Result of FASTA (omim) for
pF1KB5588
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5588, 725 aa
1>>>pF1KB5588 725 - 725 aa - 725 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7245+/-0.000393; mu= 19.0164+/- 0.025
mean_var=89.5242+/-18.260, 0's: 0 Z-trim(114.0): 56 B-trim: 466 in 1/53
Lambda= 0.135551
statistics sampled from 23488 (23544) to 23488 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.639), E-opt: 0.2 (0.276), width: 16
Scan time: 6.990
The best scores are: opt bits E(85289)
NP_037434 (OMIM: 606968) eukaryotic elongation fac ( 725) 4967 981.9 0
XP_016878682 (OMIM: 606968) PREDICTED: eukaryotic ( 725) 4961 980.8 0
XP_016878683 (OMIM: 606968) PREDICTED: eukaryotic ( 704) 3177 631.9 2.6e-180
XP_016864139 (OMIM: 607347) PREDICTED: alpha-prote (1037) 270 63.5 4.9e-09
XP_016864140 (OMIM: 607347) PREDICTED: alpha-prote (1037) 270 63.5 4.9e-09
XP_016864138 (OMIM: 607347) PREDICTED: alpha-prote (1043) 270 63.5 4.9e-09
NP_001240813 (OMIM: 607347) alpha-protein kinase 1 (1166) 270 63.6 5.3e-09
XP_016864136 (OMIM: 607347) PREDICTED: alpha-prote (1173) 270 63.6 5.3e-09
XP_016864137 (OMIM: 607347) PREDICTED: alpha-prote (1173) 270 63.6 5.3e-09
XP_016864135 (OMIM: 607347) PREDICTED: alpha-prote (1210) 270 63.6 5.5e-09
XP_016864134 (OMIM: 607347) PREDICTED: alpha-prote (1224) 270 63.6 5.5e-09
XP_006714389 (OMIM: 607347) PREDICTED: alpha-prote (1225) 270 63.6 5.5e-09
XP_016864133 (OMIM: 607347) PREDICTED: alpha-prote (1228) 270 63.6 5.5e-09
XP_016864132 (OMIM: 607347) PREDICTED: alpha-prote (1231) 270 63.6 5.5e-09
NP_001095876 (OMIM: 607347) alpha-protein kinase 1 (1244) 270 63.6 5.6e-09
NP_079420 (OMIM: 607347) alpha-protein kinase 1 is (1244) 270 63.6 5.6e-09
XP_005263302 (OMIM: 607347) PREDICTED: alpha-prote (1245) 270 63.6 5.6e-09
XP_005263303 (OMIM: 607347) PREDICTED: alpha-prote (1245) 270 63.6 5.6e-09
XP_016864131 (OMIM: 607347) PREDICTED: alpha-prote (1250) 270 63.6 5.6e-09
XP_016864126 (OMIM: 607347) PREDICTED: alpha-prote (1251) 270 63.6 5.6e-09
XP_016864125 (OMIM: 607347) PREDICTED: alpha-prote (1251) 270 63.6 5.6e-09
XP_016864128 (OMIM: 607347) PREDICTED: alpha-prote (1251) 270 63.6 5.6e-09
XP_016864127 (OMIM: 607347) PREDICTED: alpha-prote (1251) 270 63.6 5.6e-09
XP_016864130 (OMIM: 607347) PREDICTED: alpha-prote (1251) 270 63.6 5.6e-09
XP_016864124 (OMIM: 607347) PREDICTED: alpha-prote (1251) 270 63.6 5.6e-09
XP_016864129 (OMIM: 607347) PREDICTED: alpha-prote (1251) 270 63.6 5.6e-09
XP_016864123 (OMIM: 607347) PREDICTED: alpha-prote (1251) 270 63.6 5.6e-09
XP_016864122 (OMIM: 607347) PREDICTED: alpha-prote (1251) 270 63.6 5.6e-09
XP_011516553 (OMIM: 602014,607009) PREDICTED: tran (1779) 226 55.1 2.9e-06
XP_016869777 (OMIM: 602014,607009) PREDICTED: tran (1852) 226 55.1 3e-06
XP_016869776 (OMIM: 602014,607009) PREDICTED: tran (1901) 226 55.1 3e-06
XP_011516552 (OMIM: 602014,607009) PREDICTED: tran (1930) 226 55.1 3.1e-06
XP_011516551 (OMIM: 602014,607009) PREDICTED: tran (1944) 226 55.1 3.1e-06
XP_011516550 (OMIM: 602014,607009) PREDICTED: tran (1975) 226 55.1 3.1e-06
XP_011516549 (OMIM: 602014,607009) PREDICTED: tran (1979) 226 55.1 3.1e-06
XP_011516548 (OMIM: 602014,607009) PREDICTED: tran (1981) 226 55.1 3.1e-06
XP_011516547 (OMIM: 602014,607009) PREDICTED: tran (1991) 226 55.1 3.1e-06
NP_001170782 (OMIM: 602014,607009) transient recep (2017) 226 55.1 3.2e-06
NP_001170781 (OMIM: 602014,607009) transient recep (2017) 226 55.1 3.2e-06
XP_011516546 (OMIM: 602014,607009) PREDICTED: tran (2021) 226 55.1 3.2e-06
NP_060132 (OMIM: 602014,607009) transient receptor (2022) 226 55.1 3.2e-06
XP_016877844 (OMIM: 105500,605692) PREDICTED: tran (1826) 215 52.9 1.3e-05
XP_016877843 (OMIM: 105500,605692) PREDICTED: tran (1826) 215 52.9 1.3e-05
NP_001288141 (OMIM: 105500,605692) transient recep (1864) 215 53.0 1.3e-05
NP_060142 (OMIM: 105500,605692) transient receptor (1865) 215 53.0 1.3e-05
XP_016877842 (OMIM: 105500,605692) PREDICTED: tran (1873) 215 53.0 1.3e-05
XP_016877841 (OMIM: 105500,605692) PREDICTED: tran (1874) 215 53.0 1.3e-05
XP_005254543 (OMIM: 105500,605692) PREDICTED: tran (1885) 215 53.0 1.3e-05
XP_016877840 (OMIM: 105500,605692) PREDICTED: tran (1893) 215 53.0 1.3e-05
XP_016877839 (OMIM: 105500,605692) PREDICTED: tran (1894) 215 53.0 1.3e-05
>>NP_037434 (OMIM: 606968) eukaryotic elongation factor (725 aa)
initn: 4967 init1: 4967 opt: 4967 Z-score: 5249.7 bits: 981.9 E(85289): 0
Smith-Waterman score: 4967; 100.0% identity (100.0% similar) in 725 aa overlap (1-725:1-725)
10 20 30 40 50 60
pF1KB5 MADEDLIFRLEGVDGGQSPRAGHDGDSDGDSDDEEGYFICPITDDPSSNQNVNSKVNKYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 MADEDLIFRLEGVDGGQSPRAGHDGDSDGDSDDEEGYFICPITDDPSSNQNVNSKVNKYY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 SNLTKSERYSSSGSPANSFHFKEAWKHAIQKAKHMPDPWAEFHLEDIATERATRHRYNAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 SNLTKSERYSSSGSPANSFHFKEAWKHAIQKAKHMPDPWAEFHLEDIATERATRHRYNAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 TGEWLDDEVLIKMASQPFGRGAMRECFRTKKLSNFLHAQQWKGASNYVAKRYIEPVDRDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 TGEWLDDEVLIKMASQPFGRGAMRECFRTKKLSNFLHAQQWKGASNYVAKRYIEPVDRDV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 YFEDVRLQMEAKLWGEEYNRHKPPKQVDIMQMCIIELKDRPGKPLFHLEHYIEGKYIKYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 YFEDVRLQMEAKLWGEEYNRHKPPKQVDIMQMCIIELKDRPGKPLFHLEHYIEGKYIKYN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 SNSGFVRDDNIRLTPQAFSHFTFERSGHQLIVVDIQGVGDLYTDPQIHTETGTDFGDGNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 SNSGFVRDDNIRLTPQAFSHFTFERSGHQLIVVDIQGVGDLYTDPQIHTETGTDFGDGNL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 GVRGMALFFYSHACNRICESMGLAPFDLSPRERDAVNQNTKLLQSAKTILRGTEEKCGSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 GVRGMALFFYSHACNRICESMGLAPFDLSPRERDAVNQNTKLLQSAKTILRGTEEKCGSP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 RVRTLSGSRPPLLRPLSENSGDENMSDVTFDSLPSSPSSATPHSQKLDHLHWPVFSDLDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 RVRTLSGSRPPLLRPLSENSGDENMSDVTFDSLPSSPSSATPHSQKLDHLHWPVFSDLDN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 MASRDHDHLDNHRESENSGDSGYPSEKRGELDDPEPREHGHSYSNRKYESDEDSLGSSGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 MASRDHDHLDNHRESENSGDSGYPSEKRGELDDPEPREHGHSYSNRKYESDEDSLGSSGR
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 VCVEKWNLLNSSRLHLPRASAVALEVQRLNALDLEKKIGKSILGKVHLAMVRYHEGGRFC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 VCVEKWNLLNSSRLHLPRASAVALEVQRLNALDLEKKIGKSILGKVHLAMVRYHEGGRFC
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB5 EKGEEWDQESAVFHLEHAANLGELEAIVGLGLMYSQLPHHILADVSLKETEENKTKGFDY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 EKGEEWDQESAVFHLEHAANLGELEAIVGLGLMYSQLPHHILADVSLKETEENKTKGFDY
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB5 LLKAAEAGDRQSMILVARAFDSGQNLSPDRCQDWLEALHWYNTALEMTDCDEGGEYDGMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 LLKAAEAGDRQSMILVARAFDSGQNLSPDRCQDWLEALHWYNTALEMTDCDEGGEYDGMQ
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB5 DEPRYMMLAREAEMLFTGGYGLEKDPQRSGDLYTQAAEAAMEAMKGRLANQYYQKAEEAW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 DEPRYMMLAREAEMLFTGGYGLEKDPQRSGDLYTQAAEAAMEAMKGRLANQYYQKAEEAW
670 680 690 700 710 720
pF1KB5 AQMEE
:::::
NP_037 AQMEE
>>XP_016878682 (OMIM: 606968) PREDICTED: eukaryotic elon (725 aa)
initn: 4961 init1: 4961 opt: 4961 Z-score: 5243.3 bits: 980.8 E(85289): 0
Smith-Waterman score: 4961; 99.9% identity (100.0% similar) in 725 aa overlap (1-725:1-725)
10 20 30 40 50 60
pF1KB5 MADEDLIFRLEGVDGGQSPRAGHDGDSDGDSDDEEGYFICPITDDPSSNQNVNSKVNKYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MADEDLIFRLEGVDGGQSPRAGHDGDSDGDSDDEEGYFICPITDDPSSNQNVNSKVNKYY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 SNLTKSERYSSSGSPANSFHFKEAWKHAIQKAKHMPDPWAEFHLEDIATERATRHRYNAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SNLTKSERYSSSGSPANSFHFKEAWKHAIQKAKHMPDPWAEFHLEDIATERATRHRYNAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 TGEWLDDEVLIKMASQPFGRGAMRECFRTKKLSNFLHAQQWKGASNYVAKRYIEPVDRDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TGEWLDDEVLIKMASQPFGRGAMRECFRTKKLSNFLHAQQWKGASNYVAKRYIEPVDRDV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 YFEDVRLQMEAKLWGEEYNRHKPPKQVDIMQMCIIELKDRPGKPLFHLEHYIEGKYIKYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YFEDVRLQMEAKLWGEEYNRHKPPKQVDIMQMCIIELKDRPGKPLFHLEHYIEGKYIKYN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 SNSGFVRDDNIRLTPQAFSHFTFERSGHQLIVVDIQGVGDLYTDPQIHTETGTDFGDGNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SNSGFVRDDNIRLTPQAFSHFTFERSGHQLIVVDIQGVGDLYTDPQIHTETGTDFGDGNL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 GVRGMALFFYSHACNRICESMGLAPFDLSPRERDAVNQNTKLLQSAKTILRGTEEKCGSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GVRGMALFFYSHACNRICESMGLAPFDLSPRERDAVNQNTKLLQSAKTILRGTEEKCGSP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 RVRTLSGSRPPLLRPLSENSGDENMSDVTFDSLPSSPSSATPHSQKLDHLHWPVFSDLDN
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QVRTLSGSRPPLLRPLSENSGDENMSDVTFDSLPSSPSSATPHSQKLDHLHWPVFSDLDN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 MASRDHDHLDNHRESENSGDSGYPSEKRGELDDPEPREHGHSYSNRKYESDEDSLGSSGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MASRDHDHLDNHRESENSGDSGYPSEKRGELDDPEPREHGHSYSNRKYESDEDSLGSSGR
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 VCVEKWNLLNSSRLHLPRASAVALEVQRLNALDLEKKIGKSILGKVHLAMVRYHEGGRFC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VCVEKWNLLNSSRLHLPRASAVALEVQRLNALDLEKKIGKSILGKVHLAMVRYHEGGRFC
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB5 EKGEEWDQESAVFHLEHAANLGELEAIVGLGLMYSQLPHHILADVSLKETEENKTKGFDY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EKGEEWDQESAVFHLEHAANLGELEAIVGLGLMYSQLPHHILADVSLKETEENKTKGFDY
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB5 LLKAAEAGDRQSMILVARAFDSGQNLSPDRCQDWLEALHWYNTALEMTDCDEGGEYDGMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLKAAEAGDRQSMILVARAFDSGQNLSPDRCQDWLEALHWYNTALEMTDCDEGGEYDGMQ
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB5 DEPRYMMLAREAEMLFTGGYGLEKDPQRSGDLYTQAAEAAMEAMKGRLANQYYQKAEEAW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DEPRYMMLAREAEMLFTGGYGLEKDPQRSGDLYTQAAEAAMEAMKGRLANQYYQKAEEAW
670 680 690 700 710 720
pF1KB5 AQMEE
:::::
XP_016 AQMEE
>>XP_016878683 (OMIM: 606968) PREDICTED: eukaryotic elon (704 aa)
initn: 4807 init1: 3177 opt: 3177 Z-score: 3358.0 bits: 631.9 E(85289): 2.6e-180
Smith-Waterman score: 4769; 97.0% identity (97.1% similar) in 725 aa overlap (1-725:1-704)
10 20 30 40 50 60
pF1KB5 MADEDLIFRLEGVDGGQSPRAGHDGDSDGDSDDEEGYFICPITDDPSSNQNVNSKVNKYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MADEDLIFRLEGVDGGQSPRAGHDGDSDGDSDDEEGYFICPITDDPSSNQNVNSKVNKYY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 SNLTKSERYSSSGSPANSFHFKEAWKHAIQKAKHMPDPWAEFHLEDIATERATRHRYNAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SNLTKSERYSSSGSPANSFHFKEAWKHAIQKAKHMPDPWAEFHLEDIATERATRHRYNAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 TGEWLDDEVLIKMASQPFGRGAMRECFRTKKLSNFLHAQQWKGASNYVAKRYIEPVDRDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TGEWLDDEVLIKMASQPFGRGAMRECFRTKKLSNFLHAQQWKGASNYVAKRYIEPVDRDV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 YFEDVRLQMEAKLWGEEYNRHKPPKQVDIMQMCIIELKDRPGKPLFHLEHYIEGKYIKYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YFEDVRLQMEAKLWGEEYNRHKPPKQVDIMQMCIIELKDRPGKPLFHLEHYIEGKYIKYN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 SNSGFVRDDNIRLTPQAFSHFTFERSGHQLIVVDIQGVGDLYTDPQIHTETGTDFGDGNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SNSGFVRDDNIRLTPQAFSHFTFERSGHQLIVVDIQGVGDLYTDPQIHTETGTDFGDGNL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 GVRGMALFFYSHACNRICESMGLAPFDLSPRERDAVNQNTKLLQSAKTILRGTEEKCGSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GVRGMALFFYSHACNRICESMGLAPFDLSPRERDAVNQNTKLLQSAKTILRGTEEKCGSP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 RVRTLSGSRPPLLRPLSENSGDENMSDVTFDSLPSSPSSATPHSQKLDHLHWPVFSDLDN
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QVRTLSGSRPPLLRPLSENSGDENMSDVTFDSLPSSPSSATPHSQKLDHLHWPVFSDLDN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 MASRDHDHLDNHRESENSGDSGYPSEKRGELDDPEPREHGHSYSNRKYESDEDSLGSSGR
:::::::::::::::::::::::::::::::::::::::
XP_016 MASRDHDHLDNHRESENSGDSGYPSEKRGELDDPEPREH---------------------
430 440 450
490 500 510 520 530 540
pF1KB5 VCVEKWNLLNSSRLHLPRASAVALEVQRLNALDLEKKIGKSILGKVHLAMVRYHEGGRFC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VCVEKWNLLNSSRLHLPRASAVALEVQRLNALDLEKKIGKSILGKVHLAMVRYHEGGRFC
460 470 480 490 500 510
550 560 570 580 590 600
pF1KB5 EKGEEWDQESAVFHLEHAANLGELEAIVGLGLMYSQLPHHILADVSLKETEENKTKGFDY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EKGEEWDQESAVFHLEHAANLGELEAIVGLGLMYSQLPHHILADVSLKETEENKTKGFDY
520 530 540 550 560 570
610 620 630 640 650 660
pF1KB5 LLKAAEAGDRQSMILVARAFDSGQNLSPDRCQDWLEALHWYNTALEMTDCDEGGEYDGMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLKAAEAGDRQSMILVARAFDSGQNLSPDRCQDWLEALHWYNTALEMTDCDEGGEYDGMQ
580 590 600 610 620 630
670 680 690 700 710 720
pF1KB5 DEPRYMMLAREAEMLFTGGYGLEKDPQRSGDLYTQAAEAAMEAMKGRLANQYYQKAEEAW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DEPRYMMLAREAEMLFTGGYGLEKDPQRSGDLYTQAAEAAMEAMKGRLANQYYQKAEEAW
640 650 660 670 680 690
pF1KB5 AQMEE
:::::
XP_016 AQMEE
700
>>XP_016864139 (OMIM: 607347) PREDICTED: alpha-protein k (1037 aa)
initn: 187 init1: 87 opt: 270 Z-score: 283.3 bits: 63.5 E(85289): 4.9e-09
Smith-Waterman score: 270; 29.9% identity (56.2% similar) in 224 aa overlap (116-323:809-1026)
90 100 110 120 130 140
pF1KB5 KHAIQKAKHMPDPWAEFHLEDIATERATRHRYNAVTGEWLDDEVLIKMASQPFGRGAMRE
.:. . : .:... ... . :.
XP_016 VRHDWLFQRLENTGVFKPSQLHRAHSALLLKYSKKSELWTAQETIVYLGDYLTVKKKGRQ
780 790 800 810 820 830
150 160 170 180 190 200
pF1KB5 CFRTKKLSNFLHAQQWKGASNYVAKRYIEPVDRDVYFEDVRLQMEAKLWGEEYNR----H
:. . :: .. : ::.: : : .: ::. :: :. . :.:. .
XP_016 --RNAFWVHHLHQEEILG--RYVGKDYKEQKGLWHHFTDVERQMTAQHYVTEFNKRLYEQ
840 850 860 870 880 890
210 220 230 240 250
pF1KB5 KPPKQVDIMQMCIIE-LKDRPGKPLFHLEHYIEGKYIKYNSNSGFVRDDNIRLTPQ--AF
. : :. . :. :.:. : . .: :: :...: ..:. :. . . : :.
XP_016 NIPTQIFYIPSTILLILEDKTIKGCISVEPYILGEFVKLSNNTKVVKTE-YKATEYGLAY
900 910 920 930 940 950
260 270 280 290 300 310
pF1KB5 SHFTFERSGHQLIVVDIQGV------GDLY-TDPQIHTETGTDFGDGNLGVRGMALFFYS
.::..: :.:. .:::.:: : .: ::::::. : :.: ::. :: .
XP_016 GHFSYEFSNHRDVVVDLQGWVTGNGKGLIYLTDPQIHSVDQKVFTT-NFGKRGIFYFFNN
960 970 980 990 1000 1010
320 330 340 350 360
pF1KB5 -HA-CNRICESMGLAPFDLSPRERDAVNQNTKLLQSAKTILRGTEEKCGSPRVRTLSGSR
:. ::.::. ..:
XP_016 QHVECNEICHRLSLTRPSMEKPCKS
1020 1030
>>XP_016864140 (OMIM: 607347) PREDICTED: alpha-protein k (1037 aa)
initn: 187 init1: 87 opt: 270 Z-score: 283.3 bits: 63.5 E(85289): 4.9e-09
Smith-Waterman score: 270; 29.9% identity (56.2% similar) in 224 aa overlap (116-323:809-1026)
90 100 110 120 130 140
pF1KB5 KHAIQKAKHMPDPWAEFHLEDIATERATRHRYNAVTGEWLDDEVLIKMASQPFGRGAMRE
.:. . : .:... ... . :.
XP_016 VRHDWLFQRLENTGVFKPSQLHRAHSALLLKYSKKSELWTAQETIVYLGDYLTVKKKGRQ
780 790 800 810 820 830
150 160 170 180 190 200
pF1KB5 CFRTKKLSNFLHAQQWKGASNYVAKRYIEPVDRDVYFEDVRLQMEAKLWGEEYNR----H
:. . :: .. : ::.: : : .: ::. :: :. . :.:. .
XP_016 --RNAFWVHHLHQEEILG--RYVGKDYKEQKGLWHHFTDVERQMTAQHYVTEFNKRLYEQ
840 850 860 870 880 890
210 220 230 240 250
pF1KB5 KPPKQVDIMQMCIIE-LKDRPGKPLFHLEHYIEGKYIKYNSNSGFVRDDNIRLTPQ--AF
. : :. . :. :.:. : . .: :: :...: ..:. :. . . : :.
XP_016 NIPTQIFYIPSTILLILEDKTIKGCISVEPYILGEFVKLSNNTKVVKTE-YKATEYGLAY
900 910 920 930 940 950
260 270 280 290 300 310
pF1KB5 SHFTFERSGHQLIVVDIQGV------GDLY-TDPQIHTETGTDFGDGNLGVRGMALFFYS
.::..: :.:. .:::.:: : .: ::::::. : :.: ::. :: .
XP_016 GHFSYEFSNHRDVVVDLQGWVTGNGKGLIYLTDPQIHSVDQKVFTT-NFGKRGIFYFFNN
960 970 980 990 1000 1010
320 330 340 350 360
pF1KB5 -HA-CNRICESMGLAPFDLSPRERDAVNQNTKLLQSAKTILRGTEEKCGSPRVRTLSGSR
:. ::.::. ..:
XP_016 QHVECNEICHRLSLTRPSMEKPCKS
1020 1030
>>XP_016864138 (OMIM: 607347) PREDICTED: alpha-protein k (1043 aa)
initn: 187 init1: 87 opt: 270 Z-score: 283.3 bits: 63.5 E(85289): 4.9e-09
Smith-Waterman score: 270; 29.9% identity (56.2% similar) in 224 aa overlap (116-323:815-1032)
90 100 110 120 130 140
pF1KB5 KHAIQKAKHMPDPWAEFHLEDIATERATRHRYNAVTGEWLDDEVLIKMASQPFGRGAMRE
.:. . : .:... ... . :.
XP_016 VRHDWLFQRLENTGVFKPSQLHRAHSALLLKYSKKSELWTAQETIVYLGDYLTVKKKGRQ
790 800 810 820 830 840
150 160 170 180 190 200
pF1KB5 CFRTKKLSNFLHAQQWKGASNYVAKRYIEPVDRDVYFEDVRLQMEAKLWGEEYNR----H
:. . :: .. : ::.: : : .: ::. :: :. . :.:. .
XP_016 --RNAFWVHHLHQEEILG--RYVGKDYKEQKGLWHHFTDVERQMTAQHYVTEFNKRLYEQ
850 860 870 880 890 900
210 220 230 240 250
pF1KB5 KPPKQVDIMQMCIIE-LKDRPGKPLFHLEHYIEGKYIKYNSNSGFVRDDNIRLTPQ--AF
. : :. . :. :.:. : . .: :: :...: ..:. :. . . : :.
XP_016 NIPTQIFYIPSTILLILEDKTIKGCISVEPYILGEFVKLSNNTKVVKTE-YKATEYGLAY
910 920 930 940 950
260 270 280 290 300 310
pF1KB5 SHFTFERSGHQLIVVDIQGV------GDLY-TDPQIHTETGTDFGDGNLGVRGMALFFYS
.::..: :.:. .:::.:: : .: ::::::. : :.: ::. :: .
XP_016 GHFSYEFSNHRDVVVDLQGWVTGNGKGLIYLTDPQIHSVDQKVFTT-NFGKRGIFYFFNN
960 970 980 990 1000 1010
320 330 340 350 360
pF1KB5 -HA-CNRICESMGLAPFDLSPRERDAVNQNTKLLQSAKTILRGTEEKCGSPRVRTLSGSR
:. ::.::. ..:
XP_016 QHVECNEICHRLSLTRPSMEKPCKS
1020 1030 1040
>>NP_001240813 (OMIM: 607347) alpha-protein kinase 1 iso (1166 aa)
initn: 151 init1: 87 opt: 270 Z-score: 282.6 bits: 63.6 E(85289): 5.3e-09
Smith-Waterman score: 270; 29.9% identity (56.2% similar) in 224 aa overlap (116-323:939-1156)
90 100 110 120 130 140
pF1KB5 KHAIQKAKHMPDPWAEFHLEDIATERATRHRYNAVTGEWLDDEVLIKMASQPFGRGAMRE
.:. . : .:... ... . :.
NP_001 VRHDWLFQRLENTGVFKPSQLHRAHSALLLKYSKKSELWTAQETIVYLGDYLTVKKKGRQ
910 920 930 940 950 960
150 160 170 180 190 200
pF1KB5 CFRTKKLSNFLHAQQWKGASNYVAKRYIEPVDRDVYFEDVRLQMEAKLWGEEYNR----H
:. . :: .. : ::.: : : .: ::. :: :. . :.:. .
NP_001 --RNAFWVHHLHQEEILG--RYVGKDYKEQKGLWHHFTDVERQMTAQHYVTEFNKRLYEQ
970 980 990 1000 1010 1020
210 220 230 240 250
pF1KB5 KPPKQVDIMQMCIIE-LKDRPGKPLFHLEHYIEGKYIKYNSNSGFVRDDNIRLTPQ--AF
. : :. . :. :.:. : . .: :: :...: ..:. :. . . : :.
NP_001 NIPTQIFYIPSTILLILEDKTIKGCISVEPYILGEFVKLSNNTKVVKTE-YKATEYGLAY
1030 1040 1050 1060 1070 1080
260 270 280 290 300 310
pF1KB5 SHFTFERSGHQLIVVDIQGV------GDLY-TDPQIHTETGTDFGDGNLGVRGMALFFYS
.::..: :.:. .:::.:: : .: ::::::. : :.: ::. :: .
NP_001 GHFSYEFSNHRDVVVDLQGWVTGNGKGLIYLTDPQIHSVDQKVFTT-NFGKRGIFYFFNN
1090 1100 1110 1120 1130 1140
320 330 340 350 360
pF1KB5 -HA-CNRICESMGLAPFDLSPRERDAVNQNTKLLQSAKTILRGTEEKCGSPRVRTLSGSR
:. ::.::. ..:
NP_001 QHVECNEICHRLSLTRPSMEKPCT
1150 1160
>>XP_016864136 (OMIM: 607347) PREDICTED: alpha-protein k (1173 aa)
initn: 151 init1: 87 opt: 270 Z-score: 282.5 bits: 63.6 E(85289): 5.3e-09
Smith-Waterman score: 270; 29.9% identity (56.2% similar) in 224 aa overlap (116-323:945-1162)
90 100 110 120 130 140
pF1KB5 KHAIQKAKHMPDPWAEFHLEDIATERATRHRYNAVTGEWLDDEVLIKMASQPFGRGAMRE
.:. . : .:... ... . :.
XP_016 VRHDWLFQRLENTGVFKPSQLHRAHSALLLKYSKKSELWTAQETIVYLGDYLTVKKKGRQ
920 930 940 950 960 970
150 160 170 180 190 200
pF1KB5 CFRTKKLSNFLHAQQWKGASNYVAKRYIEPVDRDVYFEDVRLQMEAKLWGEEYNR----H
:. . :: .. : ::.: : : .: ::. :: :. . :.:. .
XP_016 --RNAFWVHHLHQEEILG--RYVGKDYKEQKGLWHHFTDVERQMTAQHYVTEFNKRLYEQ
980 990 1000 1010 1020 1030
210 220 230 240 250
pF1KB5 KPPKQVDIMQMCIIE-LKDRPGKPLFHLEHYIEGKYIKYNSNSGFVRDDNIRLTPQ--AF
. : :. . :. :.:. : . .: :: :...: ..:. :. . . : :.
XP_016 NIPTQIFYIPSTILLILEDKTIKGCISVEPYILGEFVKLSNNTKVVKTE-YKATEYGLAY
1040 1050 1060 1070 1080
260 270 280 290 300 310
pF1KB5 SHFTFERSGHQLIVVDIQGV------GDLY-TDPQIHTETGTDFGDGNLGVRGMALFFYS
.::..: :.:. .:::.:: : .: ::::::. : :.: ::. :: .
XP_016 GHFSYEFSNHRDVVVDLQGWVTGNGKGLIYLTDPQIHSVDQKVFTT-NFGKRGIFYFFNN
1090 1100 1110 1120 1130 1140
320 330 340 350 360
pF1KB5 -HA-CNRICESMGLAPFDLSPRERDAVNQNTKLLQSAKTILRGTEEKCGSPRVRTLSGSR
:. ::.::. ..:
XP_016 QHVECNEICHRLSLTRPSMEKPCKS
1150 1160 1170
>>XP_016864137 (OMIM: 607347) PREDICTED: alpha-protein k (1173 aa)
initn: 151 init1: 87 opt: 270 Z-score: 282.5 bits: 63.6 E(85289): 5.3e-09
Smith-Waterman score: 270; 29.9% identity (56.2% similar) in 224 aa overlap (116-323:945-1162)
90 100 110 120 130 140
pF1KB5 KHAIQKAKHMPDPWAEFHLEDIATERATRHRYNAVTGEWLDDEVLIKMASQPFGRGAMRE
.:. . : .:... ... . :.
XP_016 VRHDWLFQRLENTGVFKPSQLHRAHSALLLKYSKKSELWTAQETIVYLGDYLTVKKKGRQ
920 930 940 950 960 970
150 160 170 180 190 200
pF1KB5 CFRTKKLSNFLHAQQWKGASNYVAKRYIEPVDRDVYFEDVRLQMEAKLWGEEYNR----H
:. . :: .. : ::.: : : .: ::. :: :. . :.:. .
XP_016 --RNAFWVHHLHQEEILG--RYVGKDYKEQKGLWHHFTDVERQMTAQHYVTEFNKRLYEQ
980 990 1000 1010 1020 1030
210 220 230 240 250
pF1KB5 KPPKQVDIMQMCIIE-LKDRPGKPLFHLEHYIEGKYIKYNSNSGFVRDDNIRLTPQ--AF
. : :. . :. :.:. : . .: :: :...: ..:. :. . . : :.
XP_016 NIPTQIFYIPSTILLILEDKTIKGCISVEPYILGEFVKLSNNTKVVKTE-YKATEYGLAY
1040 1050 1060 1070 1080
260 270 280 290 300 310
pF1KB5 SHFTFERSGHQLIVVDIQGV------GDLY-TDPQIHTETGTDFGDGNLGVRGMALFFYS
.::..: :.:. .:::.:: : .: ::::::. : :.: ::. :: .
XP_016 GHFSYEFSNHRDVVVDLQGWVTGNGKGLIYLTDPQIHSVDQKVFTT-NFGKRGIFYFFNN
1090 1100 1110 1120 1130 1140
320 330 340 350 360
pF1KB5 -HA-CNRICESMGLAPFDLSPRERDAVNQNTKLLQSAKTILRGTEEKCGSPRVRTLSGSR
:. ::.::. ..:
XP_016 QHVECNEICHRLSLTRPSMEKPCKS
1150 1160 1170
>>XP_016864135 (OMIM: 607347) PREDICTED: alpha-protein k (1210 aa)
initn: 151 init1: 87 opt: 270 Z-score: 282.4 bits: 63.6 E(85289): 5.5e-09
Smith-Waterman score: 270; 29.9% identity (56.2% similar) in 224 aa overlap (116-323:982-1199)
90 100 110 120 130 140
pF1KB5 KHAIQKAKHMPDPWAEFHLEDIATERATRHRYNAVTGEWLDDEVLIKMASQPFGRGAMRE
.:. . : .:... ... . :.
XP_016 VRHDWLFQRLENTGVFKPSQLHRAHSALLLKYSKKSELWTAQETIVYLGDYLTVKKKGRQ
960 970 980 990 1000 1010
150 160 170 180 190 200
pF1KB5 CFRTKKLSNFLHAQQWKGASNYVAKRYIEPVDRDVYFEDVRLQMEAKLWGEEYNR----H
:. . :: .. : ::.: : : .: ::. :: :. . :.:. .
XP_016 --RNAFWVHHLHQEEILG--RYVGKDYKEQKGLWHHFTDVERQMTAQHYVTEFNKRLYEQ
1020 1030 1040 1050 1060
210 220 230 240 250
pF1KB5 KPPKQVDIMQMCIIE-LKDRPGKPLFHLEHYIEGKYIKYNSNSGFVRDDNIRLTPQ--AF
. : :. . :. :.:. : . .: :: :...: ..:. :. . . : :.
XP_016 NIPTQIFYIPSTILLILEDKTIKGCISVEPYILGEFVKLSNNTKVVKTE-YKATEYGLAY
1070 1080 1090 1100 1110 1120
260 270 280 290 300 310
pF1KB5 SHFTFERSGHQLIVVDIQGV------GDLY-TDPQIHTETGTDFGDGNLGVRGMALFFYS
.::..: :.:. .:::.:: : .: ::::::. : :.: ::. :: .
XP_016 GHFSYEFSNHRDVVVDLQGWVTGNGKGLIYLTDPQIHSVDQKVFTT-NFGKRGIFYFFNN
1130 1140 1150 1160 1170 1180
320 330 340 350 360
pF1KB5 -HA-CNRICESMGLAPFDLSPRERDAVNQNTKLLQSAKTILRGTEEKCGSPRVRTLSGSR
:. ::.::. ..:
XP_016 QHVECNEICHRLSLTRPSMEKPCKS
1190 1200 1210
725 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 00:05:14 2016 done: Sat Nov 5 00:05:15 2016
Total Scan time: 6.990 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]