Result of FASTA (ccds) for
pF1KB5611
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5611, 382 aa
1>>>pF1KB5611 382 - 382 aa - 382 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3567+/-0.000813; mu= 16.2891+/- 0.049
mean_var=66.5338+/-13.041, 0's: 0 Z-trim(107.1): 25 B-trim: 0 in 0/51
Lambda= 0.157236
statistics sampled from 9336 (9360) to 9336 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.674), E-opt: 0.2 (0.288), width: 16
Scan time: 2.840
The best scores are: opt bits E(32554)
CCDS9744.1 PPM1A gene_id:5494|Hs108|chr14 ( 382) 2610 600.9 6e-172
CCDS45120.1 PPM1A gene_id:5494|Hs108|chr14 ( 455) 2610 601.0 7e-172
CCDS9745.1 PPM1A gene_id:5494|Hs108|chr14 ( 324) 2178 502.9 1.7e-142
CCDS1816.1 PPM1B gene_id:5495|Hs108|chr2 ( 387) 1997 461.9 4.4e-130
CCDS1817.1 PPM1B gene_id:5495|Hs108|chr2 ( 479) 1983 458.7 4.8e-129
CCDS46271.1 PPM1B gene_id:5495|Hs108|chr2 ( 380) 1980 458.0 6.3e-129
CCDS46115.1 PPM1N gene_id:147699|Hs108|chr19 ( 430) 1018 239.8 3.4e-63
CCDS1818.1 PPM1B gene_id:5495|Hs108|chr2 ( 192) 438 108.1 7e-24
CCDS33886.1 PPM1L gene_id:151742|Hs108|chr3 ( 360) 436 107.8 1.6e-23
CCDS1752.1 PPM1G gene_id:5496|Hs108|chr2 ( 546) 395 98.6 1.5e-20
CCDS3629.1 PPM1K gene_id:152926|Hs108|chr4 ( 372) 381 95.3 9.6e-20
CCDS82868.1 PPM1L gene_id:151742|Hs108|chr3 ( 233) 357 89.7 2.8e-18
CCDS82869.1 PPM1L gene_id:151742|Hs108|chr3 ( 181) 347 87.4 1.1e-17
CCDS2526.1 ILKAP gene_id:80895|Hs108|chr2 ( 392) 306 78.3 1.3e-14
CCDS13796.1 PPM1F gene_id:9647|Hs108|chr22 ( 454) 265 69.0 9.4e-12
CCDS11613.1 PPM1E gene_id:22843|Hs108|chr17 ( 755) 262 68.5 2.3e-11
>>CCDS9744.1 PPM1A gene_id:5494|Hs108|chr14 (382 aa)
initn: 2610 init1: 2610 opt: 2610 Z-score: 3200.5 bits: 600.9 E(32554): 6e-172
Smith-Waterman score: 2610; 100.0% identity (100.0% similar) in 382 aa overlap (1-382:1-382)
10 20 30 40 50 60
pF1KB5 MGAFLDKPKMEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 MGAFLDKPKMEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 GHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 GHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 GADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 GADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 SVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 SVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 IWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNAPKVSPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 IWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNAPKVSPE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 AVKKEAELDKYLECRVEEIIKKQGEGVPDLVHVMRTLASENIPSLPPGGELASKRNVIEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 AVKKEAELDKYLECRVEEIIKKQGEGVPDLVHVMRTLASENIPSLPPGGELASKRNVIEA
310 320 330 340 350 360
370 380
pF1KB5 VYNRLNPYKNDDTDSTSTDDMW
::::::::::::::::::::::
CCDS97 VYNRLNPYKNDDTDSTSTDDMW
370 380
>>CCDS45120.1 PPM1A gene_id:5494|Hs108|chr14 (455 aa)
initn: 2610 init1: 2610 opt: 2610 Z-score: 3199.3 bits: 601.0 E(32554): 7e-172
Smith-Waterman score: 2610; 100.0% identity (100.0% similar) in 382 aa overlap (1-382:74-455)
10 20 30
pF1KB5 MGAFLDKPKMEKHNAQGQGNGLRYGLSSMQ
::::::::::::::::::::::::::::::
CCDS45 ERRRNEKRGNQMKRMCERKKYETDLEDQDIMGAFLDKPKMEKHNAQGQGNGLRYGLSSMQ
50 60 70 80 90 100
40 50 60 70 80 90
pF1KB5 GWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAG
110 120 130 140 150 160
100 110 120 130 140 150
pF1KB5 APSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 APSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGL
170 180 190 200 210 220
160 170 180 190 200 210
pF1KB5 LCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGP
230 240 250 260 270 280
220 230 240 250 260 270
pF1KB5 TEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 TEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNE
290 300 310 320 330 340
280 290 300 310 320 330
pF1KB5 VVDTCLYKGSRDNMSVILICFPNAPKVSPEAVKKEAELDKYLECRVEEIIKKQGEGVPDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 VVDTCLYKGSRDNMSVILICFPNAPKVSPEAVKKEAELDKYLECRVEEIIKKQGEGVPDL
350 360 370 380 390 400
340 350 360 370 380
pF1KB5 VHVMRTLASENIPSLPPGGELASKRNVIEAVYNRLNPYKNDDTDSTSTDDMW
::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 VHVMRTLASENIPSLPPGGELASKRNVIEAVYNRLNPYKNDDTDSTSTDDMW
410 420 430 440 450
>>CCDS9745.1 PPM1A gene_id:5494|Hs108|chr14 (324 aa)
initn: 2178 init1: 2178 opt: 2178 Z-score: 2671.9 bits: 502.9 E(32554): 1.7e-142
Smith-Waterman score: 2178; 100.0% identity (100.0% similar) in 317 aa overlap (1-317:1-317)
10 20 30 40 50 60
pF1KB5 MGAFLDKPKMEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 MGAFLDKPKMEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 GHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 GHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 GADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 GADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 SVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 SVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 IWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNAPKVSPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 IWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNAPKVSPE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 AVKKEAELDKYLECRVEEIIKKQGEGVPDLVHVMRTLASENIPSLPPGGELASKRNVIEA
:::::::::::::::::
CCDS97 AVKKEAELDKYLECRVEGGSFNKK
310 320
>>CCDS1816.1 PPM1B gene_id:5495|Hs108|chr2 (387 aa)
initn: 1937 init1: 889 opt: 1997 Z-score: 2448.9 bits: 461.9 E(32554): 4.4e-130
Smith-Waterman score: 1997; 75.8% identity (90.2% similar) in 388 aa overlap (1-382:1-387)
10 20 30 40 50 60
pF1KB5 MGAFLDKPKMEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYD
::::::::: :::::.: :::::::::::::::::::::::::.:.: :::.::::::::
CCDS18 MGAFLDKPKTEKHNAHGAGNGLRYGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYD
10 20 30 40 50 60
70 80 90 100 110
pF1KB5 GHAGSQVAKYCCEHLLDHITNNQDFK-----GSAGAPSVENVKNGIRTGFLEIDEHMRVM
:::::.::.:: :::.:::.:.::. ::: ::::::::::::::.:::.:: .
CCDS18 GHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALELSVENVKNGIRTGFLKIDEYMRNF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 SEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERI
:. ..: ::::::::::.:::.: :::::::::..: :: .: : :::::: :: :::::
CCDS18 SDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERI
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB5 QNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFII
::::::::::::::::::::::::.::::: :::::::::::::::..: :.:::. :::
CCDS18 QNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDE-FII
190 200 210 220 230
240 250 260 270 280 290
pF1KB5 LACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNAP
::::::::::.:::::..:.:::::.::::.::: ::::::.::::::::..:.:: :::
CCDS18 LACDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLVCFSNAP
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 KVSPEAVKKEAELDKYLECRVEEIIKKQGE-GVPDLVHVMRTLASENIPSLPPGGELASK
::: :::::..::::.:: :::::..:.:: :.:::.:::: :..::::.::::: ::.:
CCDS18 KVSDEAVKKDSELDKHLESRVEEIMEKSGEEGMPDLAHVMRILSAENIPNLPPGGGLAGK
300 310 320 330 340 350
360 370 380
pF1KB5 RNVIEAVYNRLNPYKNDDTDSTSTDDMW
::::::::.::::....: . . .: :
CCDS18 RNVIEAVYSRLNPHRESDGGAGDLEDPW
360 370 380
>>CCDS1817.1 PPM1B gene_id:5495|Hs108|chr2 (479 aa)
initn: 1940 init1: 892 opt: 1983 Z-score: 2430.3 bits: 458.7 E(32554): 4.8e-129
Smith-Waterman score: 1983; 75.9% identity (90.4% similar) in 386 aa overlap (1-380:1-385)
10 20 30 40 50 60
pF1KB5 MGAFLDKPKMEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYD
::::::::: :::::.: :::::::::::::::::::::::::.:.: :::.::::::::
CCDS18 MGAFLDKPKTEKHNAHGAGNGLRYGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYD
10 20 30 40 50 60
70 80 90 100 110
pF1KB5 GHAGSQVAKYCCEHLLDHITNNQDFK-----GSAGAPSVENVKNGIRTGFLEIDEHMRVM
:::::.::.:: :::.:::.:.::. ::: ::::::::::::::.:::.:: .
CCDS18 GHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALELSVENVKNGIRTGFLKIDEYMRNF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 SEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERI
:. ..: ::::::::::.:::.: :::::::::..: :: .: : :::::: :: :::::
CCDS18 SDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERI
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB5 QNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFII
::::::::::::::::::::::::.::::: :::::::::::::::..: :.:::. :::
CCDS18 QNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDE-FII
190 200 210 220 230
240 250 260 270 280 290
pF1KB5 LACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNAP
::::::::::.:::::..:.:::::.::::.::: ::::::.::::::::..:.:: :::
CCDS18 LACDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLVCFSNAP
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 KVSPEAVKKEAELDKYLECRVEEIIKKQGE-GVPDLVHVMRTLASENIPSLPPGGELASK
::: :::::..::::.:: :::::..:.:: :.:::.:::: :..::::.::::: ::.:
CCDS18 KVSDEAVKKDSELDKHLESRVEEIMEKSGEEGMPDLAHVMRILSAENIPNLPPGGGLAGK
300 310 320 330 340 350
360 370 380
pF1KB5 RNVIEAVYNRLNPYKNDDTDSTSTDDMW
::::::::.::::....: : ...
CCDS18 RNVIEAVYSRLNPHRESDGASDEAEESGSQGKLVEALRQMRINHRGNYRQLLEEMLTSYR
360 370 380 390 400 410
>>CCDS46271.1 PPM1B gene_id:5495|Hs108|chr2 (380 aa)
initn: 1937 init1: 889 opt: 1980 Z-score: 2428.2 bits: 458.0 E(32554): 6.3e-129
Smith-Waterman score: 1980; 77.2% identity (91.3% similar) in 378 aa overlap (1-372:1-377)
10 20 30 40 50 60
pF1KB5 MGAFLDKPKMEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYD
::::::::: :::::.: :::::::::::::::::::::::::.:.: :::.::::::::
CCDS46 MGAFLDKPKTEKHNAHGAGNGLRYGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYD
10 20 30 40 50 60
70 80 90 100 110
pF1KB5 GHAGSQVAKYCCEHLLDHITNNQDFK-----GSAGAPSVENVKNGIRTGFLEIDEHMRVM
:::::.::.:: :::.:::.:.::. ::: ::::::::::::::.:::.:: .
CCDS46 GHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALELSVENVKNGIRTGFLKIDEYMRNF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 SEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERI
:. ..: ::::::::::.:::.: :::::::::..: :: .: : :::::: :: :::::
CCDS46 SDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERI
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB5 QNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFII
::::::::::::::::::::::::.::::: :::::::::::::::..: :.:::. :::
CCDS46 QNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDE-FII
190 200 210 220 230
240 250 260 270 280 290
pF1KB5 LACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNAP
::::::::::.:::::..:.:::::.::::.::: ::::::.::::::::..:.:: :::
CCDS46 LACDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLVCFSNAP
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 KVSPEAVKKEAELDKYLECRVEEIIKKQGE-GVPDLVHVMRTLASENIPSLPPGGELASK
::: :::::..::::.:: :::::..:.:: :.:::.:::: :..::::.::::: ::.:
CCDS46 KVSDEAVKKDSELDKHLESRVEEIMEKSGEEGMPDLAHVMRILSAENIPNLPPGGGLAGK
300 310 320 330 340 350
360 370 380
pF1KB5 RNVIEAVYNRLNPYKNDDTDSTSTDDMW
::::::::.::::....:
CCDS46 RNVIEAVYSRLNPHRESDGQK
360 370 380
>>CCDS46115.1 PPM1N gene_id:147699|Hs108|chr19 (430 aa)
initn: 684 init1: 366 opt: 1018 Z-score: 1248.0 bits: 239.8 E(32554): 3.4e-63
Smith-Waterman score: 1018; 44.4% identity (71.0% similar) in 365 aa overlap (3-365:44-399)
10 20 30
pF1KB5 MGAFLDKPKMEK--HNAQGQGNGLRYGLSSMQ
..: :. . :.. ..:::.: :. :
CCDS46 TACKKKEREKEGREEEEEEEAGRRAPEGPRSLLTAPRRAQRPHGGAEASGGLRFGASAAQ
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB5 GWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAG
:::..::::: . ..::. .:..::: :::.:...:.. .:: :. :.. .
CCDS46 GWRARMEDAHCTWLSLPGLPPGWALFAVLDGHGGARAARFGARHLPGHVL--QELGPEPS
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB5 APSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGL
: :.:....: .:: ::..: . . .. .: ::: .:.::. :. .:::::..
CCDS46 EP--EGVREALRRAFLSADERLRSLWPR---VETGGCTAVVLLVSPRFLYLAHCGDSRAV
140 150 160 170 180
160 170 180 190 200 210
pF1KB5 LCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGP
: : : : :.::.: : :.:::. :::.. .::.:::::::::::: :: . :. :
CCDS46 LSRAGAVAFSTEDHRPLRPRERERIHAAGGTIRRRRVEGSLAVSRALGDFTYKEAPGRPP
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB5 TEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNE
:::: :::: . :. ::. :..:: ::.::.... : .: :::.. : .: .
CCDS46 ELQLVSAEPEVAALARQAEDE-FMLLASDGVWDTVSGAALAGLVASRLRLGLAPELLCAQ
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB5 VVDTCLYKGSRDNMSVILICFPNAPKVSPEAVKKEAELDKYLECRVEEIIKKQGEGVPDL
..:::: ::: :::. ::.:::.::. : ::...: :: : ::. :. . .. :.:
CCDS46 LLDTCLCKGSLDNMTCILVCFPGAPRPSEEAIRRELALDAALGCRIAELCAS-AQKPPSL
310 320 330 340 350 360
340 350 360 370 380
pF1KB5 VHVMRTLASENIPSLPPGGELASKRNVIEAVYNRLNPYKNDDTDSTSTDDMW
:.::::::.::.::::: : : .:: ::...
CCDS46 NTVFRTLASEDIPDLPPGGGLDCKATVIAEVYSQICQVSEECGEKGQDGAGKSNPTHLGS
370 380 390 400 410 420
CCDS46 ALDMEA
430
>>CCDS1818.1 PPM1B gene_id:5495|Hs108|chr2 (192 aa)
initn: 442 init1: 250 opt: 438 Z-score: 542.2 bits: 108.1 E(32554): 7e-24
Smith-Waterman score: 438; 66.3% identity (89.8% similar) in 98 aa overlap (284-380:1-98)
260 270 280 290 300 310
pF1KB5 VRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNAPKVSPEAVKKEAELDKYLE
::..:.:: :::::: :::::..::::.::
CCDS18 MSIVLVCFSNAPKVSDEAVKKDSELDKHLE
10 20 30
320 330 340 350 360 370
pF1KB5 CRVEEIIKKQGE-GVPDLVHVMRTLASENIPSLPPGGELASKRNVIEAVYNRLNPYKNDD
:::::..:.:: :.:::.:::: :..::::.::::: ::.:::::::::.::::....:
CCDS18 SRVEEIMEKSGEEGMPDLAHVMRILSAENIPNLPPGGGLAGKRNVIEAVYSRLNPHRESD
40 50 60 70 80 90
380
pF1KB5 TDSTSTDDMW
: ...
CCDS18 GASDEAEESGSQGKLVEALRQMRINHRGNYRQLLEEMLTSYRLAKVEGEESPAEPAATAT
100 110 120 130 140 150
>>CCDS33886.1 PPM1L gene_id:151742|Hs108|chr3 (360 aa)
initn: 360 init1: 97 opt: 436 Z-score: 535.6 bits: 107.8 E(32554): 1.6e-23
Smith-Waterman score: 436; 31.4% identity (63.9% similar) in 274 aa overlap (28-296:97-356)
10 20 30 40 50
pF1KB5 MGAFLDKPKMEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFA
:.:: : .::: .. : . . :.:.
CCDS33 MQNDRLGGLDVLEAEFSKTWEFKNHNVAVYSIQGRRDHMEDRFEVLTDLANKTHP-SIFG
70 80 90 100 110 120
60 70 80 90 100 110
pF1KB5 VYDGHAGSQVAKYCCEHLLDHITNN-QDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMS
..:::.: .:.: .: . . .. ::.. . :: . .. .. .: ::..: .
CCDS33 IFDGHGGETAAEYVKSRLPEALKQHLQDYEKDK-ENSVLSYQTILEQQILSIDREM--LE
130 140 150 160 170 180
120 130 140 150 160 170
pF1KB5 EKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLC-RNRKVHFFTQDHKPSNPLEKERI
. . :..:.: . .:.: . : :::::.:: .. .. ...:::: . :..::
CCDS33 KLTVSYDEAGTTCLIALLSDKDLTVANVGDSRGVLCDKDGNAIPLSHDHKPYQLKERKRI
190 200 210 220 230 240
180 190 200 210 220 230
pF1KB5 QNAGGSVMIQ---RVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQ
. ::: . .. ::.: ::.::.:::. : .. .: :.:.. .. .. . .
CCDS33 KRAGGFISFNGSWRVQGILAMSRSLGDYPLKNLN-------VVIPDPDILTFDLDKLQPE
250 260 270 280 290
240 250 260 270 280 290
pF1KB5 FIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFP
:.::: ::.::...::: :.. :: :. . . .: .:.: ::..:... :
CCDS33 FMILASDGLWDAFSNEEAVRFIKERL---DEPHFGAKSIVLQSFYRGCPDNITVMVVKFR
300 310 320 330 340 350
300 310 320 330 340 350
pF1KB5 NAPKVSPEAVKKEAELDKYLECRVEEIIKKQGEGVPDLVHVMRTLASENIPSLPPGGELA
:. :
CCDS33 NSSKTEEQ
360
>>CCDS1752.1 PPM1G gene_id:5496|Hs108|chr2 (546 aa)
initn: 544 init1: 226 opt: 395 Z-score: 482.6 bits: 98.6 E(32554): 1.5e-20
Smith-Waterman score: 447; 37.2% identity (66.1% similar) in 218 aa overlap (107-307:307-523)
80 90 100 110 120 130
pF1KB5 DHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRV--MSEKKHGADRSGSTAVGVLI
: .:.: : : :.. .. ::.::: .::
CCDS17 CSEEEDGYSSEEAENEEDEDDTEEAEEDDEEEEEEMMVPGMEGKEEPGSDSGTTAVVALI
280 290 300 310 320 330
140 150 160 170 180 190
pF1KB5 SPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQ-RVNGSLAV
.. : :::: .. . :. .. :::: . .: ::.::::.: .. ::::.: .
CCDS17 RGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDGRVNGGLNL
340 350 360 370 380 390
200 210 220 230 240 250
pF1KB5 SRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDF
:::.:: :: .. : ::..: :... . .: .:...::::::.::...:. ::
CCDS17 SRAIGDHFYKRNKNLPPEEQMISALPDIK-VLTLTDDHEFMVIACDGIWNVMSSQEVVDF
400 410 420 430 440 450
260 270 280 290
pF1KB5 VRSRLEVTDD------LEKVCNEVVDTCLYKGSR------DNMSVILICF-P-NAPKVSP
..:.. :. : .. .:..: :: . :::. :.::: : :. ...:
CCDS17 IQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICFKPRNTAELQP
460 470 480 490 500 510
300 310 320 330 340 350
pF1KB5 EAVKKEAELDKYLECRVEEIIKKQGEGVPDLVHVMRTLASENIPSLPPGGELASKRNVIE
:. :.. :
CCDS17 ESGKRKLEEVLSTEGAEENGNSDKKKKAKRD
520 530 540
382 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 22:43:42 2016 done: Thu Nov 3 22:43:43 2016
Total Scan time: 2.840 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]