Result of FASTA (omim) for
pF1KB5487
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5487, 248 aa
1>>>pF1KB5487 248 - 248 aa - 248 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2016+/-0.000361; mu= 16.1443+/- 0.023
mean_var=89.7964+/-17.943, 0's: 0 Z-trim(116.0): 364 B-trim: 627 in 1/53
Lambda= 0.135346
statistics sampled from 26460 (26899) to 26460 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.697), E-opt: 0.2 (0.315), width: 16
Scan time: 6.790
The best scores are: opt bits E(85289)
NP_076429 (OMIM: 612404) ras-like protein family m ( 248) 1619 325.8 4.5e-89
NP_996563 (OMIM: 612403) ras-like protein family m ( 242) 797 165.3 9.1e-41
NP_001318055 (OMIM: 612403) ras-like protein famil ( 200) 738 153.7 2.3e-37
NP_116307 (OMIM: 612664) ras-related and estrogen- ( 199) 395 86.7 3.4e-17
NP_008843 (OMIM: 609591,615355) GTP-binding protei ( 219) 371 82.0 9.3e-16
NP_001243750 (OMIM: 609591,615355) GTP-binding pro ( 236) 371 82.1 9.8e-16
NP_002921 (OMIM: 609592) GTP-binding protein Rit2 ( 217) 339 75.8 7e-14
XP_005247285 (OMIM: 608435) PREDICTED: ras-related ( 208) 334 74.8 1.3e-13
XP_016861376 (OMIM: 608435) PREDICTED: ras-related ( 208) 334 74.8 1.3e-13
NP_001078518 (OMIM: 608435) ras-related protein M- ( 208) 334 74.8 1.3e-13
NP_001239019 (OMIM: 608435) ras-related protein M- ( 208) 334 74.8 1.3e-13
NP_036351 (OMIM: 608435) ras-related protein M-Ras ( 208) 334 74.8 1.3e-13
XP_016875610 (OMIM: 612664) PREDICTED: ras-related ( 196) 333 74.6 1.5e-13
NP_036382 (OMIM: 600098) ras-related protein R-Ras ( 204) 328 73.6 3e-13
NP_054731 (OMIM: 610388) GTP-binding protein REM 1 ( 298) 310 70.3 4.4e-12
NP_004976 (OMIM: 109800,114480,137215,163200,19007 ( 188) 301 68.3 1.1e-11
XP_011518955 (OMIM: 109800,114480,137215,163200,19 ( 188) 301 68.3 1.1e-11
XP_011527097 (OMIM: 610388) PREDICTED: GTP-binding ( 304) 299 68.1 2e-11
XP_005260461 (OMIM: 610388) PREDICTED: GTP-binding ( 306) 295 67.3 3.5e-11
XP_016883322 (OMIM: 610388) PREDICTED: GTP-binding ( 306) 295 67.3 3.5e-11
NP_001123914 (OMIM: 109800,137550,162900,163200,18 ( 189) 291 66.4 4.2e-11
NP_005334 (OMIM: 109800,137550,162900,163200,18847 ( 189) 291 66.4 4.2e-11
NP_112586 (OMIM: 605950,615222) ras-related protei ( 229) 291 66.4 4.8e-11
XP_011530601 (OMIM: 605950,615222) PREDICTED: ras- ( 277) 291 66.5 5.5e-11
XP_005247286 (OMIM: 608435) PREDICTED: ras-related ( 170) 285 65.1 8.8e-11
NP_203524 (OMIM: 109800,114480,137215,163200,19007 ( 189) 285 65.2 9.5e-11
XP_006719132 (OMIM: 109800,114480,137215,163200,19 ( 189) 285 65.2 9.5e-11
XP_016874782 (OMIM: 109800,114480,137215,163200,19 ( 227) 285 65.3 1.1e-10
NP_001243749 (OMIM: 609591,615355) GTP-binding pro ( 183) 283 64.8 1.2e-10
NP_002515 (OMIM: 114500,137550,162900,163200,16479 ( 189) 278 63.8 2.5e-10
NP_112243 (OMIM: 612565) ras-related protein Rab-1 ( 201) 276 63.5 3.4e-10
NP_001265595 (OMIM: 201000,606144) ras-related pro ( 237) 272 62.7 6.5e-10
NP_057361 (OMIM: 201000,606144) ras-related protei ( 237) 272 62.7 6.5e-10
NP_899050 (OMIM: 201000,606144) ras-related protei ( 237) 272 62.7 6.5e-10
NP_001265596 (OMIM: 201000,606144) ras-related pro ( 237) 272 62.7 6.5e-10
NP_001265597 (OMIM: 201000,606144) ras-related pro ( 237) 272 62.7 6.5e-10
NP_066361 (OMIM: 179540) ras-related protein Rap-2 ( 183) 270 62.2 7.1e-10
NP_004152 (OMIM: 179508) ras-related protein Rab-1 ( 205) 269 62.1 8.8e-10
NP_002877 (OMIM: 179541) ras-related protein Rap-2 ( 183) 267 61.7 1.1e-09
NP_001177655 (OMIM: 612664) ras-related and estrog ( 180) 266 61.5 1.2e-09
NP_006261 (OMIM: 165090) ras-related protein R-Ras ( 218) 265 61.3 1.6e-09
XP_016860110 (OMIM: 179551) PREDICTED: ras-related ( 228) 265 61.4 1.6e-09
XP_005263781 (OMIM: 179551) PREDICTED: ras-related ( 228) 265 61.4 1.6e-09
XP_011509875 (OMIM: 179551) PREDICTED: ras-related ( 229) 265 61.4 1.6e-09
NP_859053 (OMIM: 600164) GTP-binding protein GEM [ ( 296) 264 61.3 2.2e-09
NP_005252 (OMIM: 600164) GTP-binding protein GEM [ ( 296) 264 61.3 2.2e-09
XP_005263786 (OMIM: 179551) PREDICTED: ras-related ( 206) 260 60.3 3e-09
XP_005263784 (OMIM: 179551) PREDICTED: ras-related ( 206) 260 60.3 3e-09
XP_016860111 (OMIM: 179551) PREDICTED: ras-related ( 206) 260 60.3 3e-09
NP_002872 (OMIM: 179551) ras-related protein Ral-B ( 206) 260 60.3 3e-09
>>NP_076429 (OMIM: 612404) ras-like protein family membe (248 aa)
initn: 1619 init1: 1619 opt: 1619 Z-score: 1720.2 bits: 325.8 E(85289): 4.5e-89
Smith-Waterman score: 1619; 100.0% identity (100.0% similar) in 248 aa overlap (1-248:1-248)
10 20 30 40 50 60
pF1KB5 MRLIQNMCTIAEYPAPGNAAASDCCVGAAGRRLVKIAVVGASGVGKTALVVRFLTKRFIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 MRLIQNMCTIAEYPAPGNAAASDCCVGAAGRRLVKIAVVGASGVGKTALVVRFLTKRFIG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 DYERNAGNLYTRQVQIEGETLALQVQDTPGIQVHENSLSCSEQLNRCIRWADAVVIVFSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 DYERNAGNLYTRQVQIEGETLALQVQDTPGIQVHENSLSCSEQLNRCIRWADAVVIVFSI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 TDYKSYELISQLHQHVQQLHLGTRLPVVVVANKADLLHIKQVDPQLGLQLASMLGCSFYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 TDYKSYELISQLHQHVQQLHLGTRLPVVVVANKADLLHIKQVDPQLGLQLASMLGCSFYE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 VSVSENYNDVYSAFHVLCKEVSHKQQPSSTPEKRRTSLIPRPKSPNMQDLKRRFKQALSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 VSVSENYNDVYSAFHVLCKEVSHKQQPSSTPEKRRTSLIPRPKSPNMQDLKRRFKQALSA
190 200 210 220 230 240
pF1KB5 KVRTVTSV
::::::::
NP_076 KVRTVTSV
>>NP_996563 (OMIM: 612403) ras-like protein family membe (242 aa)
initn: 779 init1: 365 opt: 797 Z-score: 852.9 bits: 165.3 E(85289): 9.1e-41
Smith-Waterman score: 797; 54.2% identity (83.8% similar) in 216 aa overlap (34-248:28-241)
10 20 30 40 50 60
pF1KB5 IQNMCTIAEYPAPGNAAASDCCVGAAGRRLVKIAVVGASGVGKTALVVRFLTKRFIGDYE
.:.::.::. :::.:..:::::::::::::
NP_996 MRPLSMSGHFLLAPIPESSSDYLLPKDIKLAVLGAGRVGKSAMIVRFLTKRFIGDYE
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 RNAGNLYTRQVQIEGETLALQVQDTPG-IQVHENSLSCSEQLNRCIRWADAVVIVFSITD
:.:.::.: : .::. :.::.::::: .:.... . ..:..:..::.. ..:.::::
NP_996 PNTGKLYSRLVYVEGDQLSLQIQDTPGGVQIQDSLPQVVDSLSKCVQWAEGFLLVYSITD
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB5 YKSYELISQLHQHVQQLHLGTRLPVVVVANKADLLHIKQVDPQLGLQLASMLGCSFYEVS
: :: : :.::....: .. ::..:.::.:::: .::. : :.:::. :: : :.:
NP_996 YDSYLSIRPLYQHIRKVHPDSKAPVIIVGNKGDLLHARQVQTQDGIQLANELGSLFLEIS
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB5 VSENYNDVYSAFHVLCKEVSHKQQPSSTPEKRRTSLIPRPKSPNMQDLKRRFKQALSAKV
.::::.:: ..:. ::::::. . :. :.::.:.::::.:::::::::::::::: ::
NP_996 TSENYEDVCDVFQHLCKEVSKMHGLSG--ERRRASIIPRPRSPNMQDLKRRFKQALSPKV
180 190 200 210 220 230
pF1KB5 RTVTSV
.. ...
NP_996 KAPSALG
240
>>NP_001318055 (OMIM: 612403) ras-like protein family me (200 aa)
initn: 720 init1: 365 opt: 738 Z-score: 791.7 bits: 153.7 E(85289): 2.3e-37
Smith-Waterman score: 738; 53.7% identity (83.1% similar) in 201 aa overlap (49-248:1-199)
20 30 40 50 60 70
pF1KB5 AAASDCCVGAAGRRLVKIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEG
..::::::::::::: :.:.::.: : .::
NP_001 MIVRFLTKRFIGDYEPNTGKLYSRLVYVEG
10 20 30
80 90 100 110 120 130
pF1KB5 ETLALQVQDTPG-IQVHENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQ
. :.::.::::: .:.... . ..:..:..::.. ..:.::::: :: : :.::..
NP_001 DQLSLQIQDTPGGVQIQDSLPQVVDSLSKCVQWAEGFLLVYSITDYDSYLSIRPLYQHIR
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB5 QLHLGTRLPVVVVANKADLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVL
..: .. ::..:.::.:::: .::. : :.:::. :: : :.:.::::.:: ..:. :
NP_001 KVHPDSKAPVIIVGNKGDLLHARQVQTQDGIQLANELGSLFLEISTSENYEDVCDVFQHL
100 110 120 130 140 150
200 210 220 230 240
pF1KB5 CKEVSHKQQPSSTPEKRRTSLIPRPKSPNMQDLKRRFKQALSAKVRTVTSV
:::::. . :. :.::.:.::::.:::::::::::::::: ::.. ...
NP_001 CKEVSKMHGLSG--ERRRASIIPRPRSPNMQDLKRRFKQALSPKVKAPSALG
160 170 180 190 200
>>NP_116307 (OMIM: 612664) ras-related and estrogen-regu (199 aa)
initn: 394 init1: 225 opt: 395 Z-score: 429.7 bits: 86.7 E(85289): 3.4e-17
Smith-Waterman score: 395; 34.8% identity (71.2% similar) in 184 aa overlap (34-217:7-183)
10 20 30 40 50 60
pF1KB5 IQNMCTIAEYPAPGNAAASDCCVGAAGRRLVKIAVVGASGVGKTALVVRFLTKRFIGDYE
::.:. : .::::.:::::::::::: .:.
NP_116 MAKSAEVKLAIFGRAGVGKSALVVRFLTKRFIWEYD
10 20 30
70 80 90 100 110 120
pF1KB5 RNAGNLYTRQVQIEGETLALQVQDTPGIQVHENSLSCSEQLNRCIRWADAVVIVFSITDY
. . : .:. :. :...... :: : .:... : . .::... :.:..:::
NP_116 PTLESTYRHQATIDDEVVSMEILDTAG---QEDTI----QREGHMRWGEGFVLVYDITDR
40 50 60 70 80
130 140 150 160 170 180
pF1KB5 KSYELISQLHQHVQQLHLGTRLPVVVVANKADLLHIKQVDPQLGLQLASMLGCSFYEVSV
:.: . :.. ..... . ...:.::::: : .::. . : .::. :.:.::: :.
NP_116 GSFEEVLPLKNILDEIKKPKNVTLILVGNKADLDHSRQVSTEEGEKLATELACAFYECSA
90 100 110 120 130 140
190 200 210 220 230 240
pF1KB5 SENYNDVYSAFHVLCKEVSHKQQPSSTPEKRRTSLIPRPKSPNMQDLKRRFKQALSAKVR
. ... :. ::.:: .... .. ..: ..
NP_116 CTGEGNITEIFYELCREVRRRRMVQGKTRRRSSTTHVKQAINKMLTKISS
150 160 170 180 190
pF1KB5 TVTSV
>>NP_008843 (OMIM: 609591,615355) GTP-binding protein Ri (219 aa)
initn: 335 init1: 182 opt: 371 Z-score: 403.9 bits: 82.0 E(85289): 9.3e-16
Smith-Waterman score: 371; 28.5% identity (66.5% similar) in 221 aa overlap (17-236:4-213)
10 20 30 40 50
pF1KB5 MRLIQNMCTIAEYPAPGNAAASDCCVGAAG-RRLVKIAVVGASGVGKTALVVRFLTKRFI
:. ...:: . :: : :....::.::::.:....:...::
NP_008 MDSGTRPVGSCCSSPAGLSREYKLVMLGAGGVGKSAMTMQFISHRFP
10 20 30 40
60 70 80 90 100 110
pF1KB5 GDYERNAGNLYTRQVQIEGETLALQVQDTPGIQVHENSLSCSEQLNRCIRWADAVVIVFS
:.. . . : ...:. : :.. :: : :.. ... .. .: ... .: .:
NP_008 EDHDPTIEDAYKIRIRIDDEPANLDILDTAG-QAEFTAMR-----DQYMRAGEGFIICYS
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB5 ITDYKSYELISQLHQHVQQLHLGTRLPVVVVANKADLLHIKQVDPQLGLQLASMLGCSFY
::: .:.. . ...: . ... :::.:.::.:: ...:: . :: :: ..: :.
NP_008 ITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFF
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB5 EVSVSENYNDVYSAFHVLCKEVSHKQQPSSTPEKRRTSLIPRPKSPNMQDLKRRFKQALS
:.:.. : . ..::.: .:. .:.. . .... .::. . :: :..
NP_008 ETSAAYRYY-IDDVFHALVREIRRKEKEAVLAMEKKS----KPKNSVWKRLKSPFRKKKD
170 180 190 200 210
240
pF1KB5 AKVRTVTSV
NP_008 SVT
>>NP_001243750 (OMIM: 609591,615355) GTP-binding protein (236 aa)
initn: 335 init1: 182 opt: 371 Z-score: 403.5 bits: 82.1 E(85289): 9.8e-16
Smith-Waterman score: 371; 28.5% identity (66.5% similar) in 221 aa overlap (17-236:21-230)
10 20 30 40 50
pF1KB5 MRLIQNMCTIAEYPAPGNAAASDCCVGAAG-RRLVKIAVVGASGVGKTALVVRFLT
:. ...:: . :: : :....::.::::.:....:..
NP_001 MERWLFLGATEEGPKRTMDSGTRPVGSCCSSPAGLSREYKLVMLGAGGVGKSAMTMQFIS
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 KRFIGDYERNAGNLYTRQVQIEGETLALQVQDTPGIQVHENSLSCSEQLNRCIRWADAVV
.:: :.. . . : ...:. : :.. :: : :.. ... .. .: ... .
NP_001 HRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAG-QAEFTAMR-----DQYMRAGEGFI
70 80 90 100 110
120 130 140 150 160 170
pF1KB5 IVFSITDYKSYELISQLHQHVQQLHLGTRLPVVVVANKADLLHIKQVDPQLGLQLASMLG
: .:::: .:.. . ...: . ... :::.:.::.:: ...:: . :: :: ..
NP_001 ICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREFS
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 CSFYEVSVSENYNDVYSAFHVLCKEVSHKQQPSSTPEKRRTSLIPRPKSPNMQDLKRRFK
: :.:.:.. : . ..::.: .:. .:.. . .... .::. . :: :.
NP_001 CPFFETSAAYRYY-IDDVFHALVREIRRKEKEAVLAMEKKS----KPKNSVWKRLKSPFR
180 190 200 210 220
240
pF1KB5 QALSAKVRTVTSV
.
NP_001 KKKDSVT
230
>>NP_002921 (OMIM: 609592) GTP-binding protein Rit2 isof (217 aa)
initn: 261 init1: 117 opt: 339 Z-score: 370.2 bits: 75.8 E(85289): 7e-14
Smith-Waterman score: 339; 30.9% identity (68.1% similar) in 207 aa overlap (22-223:7-206)
10 20 30 40 50
pF1KB5 MRLIQNMCTIAEYPAPGNAAASDCCVGAA--GRRLVKIAVVGASGVGKTALVVRFLTKRF
..: :.: : : :....::.::::.:....:....:
NP_002 MEVENEASCSPGSASGGSREYKVVMLGAGGVGKSAMTMQFISHQF
10 20 30 40
60 70 80 90 100 110
pF1KB5 IGDYERNAGNLYTRQVQIEGETLALQVQDTPGIQVHENSLSCSEQLNRCIRWADAVVIVF
.. . . : ::.:..: :.. :: : :.. ... :: .: ... .: .
NP_002 PDYHDPTIEDAYKTQVRIDNEPAYLDILDTAG-QAEFTAMR--EQY---MRGGEGFIICY
50 60 70 80 90
120 130 140 150 160 170
pF1KB5 SITDYKSYELISQLHQHVQQLHLGTRLPVVVVANKADLLHIKQVDPQLGLQLASMLGCSF
:.:: .:.. ..... . :.. ..:.:.:.:: :: ...::. . ::.::. .:.:
NP_002 SVTDRQSFQEAAKFKELIFQVRHTYEIPLVLVGNKIDLEQFRQVSTEEGLSLAQEYNCGF
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB5 YEVSVSENYNDVYSAFHVLCKEVSHKQQPSSTPEK---RRTSLIPRPKSPNMQDLKRRFK
.:.:.. . . .::: : .:. .:.. : :: :. :: . :
NP_002 FETSAALRFC-IDDAFHGLVREIRKKESMPSLMEKKLKRKDSLWKKLKGSLKKKRENMT
160 170 180 190 200 210
240
pF1KB5 QALSAKVRTVTSV
>>XP_005247285 (OMIM: 608435) PREDICTED: ras-related pro (208 aa)
initn: 302 init1: 182 opt: 334 Z-score: 365.1 bits: 74.8 E(85289): 1.3e-13
Smith-Waterman score: 334; 31.1% identity (68.9% similar) in 183 aa overlap (35-217:15-190)
10 20 30 40 50 60
pF1KB5 QNMCTIAEYPAPGNAAASDCCVGAAGRRLVKIAVVGASGVGKTALVVRFLTKRFIGDYER
:..::: .::::.::...:. : :. ::.
XP_005 MATSAVPSDNLPTYKLVVVGDGGVGKSALTIQFFQKIFVPDYDP
10 20 30 40
70 80 90 100 110 120
pF1KB5 NAGNLYTRQVQIEGETLALQVQDTPGIQVHENSLSCSEQLNRCIRWADAVVIVFSITDYK
. . : ....:... :.: :: : .:. . :: .: .:. .::.:.::
XP_005 TIEDSYLKHTEIDNQWAILDVLDTAG---QEEFSAMREQY---MRTGDGFLIVYSVTDKA
50 60 70 80 90
130 140 150 160 170 180
pF1KB5 SYELISQLHQHVQQLHLGTRLPVVVVANKADLLHIKQVDPQLGLQLASMLGCSFYEVSVS
:.: ....:: . ... .:...::::.::.:.... . : ..:. . . :.:..
XP_005 SFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKITREQGKEMATKHNIPYIETSAK
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB5 ENYNDVYSAFHVLCKEVSHKQQPSSTPEKRRTSLIPRPKSPNMQDLKRRFKQALSAKVRT
. .: .::: : . : ..: : .. .:.. .
XP_005 DPPLNVDKAFHDLVR-VIRQQIPEKSQKKKKKTKWRGDRATGTHKLQCVIL
160 170 180 190 200
pF1KB5 VTSV
>>XP_016861376 (OMIM: 608435) PREDICTED: ras-related pro (208 aa)
initn: 302 init1: 182 opt: 334 Z-score: 365.1 bits: 74.8 E(85289): 1.3e-13
Smith-Waterman score: 334; 31.1% identity (68.9% similar) in 183 aa overlap (35-217:15-190)
10 20 30 40 50 60
pF1KB5 QNMCTIAEYPAPGNAAASDCCVGAAGRRLVKIAVVGASGVGKTALVVRFLTKRFIGDYER
:..::: .::::.::...:. : :. ::.
XP_016 MATSAVPSDNLPTYKLVVVGDGGVGKSALTIQFFQKIFVPDYDP
10 20 30 40
70 80 90 100 110 120
pF1KB5 NAGNLYTRQVQIEGETLALQVQDTPGIQVHENSLSCSEQLNRCIRWADAVVIVFSITDYK
. . : ....:... :.: :: : .:. . :: .: .:. .::.:.::
XP_016 TIEDSYLKHTEIDNQWAILDVLDTAG---QEEFSAMREQY---MRTGDGFLIVYSVTDKA
50 60 70 80 90
130 140 150 160 170 180
pF1KB5 SYELISQLHQHVQQLHLGTRLPVVVVANKADLLHIKQVDPQLGLQLASMLGCSFYEVSVS
:.: ....:: . ... .:...::::.::.:.... . : ..:. . . :.:..
XP_016 SFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKITREQGKEMATKHNIPYIETSAK
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB5 ENYNDVYSAFHVLCKEVSHKQQPSSTPEKRRTSLIPRPKSPNMQDLKRRFKQALSAKVRT
. .: .::: : . : ..: : .. .:.. .
XP_016 DPPLNVDKAFHDLVR-VIRQQIPEKSQKKKKKTKWRGDRATGTHKLQCVIL
160 170 180 190 200
pF1KB5 VTSV
>>NP_001078518 (OMIM: 608435) ras-related protein M-Ras (208 aa)
initn: 302 init1: 182 opt: 334 Z-score: 365.1 bits: 74.8 E(85289): 1.3e-13
Smith-Waterman score: 334; 31.1% identity (68.9% similar) in 183 aa overlap (35-217:15-190)
10 20 30 40 50 60
pF1KB5 QNMCTIAEYPAPGNAAASDCCVGAAGRRLVKIAVVGASGVGKTALVVRFLTKRFIGDYER
:..::: .::::.::...:. : :. ::.
NP_001 MATSAVPSDNLPTYKLVVVGDGGVGKSALTIQFFQKIFVPDYDP
10 20 30 40
70 80 90 100 110 120
pF1KB5 NAGNLYTRQVQIEGETLALQVQDTPGIQVHENSLSCSEQLNRCIRWADAVVIVFSITDYK
. . : ....:... :.: :: : .:. . :: .: .:. .::.:.::
NP_001 TIEDSYLKHTEIDNQWAILDVLDTAG---QEEFSAMREQY---MRTGDGFLIVYSVTDKA
50 60 70 80 90
130 140 150 160 170 180
pF1KB5 SYELISQLHQHVQQLHLGTRLPVVVVANKADLLHIKQVDPQLGLQLASMLGCSFYEVSVS
:.: ....:: . ... .:...::::.::.:.... . : ..:. . . :.:..
NP_001 SFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKITREQGKEMATKHNIPYIETSAK
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB5 ENYNDVYSAFHVLCKEVSHKQQPSSTPEKRRTSLIPRPKSPNMQDLKRRFKQALSAKVRT
. .: .::: : . : ..: : .. .:.. .
NP_001 DPPLNVDKAFHDLVR-VIRQQIPEKSQKKKKKTKWRGDRATGTHKLQCVIL
160 170 180 190 200
pF1KB5 VTSV
248 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 20:08:13 2016 done: Fri Nov 4 20:08:14 2016
Total Scan time: 6.790 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]