa)
initn: 2382 init1: 2382 opt: 2382 Z-score: 2983.1 bits: 560.7 E(85289): 2e-159
Smith-Waterman score: 2382; 94.1% identity (99.2% similar) in 374 aa overlap (2-375:4-377)
10 20 30 40 50
pF1KB5 MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
..: .::: :::::.::::::::::::::::::::::::::::::::::::::::::
NP_001 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
:::::::::::::::::.::::::::::::.:::::::::::::.:::::::::::::::
NP_001 QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRL
::::::::::.:::::::::::::::::::::::.::::::::.:::::::::::::.::
NP_001 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB5 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK
::::::::::::::::::::::.:::::::::::::::::::::::.:::::::::::::
NP_001 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB5 SYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTV
:::::::::::::::::::::.::::::.:::: ::::::.:::::::.:::::::::.:
NP_001 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB5 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
310 320 330 340 350 360
360 370
pF1KB5 KQEYDESGPSIVHRKCF
::::::.::::::::::
NP_001 KQEYDEAGPSIVHRKCF
370
>>NP_001604 (OMIM: 102620,611788,613834,614042) actin, a (377 aa)
initn: 2382 init1: 2382 opt: 2382 Z-score: 2983.1 bits: 560.7 E(85289): 2e-159
Smith-Waterman score: 2382; 94.1% identity (99.2% similar) in 374 aa overlap (2-375:4-377)
10 20 30 40 50
pF1KB5 MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
..: .::: :::::.::::::::::::::::::::::::::::::::::::::::::
NP_001 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
:::::::::::::::::.::::::::::::.:::::::::::::.:::::::::::::::
NP_001 QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRL
::::::::::.:::::::::::::::::::::::.::::::::.:::::::::::::.::
NP_001 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB5 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK
::::::::::::::::::::::.:::::::::::::::::::::::.:::::::::::::
NP_001 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB5 SYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTV
:::::::::::::::::::::.::::::.:::: ::::::.:::::::.:::::::::.:
NP_001 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB5 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
310 320 330 340 350 360
360 370
pF1KB5 KQEYDESGPSIVHRKCF
::::::.::::::::::
NP_001 KQEYDEAGPSIVHRKCF
370
>>NP_001307784 (OMIM: 102620,611788,613834,614042) actin (377 aa)
initn: 2382 init1: 2382 opt: 2382 Z-score: 2983.1 bits: 560.7 E(85289): 2e-159
Smith-Waterman score: 2382; 94.1% identity (99.2% similar) in 374 aa overlap (2-375:4-377)
10 20 30 40 50
pF1KB5 MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
..: .::: :::::.::::::::::::::::::::::::::::::::::::::::::
NP_001 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
:::::::::::::::::.::::::::::::.:::::::::::::.:::::::::::::::
NP_001 QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRL
::::::::::.:::::::::::::::::::::::.::::::::.:::::::::::::.::
NP_001 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB5 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK
::::::::::::::::::::::.:::::::::::::::::::::::.:::::::::::::
NP_001 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB5 SYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTV
:::::::::::::::::::::.::::::.:::: ::::::.:::::::.:::::::::.:
NP_001 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB5 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
310 320 330 340 350 360
360 370
pF1KB5 KQEYDESGPSIVHRKCF
::::::.::::::::::
NP_001 KQEYDEAGPSIVHRKCF
370
>>NP_005150 (OMIM: 102540,612098,612794,613424) actin, a (377 aa)
initn: 2373 init1: 2373 opt: 2373 Z-score: 2971.8 bits: 558.6 E(85289): 8.6e-159
Smith-Waterman score: 2373; 94.1% identity (98.9% similar) in 374 aa overlap (2-375:4-377)
10 20 30 40 50
pF1KB5 MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
:.. .::: :::::. :::::::::::::::::::::::::::::::::::::::::
NP_005 MCDDEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
:::::::::::::::::.::::::::::::::::::::::::::.:::::::::::::::
NP_005 QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRL
::::::::::.:::::::::::::::::::::::.::::::::.:::::::::::::.::
NP_005 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB5 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK
::::::::::::::::::::::.:::::::::::::::::::::::.:::::::::::::
NP_005 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB5 SYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTV
:::::::::::::::::::::.::::::.:::: ::::::.:::::::.:::::::::.:
NP_005 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB5 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
310 320 330 340 350 360
360 370
pF1KB5 KQEYDESGPSIVHRKCF
::::::.::::::::::
NP_005 KQEYDEAGPSIVHRKCF
370
>>NP_001606 (OMIM: 102545) actin, gamma-enteric smooth m (376 aa)
initn: 2370 init1: 2370 opt: 2370 Z-score: 2968.1 bits: 557.9 E(85289): 1.4e-158
Smith-Waterman score: 2370; 93.6% identity (98.9% similar) in 374 aa overlap (2-375:3-376)
10 20 30 40 50
pF1KB5 MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
... .::: :::::.:::::::::::::::::::::::::::::::::::::::::::
NP_001 MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
::::::::::::::::.::::::::::::.:::::::::::::.::::::::::::::::
NP_001 SKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKM
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD
:::::::::.:::::::::::::::::::::::.::::::::.:::::::::::::.:::
NP_001 TQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLD
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB5 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS
:::::::::::::::::::::.:::::::::::::::::::::::.::::::::::::::
NP_001 LAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKS
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB5 YELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVL
::::::::::::::::::::.::::::.:::: ::::::.:::::::.:::::::::.::
NP_001 YELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVL
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB5 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
310 320 330 340 350 360
360 370
pF1KB5 QEYDESGPSIVHRKCF
::::.::::::::::
NP_001 PEYDEAGPSIVHRKCF
370
>>NP_001091 (OMIM: 102610,161800,255310,616852) actin, a (377 aa)
initn: 2368 init1: 2368 opt: 2368 Z-score: 2965.6 bits: 557.4 E(85289): 1.9e-158
Smith-Waterman score: 2368; 93.6% identity (98.9% similar) in 374 aa overlap (2-375:4-377)
10 20 30 40 50
pF1KB5 MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
.:. .::: :::::. :::::::::::::::::::::::::::::::::::::::::
NP_001 MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
:::::::::::::::::.::::::::::::::::::::::::::.:::::::::::::::
NP_001 QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRL
::::::::::.:::::::::::::::::::::::.::::::::.:::::::::::::.::
NP_001 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB5 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK
::::::::::::::::::::::.:::::::::::::::::::::::.:::::::::::::
NP_001 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB5 SYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTV
:::::::::::::::::::::.::::::.:::: ::::::.:::::::.:::::::::.:
NP_001 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB5 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
NP_001 MSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIT
310 320 330 340 350 360
360 370
pF1KB5 KQEYDESGPSIVHRKCF
::::::.::::::::::
NP_001 KQEYDEAGPSIVHRKCF
370
>>NP_001017992 (OMIM: 614835) beta-actin-like protein 2 (376 aa)
initn: 2346 init1: 2346 opt: 2346 Z-score: 2938.0 bits: 552.3 E(85289): 6.5e-157
Smith-Waterman score: 2346; 91.7% identity (97.9% similar) in 374 aa overlap (2-375:3-376)
10 20 30 40 50
pF1KB5 MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
:....:::::::::::::::.:::::::::::..:::::::::::::::: :::::::
NP_001 MTDNELSALVVDNGSGMCKAGFGGDDAPRAVFPSMIGRPRHQGVMVGMGQKDCYVGDEAQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
::::.::::::::::.:::::::::::.:::::::::::.:::.:::::::::: :::::
NP_001 SKRGVLTLKYPIEHGVVTNWDDMEKIWYHTFYNELRVAPDEHPILLTEAPLNPKINREKM
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD
::::::.::::::::::::::::::::::::::::::::::: :::::::::::::::::
NP_001 TQIMFEAFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHIVPIYEGYALPHAILRLD
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB5 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS
:::::::::::::::::::.::::::::::::.:::::::::::::::. ::.::: :.:
NP_001 LAGRDLTDYLMKILTERGYNFTTTAEREIVRDVKEKLCYVALDFEQEMVRAAASSSPERS
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB5 YELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVL
:::::::::::::::::::::.:::::::.:: :::::::::::::::::::::::::::
NP_001 YELPDGQVITIGNERFRCPEAIFQPSFLGIESSGIHETTFNSIMKCDVDIRKDLYANTVL
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB5 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
:::.:::::::::::::: .::::::::::::::::::::::::::::::::::::::::
NP_001 SGGSTMYPGIADRMQKEIITLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
310 320 330 340 350 360
360 370
pF1KB5 QEYDESGPSIVHRKCF
:::::.:: :::::::
NP_001 QEYDEAGPPIVHRKCF
370
375 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 17:25:14 2016 done: Thu Nov 3 17:25:15 2016
Total Scan time: 6.950 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]