Result of FASTA (omim) for
pF1KB5543
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5543, 346 aa
1>>>pF1KB5543 346 - 346 aa - 346 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4337+/-0.000352; mu= 15.6208+/- 0.022
mean_var=66.3398+/-13.527, 0's: 0 Z-trim(114.4): 29 B-trim: 1188 in 1/55
Lambda= 0.157466
statistics sampled from 24259 (24287) to 24259 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.657), E-opt: 0.2 (0.285), width: 16
Scan time: 7.990
The best scores are: opt bits E(85289)
NP_000018 (OMIM: 208400,613228) N(4)-(beta-N-acety ( 346) 2347 541.9 7.4e-154
NP_001165459 (OMIM: 208400,613228) N(4)-(beta-N-ac ( 336) 1537 357.9 1.8e-98
NP_060184 (OMIM: 608270) threonine aspartase 1 iso ( 420) 274 71.0 5.1e-12
XP_011527596 (OMIM: 608270) PREDICTED: threonine a ( 318) 236 62.3 1.6e-09
NP_001310532 (OMIM: 608270) threonine aspartase 1 ( 318) 236 62.3 1.6e-09
XP_016883417 (OMIM: 608270) PREDICTED: threonine a ( 318) 236 62.3 1.6e-09
XP_011527594 (OMIM: 608270) PREDICTED: threonine a ( 318) 236 62.3 1.6e-09
XP_016883416 (OMIM: 608270) PREDICTED: threonine a ( 318) 236 62.3 1.6e-09
NP_001310533 (OMIM: 608270) threonine aspartase 1 ( 318) 236 62.3 1.6e-09
XP_016873843 (OMIM: 609212) PREDICTED: isoaspartyl ( 164) 208 55.8 7.5e-08
XP_011543568 (OMIM: 609212) PREDICTED: isoaspartyl ( 189) 208 55.9 8.4e-08
XP_011543567 (OMIM: 609212) PREDICTED: isoaspartyl ( 224) 208 55.9 9.8e-08
NP_001077395 (OMIM: 609212) isoaspartyl peptidase/ ( 308) 208 56.0 1.3e-07
NP_079356 (OMIM: 609212) isoaspartyl peptidase/L-a ( 308) 208 56.0 1.3e-07
XP_005274363 (OMIM: 609212) PREDICTED: isoaspartyl ( 180) 202 54.5 2.1e-07
XP_005274362 (OMIM: 609212) PREDICTED: isoaspartyl ( 180) 202 54.5 2.1e-07
XP_016883419 (OMIM: 608270) PREDICTED: threonine a ( 234) 167 46.6 6.4e-05
XP_016883420 (OMIM: 608270) PREDICTED: threonine a ( 225) 165 46.1 8.5e-05
XP_016883418 (OMIM: 608270) PREDICTED: threonine a ( 256) 165 46.2 9.5e-05
NP_001310531 (OMIM: 608270) threonine aspartase 1 ( 289) 162 45.5 0.00017
>>NP_000018 (OMIM: 208400,613228) N(4)-(beta-N-acetylglu (346 aa)
initn: 2347 init1: 2347 opt: 2347 Z-score: 2883.2 bits: 541.9 E(85289): 7.4e-154
Smith-Waterman score: 2347; 99.7% identity (100.0% similar) in 346 aa overlap (1-346:1-346)
10 20 30 40 50 60
pF1KB5 MARKSNLPVLLVPFLLCQALVRCSSPLPLVVNTWPFKNATEAAWRALASGGSALDAVESG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MARKSNLPVLLVPFLLCQALVRCSSPLPLVVNTWPFKNATEAAWRALASGGSALDAVESG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 CAMCEREQCDGSVGFGGSPDELGETTLDAMIMDGTTMDVGAVGDLRRIKNAIGVARKVLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 CAMCEREQCDGSVGFGGSPDELGETTLDAMIMDGTTMDVGAVGDLRRIKNAIGVARKVLE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 HTTHTLLVGESATTFAQSMGFINEDLSTSASQALHSDWLARNCQPNYWRNVIPDPSKYCG
::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
NP_000 HTTHTLLVGESATTFAQSMGFINEDLSTTASQALHSDWLARNCQPNYWRNVIPDPSKYCG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 PYKPPGILKQDIPIHKETEDDRGHDTIGMVVIHKTGHIAAGTSTNGIKFKIHGRVGDSPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 PYKPPGILKQDIPIHKETEDDRGHDTIGMVVIHKTGHIAAGTSTNGIKFKIHGRVGDSPI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 PGAGAYADDTAGAAAATGNGDILMRFLPSYQAVEYMRRGEDPTIACQKVISRIQKHFPEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 PGAGAYADDTAGAAAATGNGDILMRFLPSYQAVEYMRRGEDPTIACQKVISRIQKHFPEF
250 260 270 280 290 300
310 320 330 340
pF1KB5 FGAVICANVTGSYGAACNKLSTFTQFSFMVYNSEKNQPTEEKVDCI
::::::::::::::::::::::::::::::::::::::::::::::
NP_000 FGAVICANVTGSYGAACNKLSTFTQFSFMVYNSEKNQPTEEKVDCI
310 320 330 340
>>NP_001165459 (OMIM: 208400,613228) N(4)-(beta-N-acetyl (336 aa)
initn: 1536 init1: 1536 opt: 1537 Z-score: 1888.9 bits: 357.9 E(85289): 1.8e-98
Smith-Waterman score: 2249; 96.8% identity (97.1% similar) in 346 aa overlap (1-346:1-336)
10 20 30 40 50 60
pF1KB5 MARKSNLPVLLVPFLLCQALVRCSSPLPLVVNTWPFKNATEAAWRALASGGSALDAVESG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MARKSNLPVLLVPFLLCQALVRCSSPLPLVVNTWPFKNATEAAWRALASGGSALDAVESG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 CAMCEREQCDGSVGFGGSPDELGETTLDAMIMDGTTMDVGAVGDLRRIKNAIGVARKVLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CAMCEREQCDGSVGFGGSPDELGETTLDAMIMDGTTMDVGAVGDLRRIKNAIGVARKVLE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 HTTHTLLVGESATTFAQSMGFINEDLSTSASQALHSDWLARNCQPNYWRNVIPDPSKYCG
::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
NP_001 HTTHTLLVGESATTFAQSMGFINEDLSTTASQALHSDWLARNCQPNYWRNVIPDPSKYCG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 PYKPPGILKQDIPIHKETEDDRGHDTIGMVVIHKTGHIAAGTSTNGIKFKIHGRVGDSPI
:::::::::::::::::::::::::::::::::::::::::::::: ::::
NP_001 PYKPPGILKQDIPIHKETEDDRGHDTIGMVVIHKTGHIAAGTSTNG----------DSPI
190 200 210 220 230
250 260 270 280 290 300
pF1KB5 PGAGAYADDTAGAAAATGNGDILMRFLPSYQAVEYMRRGEDPTIACQKVISRIQKHFPEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGAGAYADDTAGAAAATGNGDILMRFLPSYQAVEYMRRGEDPTIACQKVISRIQKHFPEF
240 250 260 270 280 290
310 320 330 340
pF1KB5 FGAVICANVTGSYGAACNKLSTFTQFSFMVYNSEKNQPTEEKVDCI
::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FGAVICANVTGSYGAACNKLSTFTQFSFMVYNSEKNQPTEEKVDCI
300 310 320 330
>>NP_060184 (OMIM: 608270) threonine aspartase 1 isoform (420 aa)
initn: 153 init1: 153 opt: 274 Z-score: 336.7 bits: 71.0 E(85289): 5.1e-12
Smith-Waterman score: 274; 28.3% identity (55.5% similar) in 272 aa overlap (37-297:66-327)
10 20 30 40 50 60
pF1KB5 LPVLLVPFLLCQALVRCSSPLPLVVNTWPFKNATEAAWRALASGGSALDAVESGCAMCER
: : . : . : .:. : ::: . :. :
NP_060 YKEKRGGFVLVHAGAGYHSESKAKEYKHVCKRACQKAIEKLQAGALATDAVTA--ALVEL
40 50 60 70 80 90
70 80 90 100 110 120
pF1KB5 EQCD-GSVGFGGSPDELGETTLDAMIMDGTTMDVGAVGDLRRIKNAIGVARKVL-EHTTH
:. ..:.:.. . ::: :: :::: ... :::: : ::: ..:: ..: :
NP_060 EDSPFTNAGMGSNLNLLGEIECDASIMDGKSLNFGAVGALSGIKNPVSVANRLLCEGQKG
100 110 120 130 140 150
130 140 150 160 170 180
pF1KB5 TLLVGESATTFAQSMGFINEDLSTSASQALHSDWLARNCQPNYWRNV--IPDPSKYCGPY
: .:. : . : .. . . . .: . :: . . .
NP_060 KLSAGRIPPCFLVGEGAYRWAVDHGIPSCPPNIMTTRFSLAAFKRNKRKLELAERVDTDF
160 170 180 190 200 210
190 200 210 220 230 240
pF1KB5 KPPGILKQDIPIHKETEDDRGH-DTIGMVVIHKTGHIAAGTSTNGIKFKIHGRVGDSPIP
.:. .: :.: : ::.: ::. . :..::..:..:. .: ::::.. .
NP_060 MQLKKRRQS----SEKENDSGTLDTVGAVVVDHEGNVAAAVSSGGLALKHPGRVGQAALY
220 230 240 250 260
250 260 270 280 290
pF1KB5 GAGAYADDTAG------AAAATGNGDILMRFLPSYQAVEYMRRGEDPTIACQKVISRIQK
: : .:..:.. :....: :. :.: . . . . .. .:: : : .. .:.
NP_060 GCGCWAENTGAHNPYSTAVSTSGCGEHLVRTILARECSHALQ-AED---AHQALLETMQN
270 280 290 300 310 320
300 310 320 330 340
pF1KB5 HFPEFFGAVICANVTGSYGAACNKLSTFTQFSFMVYNSEKNQPTEEKVDCI
.:
NP_060 KFISSPFLASEDGVLGGVIVLRSCRCSAEPDSSQNKQTLLVEFLWSHTTESMCVGYMSAQ
330 340 350 360 370 380
>>XP_011527596 (OMIM: 608270) PREDICTED: threonine aspar (318 aa)
initn: 177 init1: 153 opt: 236 Z-score: 291.9 bits: 62.3 E(85289): 1.6e-09
Smith-Waterman score: 236; 27.6% identity (55.2% similar) in 232 aa overlap (76-297:2-225)
50 60 70 80 90 100
pF1KB5 ALASGGSALDAVESGCAMCEREQCDGSVGFGGSPDELGETTLDAMIMDGTTMDVGAVGDL
:.. . ::: :: :::: ... :::: :
XP_011 MGSNLNLLGEIECDASIMDGKSLNFGAVGAL
10 20 30
110 120 130 140 150 160
pF1KB5 RRIKNAIGVARKVL-EHTTHTLLVGESATTFAQSMGFINEDLSTSASQALHSDWLARNCQ
::: ..:: ..: : : .:. : . : .. . . . .:
XP_011 SGIKNPVSVANRLLCEGQKGKLSAGRIPPCFLVGEGAYRWAVDHGIPSCPPNIMTTRFSL
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB5 PNYWRNV--IPDPSKYCGPYKPPGILKQDIPIHKETEDDRGH-DTIGMVVIHKTGHIAAG
. :: . . . .:. .: :.: : ::.: ::. . :..::.
XP_011 AAFKRNKRKLELAERVDTDFMQLKKRRQS----SEKENDSGTLDTVGAVVVDHEGNVAAA
100 110 120 130 140
230 240 250 260 270
pF1KB5 TSTNGIKFKIHGRVGDSPIPGAGAYADDTAG------AAAATGNGDILMRFLPSYQAVEY
.:..:. .: ::::.. . : : .:..:.. :....: :. :.: . . . .
XP_011 VSSGGLALKHPGRVGQAALYGCGCWAENTGAHNPYSTAVSTSGCGEHLVRTILARECSHA
150 160 170 180 190 200
280 290 300 310 320 330
pF1KB5 MRRGEDPTIACQKVISRIQKHFPEFFGAVICANVTGSYGAACNKLSTFTQFSFMVYNSEK
.. .:: : : .. .:..:
XP_011 LQ-AED---AHQALLETMQNKFISSPFLASEDGVLGGVIVLRSCRCSAEPDSSQNKQTLL
210 220 230 240 250 260
>>NP_001310532 (OMIM: 608270) threonine aspartase 1 isof (318 aa)
initn: 177 init1: 153 opt: 236 Z-score: 291.9 bits: 62.3 E(85289): 1.6e-09
Smith-Waterman score: 236; 27.6% identity (55.2% similar) in 232 aa overlap (76-297:2-225)
50 60 70 80 90 100
pF1KB5 ALASGGSALDAVESGCAMCEREQCDGSVGFGGSPDELGETTLDAMIMDGTTMDVGAVGDL
:.. . ::: :: :::: ... :::: :
NP_001 MGSNLNLLGEIECDASIMDGKSLNFGAVGAL
10 20 30
110 120 130 140 150 160
pF1KB5 RRIKNAIGVARKVL-EHTTHTLLVGESATTFAQSMGFINEDLSTSASQALHSDWLARNCQ
::: ..:: ..: : : .:. : . : .. . . . .:
NP_001 SGIKNPVSVANRLLCEGQKGKLSAGRIPPCFLVGEGAYRWAVDHGIPSCPPNIMTTRFSL
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB5 PNYWRNV--IPDPSKYCGPYKPPGILKQDIPIHKETEDDRGH-DTIGMVVIHKTGHIAAG
. :: . . . .:. .: :.: : ::.: ::. . :..::.
NP_001 AAFKRNKRKLELAERVDTDFMQLKKRRQS----SEKENDSGTLDTVGAVVVDHEGNVAAA
100 110 120 130 140
230 240 250 260 270
pF1KB5 TSTNGIKFKIHGRVGDSPIPGAGAYADDTAG------AAAATGNGDILMRFLPSYQAVEY
.:..:. .: ::::.. . : : .:..:.. :....: :. :.: . . . .
NP_001 VSSGGLALKHPGRVGQAALYGCGCWAENTGAHNPYSTAVSTSGCGEHLVRTILARECSHA
150 160 170 180 190 200
280 290 300 310 320 330
pF1KB5 MRRGEDPTIACQKVISRIQKHFPEFFGAVICANVTGSYGAACNKLSTFTQFSFMVYNSEK
.. .:: : : .. .:..:
NP_001 LQ-AED---AHQALLETMQNKFISSPFLASEDGVLGGVIVLRSCRCSAEPDSSQNKQTLL
210 220 230 240 250 260
>>XP_016883417 (OMIM: 608270) PREDICTED: threonine aspar (318 aa)
initn: 177 init1: 153 opt: 236 Z-score: 291.9 bits: 62.3 E(85289): 1.6e-09
Smith-Waterman score: 236; 27.6% identity (55.2% similar) in 232 aa overlap (76-297:2-225)
50 60 70 80 90 100
pF1KB5 ALASGGSALDAVESGCAMCEREQCDGSVGFGGSPDELGETTLDAMIMDGTTMDVGAVGDL
:.. . ::: :: :::: ... :::: :
XP_016 MGSNLNLLGEIECDASIMDGKSLNFGAVGAL
10 20 30
110 120 130 140 150 160
pF1KB5 RRIKNAIGVARKVL-EHTTHTLLVGESATTFAQSMGFINEDLSTSASQALHSDWLARNCQ
::: ..:: ..: : : .:. : . : .. . . . .:
XP_016 SGIKNPVSVANRLLCEGQKGKLSAGRIPPCFLVGEGAYRWAVDHGIPSCPPNIMTTRFSL
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB5 PNYWRNV--IPDPSKYCGPYKPPGILKQDIPIHKETEDDRGH-DTIGMVVIHKTGHIAAG
. :: . . . .:. .: :.: : ::.: ::. . :..::.
XP_016 AAFKRNKRKLELAERVDTDFMQLKKRRQS----SEKENDSGTLDTVGAVVVDHEGNVAAA
100 110 120 130 140
230 240 250 260 270
pF1KB5 TSTNGIKFKIHGRVGDSPIPGAGAYADDTAG------AAAATGNGDILMRFLPSYQAVEY
.:..:. .: ::::.. . : : .:..:.. :....: :. :.: . . . .
XP_016 VSSGGLALKHPGRVGQAALYGCGCWAENTGAHNPYSTAVSTSGCGEHLVRTILARECSHA
150 160 170 180 190 200
280 290 300 310 320 330
pF1KB5 MRRGEDPTIACQKVISRIQKHFPEFFGAVICANVTGSYGAACNKLSTFTQFSFMVYNSEK
.. .:: : : .. .:..:
XP_016 LQ-AED---AHQALLETMQNKFISSPFLASEDGVLGGVIVLRSCRCSAEPDSSQNKQTLL
210 220 230 240 250 260
>>XP_011527594 (OMIM: 608270) PREDICTED: threonine aspar (318 aa)
initn: 177 init1: 153 opt: 236 Z-score: 291.9 bits: 62.3 E(85289): 1.6e-09
Smith-Waterman score: 236; 27.6% identity (55.2% similar) in 232 aa overlap (76-297:2-225)
50 60 70 80 90 100
pF1KB5 ALASGGSALDAVESGCAMCEREQCDGSVGFGGSPDELGETTLDAMIMDGTTMDVGAVGDL
:.. . ::: :: :::: ... :::: :
XP_011 MGSNLNLLGEIECDASIMDGKSLNFGAVGAL
10 20 30
110 120 130 140 150 160
pF1KB5 RRIKNAIGVARKVL-EHTTHTLLVGESATTFAQSMGFINEDLSTSASQALHSDWLARNCQ
::: ..:: ..: : : .:. : . : .. . . . .:
XP_011 SGIKNPVSVANRLLCEGQKGKLSAGRIPPCFLVGEGAYRWAVDHGIPSCPPNIMTTRFSL
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB5 PNYWRNV--IPDPSKYCGPYKPPGILKQDIPIHKETEDDRGH-DTIGMVVIHKTGHIAAG
. :: . . . .:. .: :.: : ::.: ::. . :..::.
XP_011 AAFKRNKRKLELAERVDTDFMQLKKRRQS----SEKENDSGTLDTVGAVVVDHEGNVAAA
100 110 120 130 140
230 240 250 260 270
pF1KB5 TSTNGIKFKIHGRVGDSPIPGAGAYADDTAG------AAAATGNGDILMRFLPSYQAVEY
.:..:. .: ::::.. . : : .:..:.. :....: :. :.: . . . .
XP_011 VSSGGLALKHPGRVGQAALYGCGCWAENTGAHNPYSTAVSTSGCGEHLVRTILARECSHA
150 160 170 180 190 200
280 290 300 310 320 330
pF1KB5 MRRGEDPTIACQKVISRIQKHFPEFFGAVICANVTGSYGAACNKLSTFTQFSFMVYNSEK
.. .:: : : .. .:..:
XP_011 LQ-AED---AHQALLETMQNKFISSPFLASEDGVLGGVIVLRSCRCSAEPDSSQNKQTLL
210 220 230 240 250 260
>>XP_016883416 (OMIM: 608270) PREDICTED: threonine aspar (318 aa)
initn: 177 init1: 153 opt: 236 Z-score: 291.9 bits: 62.3 E(85289): 1.6e-09
Smith-Waterman score: 236; 27.6% identity (55.2% similar) in 232 aa overlap (76-297:2-225)
50 60 70 80 90 100
pF1KB5 ALASGGSALDAVESGCAMCEREQCDGSVGFGGSPDELGETTLDAMIMDGTTMDVGAVGDL
:.. . ::: :: :::: ... :::: :
XP_016 MGSNLNLLGEIECDASIMDGKSLNFGAVGAL
10 20 30
110 120 130 140 150 160
pF1KB5 RRIKNAIGVARKVL-EHTTHTLLVGESATTFAQSMGFINEDLSTSASQALHSDWLARNCQ
::: ..:: ..: : : .:. : . : .. . . . .:
XP_016 SGIKNPVSVANRLLCEGQKGKLSAGRIPPCFLVGEGAYRWAVDHGIPSCPPNIMTTRFSL
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB5 PNYWRNV--IPDPSKYCGPYKPPGILKQDIPIHKETEDDRGH-DTIGMVVIHKTGHIAAG
. :: . . . .:. .: :.: : ::.: ::. . :..::.
XP_016 AAFKRNKRKLELAERVDTDFMQLKKRRQS----SEKENDSGTLDTVGAVVVDHEGNVAAA
100 110 120 130 140
230 240 250 260 270
pF1KB5 TSTNGIKFKIHGRVGDSPIPGAGAYADDTAG------AAAATGNGDILMRFLPSYQAVEY
.:..:. .: ::::.. . : : .:..:.. :....: :. :.: . . . .
XP_016 VSSGGLALKHPGRVGQAALYGCGCWAENTGAHNPYSTAVSTSGCGEHLVRTILARECSHA
150 160 170 180 190 200
280 290 300 310 320 330
pF1KB5 MRRGEDPTIACQKVISRIQKHFPEFFGAVICANVTGSYGAACNKLSTFTQFSFMVYNSEK
.. .:: : : .. .:..:
XP_016 LQ-AED---AHQALLETMQNKFISSPFLASEDGVLGGVIVLRSCRCSAEPDSSQNKQTLL
210 220 230 240 250 260
>>NP_001310533 (OMIM: 608270) threonine aspartase 1 isof (318 aa)
initn: 177 init1: 153 opt: 236 Z-score: 291.9 bits: 62.3 E(85289): 1.6e-09
Smith-Waterman score: 236; 27.6% identity (55.2% similar) in 232 aa overlap (76-297:2-225)
50 60 70 80 90 100
pF1KB5 ALASGGSALDAVESGCAMCEREQCDGSVGFGGSPDELGETTLDAMIMDGTTMDVGAVGDL
:.. . ::: :: :::: ... :::: :
NP_001 MGSNLNLLGEIECDASIMDGKSLNFGAVGAL
10 20 30
110 120 130 140 150 160
pF1KB5 RRIKNAIGVARKVL-EHTTHTLLVGESATTFAQSMGFINEDLSTSASQALHSDWLARNCQ
::: ..:: ..: : : .:. : . : .. . . . .:
NP_001 SGIKNPVSVANRLLCEGQKGKLSAGRIPPCFLVGEGAYRWAVDHGIPSCPPNIMTTRFSL
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB5 PNYWRNV--IPDPSKYCGPYKPPGILKQDIPIHKETEDDRGH-DTIGMVVIHKTGHIAAG
. :: . . . .:. .: :.: : ::.: ::. . :..::.
NP_001 AAFKRNKRKLELAERVDTDFMQLKKRRQS----SEKENDSGTLDTVGAVVVDHEGNVAAA
100 110 120 130 140
230 240 250 260 270
pF1KB5 TSTNGIKFKIHGRVGDSPIPGAGAYADDTAG------AAAATGNGDILMRFLPSYQAVEY
.:..:. .: ::::.. . : : .:..:.. :....: :. :.: . . . .
NP_001 VSSGGLALKHPGRVGQAALYGCGCWAENTGAHNPYSTAVSTSGCGEHLVRTILARECSHA
150 160 170 180 190 200
280 290 300 310 320 330
pF1KB5 MRRGEDPTIACQKVISRIQKHFPEFFGAVICANVTGSYGAACNKLSTFTQFSFMVYNSEK
.. .:: : : .. .:..:
NP_001 LQ-AED---AHQALLETMQNKFISSPFLASEDGVLGGVIVLRSCRCSAEPDSSQNKQTLL
210 220 230 240 250 260
>>XP_016873843 (OMIM: 609212) PREDICTED: isoaspartyl pep (164 aa)
initn: 224 init1: 159 opt: 208 Z-score: 262.0 bits: 55.8 E(85289): 7.5e-08
Smith-Waterman score: 208; 38.2% identity (69.6% similar) in 102 aa overlap (39-140:30-130)
10 20 30 40 50 60
pF1KB5 VLLVPFLLCQALVRCSSPLPLVVNTWPFKNATEAAWRALASGGSALDAVESGCAMCEREQ
:. ... : ::::.:::: : .. ...
XP_016 MNPIVVVHGGGAGPISKDRKERVHQGMVRAATVGYGILREGGSAVDAVE-GAVVALEDD
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 CDGSVGFGGSPDELGETTLDAMIMDGTTMDVGAVGDLRRIKNAIGVARKVLEHTTHTLLV
. ..: :. . ::. .:: :::: ...:::. .. : : : .:: :.:.: : .:.
XP_016 PEFNAGCGSVLNTNGEVEMDASIMDGKDLSAGAVSAVQCIANPIKLARLVMEKTPHCFLT
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB5 GESATTFAQSMGFINEDLSTSASQALHSDWLARNCQPNYWRNVIPDPSKYCGPYKPPGIL
..:. :: .::
XP_016 DQGAAQFAAAMGVPEIPGEKLVTERNKKRLEKEKHEKGAQKTDCQN
120 130 140 150 160
346 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 13:05:20 2016 done: Sat Nov 5 13:05:21 2016
Total Scan time: 7.990 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]