Result of FASTA (omim) for
pF1KB5477
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5477, 391 aa
1>>>pF1KB5477 391 - 391 aa - 391 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.2056+/-0.000368; mu= 5.6816+/- 0.023
mean_var=330.7506+/-79.312, 0's: 0 Z-trim(121.6): 147 B-trim: 2126 in 1/54
Lambda= 0.070522
statistics sampled from 38152 (38403) to 38152 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.78), E-opt: 0.2 (0.45), width: 16
Scan time: 9.380
The best scores are: opt bits E(85289)
NP_006259 (OMIM: 601671) zinc finger protein ubi-d ( 391) 2773 295.8 1.2e-79
XP_016873591 (OMIM: 601671) PREDICTED: zinc finger ( 371) 2651 283.3 6.3e-76
NP_001317237 (OMIM: 601671) zinc finger protein ub ( 405) 1454 161.6 3.1e-39
XP_016873590 (OMIM: 601671) PREDICTED: zinc finger ( 385) 1332 149.2 1.6e-35
XP_005259347 (OMIM: 601670) PREDICTED: zinc finger ( 388) 1285 144.4 4.5e-34
XP_006723471 (OMIM: 601670) PREDICTED: zinc finger ( 396) 1273 143.2 1.1e-33
NP_001128627 (OMIM: 601670) zinc finger protein ne ( 414) 1265 142.4 1.9e-33
NP_001267471 (OMIM: 601672) zinc finger protein DP ( 378) 1191 134.8 3.3e-31
XP_016877159 (OMIM: 601672) PREDICTED: zinc finger ( 378) 1191 134.8 3.3e-31
XP_005259349 (OMIM: 601670) PREDICTED: zinc finger ( 369) 1156 131.2 3.9e-30
XP_005259346 (OMIM: 601670) PREDICTED: zinc finger ( 397) 1154 131.1 4.7e-30
NP_001128628 (OMIM: 601670) zinc finger protein ne ( 332) 992 114.5 3.8e-25
XP_006723470 (OMIM: 601670) PREDICTED: zinc finger ( 398) 968 112.1 2.3e-24
NP_001276907 (OMIM: 601670) zinc finger protein ne ( 424) 948 110.1 9.9e-24
XP_016877161 (OMIM: 601672) PREDICTED: zinc finger ( 354) 881 103.2 1e-21
XP_011525658 (OMIM: 601670) PREDICTED: zinc finger ( 407) 780 93.0 1.3e-18
XP_016877163 (OMIM: 601672) PREDICTED: zinc finger ( 301) 665 81.1 3.8e-15
XP_016877162 (OMIM: 601672) PREDICTED: zinc finger ( 347) 665 81.2 4.1e-15
NP_036206 (OMIM: 601672) zinc finger protein DPF3 ( 357) 665 81.2 4.1e-15
XP_016877160 (OMIM: 601672) PREDICTED: zinc finger ( 367) 665 81.3 4.2e-15
NP_001267472 (OMIM: 601672) zinc finger protein DP ( 367) 665 81.3 4.2e-15
NP_001267473 (OMIM: 601672) zinc finger protein DP ( 412) 665 81.3 4.5e-15
XP_016877164 (OMIM: 601672) PREDICTED: zinc finger ( 249) 628 77.3 4.6e-14
XP_011525659 (OMIM: 601670) PREDICTED: zinc finger ( 379) 559 70.5 7.6e-12
NP_004638 (OMIM: 601670) zinc finger protein neuro ( 380) 529 67.4 6.3e-11
XP_016871498 (OMIM: 603736,605880,606170) PREDICTE (1727) 508 66.2 6.6e-10
XP_016871495 (OMIM: 603736,605880,606170) PREDICTE (1781) 508 66.3 6.8e-10
XP_016871496 (OMIM: 603736,605880,606170) PREDICTE (1781) 508 66.3 6.8e-10
NP_001243398 (OMIM: 603736,605880,606170) histone (1781) 508 66.3 6.8e-10
XP_016871497 (OMIM: 603736,605880,606170) PREDICTE (1781) 508 66.3 6.8e-10
XP_016871494 (OMIM: 603736,605880,606170) PREDICTE (1890) 508 66.3 7e-10
NP_001243397 (OMIM: 603736,605880,606170) histone (1890) 508 66.3 7e-10
XP_016871493 (OMIM: 603736,605880,606170) PREDICTE (2019) 508 66.3 7.3e-10
NP_036462 (OMIM: 603736,605880,606170) histone ace (2073) 508 66.3 7.4e-10
XP_005269721 (OMIM: 603736,605880,606170) PREDICTE (2073) 508 66.3 7.4e-10
XP_016871491 (OMIM: 603736,605880,606170) PREDICTE (2073) 508 66.3 7.4e-10
XP_016871492 (OMIM: 603736,605880,606170) PREDICTE (2073) 508 66.3 7.4e-10
XP_016871490 (OMIM: 603736,605880,606170) PREDICTE (2073) 508 66.3 7.4e-10
XP_016871489 (OMIM: 603736,605880,606170) PREDICTE (2073) 508 66.3 7.4e-10
NP_001292807 (OMIM: 601408,616268) histone acetylt ( 815) 489 63.8 1.6e-09
NP_006757 (OMIM: 601408,616268) histone acetyltran (2004) 489 64.4 2.8e-09
XP_016869353 (OMIM: 601408,616268) PREDICTED: hist (2004) 489 64.4 2.8e-09
XP_016869352 (OMIM: 601408,616268) PREDICTED: hist (2004) 489 64.4 2.8e-09
XP_011542961 (OMIM: 601408,616268) PREDICTED: hist (2041) 489 64.4 2.8e-09
XP_011542959 (OMIM: 601408,616268) PREDICTED: hist (2048) 489 64.4 2.8e-09
XP_011542958 (OMIM: 601408,616268) PREDICTED: hist (2048) 489 64.4 2.8e-09
XP_011542960 (OMIM: 601408,616268) PREDICTED: hist (2048) 489 64.4 2.8e-09
XP_006723472 (OMIM: 601670) PREDICTED: zinc finger ( 242) 467 60.9 3.8e-09
XP_006723473 (OMIM: 601670) PREDICTED: zinc finger ( 242) 467 60.9 3.8e-09
XP_016866487 (OMIM: 613069) PREDICTED: PHD finger ( 446) 445 59.0 2.6e-08
>>NP_006259 (OMIM: 601671) zinc finger protein ubi-d4 is (391 aa)
initn: 2773 init1: 2773 opt: 2773 Z-score: 1550.9 bits: 295.8 E(85289): 1.2e-79
Smith-Waterman score: 2773; 100.0% identity (100.0% similar) in 391 aa overlap (1-391:1-391)
10 20 30 40 50 60
pF1KB5 MAAVVENVVKLLGEQYYKDAMEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MAAVVENVVKLLGEQYYKDAMEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 HRGPGLASGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 HRGPGLASGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 ALLRTDPLEKRGAPDPRVDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTPKRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 ALLRTDPLEKRGAPDPRVDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTPKRR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 GKGKSKGKGVGSARKKLDASILEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEGED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 GKGKSKGKGVGSARKKLDASILEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEGED
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 KEDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSKINKKTGQPEELVSCSDCGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 KEDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSKINKKTGQPEELVSCSDCGR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 SGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLTPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 SGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLTPS
310 320 330 340 350 360
370 380 390
pF1KB5 MSEPPEGSWSCHLCLDLLKEKASIYQNQNSS
:::::::::::::::::::::::::::::::
NP_006 MSEPPEGSWSCHLCLDLLKEKASIYQNQNSS
370 380 390
>>XP_016873591 (OMIM: 601671) PREDICTED: zinc finger pro (371 aa)
initn: 2651 init1: 2651 opt: 2651 Z-score: 1484.1 bits: 283.3 E(85289): 6.3e-76
Smith-Waterman score: 2651; 100.0% identity (100.0% similar) in 371 aa overlap (21-391:1-371)
10 20 30 40 50 60
pF1KB5 MAAVVENVVKLLGEQYYKDAMEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR
::::::::::::::::::::::::::::::::::::::::
XP_016 MEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR
10 20 30 40
70 80 90 100 110 120
pF1KB5 HRGPGLASGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HRGPGLASGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLE
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB5 ALLRTDPLEKRGAPDPRVDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTPKRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALLRTDPLEKRGAPDPRVDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTPKRR
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB5 GKGKSKGKGVGSARKKLDASILEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEGED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GKGKSKGKGVGSARKKLDASILEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEGED
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB5 KEDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSKINKKTGQPEELVSCSDCGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KEDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSKINKKTGQPEELVSCSDCGR
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB5 SGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLTPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLTPS
290 300 310 320 330 340
370 380 390
pF1KB5 MSEPPEGSWSCHLCLDLLKEKASIYQNQNSS
:::::::::::::::::::::::::::::::
XP_016 MSEPPEGSWSCHLCLDLLKEKASIYQNQNSS
350 360 370
>>NP_001317237 (OMIM: 601671) zinc finger protein ubi-d4 (405 aa)
initn: 2758 init1: 1454 opt: 1454 Z-score: 825.5 bits: 161.6 E(85289): 3.1e-39
Smith-Waterman score: 2734; 96.3% identity (96.5% similar) in 405 aa overlap (1-391:1-405)
10 20 30 40 50 60
pF1KB5 MAAVVENVVKLLGEQYYKDAMEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAAVVENVVKLLGEQYYKDAMEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 HRGPGLASGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HRGPGLASGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 ALLRTDPLEKRGAPDPRVDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTPKRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALLRTDPLEKRGAPDPRVDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTPKRR
130 140 150 160 170 180
190 200 210 220
pF1KB5 GKGKSKGKGVGSARKKLDASILEDRDKPYACD--------------ICGKRYKNRPGLSY
:::::::::::::::::::::::::::::::: .:::::::::::::
NP_001 GKGKSKGKGVGSARKKLDASILEDRDKPYACDNSFKQKHTSKAPQRVCGKRYKNRPGLSY
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB5 HYAHSHLAEEEGEDKEDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSKINKKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HYAHSHLAEEEGEDKEDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSKINKKT
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB5 GQPEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GQPEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCD
310 320 330 340 350 360
350 360 370 380 390
pF1KB5 DCDRGYHMYCLTPSMSEPPEGSWSCHLCLDLLKEKASIYQNQNSS
:::::::::::::::::::::::::::::::::::::::::::::
NP_001 DCDRGYHMYCLTPSMSEPPEGSWSCHLCLDLLKEKASIYQNQNSS
370 380 390 400
>>XP_016873590 (OMIM: 601671) PREDICTED: zinc finger pro (385 aa)
initn: 2636 init1: 1332 opt: 1332 Z-score: 758.6 bits: 149.2 E(85289): 1.6e-35
Smith-Waterman score: 2612; 96.1% identity (96.4% similar) in 385 aa overlap (21-391:1-385)
10 20 30 40 50 60
pF1KB5 MAAVVENVVKLLGEQYYKDAMEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR
::::::::::::::::::::::::::::::::::::::::
XP_016 MEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR
10 20 30 40
70 80 90 100 110 120
pF1KB5 HRGPGLASGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HRGPGLASGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLE
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB5 ALLRTDPLEKRGAPDPRVDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTPKRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALLRTDPLEKRGAPDPRVDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTPKRR
110 120 130 140 150 160
190 200 210 220
pF1KB5 GKGKSKGKGVGSARKKLDASILEDRDKPYACD--------------ICGKRYKNRPGLSY
:::::::::::::::::::::::::::::::: .:::::::::::::
XP_016 GKGKSKGKGVGSARKKLDASILEDRDKPYACDNSFKQKHTSKAPQRVCGKRYKNRPGLSY
170 180 190 200 210 220
230 240 250 260 270 280
pF1KB5 HYAHSHLAEEEGEDKEDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSKINKKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HYAHSHLAEEEGEDKEDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSKINKKT
230 240 250 260 270 280
290 300 310 320 330 340
pF1KB5 GQPEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GQPEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCD
290 300 310 320 330 340
350 360 370 380 390
pF1KB5 DCDRGYHMYCLTPSMSEPPEGSWSCHLCLDLLKEKASIYQNQNSS
:::::::::::::::::::::::::::::::::::::::::::::
XP_016 DCDRGYHMYCLTPSMSEPPEGSWSCHLCLDLLKEKASIYQNQNSS
350 360 370 380
>>XP_005259347 (OMIM: 601670) PREDICTED: zinc finger pro (388 aa)
initn: 1730 init1: 664 opt: 1285 Z-score: 732.8 bits: 144.4 E(85289): 4.5e-34
Smith-Waterman score: 1635; 60.0% identity (77.4% similar) in 402 aa overlap (1-385:1-384)
10 20 30 40 50 60
pF1KB5 MAAVVENVVKLLGEQYYKDAMEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR
::....: .: :::..:..:.:.:..::::::::::.:::::::::::::.::::::::
XP_005 MATAIQNPLKSLGEDFYREAIEHCRSYNARLCAERSLRLPFLDSQTGVAQNNCYIWMEKT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 HRGPGLASGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLE
::::::: ::.:.:::: :::::: . ::::: : : . ::::: . . : ::
XP_005 HRGPGLAPGQIYTYPARCWRKKRRLNILEDPRLRPCEYKIDCEAPLKKEGGLPE-GPVLE
70 80 90 100 110
130 140 150 160 170 180
pF1KB5 ALLRTDPLEKRGAPDPRVDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTPKRR
::: .. ::. .. : : . . ....:: : ::. :: :.: :.:.
XP_005 ALLCAETGEKK------IE---LKEEETIMDCQKQQLLE---FPHDLEVEDLEDDIPRRK
120 130 140 150 160
190 200 210 220 230 240
pF1KB5 GKGKSKGKGVGSARKKLDASILEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEGED
...:.:. :.:. ::. :.. ::::::::.::::::::::::::::::.:.::::::::.
XP_005 NRAKGKAYGIGGLRKRQDTASLEDRDKPYVCDICGKRYKNRPGLSYHYTHTHLAEEEGEE
170 180 190 200 210 220
250 260 270 280
pF1KB5 KEDSQP-P----------------TPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSKIN
. . . : .: .:: .. .::.::: ..::.::::::: ::
XP_005 NAERHALPFHRKNNHKQFYKELAWVPEAQR--KHTAKKAPDGTVIPNGYCDFCLGGSK--
230 240 250 260 270 280
290 300 310 320 330 340
pF1KB5 KKTGQPEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLL
::: ::.:.::.:::::::::::::: : :::.:::::::::: :..:::::::::::
XP_005 -KTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDDQLL
290 300 310 320 330 340
350 360 370 380 390
pF1KB5 FCDDCDRGYHMYCLTPSMSEPPEGSWSCHLCLDLLKEKASIYQNQNSS
::::::::::::::.: :.::::::::::::: :::::: :
XP_005 FCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLRHLKEKASAYITLT
350 360 370 380
>>XP_006723471 (OMIM: 601670) PREDICTED: zinc finger pro (396 aa)
initn: 897 init1: 526 opt: 1273 Z-score: 726.1 bits: 143.2 E(85289): 1.1e-33
Smith-Waterman score: 1596; 58.1% identity (74.0% similar) in 415 aa overlap (1-385:1-392)
10 20 30 40 50 60
pF1KB5 MAAVVENVVKLLGEQYYKDAMEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR
::....: .: :::..:..:.:.:..::::::::::.:::::::::::::.::::::::
XP_006 MATAIQNPLKSLGEDFYREAIEHCRSYNARLCAERSLRLPFLDSQTGVAQNNCYIWMEKT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 HRGPGLASGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLE
::::::: ::.:.:::: :::::: . ::::: : : . ::::: . . : ::
XP_006 HRGPGLAPGQIYTYPARCWRKKRRLNILEDPRLRPCEYKIDCEAPLKKEGGLPE-GPVLE
70 80 90 100 110
130 140 150 160 170
pF1KB5 ALLRTDPLEKR---GAPDPRVDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTP
::: .. ::. . .: ..: ::: ::. :: :.: :
XP_006 ALLCAETGEKKIELKEEETIMDCQQLLEFP-----------------HDLEVEDLEDDIP
120 130 140 150 160
180 190 200 210 220 230
pF1KB5 KRRGKGKSKGKGVGSARKKLDASILEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE
.:....:.:. :.:. ::. :.. ::::::::.::::::::::::::::::.:.::::::
XP_006 RRKNRAKGKAYGIGGLRKRQDTASLEDRDKPYVCDICGKRYKNRPGLSYHYTHTHLAEEE
170 180 190 200 210 220
240 250 260 270 280
pF1KB5 GEDKEDSQP-P----------------TPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDS
::.. . . : .: .:: .. .::.::: ..::.::::::: :
XP_006 GEENAERHALPFHRKNNHKQFYKELAWVPEAQR--KHTAKKAPDGTVIPNGYCDFCLGGS
230 240 250 260 270 280
290 300 310 320 330
pF1KB5 KINKKTGQPEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSEND-
: ::: ::.:.::.:::::::::::::: : :::.:::::::::: :..:::::::
XP_006 K---KTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDG
290 300 310 320 330
340 350 360 370 380 390
pF1KB5 ---------DQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLCLDLLKEKASIYQNQNS
::::::::::::::::::.: :.::::::::::::: :::::: :
XP_006 ASWAGLTPQDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLRHLKEKASAYITLT
340 350 360 370 380 390
pF1KB5 S
>>NP_001128627 (OMIM: 601670) zinc finger protein neuro- (414 aa)
initn: 1704 init1: 664 opt: 1265 Z-score: 721.5 bits: 142.4 E(85289): 1.9e-33
Smith-Waterman score: 1615; 59.7% identity (77.1% similar) in 402 aa overlap (1-385:28-410)
10 20 30
pF1KB5 MAAVVENVVKLLGEQYYKDAMEQCHNYNARLCA
::.:. . ..: ::..:..:.:.:..:::::::
NP_001 MGGLSARPTAGRTDPAGTCWGQDPGSKMATVIPGPLSL-GEDFYREAIEHCRSYNARLCA
10 20 30 40 50
40 50 60 70 80 90
pF1KB5 ERSVRLPFLDSQTGVAQSNCYIWMEKRHRGPGLASGQLYSYPARRWRKKRRAHPPEDPRL
:::.:::::::::::::.:::::::: ::::::: ::.:.:::: :::::: . :::::
NP_001 ERSLRLPFLDSQTGVAQNNCYIWMEKTHRGPGLAPGQIYTYPARCWRKKRRLNILEDPRL
60 70 80 90 100 110
100 110 120 130 140 150
pF1KB5 SFPSIKPDTDQTLKKEGLISQDGSSLEALLRTDPLEKRGAPDPRVDDDSLGEFPVTNSRA
: : . ::::: . . : ::::: .. ::. .. : : . .
NP_001 RPCEYKIDCEAPLKKEGGLPE-GPVLEALLCAETGEKK------IE---LKEEETIMDCQ
120 130 140 150 160
160 170 180 190 200 210
pF1KB5 RKRILEPDDFLDDLDDEDYEEDTPKRRGKGKSKGKGVGSARKKLDASILEDRDKPYACDI
....:: : ::. :: :.: :.:....:.:. :.:. ::. :.. ::::::::.:::
NP_001 KQQLLE---FPHDLEVEDLEDDIPRRKNRAKGKAYGIGGLRKRQDTASLEDRDKPYVCDI
170 180 190 200 210 220
220 230 240 250
pF1KB5 CGKRYKNRPGLSYHYAHSHLAEEEGEDKEDSQP-P----------------TPVSQRSEE
:::::::::::::::.:.::::::::.. . . : .: .:: .
NP_001 CGKRYKNRPGLSYHYTHTHLAEEEGEENAERHALPFHRKNNHKQFYKELAWVPEAQR--K
230 240 250 260 270 280
260 270 280 290 300 310
pF1KB5 QKSKKGPDGLALPNNYCDFCLGDSKINKKTGQPEELVSCSDCGRSGHPSCLQFTPVMMAA
. .::.::: ..::.::::::: :: ::: ::.:.::.:::::::::::::: : ::
NP_001 HTAKKAPDGTVIPNGYCDFCLGGSK---KTGCPEDLISCADCGRSGHPSCLQFTVNMTAA
290 300 310 320 330 340
320 330 340 350 360 370
pF1KB5 VKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLCLD
:.:::::::::: :..:::::::::::::::::::::::::.: :.:::::::::::::
NP_001 VRTYRWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLR
350 360 370 380 390 400
380 390
pF1KB5 LLKEKASIYQNQNSS
:::::: :
NP_001 HLKEKASAYITLT
410
>>NP_001267471 (OMIM: 601672) zinc finger protein DPF3 i (378 aa)
initn: 1867 init1: 1170 opt: 1191 Z-score: 681.2 bits: 134.8 E(85289): 3.3e-31
Smith-Waterman score: 1802; 63.0% identity (85.1% similar) in 389 aa overlap (1-388:1-377)
10 20 30 40 50 60
pF1KB5 MAAVVENVVKLLGEQYYKDAMEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR
::.:..: .: ::.:.::.:.:.:..::.:::::::::::::::::::::.:::::::::
NP_001 MATVIHNPLKALGDQFYKEAIEHCRSYNSRLCAERSVRLPFLDSQTGVAQNNCYIWMEKR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 HRGPGLASGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLE
::::::: ::::.:::: :::::: ::::::.: . :::... :::.:. :.. ..::
NP_001 HRGPGLAPGQLYTYPARCWRKKRRLHPPEDPKLRLLEIKPEVELPLKKDGFTSES-TTLE
70 80 90 100 110
130 140 150 160 170
pF1KB5 ALLRTDPLEKRGAPDPRVDDDSLGEFPVTNSRARKRILEPDDFLDDLDDE-DYEEDTPKR
:::: . .::. : : ...:. :. .:.:: :. ... ..: : ::: :::
NP_001 ALLRGEGVEKK--VDAR-EEESIQEI--------QRVLENDENVEEGNEEEDLEEDIPKR
120 130 140 150 160
180 190 200 210 220 230
pF1KB5 RGKGKSKGKGVGSARKKLDASILEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEGE
... .....: ...:.. ::. ::.::::.::::::::::::::::::::.::: :::.
NP_001 KNRTRGRARGSAGGRRRHDAASQEDHDKPYVCDICGKRYKNRPGLSYHYAHTHLASEEGD
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB5 DKEDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSKINKKTGQPEELVSCSDCG
. .:.. .: ..:.:... .::::: ..:::::::::: :..:::.:.:::::::.:::
NP_001 EAQDQETRSPPNHRNENHRPQKGPDGTVIPNNYCDFCLGGSNMNKKSGRPEELVSCADCG
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB5 RSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLTP
:::::.::::: : :::::.::::::: : .:::::::::::::::::::::::::.:
NP_001 RSGHPTCLQFTLNMTEAVKTYKWQCIECKSCILCGTSENDDQLLFCDDCDRGYHMYCLNP
290 300 310 320 330 340
360 370 380 390
pF1KB5 SMSEPPEGSWSCHLCLDLLKEKASIYQNQNSS
..:::::::::::: .::::::: . :
NP_001 PVAEPPEGSWSCHLCWELLKEKASAFGCQA
350 360 370
>>XP_016877159 (OMIM: 601672) PREDICTED: zinc finger pro (378 aa)
initn: 1867 init1: 1170 opt: 1191 Z-score: 681.2 bits: 134.8 E(85289): 3.3e-31
Smith-Waterman score: 1802; 63.0% identity (85.1% similar) in 389 aa overlap (1-388:1-377)
10 20 30 40 50 60
pF1KB5 MAAVVENVVKLLGEQYYKDAMEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR
::.:..: .: ::.:.::.:.:.:..::.:::::::::::::::::::::.:::::::::
XP_016 MATVIHNPLKALGDQFYKEAIEHCRSYNSRLCAERSVRLPFLDSQTGVAQNNCYIWMEKR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 HRGPGLASGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLE
::::::: ::::.:::: :::::: ::::::.: . :::... :::.:. :.. ..::
XP_016 HRGPGLAPGQLYTYPARCWRKKRRLHPPEDPKLRLLEIKPEVELPLKKDGFTSES-TTLE
70 80 90 100 110
130 140 150 160 170
pF1KB5 ALLRTDPLEKRGAPDPRVDDDSLGEFPVTNSRARKRILEPDDFLDDLDDE-DYEEDTPKR
:::: . .::. : : ...:. :. .:.:: :. ... ..: : ::: :::
XP_016 ALLRGEGVEKK--VDAR-EEESIQEI--------QRVLENDENVEEGNEEEDLEEDIPKR
120 130 140 150 160
180 190 200 210 220 230
pF1KB5 RGKGKSKGKGVGSARKKLDASILEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEGE
... .....: ...:.. ::. ::.::::.::::::::::::::::::::.::: :::.
XP_016 KNRTRGRARGSAGGRRRHDAASQEDHDKPYVCDICGKRYKNRPGLSYHYAHTHLASEEGD
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB5 DKEDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSKINKKTGQPEELVSCSDCG
. .:.. .: ..:.:... .::::: ..:::::::::: :..:::.:.:::::::.:::
XP_016 EAQDQETRSPPNHRNENHRPQKGPDGTVIPNNYCDFCLGGSNMNKKSGRPEELVSCADCG
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB5 RSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLTP
:::::.::::: : :::::.::::::: : .:::::::::::::::::::::::::.:
XP_016 RSGHPTCLQFTLNMTEAVKTYKWQCIECKSCILCGTSENDDQLLFCDDCDRGYHMYCLNP
290 300 310 320 330 340
360 370 380 390
pF1KB5 SMSEPPEGSWSCHLCLDLLKEKASIYQNQNSS
..:::::::::::: .::::::: . :
XP_016 PVAEPPEGSWSCHLCWELLKEKASAFGCQA
350 360 370
>>XP_005259349 (OMIM: 601670) PREDICTED: zinc finger pro (369 aa)
initn: 1765 init1: 664 opt: 1156 Z-score: 662.1 bits: 131.2 E(85289): 3.9e-30
Smith-Waterman score: 1658; 61.9% identity (78.9% similar) in 388 aa overlap (1-385:1-365)
10 20 30 40 50 60
pF1KB5 MAAVVENVVKLLGEQYYKDAMEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR
::....: .: :::..:..:.:.:..::::::::::.:::::::::::::.::::::::
XP_005 MATAIQNPLKSLGEDFYREAIEHCRSYNARLCAERSLRLPFLDSQTGVAQNNCYIWMEKT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 HRGPGLASGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLE
::::::: ::.:.:::: :::::: . ::::: : : . ::::: . . : ::
XP_005 HRGPGLAPGQIYTYPARCWRKKRRLNILEDPRLRPCEYKIDCEAPLKKEGGLPE-GPVLE
70 80 90 100 110
130 140 150 160 170
pF1KB5 ALLRTDPLEKR---GAPDPRVDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTP
::: .. ::. . .: ..: ::: ::. :: :.: :
XP_005 ALLCAETGEKKIELKEEETIMDCQQLLEFP-----------------HDLEVEDLEDDIP
120 130 140 150 160
180 190 200 210 220 230
pF1KB5 KRRGKGKSKGKGVGSARKKLDASILEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE
.:....:.:. :.:. ::. :.. ::::::::.::::::::::::::::::.:.::::::
XP_005 RRKNRAKGKAYGIGGLRKRQDTASLEDRDKPYVCDICGKRYKNRPGLSYHYTHTHLAEEE
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB5 GEDKEDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSKINKKTGQPEELVSCSD
::.. . . : .:....: ::.::: ..::.::::::: :: ::: ::.:.::.:
XP_005 GEENAERHA-LPF-HRKNNHKPKKAPDGTVIPNGYCDFCLGGSK---KTGCPEDLISCAD
230 240 250 260 270
300 310 320 330 340 350
pF1KB5 CGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCL
::::::::::::: : :::.:::::::::: :..:::::::::::::::::::::::::
XP_005 CGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCL
280 290 300 310 320 330
360 370 380 390
pF1KB5 TPSMSEPPEGSWSCHLCLDLLKEKASIYQNQNSS
.: :.::::::::::::: :::::: :
XP_005 SPPMAEPPEGSWSCHLCLRHLKEKASAYITLT
340 350 360
391 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 03:47:49 2016 done: Fri Nov 4 03:47:51 2016
Total Scan time: 9.380 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]