Result of FASTA (ccds) for
pF1KB5637
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5637, 1077 aa
1>>>pF1KB5637 1077 - 1077 aa - 1077 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 14.3234+/-0.00128; mu= -14.9180+/- 0.078
mean_var=695.2919+/-141.738, 0's: 0 Z-trim(116.3): 77 B-trim: 125 in 1/54
Lambda= 0.048640
statistics sampled from 16817 (16877) to 16817 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.769), E-opt: 0.2 (0.518), width: 16
Scan time: 3.940
The best scores are: opt bits E(32554)
CCDS43379.1 TCERG1 gene_id:10915|Hs108|chr5 (1077) 7199 521.1 5e-147
CCDS4282.1 TCERG1 gene_id:10915|Hs108|chr5 (1098) 5317 389.1 2.9e-107
>>CCDS43379.1 TCERG1 gene_id:10915|Hs108|chr5 (1077 aa)
initn: 7199 init1: 7199 opt: 7199 Z-score: 2753.0 bits: 521.1 E(32554): 5e-147
Smith-Waterman score: 7199; 100.0% identity (100.0% similar) in 1077 aa overlap (1-1077:1-1077)
10 20 30 40 50 60
pF1KB5 MAERGGDGGESERFNPGELRMAQQQALRFRGPAPPPNAVMRGPPPLMRPPPPFGMMRGPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MAERGGDGGESERFNPGELRMAQQQALRFRGPAPPPNAVMRGPPPLMRPPPPFGMMRGPP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 PPPRPPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFMPPPMSSMPPPPGMMFPPGMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PPPRPPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFMPPPMSSMPPPPGMMFPPGMP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 PVTAPGTPALPPTEEIWVENKTPDGKVYYYNARTRESAWTKPDGVKVIQQSELTPMLAAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PVTAPGTPALPPTEEIWVENKTPDGKVYYYNARTRESAWTKPDGVKVIQQSELTPMLAAQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 AQVQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 AQVQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 AQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTATSVAQTVSTPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 AQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTATSVAQTVSTPT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 TQDQTPSSAVSVATPTVSVSTPAPTATPVQTVPQPHPQTLPPAVPHSVPQPTTAIPAFPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 TQDQTPSSAVSVATPTVSVSTPAPTATPVQTVPQPHPQTLPPAVPHSVPQPTTAIPAFPP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 VMVPPFRVPLPGMPIPLPGVLPGMAPPIVPMIHPQVAIAASPATLAGATAVSEWTEYKTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VMVPPFRVPLPGMPIPLPGVLPGMAPPIVPMIHPQVAIAASPATLAGATAVSEWTEYKTA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 DGKTYYYNNRTLESTWEKPQELKEKEKLEEKIKEPIKEPSEEPLPMETEEEDPKEEPIKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 DGKTYYYNNRTLESTWEKPQELKEKEKLEEKIKEPIKEPSEEPLPMETEEEDPKEEPIKE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 IKEEPKEEEMTEEEKAAQKAKPVATAPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRPDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 IKEEPKEEEMTEEEKAAQKAKPVATAPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRPDD
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB5 LIGRADVDKIIQEPPHKKGMEELKKLRHPTPTMLSIQKWQFSMSAIKEEQELMEEINEDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LIGRADVDKIIQEPPHKKGMEELKKLRHPTPTMLSIQKWQFSMSAIKEEQELMEEINEDE
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB5 PVKAKKRKRDDNKDIDSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFSTW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PVKAKKRKRDDNKDIDSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFSTW
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB5 EKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERREKKNKIMQAKEDFKKMMEEAKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 EKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERREKKNKIMQAKEDFKKMMEEAKF
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB5 NPRATFSEFAAKHAKDSRFKAIEKMKDREALFNEFVAAARKKEKEDSKTRGEKIKSDFFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 NPRATFSEFAAKHAKDSRFKAIEKMKDREALFNEFVAAARKKEKEDSKTRGEKIKSDFFE
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB5 LLSNHHLDSQSRWSKVKDKVESDPRYKAVDSSSMREDLFKQYIEKIAKNLDSEKEKELER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LLSNHHLDSQSRWSKVKDKVESDPRYKAVDSSSMREDLFKQYIEKIAKNLDSEKEKELER
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB5 QARIEASLREREREVQKARSEQTKEIDREREQHKREEAIQNFKALLSDMVRSSDVSWSDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 QARIEASLREREREVQKARSEQTKEIDREREQHKREEAIQNFKALLSDMVRSSDVSWSDT
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB5 RRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREHFRQLLDETSAITLTSTWKEVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 RRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREHFRQLLDETSAITLTSTWKEVK
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB5 KIIKEDPRCIKFSSSDRKKQREFEEYIRDKYITAKADFRTLLKETKFITYRSKKLIQESD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KIIKEDPRCIKFSSSDRKKQREFEEYIRDKYITAKADFRTLLKETKFITYRSKKLIQESD
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070
pF1KB5 QHLKDVEKILQNDKRYLVLDCVPEERRKLIVAYVDDLDRRGPPPPPTASEPTRRSTK
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 QHLKDVEKILQNDKRYLVLDCVPEERRKLIVAYVDDLDRRGPPPPPTASEPTRRSTK
1030 1040 1050 1060 1070
>>CCDS4282.1 TCERG1 gene_id:10915|Hs108|chr5 (1098 aa)
initn: 4574 init1: 4574 opt: 5317 Z-score: 2039.2 bits: 389.1 E(32554): 2.9e-107
Smith-Waterman score: 7147; 98.1% identity (98.1% similar) in 1098 aa overlap (1-1077:1-1098)
10 20 30 40 50 60
pF1KB5 MAERGGDGGESERFNPGELRMAQQQALRFRGPAPPPNAVMRGPPPLMRPPPPFGMMRGPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MAERGGDGGESERFNPGELRMAQQQALRFRGPAPPPNAVMRGPPPLMRPPPPFGMMRGPP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 PPPRPPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFMPPPMSSMPPPPGMMFPPGMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 PPPRPPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFMPPPMSSMPPPPGMMFPPGMP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 PVTAPGTPALPPTEEIWVENKTPDGKVYYYNARTRESAWTKPDGVKVIQQSELTPMLAAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 PVTAPGTPALPPTEEIWVENKTPDGKVYYYNARTRESAWTKPDGVKVIQQSELTPMLAAQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 AQVQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 AQVQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 AQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTATSVAQTVSTPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 AQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTATSVAQTVSTPT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 TQDQTPSSAVSVATPTVSVSTPAPTATPVQTVPQPHPQTLPPAVPHSVPQPTTAIPAFPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 TQDQTPSSAVSVATPTVSVSTPAPTATPVQTVPQPHPQTLPPAVPHSVPQPTTAIPAFPP
310 320 330 340 350 360
370 380 390
pF1KB5 VMVPPFRVPLPGMPIPLPGV---------------------LPGMAPPIVPMIHPQVAIA
:::::::::::::::::::: :::::::::::::::::::
CCDS42 VMVPPFRVPLPGMPIPLPGVAMMQIVSCPYVKTVATTKTGVLPGMAPPIVPMIHPQVAIA
370 380 390 400 410 420
400 410 420 430 440 450
pF1KB5 ASPATLAGATAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKLEEKIKEPIKEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 ASPATLAGATAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKLEEKIKEPIKEP
430 440 450 460 470 480
460 470 480 490 500 510
pF1KB5 SEEPLPMETEEEDPKEEPIKEIKEEPKEEEMTEEEKAAQKAKPVATAPIPGTPWCVVWTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 SEEPLPMETEEEDPKEEPIKEIKEEPKEEEMTEEEKAAQKAKPVATAPIPGTPWCVVWTG
490 500 510 520 530 540
520 530 540 550 560 570
pF1KB5 DERVFFYNPTTRLSMWDRPDDLIGRADVDKIIQEPPHKKGMEELKKLRHPTPTMLSIQKW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 DERVFFYNPTTRLSMWDRPDDLIGRADVDKIIQEPPHKKGMEELKKLRHPTPTMLSIQKW
550 560 570 580 590 600
580 590 600 610 620 630
pF1KB5 QFSMSAIKEEQELMEEINEDEPVKAKKRKRDDNKDIDSEKEAAMEAEIKAARERAIVPLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 QFSMSAIKEEQELMEEINEDEPVKAKKRKRDDNKDIDSEKEAAMEAEIKAARERAIVPLE
610 620 630 640 650 660
640 650 660 670 680 690
pF1KB5 ARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 ARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERRE
670 680 690 700 710 720
700 710 720 730 740 750
pF1KB5 KKNKIMQAKEDFKKMMEEAKFNPRATFSEFAAKHAKDSRFKAIEKMKDREALFNEFVAAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 KKNKIMQAKEDFKKMMEEAKFNPRATFSEFAAKHAKDSRFKAIEKMKDREALFNEFVAAA
730 740 750 760 770 780
760 770 780 790 800 810
pF1KB5 RKKEKEDSKTRGEKIKSDFFELLSNHHLDSQSRWSKVKDKVESDPRYKAVDSSSMREDLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 RKKEKEDSKTRGEKIKSDFFELLSNHHLDSQSRWSKVKDKVESDPRYKAVDSSSMREDLF
790 800 810 820 830 840
820 830 840 850 860 870
pF1KB5 KQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARSEQTKEIDREREQHKREEAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 KQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARSEQTKEIDREREQHKREEAI
850 860 870 880 890 900
880 890 900 910 920 930
pF1KB5 QNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 QNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREH
910 920 930 940 950 960
940 950 960 970 980 990
pF1KB5 FRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEEYIRDKYITAKADFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 FRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEEYIRDKYITAKADFR
970 980 990 1000 1010 1020
1000 1010 1020 1030 1040 1050
pF1KB5 TLLKETKFITYRSKKLIQESDQHLKDVEKILQNDKRYLVLDCVPEERRKLIVAYVDDLDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 TLLKETKFITYRSKKLIQESDQHLKDVEKILQNDKRYLVLDCVPEERRKLIVAYVDDLDR
1030 1040 1050 1060 1070 1080
1060 1070
pF1KB5 RGPPPPPTASEPTRRSTK
::::::::::::::::::
CCDS42 RGPPPPPTASEPTRRSTK
1090
1077 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 23:03:27 2016 done: Wed Nov 2 23:03:28 2016
Total Scan time: 3.940 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]