Result of FASTA (omim) for
pF1KB5557
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5557, 464 aa
1>>>pF1KB5557 464 - 464 aa - 464 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5919+/-0.000382; mu= 17.2294+/- 0.024
mean_var=100.5939+/-19.985, 0's: 0 Z-trim(115.3): 152 B-trim: 130 in 1/50
Lambda= 0.127876
statistics sampled from 25544 (25726) to 25544 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.667), E-opt: 0.2 (0.302), width: 16
Scan time: 7.830
The best scores are: opt bits E(85289)
NP_006298 (OMIM: 300187) sushi repeat-containing p ( 464) 3218 604.4 2e-172
NP_001164221 (OMIM: 300187) sushi repeat-containin ( 444) 2863 538.9 1e-152
XP_016885382 (OMIM: 300187) PREDICTED: sushi repea ( 419) 2829 532.6 7.6e-151
NP_001164223 (OMIM: 300187) sushi repeat-containin ( 379) 2565 483.9 3.2e-136
NP_001164222 (OMIM: 300187) sushi repeat-containin ( 405) 2043 387.6 3.3e-107
NP_055282 (OMIM: 300642,300643) sushi repeat-conta ( 465) 1542 295.2 2.4e-79
XP_005245497 (OMIM: 147050,173610) PREDICTED: P-se ( 768) 239 55.1 8.1e-07
XP_005245492 (OMIM: 147050,173610) PREDICTED: P-se ( 830) 239 55.1 8.5e-07
NP_002996 (OMIM: 147050,173610) P-selectin precurs ( 830) 239 55.1 8.5e-07
XP_005245493 (OMIM: 147050,173610) PREDICTED: P-se ( 830) 239 55.1 8.5e-07
XP_005245496 (OMIM: 147050,173610) PREDICTED: P-se ( 790) 235 54.3 1.4e-06
XP_005245495 (OMIM: 147050,173610) PREDICTED: P-se ( 790) 235 54.3 1.4e-06
NP_000646 (OMIM: 153240) L-selectin precursor [Hom ( 385) 217 50.7 8.2e-06
XP_011515117 (OMIM: 608399) PREDICTED: CUB and sus (2173) 216 51.2 3.2e-05
XP_016868501 (OMIM: 608399) PREDICTED: CUB and sus (3463) 216 51.4 4.5e-05
NP_443132 (OMIM: 608399) CUB and sushi domain-cont (3538) 216 51.4 4.6e-05
XP_011515118 (OMIM: 608399) PREDICTED: CUB and sus (3603) 216 51.5 4.6e-05
NP_937757 (OMIM: 608399) CUB and sushi domain-cont (3667) 216 51.5 4.7e-05
XP_016868497 (OMIM: 608399) PREDICTED: CUB and sus (3681) 216 51.5 4.7e-05
NP_783641 (OMIM: 605886) complement component rece ( 569) 193 46.5 0.00023
NP_000441 (OMIM: 131210,145500) E-selectin precurs ( 610) 191 46.1 0.00032
XP_016868500 (OMIM: 608399) PREDICTED: CUB and sus (3507) 200 48.5 0.00035
XP_016868499 (OMIM: 608399) PREDICTED: CUB and sus (3577) 200 48.5 0.00036
XP_016868498 (OMIM: 608399) PREDICTED: CUB and sus (3637) 200 48.5 0.00036
NP_937756 (OMIM: 608399) CUB and sushi domain-cont (3707) 200 48.5 0.00036
NP_001017364 (OMIM: 120831) C4b-binding protein be ( 251) 184 44.5 0.00041
NP_001017366 (OMIM: 120831) C4b-binding protein be ( 251) 184 44.5 0.00041
NP_000707 (OMIM: 120831) C4b-binding protein beta ( 252) 184 44.5 0.00041
XP_005273311 (OMIM: 120831) PREDICTED: C4b-binding ( 252) 184 44.5 0.00041
NP_001017367 (OMIM: 120831) C4b-binding protein be ( 252) 184 44.5 0.00041
NP_001017365 (OMIM: 120831) C4b-binding protein be ( 252) 184 44.5 0.00041
NP_699197 (OMIM: 611691) sushi, von Willebrand fac (3571) 193 47.2 0.00087
XP_005273312 (OMIM: 120831) PREDICTED: C4b-binding ( 227) 176 42.9 0.0011
XP_016856597 (OMIM: 126700,134370,235400,609814,61 ( 446) 179 43.8 0.0012
NP_001014975 (OMIM: 126700,134370,235400,609814,61 ( 449) 179 43.8 0.0012
NP_000565 (OMIM: 125240,613793) complement decay-a ( 381) 178 43.5 0.0012
NP_001287833 (OMIM: 125240,613793) complement deca ( 384) 178 43.5 0.0012
XP_016855956 (OMIM: 125240,613793) PREDICTED: comp ( 412) 178 43.6 0.0013
NP_001287832 (OMIM: 125240,613793) complement deca ( 439) 178 43.6 0.0013
NP_001108224 (OMIM: 125240,613793) complement deca ( 440) 178 43.6 0.0013
NP_001287831 (OMIM: 125240,613793) complement deca ( 444) 178 43.6 0.0013
NP_060452 (OMIM: 615827) sushi domain-containing p ( 490) 176 43.3 0.0018
XP_016857077 (OMIM: 615827) PREDICTED: sushi domai ( 490) 176 43.3 0.0018
XP_016857076 (OMIM: 615827) PREDICTED: sushi domai ( 490) 176 43.3 0.0018
XP_016857073 (OMIM: 615827) PREDICTED: sushi domai ( 562) 176 43.3 0.002
NP_000564 (OMIM: 120620,607486,611162) complement (2039) 183 45.1 0.0021
XP_006711229 (OMIM: 120620,607486,611162) PREDICTE (2459) 183 45.2 0.0024
NP_000642 (OMIM: 120620,607486,611162) complement (2489) 183 45.2 0.0024
XP_011507507 (OMIM: 120620,607486,611162) PREDICTE (2554) 183 45.2 0.0025
XP_011507586 (OMIM: 134580,613235) PREDICTED: coag ( 675) 172 42.7 0.0039
>>NP_006298 (OMIM: 300187) sushi repeat-containing prote (464 aa)
initn: 3218 init1: 3218 opt: 3218 Z-score: 3216.4 bits: 604.4 E(85289): 2e-172
Smith-Waterman score: 3218; 100.0% identity (100.0% similar) in 464 aa overlap (1-464:1-464)
10 20 30 40 50 60
pF1KB5 MGSPAHRPALLLLLPPLLLLLLLRVPPSRSFPGSGDSPLEDDEVGYSHPRYKDTPWCSPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MGSPAHRPALLLLLPPLLLLLLLRVPPSRSFPGSGDSPLEDDEVGYSHPRYKDTPWCSPI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 KVKYGDVYCRAPQGGYYKTALGTRCDIRCQKGYELHGSSLLICQSNKRWSDKVICKQKRC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 KVKYGDVYCRAPQGGYYKTALGTRCDIRCQKGYELHGSSLLICQSNKRWSDKVICKQKRC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 PTLAMPANGGFKCVDGAYFNSRCEYYCSPGYTLKGERTVTCMDNKAWSGRPASCVDMEPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 PTLAMPANGGFKCVDGAYFNSRCEYYCSPGYTLKGERTVTCMDNKAWSGRPASCVDMEPP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 RIKCPSVKERIAEPNKLTVRVSWETPEGRDTADGILTDVILKGLPPGSNFPEGDHKIQYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 RIKCPSVKERIAEPNKLTVRVSWETPEGRDTADGILTDVILKGLPPGSNFPEGDHKIQYT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 VYDRAENKGTCKFRVKVRVKRCGKLNAPENGYMKCSSDGDNYGATCEFSCIGGYELQGSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 VYDRAENKGTCKFRVKVRVKRCGKLNAPENGYMKCSSDGDNYGATCEFSCIGGYELQGSP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 ARVCQSNLAWSGTEPTCAAMNVNVGVRTAAALLDQFYEKRRLLIVSTPTARNLLYRLQLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 ARVCQSNLAWSGTEPTCAAMNVNVGVRTAAALLDQFYEKRRLLIVSTPTARNLLYRLQLG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 MLQQAQCGLDLRHITVVELVGVFPTLIGRIGAKIMPPALALQLRLLLRIPLYSFSMVLVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MLQQAQCGLDLRHITVVELVGVFPTLIGRIGAKIMPPALALQLRLLLRIPLYSFSMVLVD
370 380 390 400 410 420
430 440 450 460
pF1KB5 KHGMDKERYVSLVMPVALFNLIDTFPLRKEEMVLQAEMSQTCNT
::::::::::::::::::::::::::::::::::::::::::::
NP_006 KHGMDKERYVSLVMPVALFNLIDTFPLRKEEMVLQAEMSQTCNT
430 440 450 460
>>NP_001164221 (OMIM: 300187) sushi repeat-containing pr (444 aa)
initn: 2902 init1: 2863 opt: 2863 Z-score: 2862.7 bits: 538.9 E(85289): 1e-152
Smith-Waterman score: 3024; 95.7% identity (95.7% similar) in 464 aa overlap (1-464:1-444)
10 20 30 40 50 60
pF1KB5 MGSPAHRPALLLLLPPLLLLLLLRVPPSRSFPGSGDSPLEDDEVGYSHPRYKDTPWCSPI
:::::::::::::::::::::::::::::::: ::::::::
NP_001 MGSPAHRPALLLLLPPLLLLLLLRVPPSRSFP--------------------DTPWCSPI
10 20 30 40
70 80 90 100 110 120
pF1KB5 KVKYGDVYCRAPQGGYYKTALGTRCDIRCQKGYELHGSSLLICQSNKRWSDKVICKQKRC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KVKYGDVYCRAPQGGYYKTALGTRCDIRCQKGYELHGSSLLICQSNKRWSDKVICKQKRC
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB5 PTLAMPANGGFKCVDGAYFNSRCEYYCSPGYTLKGERTVTCMDNKAWSGRPASCVDMEPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PTLAMPANGGFKCVDGAYFNSRCEYYCSPGYTLKGERTVTCMDNKAWSGRPASCVDMEPP
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB5 RIKCPSVKERIAEPNKLTVRVSWETPEGRDTADGILTDVILKGLPPGSNFPEGDHKIQYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RIKCPSVKERIAEPNKLTVRVSWETPEGRDTADGILTDVILKGLPPGSNFPEGDHKIQYT
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB5 VYDRAENKGTCKFRVKVRVKRCGKLNAPENGYMKCSSDGDNYGATCEFSCIGGYELQGSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VYDRAENKGTCKFRVKVRVKRCGKLNAPENGYMKCSSDGDNYGATCEFSCIGGYELQGSP
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB5 ARVCQSNLAWSGTEPTCAAMNVNVGVRTAAALLDQFYEKRRLLIVSTPTARNLLYRLQLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARVCQSNLAWSGTEPTCAAMNVNVGVRTAAALLDQFYEKRRLLIVSTPTARNLLYRLQLG
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB5 MLQQAQCGLDLRHITVVELVGVFPTLIGRIGAKIMPPALALQLRLLLRIPLYSFSMVLVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLQQAQCGLDLRHITVVELVGVFPTLIGRIGAKIMPPALALQLRLLLRIPLYSFSMVLVD
350 360 370 380 390 400
430 440 450 460
pF1KB5 KHGMDKERYVSLVMPVALFNLIDTFPLRKEEMVLQAEMSQTCNT
::::::::::::::::::::::::::::::::::::::::::::
NP_001 KHGMDKERYVSLVMPVALFNLIDTFPLRKEEMVLQAEMSQTCNT
410 420 430 440
>>XP_016885382 (OMIM: 300187) PREDICTED: sushi repeat-co (419 aa)
initn: 3093 init1: 2827 opt: 2829 Z-score: 2829.1 bits: 532.6 E(85289): 7.6e-151
Smith-Waterman score: 2829; 97.1% identity (98.1% similar) in 417 aa overlap (1-417:1-417)
10 20 30 40 50 60
pF1KB5 MGSPAHRPALLLLLPPLLLLLLLRVPPSRSFPGSGDSPLEDDEVGYSHPRYKDTPWCSPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGSPAHRPALLLLLPPLLLLLLLRVPPSRSFPGSGDSPLEDDEVGYSHPRYKDTPWCSPI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 KVKYGDVYCRAPQGGYYKTALGTRCDIRCQKGYELHGSSLLICQSNKRWSDKVICKQKRC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KVKYGDVYCRAPQGGYYKTALGTRCDIRCQKGYELHGSSLLICQSNKRWSDKVICKQKRC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 PTLAMPANGGFKCVDGAYFNSRCEYYCSPGYTLKGERTVTCMDNKAWSGRPASCVDMEPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PTLAMPANGGFKCVDGAYFNSRCEYYCSPGYTLKGERTVTCMDNKAWSGRPASCVDMEPP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 RIKCPSVKERIAEPNKLTVRVSWETPEGRDTADGILTDVILKGLPPGSNFPEGDHKIQYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RIKCPSVKERIAEPNKLTVRVSWETPEGRDTADGILTDVILKGLPPGSNFPEGDHKIQYT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 VYDRAENKGTCKFRVKVRVKRCGKLNAPENGYMKCSSDGDNYGATCEFSCIGGYELQGSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VYDRAENKGTCKFRVKVRVKRCGKLNAPENGYMKCSSDGDNYGATCEFSCIGGYELQGSP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 ARVCQSNLAWSGTEPTCAAMNVNVGVRTAAALLDQFYEKRRLLIVSTPTARNLLYRLQLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ARVCQSNLAWSGTEPTCAAMNVNVGVRTAAALLDQFYEKRRLLIVSTPTARNLLYRLQLG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 MLQQAQCGLDLRHITVVELVGVFPTLIGRIGAKIMPPALALQLRLLLRIPLYSFSMVLVD
::::::::::::::::::::::::::::::::::::::::::: .. : . .:
XP_016 MLQQAQCGLDLRHITVVELVGVFPTLIGRIGAKIMPPALALQLSFITLTKLEPWILVSE
370 380 390 400 410
430 440 450 460
pF1KB5 KHGMDKERYVSLVMPVALFNLIDTFPLRKEEMVLQAEMSQTCNT
>>NP_001164223 (OMIM: 300187) sushi repeat-containing pr (379 aa)
initn: 2565 init1: 2565 opt: 2565 Z-score: 2566.5 bits: 483.9 E(85289): 3.2e-136
Smith-Waterman score: 2565; 100.0% identity (100.0% similar) in 363 aa overlap (1-363:1-363)
10 20 30 40 50 60
pF1KB5 MGSPAHRPALLLLLPPLLLLLLLRVPPSRSFPGSGDSPLEDDEVGYSHPRYKDTPWCSPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGSPAHRPALLLLLPPLLLLLLLRVPPSRSFPGSGDSPLEDDEVGYSHPRYKDTPWCSPI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 KVKYGDVYCRAPQGGYYKTALGTRCDIRCQKGYELHGSSLLICQSNKRWSDKVICKQKRC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KVKYGDVYCRAPQGGYYKTALGTRCDIRCQKGYELHGSSLLICQSNKRWSDKVICKQKRC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 PTLAMPANGGFKCVDGAYFNSRCEYYCSPGYTLKGERTVTCMDNKAWSGRPASCVDMEPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PTLAMPANGGFKCVDGAYFNSRCEYYCSPGYTLKGERTVTCMDNKAWSGRPASCVDMEPP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 RIKCPSVKERIAEPNKLTVRVSWETPEGRDTADGILTDVILKGLPPGSNFPEGDHKIQYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RIKCPSVKERIAEPNKLTVRVSWETPEGRDTADGILTDVILKGLPPGSNFPEGDHKIQYT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 VYDRAENKGTCKFRVKVRVKRCGKLNAPENGYMKCSSDGDNYGATCEFSCIGGYELQGSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VYDRAENKGTCKFRVKVRVKRCGKLNAPENGYMKCSSDGDNYGATCEFSCIGGYELQGSP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 ARVCQSNLAWSGTEPTCAAMNVNVGVRTAAALLDQFYEKRRLLIVSTPTARNLLYRLQLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARVCQSNLAWSGTEPTCAAMNVNVGVRTAAALLDQFYEKRRLLIVSTPTARNLLYRLQLG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 MLQQAQCGLDLRHITVVELVGVFPTLIGRIGAKIMPPALALQLRLLLRIPLYSFSMVLVD
:::
NP_001 MLQAVAANPTLLLQYGASG
370
>>NP_001164222 (OMIM: 300187) sushi repeat-containing pr (405 aa)
initn: 2070 init1: 1943 opt: 2043 Z-score: 2045.7 bits: 387.6 E(85289): 3.3e-107
Smith-Waterman score: 2642; 87.1% identity (87.3% similar) in 464 aa overlap (1-464:1-405)
10 20 30 40 50 60
pF1KB5 MGSPAHRPALLLLLPPLLLLLLLRVPPSRSFPGSGDSPLEDDEVGYSHPRYKDTPWCSPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGSPAHRPALLLLLPPLLLLLLLRVPPSRSFPGSGDSPLEDDEVGYSHPRYKDTPWCSPI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 KVKYGDVYCRAPQGGYYKTALGTRCDIRCQKGYELHGSSLLICQSNKRWSDKVICKQKRC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
NP_001 KVKYGDVYCRAPQGGYYKTALGTRCDIRCQKGYELHGSSLLICQSNKRWSDKVICKH---
70 80 90 100 110
130 140 150 160 170 180
pF1KB5 PTLAMPANGGFKCVDGAYFNSRCEYYCSPGYTLKGERTVTCMDNKAWSGRPASCVDMEPP
::::
NP_001 --------------------------------------------------------MEPP
120
190 200 210 220 230 240
pF1KB5 RIKCPSVKERIAEPNKLTVRVSWETPEGRDTADGILTDVILKGLPPGSNFPEGDHKIQYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RIKCPSVKERIAEPNKLTVRVSWETPEGRDTADGILTDVILKGLPPGSNFPEGDHKIQYT
130 140 150 160 170 180
250 260 270 280 290 300
pF1KB5 VYDRAENKGTCKFRVKVRVKRCGKLNAPENGYMKCSSDGDNYGATCEFSCIGGYELQGSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VYDRAENKGTCKFRVKVRVKRCGKLNAPENGYMKCSSDGDNYGATCEFSCIGGYELQGSP
190 200 210 220 230 240
310 320 330 340 350 360
pF1KB5 ARVCQSNLAWSGTEPTCAAMNVNVGVRTAAALLDQFYEKRRLLIVSTPTARNLLYRLQLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARVCQSNLAWSGTEPTCAAMNVNVGVRTAAALLDQFYEKRRLLIVSTPTARNLLYRLQLG
250 260 270 280 290 300
370 380 390 400 410 420
pF1KB5 MLQQAQCGLDLRHITVVELVGVFPTLIGRIGAKIMPPALALQLRLLLRIPLYSFSMVLVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLQQAQCGLDLRHITVVELVGVFPTLIGRIGAKIMPPALALQLRLLLRIPLYSFSMVLVD
310 320 330 340 350 360
430 440 450 460
pF1KB5 KHGMDKERYVSLVMPVALFNLIDTFPLRKEEMVLQAEMSQTCNT
::::::::::::::::::::::::::::::::::::::::::::
NP_001 KHGMDKERYVSLVMPVALFNLIDTFPLRKEEMVLQAEMSQTCNT
370 380 390 400
>>NP_055282 (OMIM: 300642,300643) sushi repeat-containin (465 aa)
initn: 1747 init1: 1521 opt: 1542 Z-score: 1545.4 bits: 295.2 E(85289): 2.4e-79
Smith-Waterman score: 1542; 45.9% identity (73.1% similar) in 453 aa overlap (17-462:13-464)
10 20 30 40 50
pF1KB5 MGSPAHRPALLLLLPPLLLLLLLRVPPSRSFPGSGDSPLEDDEVGYSH--PR-----YKD
::..: : :. . ::: : :. . :.. :. :.
NP_055 MASQLTQRGALFLLFFLTPAVTPTW-YAGSGYYPDESYNEVYAEEVPQAPALDYRV
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 TPWCSPIKVKYGDVYCRAPQGGYYKTALGTRCDIRCQKGYELHGSSLLICQSNKRWSDKV
:: .... :.. : .:.:: :...:::::.. :..:..: : . : ..::: .
NP_055 PRWCYTLNIQDGEATCYSPKGGNYHSSLGTRCELSCDRGFRLIGRRSVQCLPSRRWSGTA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 ICKQKRCPTLAMPANGGFKCVDGAYFNSRCEYYCSPGYTLKGERTVTCMDNKAWSGRPAS
:.: :: .: . ..: . :..:. ..:::.: :: :: :.:.:. ::.. :::
NP_055 YCRQMRCHALPFITSGTYTCTNGVLLDSRCDYSCSSGYHLEGDRSRICMEDGRWSGGEPV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 CVDMEPPRIKCPSVKERIAEPNKLTVRVSWETPEGRDTADGILTDVILKGLPPGSNFPEG
:::..::.:.:: .:..:::.:::.:: :. : .:.::: .: : :.: :::.::::
NP_055 CVDIDPPKIRCPHSREKMAEPEKLTARVYWDPPLVKDSADGTITRVTLRGPEPGSHFPEG
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 DHKIQYTVYDRAENKGTCKFRVKVRVKRCGKLNAPENGYMKCSSDGDNYGATCEFSCIGG
.: :.::.:::: :...::: :::.:.:: :. :..::. :.: :::::::::. : ::
NP_055 EHVIRYTAYDRAYNRASCKFIVKVQVRRCPTLKPPQHGYLTCTSAGDNYGATCEYHCDGG
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 YELQGSPARVCQSNLAWSGTEPTCAAMNVNVGVRTAAALLDQFYEKRRLLIVSTPTARNL
:. ::.:.:::::. :::. : :: :..::.: .::.::::::::.::::.:.: :
NP_055 YDRQGTPSRVCQSSRQWSGSPPICAPMKINVNVNSAAGLLDQFYEKQRLLIISAPDPSNR
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB5 LYRLQLGMLQQAQCGLDLRHITVVELVGVFPTLIGRIGAKIMPPALALQLRLLLRIPLYS
:..:..::::. :::::::.:..:::: : .::: . . . .:: . :.
NP_055 YYKMQISMLQQSTCGLDLRHVTIIELVGQPPQEVGRIREQQLSANIIEELRQFQRLTRSY
360 370 380 390 400 410
420 430 440 450 460
pF1KB5 FSMVLVDKHGMDKERYVSLVMPVALFNLIDTFPLRKEEMVLQAEMSQTCNT
:.:::.::.:.:..::. : : .:..:: . : ..:.. . :. . :
NP_055 FNMVLIDKQGIDRDRYMEPVTPEEIFTFIDDYLLSNQELTQRREQRDICE
420 430 440 450 460
>>XP_005245497 (OMIM: 147050,173610) PREDICTED: P-select (768 aa)
initn: 293 init1: 138 opt: 239 Z-score: 243.4 bits: 55.1 E(85289): 8.1e-07
Smith-Waterman score: 413; 29.6% identity (52.1% similar) in 284 aa overlap (49-319:441-701)
20 30 40 50 60 70
pF1KB5 LLLLLRVPPSRSFPGSGDSPLEDDEVGYSHPRYKDTPWCSPI-KVKYGDVYCRAPQGGYY
:. . : :.:. . . : . : : :.
XP_005 VCSFTCNEGLLLVGASVLQCLATGNWNSVPPECQAIP-CTPLLSPQNGTMTCVQPLGS--
420 430 440 450 460
80 90 100 110 120 130
pF1KB5 KTALGTRCDIRCQKGYELHGSSLLICQSNKRWSDKV-ICKQKRCPTLAMPANGGFKCVDG
.. . :.. :..:: : : : : . ::.:. .:. .:: : : .:.. : :
XP_005 -SSYKSTCQFICDEGYSLSGPERLDCTRSGRWTDSPPMCEAIKCPELFAPEQGSLDCSDT
470 480 490 500 510 520
140 150 160 170 180 190
pF1KB5 -AYFN--SRCEYYCSPGYTLKGERTVTCMDNKAWSGRPASC---VDMEPPRIKCPSVKER
. :: : :.. :. :. :.: .: : . ::. : .: ... : ..::.
XP_005 RGEFNVGSTCHFSCDNGFKLEGPNNVECTTSGRWSATPPTCKGIASLPTPGVQCPA----
530 540 550 560 570 580
200 210 220 230 240
pF1KB5 IAEPNKLTVRVSWETPE-GRDTAD--GILTDVILKGLPPGSNFPEGDHKIQYTVYDRAEN
.. :.. :. . : .:. : . : : : : : :.:. :
XP_005 LTTPGQGTMYCRHHPGTFGFNTTCYFGCNAGFTLIGDSTLSCRPSG----QWTAVTPA--
590 600 610 620 630
250 260 270 280 290 300
pF1KB5 KGTCKFRVKVRVKRCGKLNAPENGYMKCSSDGDN--YGATCEFSCIGGYELQGSPARVCQ
: :. .:..:.. . :.::. : ::. : : :. : :.:: .::
XP_005 ---C------RAVKCSELHVNKPIAMNCSNLWGNFSYGSICSFHCLEGQLLNGSAQTACQ
640 650 660 670 680
310 320 330 340 350 360
pF1KB5 SNLAWSGTEPTCAAMNVNVGVRTAAALLDQFYEKRRLLIVSTPTARNLLYRLQLGMLQQA
: :: : ::: :
XP_005 ENGHWSTTVPTCQAGPLTIQEALTYFGGAVASTIGLIMGGTLLALLRKRFRQKDDGKCPL
690 700 710 720 730 740
>>XP_005245492 (OMIM: 147050,173610) PREDICTED: P-select (830 aa)
initn: 443 init1: 138 opt: 239 Z-score: 243.0 bits: 55.1 E(85289): 8.5e-07
Smith-Waterman score: 413; 29.6% identity (52.1% similar) in 284 aa overlap (49-319:503-763)
20 30 40 50 60 70
pF1KB5 LLLLLRVPPSRSFPGSGDSPLEDDEVGYSHPRYKDTPWCSPI-KVKYGDVYCRAPQGGYY
:. . : :.:. . . : . : : :.
XP_005 VCSFTCNEGLLLVGASVLQCLATGNWNSVPPECQAIP-CTPLLSPQNGTMTCVQPLGS--
480 490 500 510 520
80 90 100 110 120 130
pF1KB5 KTALGTRCDIRCQKGYELHGSSLLICQSNKRWSDKV-ICKQKRCPTLAMPANGGFKCVDG
.. . :.. :..:: : : : : . ::.:. .:. .:: : : .:.. : :
XP_005 -SSYKSTCQFICDEGYSLSGPERLDCTRSGRWTDSPPMCEAIKCPELFAPEQGSLDCSDT
530 540 550 560 570 580
140 150 160 170 180 190
pF1KB5 -AYFN--SRCEYYCSPGYTLKGERTVTCMDNKAWSGRPASC---VDMEPPRIKCPSVKER
. :: : :.. :. :. :.: .: : . ::. : .: ... : ..::.
XP_005 RGEFNVGSTCHFSCDNGFKLEGPNNVECTTSGRWSATPPTCKGIASLPTPGVQCPA----
590 600 610 620 630 640
200 210 220 230 240
pF1KB5 IAEPNKLTVRVSWETPE-GRDTAD--GILTDVILKGLPPGSNFPEGDHKIQYTVYDRAEN
.. :.. :. . : .:. : . : : : : : :.:. :
XP_005 LTTPGQGTMYCRHHPGTFGFNTTCYFGCNAGFTLIGDSTLSCRPSG----QWTAVTPA--
650 660 670 680 690
250 260 270 280 290 300
pF1KB5 KGTCKFRVKVRVKRCGKLNAPENGYMKCSSDGDN--YGATCEFSCIGGYELQGSPARVCQ
: :. .:..:.. . :.::. : ::. : : :. : :.:: .::
XP_005 ---C------RAVKCSELHVNKPIAMNCSNLWGNFSYGSICSFHCLEGQLLNGSAQTACQ
700 710 720 730 740
310 320 330 340 350 360
pF1KB5 SNLAWSGTEPTCAAMNVNVGVRTAAALLDQFYEKRRLLIVSTPTARNLLYRLQLGMLQQA
: :: : ::: :
XP_005 ENGHWSTTVPTCQAGPLTIQEALTYFGGAVASTIGLIMGGTLLALLRKRFRQKDDGKCPL
750 760 770 780 790 800
>>NP_002996 (OMIM: 147050,173610) P-selectin precursor [ (830 aa)
initn: 443 init1: 138 opt: 239 Z-score: 243.0 bits: 55.1 E(85289): 8.5e-07
Smith-Waterman score: 413; 29.6% identity (52.1% similar) in 284 aa overlap (49-319:503-763)
20 30 40 50 60 70
pF1KB5 LLLLLRVPPSRSFPGSGDSPLEDDEVGYSHPRYKDTPWCSPI-KVKYGDVYCRAPQGGYY
:. . : :.:. . . : . : : :.
NP_002 VCSFTCNEGLLLVGASVLQCLATGNWNSVPPECQAIP-CTPLLSPQNGTMTCVQPLGS--
480 490 500 510 520
80 90 100 110 120 130
pF1KB5 KTALGTRCDIRCQKGYELHGSSLLICQSNKRWSDKV-ICKQKRCPTLAMPANGGFKCVDG
.. . :.. :..:: : : : : . ::.:. .:. .:: : : .:.. : :
NP_002 -SSYKSTCQFICDEGYSLSGPERLDCTRSGRWTDSPPMCEAIKCPELFAPEQGSLDCSDT
530 540 550 560 570 580
140 150 160 170 180 190
pF1KB5 -AYFN--SRCEYYCSPGYTLKGERTVTCMDNKAWSGRPASC---VDMEPPRIKCPSVKER
. :: : :.. :. :. :.: .: : . ::. : .: ... : ..::.
NP_002 RGEFNVGSTCHFSCDNGFKLEGPNNVECTTSGRWSATPPTCKGIASLPTPGVQCPA----
590 600 610 620 630 640
200 210 220 230 240
pF1KB5 IAEPNKLTVRVSWETPE-GRDTAD--GILTDVILKGLPPGSNFPEGDHKIQYTVYDRAEN
.. :.. :. . : .:. : . : : : : : :.:. :
NP_002 LTTPGQGTMYCRHHPGTFGFNTTCYFGCNAGFTLIGDSTLSCRPSG----QWTAVTPA--
650 660 670 680 690
250 260 270 280 290 300
pF1KB5 KGTCKFRVKVRVKRCGKLNAPENGYMKCSSDGDN--YGATCEFSCIGGYELQGSPARVCQ
: :. .:..:.. . :.::. : ::. : : :. : :.:: .::
NP_002 ---C------RAVKCSELHVNKPIAMNCSNLWGNFSYGSICSFHCLEGQLLNGSAQTACQ
700 710 720 730 740
310 320 330 340 350 360
pF1KB5 SNLAWSGTEPTCAAMNVNVGVRTAAALLDQFYEKRRLLIVSTPTARNLLYRLQLGMLQQA
: :: : ::: :
NP_002 ENGHWSTTVPTCQAGPLTIQEALTYFGGAVASTIGLIMGGTLLALLRKRFRQKDDGKCPL
750 760 770 780 790 800
>>XP_005245493 (OMIM: 147050,173610) PREDICTED: P-select (830 aa)
initn: 443 init1: 138 opt: 239 Z-score: 243.0 bits: 55.1 E(85289): 8.5e-07
Smith-Waterman score: 413; 29.6% identity (52.1% similar) in 284 aa overlap (49-319:503-763)
20 30 40 50 60 70
pF1KB5 LLLLLRVPPSRSFPGSGDSPLEDDEVGYSHPRYKDTPWCSPI-KVKYGDVYCRAPQGGYY
:. . : :.:. . . : . : : :.
XP_005 VCSFTCNEGLLLVGASVLQCLATGNWNSVPPECQAIP-CTPLLSPQNGTMTCVQPLGS--
480 490 500 510 520
80 90 100 110 120 130
pF1KB5 KTALGTRCDIRCQKGYELHGSSLLICQSNKRWSDKV-ICKQKRCPTLAMPANGGFKCVDG
.. . :.. :..:: : : : : . ::.:. .:. .:: : : .:.. : :
XP_005 -SSYKSTCQFICDEGYSLSGPERLDCTRSGRWTDSPPMCEAIKCPELFAPEQGSLDCSDT
530 540 550 560 570 580
140 150 160 170 180 190
pF1KB5 -AYFN--SRCEYYCSPGYTLKGERTVTCMDNKAWSGRPASC---VDMEPPRIKCPSVKER
. :: : :.. :. :. :.: .: : . ::. : .: ... : ..::.
XP_005 RGEFNVGSTCHFSCDNGFKLEGPNNVECTTSGRWSATPPTCKGIASLPTPGVQCPA----
590 600 610 620 630 640
200 210 220 230 240
pF1KB5 IAEPNKLTVRVSWETPE-GRDTAD--GILTDVILKGLPPGSNFPEGDHKIQYTVYDRAEN
.. :.. :. . : .:. : . : : : : : :.:. :
XP_005 LTTPGQGTMYCRHHPGTFGFNTTCYFGCNAGFTLIGDSTLSCRPSG----QWTAVTPA--
650 660 670 680 690
250 260 270 280 290 300
pF1KB5 KGTCKFRVKVRVKRCGKLNAPENGYMKCSSDGDN--YGATCEFSCIGGYELQGSPARVCQ
: :. .:..:.. . :.::. : ::. : : :. : :.:: .::
XP_005 ---C------RAVKCSELHVNKPIAMNCSNLWGNFSYGSICSFHCLEGQLLNGSAQTACQ
700 710 720 730 740
310 320 330 340 350 360
pF1KB5 SNLAWSGTEPTCAAMNVNVGVRTAAALLDQFYEKRRLLIVSTPTARNLLYRLQLGMLQQA
: :: : ::: :
XP_005 ENGHWSTTVPTCQAGPLTIQEALTYFGGAVASTIGLIMGGTLLALLRKRFRQKDDGKCPL
750 760 770 780 790 800
464 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 13:05:52 2016 done: Sat Nov 5 13:05:54 2016
Total Scan time: 7.830 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]