Result of FASTA (omim) for
pF1KB5497
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5497, 479 aa
1>>>pF1KB5497 479 - 479 aa - 479 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.0470+/-0.000591; mu= 6.1589+/- 0.036
mean_var=298.9781+/-62.750, 0's: 0 Z-trim(115.3): 2032 B-trim: 153 in 1/53
Lambda= 0.074174
statistics sampled from 23388 (25710) to 23388 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.644), E-opt: 0.2 (0.301), width: 16
Scan time: 9.750
The best scores are: opt bits E(85289)
NP_001018854 (OMIM: 616474) zinc finger and SCAN d ( 479) 3308 368.4 2.5e-101
XP_011513164 (OMIM: 616474) PREDICTED: zinc finger ( 479) 3308 368.4 2.5e-101
XP_016866753 (OMIM: 616474) PREDICTED: zinc finger ( 478) 3291 366.6 8.8e-101
NP_001104509 (OMIM: 616474) zinc finger and SCAN d ( 478) 3291 366.6 8.8e-101
XP_011513166 (OMIM: 616474) PREDICTED: zinc finger ( 450) 3089 344.9 2.7e-94
NP_001274350 (OMIM: 616474) zinc finger and SCAN d ( 344) 2388 269.7 8.8e-72
NP_689949 (OMIM: 616474) zinc finger and SCAN doma ( 344) 2388 269.7 8.8e-72
XP_011513171 (OMIM: 616474) PREDICTED: zinc finger ( 333) 2122 241.3 3.2e-63
XP_011513168 (OMIM: 616474) PREDICTED: zinc finger ( 333) 2122 241.3 3.2e-63
XP_011513169 (OMIM: 616474) PREDICTED: zinc finger ( 333) 2122 241.3 3.2e-63
XP_016866754 (OMIM: 616474) PREDICTED: zinc finger ( 333) 2122 241.3 3.2e-63
NP_001274351 (OMIM: 616474) zinc finger and SCAN d ( 270) 1931 220.7 4e-57
XP_011513319 (OMIM: 603978) PREDICTED: zinc finger ( 565) 1296 153.2 1.8e-36
XP_016867017 (OMIM: 603978) PREDICTED: zinc finger ( 611) 1296 153.2 1.9e-36
XP_011513316 (OMIM: 603978) PREDICTED: zinc finger ( 611) 1296 153.2 1.9e-36
XP_011513317 (OMIM: 603978) PREDICTED: zinc finger ( 611) 1296 153.2 1.9e-36
NP_001156863 (OMIM: 603978) zinc finger and SCAN d ( 611) 1296 153.2 1.9e-36
XP_006715278 (OMIM: 612791) PREDICTED: zinc finger ( 538) 1046 126.4 2e-28
NP_077819 (OMIM: 612791) zinc finger protein with ( 538) 1046 126.4 2e-28
NP_001229823 (OMIM: 612791) zinc finger protein wi ( 538) 1046 126.4 2e-28
NP_001265050 (OMIM: 602240) zinc finger protein wi ( 391) 1029 124.4 5.7e-28
NP_001265051 (OMIM: 602240) zinc finger protein wi ( 391) 1029 124.4 5.7e-28
XP_011513176 (OMIM: 602240) PREDICTED: zinc finger ( 391) 1029 124.4 5.7e-28
XP_011513175 (OMIM: 602240) PREDICTED: zinc finger ( 391) 1029 124.4 5.7e-28
NP_006289 (OMIM: 602240) zinc finger protein with ( 578) 1029 124.6 7.2e-28
XP_011513172 (OMIM: 602240) PREDICTED: zinc finger ( 578) 1029 124.6 7.2e-28
NP_001265048 (OMIM: 602240) zinc finger protein wi ( 578) 1029 124.6 7.2e-28
XP_016866755 (OMIM: 602240) PREDICTED: zinc finger ( 578) 1029 124.6 7.2e-28
NP_001307882 (OMIM: 616463) zinc finger protein 23 ( 417) 1005 121.9 3.5e-27
NP_001307883 (OMIM: 616463) zinc finger protein 23 ( 417) 1005 121.9 3.5e-27
NP_055334 (OMIM: 616463) zinc finger protein 232 i ( 444) 1005 121.9 3.7e-27
XP_016880510 (OMIM: 616463) PREDICTED: zinc finger ( 444) 1005 121.9 3.7e-27
XP_011522308 (OMIM: 616463) PREDICTED: zinc finger ( 396) 1003 121.6 4e-27
XP_005249152 (OMIM: 611643) PREDICTED: zinc finger ( 545) 1000 121.5 6e-27
NP_061983 (OMIM: 611643) zinc finger protein with ( 545) 1000 121.5 6e-27
NP_001276331 (OMIM: 604077) zinc finger protein 13 ( 616) 991 120.6 1.3e-26
XP_016882731 (OMIM: 604077) PREDICTED: zinc finger ( 621) 991 120.6 1.3e-26
XP_016882730 (OMIM: 604077) PREDICTED: zinc finger ( 628) 991 120.6 1.3e-26
XP_016882729 (OMIM: 604077) PREDICTED: zinc finger ( 658) 991 120.6 1.3e-26
NP_001276330 (OMIM: 604077) zinc finger protein 13 ( 658) 991 120.6 1.3e-26
XP_005259268 (OMIM: 604077) PREDICTED: zinc finger ( 670) 991 120.6 1.3e-26
XP_006723426 (OMIM: 604077) PREDICTED: zinc finger ( 670) 991 120.6 1.3e-26
NP_003427 (OMIM: 604077) zinc finger protein 135 i ( 670) 991 120.6 1.3e-26
XP_006723425 (OMIM: 604077) PREDICTED: zinc finger ( 670) 991 120.6 1.3e-26
NP_009065 (OMIM: 604077) zinc finger protein 135 i ( 682) 991 120.7 1.3e-26
NP_001273627 (OMIM: 194552) zinc finger protein 79 ( 364) 981 119.2 1.9e-26
XP_006717342 (OMIM: 194552) PREDICTED: zinc finger ( 474) 981 119.4 2.3e-26
NP_001273626 (OMIM: 194552) zinc finger protein 79 ( 474) 981 119.4 2.3e-26
NP_001273625 (OMIM: 194552) zinc finger protein 79 ( 474) 981 119.4 2.3e-26
NP_001309189 (OMIM: 194552) zinc finger protein 79 ( 474) 981 119.4 2.3e-26
>>NP_001018854 (OMIM: 616474) zinc finger and SCAN domai (479 aa)
initn: 3308 init1: 3308 opt: 3308 Z-score: 1940.2 bits: 368.4 E(85289): 2.5e-101
Smith-Waterman score: 3308; 100.0% identity (100.0% similar) in 479 aa overlap (1-479:1-479)
10 20 30 40 50 60
pF1KB5 MATALVSAHSLAPLNLKKEGLRVVREDHYSTWEQGFKLQGNSKGLGQEPLCKQFRQLRYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATALVSAHSLAPLNLKKEGLRVVREDHYSTWEQGFKLQGNSKGLGQEPLCKQFRQLRYE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ETTGPREALSRLRELCQQWLQPETHTKEQILELLVLEQFLIILPKELQARVQEHHPESRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETTGPREALSRLRELCQQWLQPETHTKEQILELLVLEQFLIILPKELQARVQEHHPESRE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 DVVVVLEDLQLDLGETGQQVDPDQPKKQKILVEEMAPLKGVQEQQVRHECEVTKPEKEKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DVVVVLEDLQLDLGETGQQVDPDQPKKQKILVEEMAPLKGVQEQQVRHECEVTKPEKEKG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 EETRIENGKLIVVTDSCGRVESSGKISEPMEAHNEGSNLERHQAKPKEKIEYKCSEREQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EETRIENGKLIVVTDSCGRVESSGKISEPMEAHNEGSNLERHQAKPKEKIEYKCSEREQR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 FIQHLDLIEHASTHTGKKLCESDVCQSSSLTGHKKVLSREKGHQCHECGKAFQRSSHLVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FIQHLDLIEHASTHTGKKLCESDVCQSSSLTGHKKVLSREKGHQCHECGKAFQRSSHLVR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 HQKIHLGEKPYQCNECGKVFSQNAGLLEHLRIHTGEKPYLCIHCGKNFRRSSHLNRHQRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HQKIHLGEKPYQCNECGKVFSQNAGLLEHLRIHTGEKPYLCIHCGKNFRRSSHLNRHQRI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 HSQEEPCECKECGKTFSQALLLTHHQRIHSHSKSHQCNECGKAFSLTSDLIRHHRIHTGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HSQEEPCECKECGKTFSQALLLTHHQRIHSHSKSHQCNECGKAFSLTSDLIRHHRIHTGE
370 380 390 400 410 420
430 440 450 460 470
pF1KB5 KPFKCNICQKAFRLNSHLAQHVRIHNEEKPYQCSECGEAFRQRSGLFQHQRYHHKDKLA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KPFKCNICQKAFRLNSHLAQHVRIHNEEKPYQCSECGEAFRQRSGLFQHQRYHHKDKLA
430 440 450 460 470
>>XP_011513164 (OMIM: 616474) PREDICTED: zinc finger and (479 aa)
initn: 3308 init1: 3308 opt: 3308 Z-score: 1940.2 bits: 368.4 E(85289): 2.5e-101
Smith-Waterman score: 3308; 100.0% identity (100.0% similar) in 479 aa overlap (1-479:1-479)
10 20 30 40 50 60
pF1KB5 MATALVSAHSLAPLNLKKEGLRVVREDHYSTWEQGFKLQGNSKGLGQEPLCKQFRQLRYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MATALVSAHSLAPLNLKKEGLRVVREDHYSTWEQGFKLQGNSKGLGQEPLCKQFRQLRYE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ETTGPREALSRLRELCQQWLQPETHTKEQILELLVLEQFLIILPKELQARVQEHHPESRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ETTGPREALSRLRELCQQWLQPETHTKEQILELLVLEQFLIILPKELQARVQEHHPESRE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 DVVVVLEDLQLDLGETGQQVDPDQPKKQKILVEEMAPLKGVQEQQVRHECEVTKPEKEKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DVVVVLEDLQLDLGETGQQVDPDQPKKQKILVEEMAPLKGVQEQQVRHECEVTKPEKEKG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 EETRIENGKLIVVTDSCGRVESSGKISEPMEAHNEGSNLERHQAKPKEKIEYKCSEREQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EETRIENGKLIVVTDSCGRVESSGKISEPMEAHNEGSNLERHQAKPKEKIEYKCSEREQR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 FIQHLDLIEHASTHTGKKLCESDVCQSSSLTGHKKVLSREKGHQCHECGKAFQRSSHLVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FIQHLDLIEHASTHTGKKLCESDVCQSSSLTGHKKVLSREKGHQCHECGKAFQRSSHLVR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 HQKIHLGEKPYQCNECGKVFSQNAGLLEHLRIHTGEKPYLCIHCGKNFRRSSHLNRHQRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HQKIHLGEKPYQCNECGKVFSQNAGLLEHLRIHTGEKPYLCIHCGKNFRRSSHLNRHQRI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 HSQEEPCECKECGKTFSQALLLTHHQRIHSHSKSHQCNECGKAFSLTSDLIRHHRIHTGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HSQEEPCECKECGKTFSQALLLTHHQRIHSHSKSHQCNECGKAFSLTSDLIRHHRIHTGE
370 380 390 400 410 420
430 440 450 460 470
pF1KB5 KPFKCNICQKAFRLNSHLAQHVRIHNEEKPYQCSECGEAFRQRSGLFQHQRYHHKDKLA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KPFKCNICQKAFRLNSHLAQHVRIHNEEKPYQCSECGEAFRQRSGLFQHQRYHHKDKLA
430 440 450 460 470
>>XP_016866753 (OMIM: 616474) PREDICTED: zinc finger and (478 aa)
initn: 2844 init1: 2391 opt: 3291 Z-score: 1930.4 bits: 366.6 E(85289): 8.8e-101
Smith-Waterman score: 3291; 99.8% identity (99.8% similar) in 479 aa overlap (1-479:1-478)
10 20 30 40 50 60
pF1KB5 MATALVSAHSLAPLNLKKEGLRVVREDHYSTWEQGFKLQGNSKGLGQEPLCKQFRQLRYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MATALVSAHSLAPLNLKKEGLRVVREDHYSTWEQGFKLQGNSKGLGQEPLCKQFRQLRYE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ETTGPREALSRLRELCQQWLQPETHTKEQILELLVLEQFLIILPKELQARVQEHHPESRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ETTGPREALSRLRELCQQWLQPETHTKEQILELLVLEQFLIILPKELQARVQEHHPESRE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 DVVVVLEDLQLDLGETGQQVDPDQPKKQKILVEEMAPLKGVQEQQVRHECEVTKPEKEKG
::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::
XP_016 DVVVVLEDLQLDLGETGQQ-DPDQPKKQKILVEEMAPLKGVQEQQVRHECEVTKPEKEKG
130 140 150 160 170
190 200 210 220 230 240
pF1KB5 EETRIENGKLIVVTDSCGRVESSGKISEPMEAHNEGSNLERHQAKPKEKIEYKCSEREQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EETRIENGKLIVVTDSCGRVESSGKISEPMEAHNEGSNLERHQAKPKEKIEYKCSEREQR
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB5 FIQHLDLIEHASTHTGKKLCESDVCQSSSLTGHKKVLSREKGHQCHECGKAFQRSSHLVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FIQHLDLIEHASTHTGKKLCESDVCQSSSLTGHKKVLSREKGHQCHECGKAFQRSSHLVR
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB5 HQKIHLGEKPYQCNECGKVFSQNAGLLEHLRIHTGEKPYLCIHCGKNFRRSSHLNRHQRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HQKIHLGEKPYQCNECGKVFSQNAGLLEHLRIHTGEKPYLCIHCGKNFRRSSHLNRHQRI
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB5 HSQEEPCECKECGKTFSQALLLTHHQRIHSHSKSHQCNECGKAFSLTSDLIRHHRIHTGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HSQEEPCECKECGKTFSQALLLTHHQRIHSHSKSHQCNECGKAFSLTSDLIRHHRIHTGE
360 370 380 390 400 410
430 440 450 460 470
pF1KB5 KPFKCNICQKAFRLNSHLAQHVRIHNEEKPYQCSECGEAFRQRSGLFQHQRYHHKDKLA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KPFKCNICQKAFRLNSHLAQHVRIHNEEKPYQCSECGEAFRQRSGLFQHQRYHHKDKLA
420 430 440 450 460 470
>>NP_001104509 (OMIM: 616474) zinc finger and SCAN domai (478 aa)
initn: 2844 init1: 2391 opt: 3291 Z-score: 1930.4 bits: 366.6 E(85289): 8.8e-101
Smith-Waterman score: 3291; 99.8% identity (99.8% similar) in 479 aa overlap (1-479:1-478)
10 20 30 40 50 60
pF1KB5 MATALVSAHSLAPLNLKKEGLRVVREDHYSTWEQGFKLQGNSKGLGQEPLCKQFRQLRYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATALVSAHSLAPLNLKKEGLRVVREDHYSTWEQGFKLQGNSKGLGQEPLCKQFRQLRYE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ETTGPREALSRLRELCQQWLQPETHTKEQILELLVLEQFLIILPKELQARVQEHHPESRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETTGPREALSRLRELCQQWLQPETHTKEQILELLVLEQFLIILPKELQARVQEHHPESRE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 DVVVVLEDLQLDLGETGQQVDPDQPKKQKILVEEMAPLKGVQEQQVRHECEVTKPEKEKG
::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::
NP_001 DVVVVLEDLQLDLGETGQQ-DPDQPKKQKILVEEMAPLKGVQEQQVRHECEVTKPEKEKG
130 140 150 160 170
190 200 210 220 230 240
pF1KB5 EETRIENGKLIVVTDSCGRVESSGKISEPMEAHNEGSNLERHQAKPKEKIEYKCSEREQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EETRIENGKLIVVTDSCGRVESSGKISEPMEAHNEGSNLERHQAKPKEKIEYKCSEREQR
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB5 FIQHLDLIEHASTHTGKKLCESDVCQSSSLTGHKKVLSREKGHQCHECGKAFQRSSHLVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FIQHLDLIEHASTHTGKKLCESDVCQSSSLTGHKKVLSREKGHQCHECGKAFQRSSHLVR
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB5 HQKIHLGEKPYQCNECGKVFSQNAGLLEHLRIHTGEKPYLCIHCGKNFRRSSHLNRHQRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HQKIHLGEKPYQCNECGKVFSQNAGLLEHLRIHTGEKPYLCIHCGKNFRRSSHLNRHQRI
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB5 HSQEEPCECKECGKTFSQALLLTHHQRIHSHSKSHQCNECGKAFSLTSDLIRHHRIHTGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HSQEEPCECKECGKTFSQALLLTHHQRIHSHSKSHQCNECGKAFSLTSDLIRHHRIHTGE
360 370 380 390 400 410
430 440 450 460 470
pF1KB5 KPFKCNICQKAFRLNSHLAQHVRIHNEEKPYQCSECGEAFRQRSGLFQHQRYHHKDKLA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KPFKCNICQKAFRLNSHLAQHVRIHNEEKPYQCSECGEAFRQRSGLFQHQRYHHKDKLA
420 430 440 450 460 470
>>XP_011513166 (OMIM: 616474) PREDICTED: zinc finger and (450 aa)
initn: 3089 init1: 3089 opt: 3089 Z-score: 1813.8 bits: 344.9 E(85289): 2.7e-94
Smith-Waterman score: 3089; 100.0% identity (100.0% similar) in 445 aa overlap (35-479:6-450)
10 20 30 40 50 60
pF1KB5 LVSAHSLAPLNLKKEGLRVVREDHYSTWEQGFKLQGNSKGLGQEPLCKQFRQLRYEETTG
::::::::::::::::::::::::::::::
XP_011 MATALGFKLQGNSKGLGQEPLCKQFRQLRYEETTG
10 20 30
70 80 90 100 110 120
pF1KB5 PREALSRLRELCQQWLQPETHTKEQILELLVLEQFLIILPKELQARVQEHHPESREDVVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PREALSRLRELCQQWLQPETHTKEQILELLVLEQFLIILPKELQARVQEHHPESREDVVV
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB5 VLEDLQLDLGETGQQVDPDQPKKQKILVEEMAPLKGVQEQQVRHECEVTKPEKEKGEETR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VLEDLQLDLGETGQQVDPDQPKKQKILVEEMAPLKGVQEQQVRHECEVTKPEKEKGEETR
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB5 IENGKLIVVTDSCGRVESSGKISEPMEAHNEGSNLERHQAKPKEKIEYKCSEREQRFIQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IENGKLIVVTDSCGRVESSGKISEPMEAHNEGSNLERHQAKPKEKIEYKCSEREQRFIQH
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB5 LDLIEHASTHTGKKLCESDVCQSSSLTGHKKVLSREKGHQCHECGKAFQRSSHLVRHQKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LDLIEHASTHTGKKLCESDVCQSSSLTGHKKVLSREKGHQCHECGKAFQRSSHLVRHQKI
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB5 HLGEKPYQCNECGKVFSQNAGLLEHLRIHTGEKPYLCIHCGKNFRRSSHLNRHQRIHSQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HLGEKPYQCNECGKVFSQNAGLLEHLRIHTGEKPYLCIHCGKNFRRSSHLNRHQRIHSQE
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB5 EPCECKECGKTFSQALLLTHHQRIHSHSKSHQCNECGKAFSLTSDLIRHHRIHTGEKPFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EPCECKECGKTFSQALLLTHHQRIHSHSKSHQCNECGKAFSLTSDLIRHHRIHTGEKPFK
340 350 360 370 380 390
430 440 450 460 470
pF1KB5 CNICQKAFRLNSHLAQHVRIHNEEKPYQCSECGEAFRQRSGLFQHQRYHHKDKLA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CNICQKAFRLNSHLAQHVRIHNEEKPYQCSECGEAFRQRSGLFQHQRYHHKDKLA
400 410 420 430 440 450
>>NP_001274350 (OMIM: 616474) zinc finger and SCAN domai (344 aa)
initn: 2388 init1: 2388 opt: 2388 Z-score: 1409.7 bits: 269.7 E(85289): 8.8e-72
Smith-Waterman score: 2388; 99.7% identity (100.0% similar) in 340 aa overlap (140-479:5-344)
110 120 130 140 150 160
pF1KB5 RVQEHHPESREDVVVVLEDLQLDLGETGQQVDPDQPKKQKILVEEMAPLKGVQEQQVRHE
.:::::::::::::::::::::::::::::
NP_001 MATALDPDQPKKQKILVEEMAPLKGVQEQQVRHE
10 20 30
170 180 190 200 210 220
pF1KB5 CEVTKPEKEKGEETRIENGKLIVVTDSCGRVESSGKISEPMEAHNEGSNLERHQAKPKEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CEVTKPEKEKGEETRIENGKLIVVTDSCGRVESSGKISEPMEAHNEGSNLERHQAKPKEK
40 50 60 70 80 90
230 240 250 260 270 280
pF1KB5 IEYKCSEREQRFIQHLDLIEHASTHTGKKLCESDVCQSSSLTGHKKVLSREKGHQCHECG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IEYKCSEREQRFIQHLDLIEHASTHTGKKLCESDVCQSSSLTGHKKVLSREKGHQCHECG
100 110 120 130 140 150
290 300 310 320 330 340
pF1KB5 KAFQRSSHLVRHQKIHLGEKPYQCNECGKVFSQNAGLLEHLRIHTGEKPYLCIHCGKNFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KAFQRSSHLVRHQKIHLGEKPYQCNECGKVFSQNAGLLEHLRIHTGEKPYLCIHCGKNFR
160 170 180 190 200 210
350 360 370 380 390 400
pF1KB5 RSSHLNRHQRIHSQEEPCECKECGKTFSQALLLTHHQRIHSHSKSHQCNECGKAFSLTSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSSHLNRHQRIHSQEEPCECKECGKTFSQALLLTHHQRIHSHSKSHQCNECGKAFSLTSD
220 230 240 250 260 270
410 420 430 440 450 460
pF1KB5 LIRHHRIHTGEKPFKCNICQKAFRLNSHLAQHVRIHNEEKPYQCSECGEAFRQRSGLFQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LIRHHRIHTGEKPFKCNICQKAFRLNSHLAQHVRIHNEEKPYQCSECGEAFRQRSGLFQH
280 290 300 310 320 330
470
pF1KB5 QRYHHKDKLA
::::::::::
NP_001 QRYHHKDKLA
340
>>NP_689949 (OMIM: 616474) zinc finger and SCAN domain-c (344 aa)
initn: 2388 init1: 2388 opt: 2388 Z-score: 1409.7 bits: 269.7 E(85289): 8.8e-72
Smith-Waterman score: 2388; 99.7% identity (100.0% similar) in 340 aa overlap (140-479:5-344)
110 120 130 140 150 160
pF1KB5 RVQEHHPESREDVVVVLEDLQLDLGETGQQVDPDQPKKQKILVEEMAPLKGVQEQQVRHE
.:::::::::::::::::::::::::::::
NP_689 MATALDPDQPKKQKILVEEMAPLKGVQEQQVRHE
10 20 30
170 180 190 200 210 220
pF1KB5 CEVTKPEKEKGEETRIENGKLIVVTDSCGRVESSGKISEPMEAHNEGSNLERHQAKPKEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 CEVTKPEKEKGEETRIENGKLIVVTDSCGRVESSGKISEPMEAHNEGSNLERHQAKPKEK
40 50 60 70 80 90
230 240 250 260 270 280
pF1KB5 IEYKCSEREQRFIQHLDLIEHASTHTGKKLCESDVCQSSSLTGHKKVLSREKGHQCHECG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 IEYKCSEREQRFIQHLDLIEHASTHTGKKLCESDVCQSSSLTGHKKVLSREKGHQCHECG
100 110 120 130 140 150
290 300 310 320 330 340
pF1KB5 KAFQRSSHLVRHQKIHLGEKPYQCNECGKVFSQNAGLLEHLRIHTGEKPYLCIHCGKNFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 KAFQRSSHLVRHQKIHLGEKPYQCNECGKVFSQNAGLLEHLRIHTGEKPYLCIHCGKNFR
160 170 180 190 200 210
350 360 370 380 390 400
pF1KB5 RSSHLNRHQRIHSQEEPCECKECGKTFSQALLLTHHQRIHSHSKSHQCNECGKAFSLTSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 RSSHLNRHQRIHSQEEPCECKECGKTFSQALLLTHHQRIHSHSKSHQCNECGKAFSLTSD
220 230 240 250 260 270
410 420 430 440 450 460
pF1KB5 LIRHHRIHTGEKPFKCNICQKAFRLNSHLAQHVRIHNEEKPYQCSECGEAFRQRSGLFQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 LIRHHRIHTGEKPFKCNICQKAFRLNSHLAQHVRIHNEEKPYQCSECGEAFRQRSGLFQH
280 290 300 310 320 330
470
pF1KB5 QRYHHKDKLA
::::::::::
NP_689 QRYHHKDKLA
340
>>XP_011513171 (OMIM: 616474) PREDICTED: zinc finger and (333 aa)
initn: 2122 init1: 2122 opt: 2122 Z-score: 1256.0 bits: 241.3 E(85289): 3.2e-63
Smith-Waterman score: 2122; 100.0% identity (100.0% similar) in 300 aa overlap (180-479:34-333)
150 160 170 180 190 200
pF1KB5 ILVEEMAPLKGVQEQQVRHECEVTKPEKEKGEETRIENGKLIVVTDSCGRVESSGKISEP
::::::::::::::::::::::::::::::
XP_011 KLQSLRKRRLQIPFPKHQKTSNWWYIFNIAGEETRIENGKLIVVTDSCGRVESSGKISEP
10 20 30 40 50 60
210 220 230 240 250 260
pF1KB5 MEAHNEGSNLERHQAKPKEKIEYKCSEREQRFIQHLDLIEHASTHTGKKLCESDVCQSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MEAHNEGSNLERHQAKPKEKIEYKCSEREQRFIQHLDLIEHASTHTGKKLCESDVCQSSS
70 80 90 100 110 120
270 280 290 300 310 320
pF1KB5 LTGHKKVLSREKGHQCHECGKAFQRSSHLVRHQKIHLGEKPYQCNECGKVFSQNAGLLEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LTGHKKVLSREKGHQCHECGKAFQRSSHLVRHQKIHLGEKPYQCNECGKVFSQNAGLLEH
130 140 150 160 170 180
330 340 350 360 370 380
pF1KB5 LRIHTGEKPYLCIHCGKNFRRSSHLNRHQRIHSQEEPCECKECGKTFSQALLLTHHQRIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRIHTGEKPYLCIHCGKNFRRSSHLNRHQRIHSQEEPCECKECGKTFSQALLLTHHQRIH
190 200 210 220 230 240
390 400 410 420 430 440
pF1KB5 SHSKSHQCNECGKAFSLTSDLIRHHRIHTGEKPFKCNICQKAFRLNSHLAQHVRIHNEEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SHSKSHQCNECGKAFSLTSDLIRHHRIHTGEKPFKCNICQKAFRLNSHLAQHVRIHNEEK
250 260 270 280 290 300
450 460 470
pF1KB5 PYQCSECGEAFRQRSGLFQHQRYHHKDKLA
::::::::::::::::::::::::::::::
XP_011 PYQCSECGEAFRQRSGLFQHQRYHHKDKLA
310 320 330
>>XP_011513168 (OMIM: 616474) PREDICTED: zinc finger and (333 aa)
initn: 2122 init1: 2122 opt: 2122 Z-score: 1256.0 bits: 241.3 E(85289): 3.2e-63
Smith-Waterman score: 2122; 100.0% identity (100.0% similar) in 300 aa overlap (180-479:34-333)
150 160 170 180 190 200
pF1KB5 ILVEEMAPLKGVQEQQVRHECEVTKPEKEKGEETRIENGKLIVVTDSCGRVESSGKISEP
::::::::::::::::::::::::::::::
XP_011 KLQSLRKRRLQIPFPKHQKTSNWWYIFNIAGEETRIENGKLIVVTDSCGRVESSGKISEP
10 20 30 40 50 60
210 220 230 240 250 260
pF1KB5 MEAHNEGSNLERHQAKPKEKIEYKCSEREQRFIQHLDLIEHASTHTGKKLCESDVCQSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MEAHNEGSNLERHQAKPKEKIEYKCSEREQRFIQHLDLIEHASTHTGKKLCESDVCQSSS
70 80 90 100 110 120
270 280 290 300 310 320
pF1KB5 LTGHKKVLSREKGHQCHECGKAFQRSSHLVRHQKIHLGEKPYQCNECGKVFSQNAGLLEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LTGHKKVLSREKGHQCHECGKAFQRSSHLVRHQKIHLGEKPYQCNECGKVFSQNAGLLEH
130 140 150 160 170 180
330 340 350 360 370 380
pF1KB5 LRIHTGEKPYLCIHCGKNFRRSSHLNRHQRIHSQEEPCECKECGKTFSQALLLTHHQRIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRIHTGEKPYLCIHCGKNFRRSSHLNRHQRIHSQEEPCECKECGKTFSQALLLTHHQRIH
190 200 210 220 230 240
390 400 410 420 430 440
pF1KB5 SHSKSHQCNECGKAFSLTSDLIRHHRIHTGEKPFKCNICQKAFRLNSHLAQHVRIHNEEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SHSKSHQCNECGKAFSLTSDLIRHHRIHTGEKPFKCNICQKAFRLNSHLAQHVRIHNEEK
250 260 270 280 290 300
450 460 470
pF1KB5 PYQCSECGEAFRQRSGLFQHQRYHHKDKLA
::::::::::::::::::::::::::::::
XP_011 PYQCSECGEAFRQRSGLFQHQRYHHKDKLA
310 320 330
>>XP_011513169 (OMIM: 616474) PREDICTED: zinc finger and (333 aa)
initn: 2122 init1: 2122 opt: 2122 Z-score: 1256.0 bits: 241.3 E(85289): 3.2e-63
Smith-Waterman score: 2122; 100.0% identity (100.0% similar) in 300 aa overlap (180-479:34-333)
150 160 170 180 190 200
pF1KB5 ILVEEMAPLKGVQEQQVRHECEVTKPEKEKGEETRIENGKLIVVTDSCGRVESSGKISEP
::::::::::::::::::::::::::::::
XP_011 KLQSLRKRRLQIPFPKHQKTSNWWYIFNIAGEETRIENGKLIVVTDSCGRVESSGKISEP
10 20 30 40 50 60
210 220 230 240 250 260
pF1KB5 MEAHNEGSNLERHQAKPKEKIEYKCSEREQRFIQHLDLIEHASTHTGKKLCESDVCQSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MEAHNEGSNLERHQAKPKEKIEYKCSEREQRFIQHLDLIEHASTHTGKKLCESDVCQSSS
70 80 90 100 110 120
270 280 290 300 310 320
pF1KB5 LTGHKKVLSREKGHQCHECGKAFQRSSHLVRHQKIHLGEKPYQCNECGKVFSQNAGLLEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LTGHKKVLSREKGHQCHECGKAFQRSSHLVRHQKIHLGEKPYQCNECGKVFSQNAGLLEH
130 140 150 160 170 180
330 340 350 360 370 380
pF1KB5 LRIHTGEKPYLCIHCGKNFRRSSHLNRHQRIHSQEEPCECKECGKTFSQALLLTHHQRIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRIHTGEKPYLCIHCGKNFRRSSHLNRHQRIHSQEEPCECKECGKTFSQALLLTHHQRIH
190 200 210 220 230 240
390 400 410 420 430 440
pF1KB5 SHSKSHQCNECGKAFSLTSDLIRHHRIHTGEKPFKCNICQKAFRLNSHLAQHVRIHNEEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SHSKSHQCNECGKAFSLTSDLIRHHRIHTGEKPFKCNICQKAFRLNSHLAQHVRIHNEEK
250 260 270 280 290 300
450 460 470
pF1KB5 PYQCSECGEAFRQRSGLFQHQRYHHKDKLA
::::::::::::::::::::::::::::::
XP_011 PYQCSECGEAFRQRSGLFQHQRYHHKDKLA
310 320 330
479 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 03:50:34 2016 done: Fri Nov 4 03:50:35 2016
Total Scan time: 9.750 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]