(Circular) (Six-base) MAPSORT of: pF1KB5544.seq Check: 2225 from: 1 to: 7448 pF1KB5544 7448 bp With 182 enzymes: SgfI * June 20, 2008 10:25 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 1188 1188 Size: 7448 AatII G_ACGT'C Cuts at: 1552 1552 Size: 7448 AccI GT'mk_AC Cuts at: 522 2896 4376 4486 522 Size: 2374 1480 110 3484 Fragments arranged by size: 3484 2374 1480 110 Acc65I G'GTAC_C Cuts at: 4464 4464 Size: 7448 AclI AA'CG_TT Cuts at: 7288 7288 Size: 7448 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 254 1490 2252 3067 3403 3503 3638 5273 5705 Size: 1236 762 815 336 100 135 1635 432 Cuts at: 5705 6452 6720 254 Size: 747 268 982 Fragments arranged by size: 1635 1236 982 815 762 747 432 336 268 135 100 AfeI AGC'GCT Cuts at: 2677 2677 Size: 7448 AflIII A'CryG_T Cuts at: 4800 5904 6881 4800 Size: 1104 977 5367 Fragments arranged by size: 5367 1104 977 AgeI A'CCGG_T Cuts at: 5836 5836 Size: 7448 AhdI GACnn_n'nnGTC Cuts at: 435 435 Size: 7448 AleI CACnn'nnGTG Cuts at: 885 2131 2618 3287 885 Size: 1246 487 669 5046 Fragments arranged by size: 5046 1246 669 487 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 262 3305 262 Size: 3043 4405 AlwNI CAG_nnn'CTG Cuts at: 411 1041 1179 4218 4417 4753 6320 411 Size: 630 138 3039 199 336 1567 1539 Fragments arranged by size: 3039 1567 1539 630 336 199 138 ApaI G_GGCC'C Cuts at: 219 1600 1799 3271 219 Size: 1381 199 1472 4396 Fragments arranged by size: 4396 1472 1381 199 ApaLI G'TGCA_C Cuts at: 3280 6218 3280 Size: 2938 4510 ApoI r'AATT_y Cuts at: 553 3763 4452 6801 7057 553 Size: 3210 689 2349 256 944 Fragments arranged by size: 3210 2349 944 689 256 AseI AT'TA_AT Cuts at: 20 2828 3725 20 Size: 2808 897 3743 Fragments arranged by size: 3743 2808 897 AsiSI GCG_AT'CGC Cuts at: 104 104 Size: 7448 AvaI C'yCGr_G Cuts at: 1530 2531 3202 3677 4468 1530 Size: 1001 671 475 791 4510 Fragments arranged by size: 4510 1001 791 671 475 BaeI ACnnnnGTAyCnnnnnnn_nnnnn' Cuts at: 852 885 3470 3503 852 Size: 33 2585 33 4797 Fragments arranged by size: 4797 2585 33 33 BamHI G'GATC_C Cuts at: 750 807 4473 750 Size: 57 3666 3725 Fragments arranged by size: 3725 3666 57 BanI G'GyrC_C Cuts at: 298 1834 3310 4464 4878 5126 5161 298 Size: 1536 1476 1154 414 248 35 2585 Fragments arranged by size: 2585 1536 1476 1154 414 248 35 BanII G_rGCy'C Cuts at: 219 589 1600 1799 1976 2627 3271 4462 5492 Size: 370 1011 199 177 651 644 1191 1030 Cuts at: 5492 219 Size: 2175 Fragments arranged by size: 2175 1191 1030 1011 651 644 370 199 177 BbeI G_GCGC'C Cuts at: 4882 5130 4882 Size: 248 7200 BbsI GAAGACnn'nnnn_ Cuts at: 431 906 1300 1529 2240 2522 2985 431 Size: 475 394 229 711 282 463 4894 Fragments arranged by size: 4894 711 475 463 394 282 229 BbvCI CC'TCA_GC Cuts at: 1734 3243 1734 Size: 1509 5939 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 90 124 1635 1669 90 Size: 34 1511 34 5869 Fragments arranged by size: 5869 1511 34 34 BciVI GTATCCnnnnn_n' Cuts at: 5346 6107 7448 5346 Size: 761 1341 5346 Fragments arranged by size: 5346 1341 761 BclI T'GATC_A Cuts at: 2766 2991 4262 4968 2766 Size: 225 1271 706 5246 Fragments arranged by size: 5246 1271 706 225 BglI GCCn_nnn'nGGC Cuts at: 1516 1627 1516 Size: 111 7337 BglII A'GATC_T Cuts at: 4963 7000 4963 Size: 2037 5411 BlpI GC'TnA_GC Cuts at: 579 4330 4560 579 Size: 3751 230 3467 Fragments arranged by size: 3751 3467 230 Bme1580I G_kGCm'C Cuts at: 219 1487 1600 1799 1837 2138 3271 3284 4197 Size: 1268 113 199 38 301 1133 13 913 Cuts at: 4197 5073 5166 6222 219 Size: 876 93 1056 1445 Fragments arranged by size: 1445 1268 1133 1056 913 876 301 199 113 93 38 13 BmgBI CAC'GTC Cuts at: 326 326 Size: 7448 BmrI ACTGGGnnnn_n' Cuts at: 294 327 570 1129 1598 4660 4741 5076 7220 Size: 33 243 559 469 3062 81 335 2144 Cuts at: 7220 294 Size: 522 Fragments arranged by size: 3062 2144 559 522 469 335 243 81 33 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 1929 5815 1929 Size: 3886 3562 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 1227 1590 1775 2285 2412 2934 4240 4301 1227 Size: 363 185 510 127 522 1306 61 4374 Fragments arranged by size: 4374 1306 522 510 363 185 127 61 Bpu10I CC'TnA_GC Cuts at: 311 1734 3243 311 Size: 1423 1509 4516 Fragments arranged by size: 4516 1509 1423 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 970 4624 5503 5995 6293 970 Size: 3654 879 492 298 2125 Fragments arranged by size: 3654 2125 879 492 298 BsaI GGTCTCn'nnnn_ Cuts at: 790 915 7152 790 Size: 125 6237 1086 Fragments arranged by size: 6237 1086 125 BsaAI yAC'GTr Cuts at: 4801 4801 Size: 7448 BsaBI GATnn'nnATC Cuts at: 6 4962 6999 6 Size: 4956 2037 455 Fragments arranged by size: 4956 2037 455 BsaHI Gr'CG_yC Cuts at: 1549 4879 5127 5829 7325 1549 Size: 3330 248 702 1496 1672 Fragments arranged by size: 3330 1672 1496 702 248 BsaWI w'CCGG_w Cuts at: 917 2571 4637 5158 5836 6110 6257 6668 917 Size: 1654 2066 521 678 274 147 411 1697 Fragments arranged by size: 2066 1697 1654 678 521 411 274 147 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 1240 1270 1282 1312 1479 1509 2385 2415 1240 Size: 30 12 30 167 30 876 30 6273 Fragments arranged by size: 6273 876 167 30 30 30 30 12 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 1593 1677 1909 1969 2167 2480 3249 3439 1593 Size: 84 232 60 198 313 769 190 5602 Fragments arranged by size: 5602 769 313 232 198 190 84 60 BseYI C'CCAG_C Cuts at: 1696 1975 4211 4873 5631 6208 6704 1696 Size: 279 2236 662 758 577 496 2440 Fragments arranged by size: 2440 2236 758 662 577 496 279 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 205 268 728 1192 3487 205 Size: 63 460 464 2295 4166 Fragments arranged by size: 4166 2295 464 460 63 BsiEI CG_ry'CG Cuts at: 104 1730 4990 5036 6244 104 Size: 1626 3260 46 1208 1308 Fragments arranged by size: 3260 1626 1308 1208 46 BsiHKAI G_wGCw'C Cuts at: 170 317 1892 2384 2627 3055 3284 3618 3678 Size: 147 1575 492 243 428 229 334 60 Cuts at: 3678 4462 5240 5430 6222 170 Size: 784 778 190 792 1396 Fragments arranged by size: 1575 1396 792 784 778 492 428 334 243 229 190 147 60 BsmI GAATG_Cn' Cuts at: 2709 2709 Size: 7448 BsmBI CGTCTCn'nnnn_ Cuts at: 1499 1997 1499 Size: 498 6950 Bsp1286I G_dGCh'C Cuts at: 170 219 317 589 1487 1600 1799 1837 1892 Size: 49 98 272 898 113 199 38 55 Cuts at: 1892 1976 2138 2384 2627 3055 3271 3284 3618 Size: 84 162 246 243 428 216 13 334 Cuts at: 3618 3678 4197 4462 5073 5166 5240 5430 5492 Size: 60 519 265 611 93 74 190 62 Cuts at: 5492 6222 170 Size: 730 1396 Fragments arranged by size: 1396 898 730 611 519 428 334 272 265 246 243 216 199 190 162 113 98 93 84 74 62 60 55 49 38 13 BspEI T'CCGG_A Cuts at: 917 2571 6668 917 Size: 1654 4097 1697 Fragments arranged by size: 4097 1697 1654 BspHI T'CATG_A Cuts at: 786 1241 4155 6624 786 Size: 455 2914 2469 1610 Fragments arranged by size: 2914 2469 1610 455 BspMI ACCTGCnnnn'nnnn_ Cuts at: 1188 4498 4712 5014 5395 1188 Size: 3310 214 302 381 3241 Fragments arranged by size: 3310 3241 381 302 214 BsrBI CCG'CTC Cuts at: 50 1884 1959 5740 5794 7278 7443 50 Size: 1834 75 3781 54 1484 165 55 Fragments arranged by size: 3781 1834 1484 165 75 55 54 BsrDI GCAATG_nn' Cuts at: 579 2372 2870 3694 3765 4331 5360 579 Size: 1793 498 824 71 566 1029 2667 Fragments arranged by size: 2667 1793 1029 824 566 498 71 BsrFI r'CCGG_y Cuts at: 1657 2092 5446 5627 5836 1657 Size: 435 3354 181 209 3269 Fragments arranged by size: 3354 3269 435 209 181 BssSI C'ACGA_G Cuts at: 223 1891 5719 6077 223 Size: 1668 3828 358 1594 Fragments arranged by size: 3828 1668 1594 358 BstAPI GCAn_nnn'nTGC Cuts at: 1041 3786 4825 1041 Size: 2745 1039 3664 Fragments arranged by size: 3664 2745 1039 BstBI TT'CG_AA Cuts at: 5809 5809 Size: 7448 BstEII G'GTnAC_C Cuts at: 1638 1938 2118 1638 Size: 300 180 6968 Fragments arranged by size: 6968 300 180 BstXI CCAn_nnnn'nTGG Cuts at: 574 574 Size: 7448 BstYI r'GATC_y Cuts at: 1 251 750 807 3238 4473 4940 4963 5298 Size: 250 499 57 2431 1235 467 23 335 Cuts at: 5298 5544 6556 6642 6654 7000 1 Size: 246 1012 86 12 346 449 Fragments arranged by size: 2431 1235 1012 499 467 449 346 335 250 246 86 57 23 12 BtgI C'CryG_G Cuts at: 704 762 974 1580 2214 704 Size: 58 212 606 634 5938 Fragments arranged by size: 5938 634 606 212 58 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 5398 5579 5742 5398 Size: 181 163 7104 Fragments arranged by size: 7104 181 163 BtsI GCAGTG_nn' Cuts at: 251 1192 2051 2699 3282 3294 4691 251 Size: 941 859 648 583 12 1397 3008 Fragments arranged by size: 3008 1397 941 859 648 583 12 CspCI CAAnnnnnGTGGnnnnnnnnnn_nn' Cuts at: 3581 3616 3581 Size: 35 7413 DraI TTT'AAA Cuts at: 4447 4447 Size: 7448 DraIII CAC_nnn'GTG Cuts at: 1706 3584 1706 Size: 1878 5570 DrdI GACnn_nn'nnGTC Cuts at: 505 5154 6012 505 Size: 4649 858 1941 Fragments arranged by size: 4649 1941 858 EaeI y'GGCC_r Cuts at: 707 1727 3001 3895 5033 5207 5598 5625 6970 Size: 1020 1274 894 1138 174 391 27 1345 Cuts at: 6970 707 Size: 1185 Fragments arranged by size: 1345 1274 1185 1138 1020 894 391 174 27 EagI C'GGCC_G Cuts at: 1727 5033 1727 Size: 3306 4142 EarI CTCTTCn'nnn_ Cuts at: 1509 1924 3043 3657 4115 5471 5681 1509 Size: 415 1119 614 458 1356 210 3276 Fragments arranged by size: 3276 1356 1119 614 458 415 210 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 1056 2093 5656 5966 6112 7258 1056 Size: 1037 3563 310 146 1146 1246 Fragments arranged by size: 3563 1246 1146 1037 310 146 EcoICRI GAG'CTC Cuts at: 2625 4460 2625 Size: 1835 5613 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 254 1227 1490 1590 1775 2252 2285 2412 2934 Size: 973 263 100 185 477 33 127 522 Cuts at: 2934 3067 3403 3503 3638 4240 4301 5273 5705 Size: 133 336 100 135 602 61 972 432 Cuts at: 5705 6452 6720 254 Size: 747 268 982 Fragments arranged by size: 982 973 972 747 602 522 477 432 336 268 263 185 135 133 127 100 100 61 33 EcoNI CCTnn'n_nnAGG Cuts at: 2300 2795 4131 2300 Size: 495 1336 5617 Fragments arranged by size: 5617 1336 495 EcoO109I rG'GnC_Cy Cuts at: 215 216 825 1597 1795 2884 3268 4587 215 Size: 1 609 772 198 1089 384 1319 3076 Fragments arranged by size: 3076 1319 1089 772 609 384 198 1 EcoRI G'AATT_C Cuts at: 4452 4452 Size: 7448 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 816 3484 4345 5467 816 Size: 2668 861 1122 2797 Fragments arranged by size: 2797 2668 1122 861 FspI TGC'GCA Cuts at: 1402 5229 1402 Size: 3827 3621 HaeII r_GCGC'y Cuts at: 2679 4882 5130 6152 7131 2679 Size: 2203 248 1022 979 2996 Fragments arranged by size: 2996 2203 1022 979 248 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 421 453 2310 2342 3153 3185 3810 3842 3950 Size: 32 1857 32 811 32 625 32 108 Cuts at: 3950 3982 5290 5320 5322 5352 421 Size: 32 1308 30 2 30 2517 Fragments arranged by size: 2517 1857 1308 811 625 108 32 32 32 32 32 30 30 2 HincII GTy'rAC Cuts at: 197 3366 3516 4487 197 Size: 3169 150 971 3158 Fragments arranged by size: 3169 3158 971 150 HpaI GTT'AAC Cuts at: 3366 3516 3366 Size: 150 7298 KasI G'GCGC_C Cuts at: 4878 5126 4878 Size: 248 7200 KpnI G_GTAC'C Cuts at: 4468 4468 Size: 7448 MluI A'CGCG_T Cuts at: 6881 6881 Size: 7448 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 1369 3437 6119 6303 1369 Size: 2068 2682 184 2514 Fragments arranged by size: 2682 2514 2068 184 MscI TGG'CCA Cuts at: 709 3003 3897 5209 709 Size: 2294 894 1312 2948 Fragments arranged by size: 2948 2294 1312 894 MslI CAynn'nnrTG Cuts at: 572 885 1162 1168 2131 2377 2507 2618 2950 Size: 313 277 6 963 246 130 111 332 Cuts at: 2950 3287 3509 3847 5437 5564 572 Size: 337 222 338 1590 127 2456 Fragments arranged by size: 2456 1590 963 338 337 332 313 277 246 222 130 127 111 6 MspA1I CmG'CkG Cuts at: 338 583 1265 2216 2263 3501 4559 4873 5233 Size: 245 682 951 47 1238 1058 314 360 Cuts at: 5233 6246 6491 338 Size: 1013 245 1295 Fragments arranged by size: 1295 1238 1058 1013 951 682 360 314 245 245 47 NaeI GCC'GGC Cuts at: 1659 2094 5629 1659 Size: 435 3535 3478 Fragments arranged by size: 3535 3478 435 NarI GG'CG_CC Cuts at: 4879 5127 4879 Size: 248 7200 NcoI C'CATG_G Cuts at: 704 1580 704 Size: 876 6572 NdeI CA'TA_TG Cuts at: 2763 2763 Size: 7448 NgoMIV G'CCGG_C Cuts at: 1657 2092 5627 1657 Size: 435 3535 3478 Fragments arranged by size: 3535 3478 435 NspI r_CATG'y Cuts at: 1401 3067 3336 4501 5001 5908 1401 Size: 1666 269 1165 500 907 2941 Fragments arranged by size: 2941 1666 1165 907 500 269 PasI CC'CwG_GG Cuts at: 843 843 Size: 7448 PciI A'CATG_T Cuts at: 5904 5904 Size: 7448 PflMI CCAn_nnn'nTGG Cuts at: 3700 3870 4218 3700 Size: 170 348 6930 Fragments arranged by size: 6930 348 170 PfoI T'CCnGG_A Cuts at: 821 1081 1204 821 Size: 260 123 7065 Fragments arranged by size: 7065 260 123 PmeI GTTT'AAAC Cuts at: 4447 4447 Size: 7448 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 401 433 3634 3666 6587 6619 401 Size: 32 3201 32 2921 32 1230 Fragments arranged by size: 3201 2921 1230 32 32 32 PpuMI rG'GwC_Cy Cuts at: 825 2884 825 Size: 2059 5389 PsiI TTA'TAA Cuts at: 3772 3772 Size: 7448 PspOMI G'GGCC_C Cuts at: 215 1596 1795 3267 215 Size: 1381 199 1472 4396 Fragments arranged by size: 4396 1472 1381 199 PspXI vC'TCGA_Gb Cuts at: 2531 3677 2531 Size: 1146 6302 PstI C_TGCA'G Cuts at: 1199 2706 3289 4495 5180 1199 Size: 1507 583 1206 685 3467 Fragments arranged by size: 3467 1507 1206 685 583 PvuI CG_AT'CG Cuts at: 104 104 Size: 7448 PvuII CAG'CTG Cuts at: 338 1265 3501 4873 5233 338 Size: 927 2236 1372 360 2553 Fragments arranged by size: 2553 2236 1372 927 360 RsrII CG'GwC_CG Cuts at: 5643 5643 Size: 7448 SacI G_AGCT'C Cuts at: 2627 4462 2627 Size: 1835 5613 SacII CC_GC'GG Cuts at: 2217 2217 Size: 7448 SalI G'TCGA_C Cuts at: 4485 4485 Size: 7448 SapI GCTCTTCn'nnn_ Cuts at: 3043 5471 5681 3043 Size: 2428 210 4810 Fragments arranged by size: 4810 2428 210 SbfI CC_TGCA'GG Cuts at: 4495 4495 Size: 7448 ScaI AGT'ACT Cuts at: 3221 6965 3221 Size: 3744 3704 SfcI C'TryA_G Cuts at: 33 1195 1260 2702 3285 4491 5176 6169 6360 Size: 1162 65 1442 583 1206 685 993 191 Cuts at: 6360 33 Size: 1121 Fragments arranged by size: 1442 1206 1162 1121 993 685 583 191 65 SfiI GGCCn_nnn'nGGCC Cuts at: 1627 1627 Size: 7448 SfoI GGC'GCC Cuts at: 4880 5128 4880 Size: 248 7200 SgfI GCG_AT'CGC Cuts at: 104 104 Size: 7448 SmaI CCC'GGG Cuts at: 4470 4470 Size: 7448 SmlI C'TyrA_G Cuts at: 949 2531 3677 4603 5518 6010 6272 949 Size: 1582 1146 926 915 492 262 2125 Fragments arranged by size: 2125 1582 1146 926 915 492 262 SpeI A'CTAG_T Cuts at: 67 67 Size: 7448 SphI G_CATG'C Cuts at: 3336 4501 5001 3336 Size: 1165 500 5783 Fragments arranged by size: 5783 1165 500 SspI AAT'ATT Cuts at: 1451 1451 Size: 7448 StuI AGG'CCT Cuts at: 1780 2102 3928 4126 4278 1780 Size: 322 1826 198 152 4950 Fragments arranged by size: 4950 1826 322 198 152 StyI C'CwwG_G Cuts at: 704 1455 1580 1781 1820 2417 2880 3134 4582 Size: 751 125 201 39 597 463 254 1448 Cuts at: 4582 4936 704 Size: 354 3216 Fragments arranged by size: 3216 1448 751 597 463 354 254 201 125 39 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 1170 1247 1251 2143 2237 2893 5031 5164 5623 Size: 77 4 892 94 656 2138 133 459 Cuts at: 5623 5832 1170 Size: 209 2786 Fragments arranged by size: 2786 2138 892 656 459 209 133 94 77 4 TatI w'GTAC_w Cuts at: 2680 3219 3431 3890 6963 2680 Size: 539 212 459 3073 3165 Fragments arranged by size: 3165 3073 539 459 212 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 1479 1511 2241 2273 2933 2965 6965 6997 1479 Size: 32 730 32 660 32 4000 32 1930 Fragments arranged by size: 4000 1930 730 660 32 32 32 32 Tth111I GACn'n_nGTC Cuts at: 991 2116 4027 5245 991 Size: 1125 1911 1218 3194 Fragments arranged by size: 3194 1911 1218 1125 XbaI T'CTAG_A Cuts at: 4479 4479 Size: 7448 XcmI CCAnnnn_n'nnnnTGG Cuts at: 1779 4943 1779 Size: 3164 4284 XhoI C'TCGA_G Cuts at: 2531 3677 2531 Size: 1146 6302 XmaI C'CCGG_G Cuts at: 4468 4468 Size: 7448 XmnI GAAnn'nnTTC Cuts at: 2552 2588 3464 3651 3805 2552 Size: 36 876 187 154 6195 Fragments arranged by size: 6195 876 187 154 36 ZraI GAC'GTC Cuts at: 1550 1550 Size: 7448 Enzymes that do cut: AarI AatII AccI Acc65I AclI AcuI AfeI AflIII AgeI AhdI AleI AlfI AlwNI ApaI ApaLI ApoI AseI AsiSI AvaI BaeI BamHI BanI BanII BbeI BbsI BbvCI BcgI BciVI BclI BglI BglII BlpI Bme1580I BmgBI BmrI BplI BpmI Bpu10I BpuEI BsaI BsaAI BsaBI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI BsmI BsmBI Bsp1286I BspEI BspHI BspMI BsrBI BsrDI BsrFI BssSI BstAPI BstBI BstEII BstXI BstYI BtgI BtgZI BtsI CspCI DraI DraIII DrdI EaeI EagI EarI EciI EcoICRI Eco57MI EcoNI EcoO109I EcoRI FalI FspI HaeII Hin4I HincII HpaI KasI KpnI MluI MmeI MscI MslI MspA1I NaeI NarI NcoI NdeI NgoMIV NspI PasI PciI PflMI PfoI PmeI PpiI PpuMI PsiI PspOMI PspXI PstI PvuI PvuII RsrII SacI SacII SalI SapI SbfI ScaI SfcI SfiI SfoI SgfI SmaI SmlI SpeI SphI SspI StuI StyI TaqII TatI TstI Tth111I XbaI XcmI XhoI XmaI XmnI ZraI Enzymes that do not cut: AflII AloI AscI AvrII BfrBI BmtI BsiWI BsrGI BssHII BstZ17I Bsu36I ClaI EcoRV FseI FspAI HindIII MfeI NheI NotI NruI NsiI PacI PmlI PshAI PsrI SanDI SexAI SgrAI SnaBI SrfI SwaI