FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB5643, 72 aa 1>>>pF1KB5643 72 - 72 aa - 72 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.9560+/-0.000284; mu= 8.1223+/- 0.018 mean_var=47.8233+/- 9.586, 0's: 0 Z-trim(116.9): 52 B-trim: 0 in 0/52 Lambda= 0.185462 statistics sampled from 28395 (28470) to 28395 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.758), E-opt: 0.2 (0.334), width: 16 Scan time: 3.360 The best scores are: opt bits E(85289) XP_016857298 (OMIM: 615405) PREDICTED: guanine nuc ( 72) 451 127.6 1.7e-30 XP_016857299 (OMIM: 615405) PREDICTED: guanine nuc ( 72) 451 127.6 1.7e-30 XP_016857300 (OMIM: 615405) PREDICTED: guanine nuc ( 72) 451 127.6 1.7e-30 NP_061329 (OMIM: 615405) guanine nucleotide-bindin ( 72) 451 127.6 1.7e-30 XP_016882095 (OMIM: 604430) PREDICTED: guanine nuc ( 68) 363 104.0 2e-23 NP_443079 (OMIM: 604430) guanine nucleotide-bindin ( 68) 363 104.0 2e-23 NP_444292 (OMIM: 606981) guanine nucleotide-bindin ( 71) 291 84.8 1.3e-17 XP_016876865 (OMIM: 606981) PREDICTED: guanine nuc ( 71) 291 84.8 1.3e-17 NP_001230702 (OMIM: 606981) guanine nucleotide-bin ( 71) 291 84.8 1.3e-17 XP_016876866 (OMIM: 606981) PREDICTED: guanine nuc ( 71) 291 84.8 1.3e-17 XP_011535148 (OMIM: 606981) PREDICTED: guanine nuc ( 71) 291 84.8 1.3e-17 XP_006720236 (OMIM: 606981) PREDICTED: guanine nuc ( 71) 291 84.8 1.3e-17 NP_001230703 (OMIM: 606981) guanine nucleotide-bin ( 71) 291 84.8 1.3e-17 XP_006711824 (OMIM: 604388) PREDICTED: guanine nuc ( 75) 280 81.8 1.1e-16 NP_001092192 (OMIM: 604388) guanine nucleotide-bin ( 75) 280 81.8 1.1e-16 NP_001092191 (OMIM: 604388) guanine nucleotide-bin ( 75) 280 81.8 1.1e-16 NP_004476 (OMIM: 604388) guanine nucleotide-bindin ( 75) 280 81.8 1.1e-16 XP_011542469 (OMIM: 604388) PREDICTED: guanine nuc ( 75) 280 81.8 1.1e-16 NP_036334 (OMIM: 608941) guanine nucleotide-bindin ( 75) 272 79.7 4.7e-16 XP_006718563 (OMIM: 608941) PREDICTED: guanine nuc ( 75) 272 79.7 4.7e-16 NP_005265 (OMIM: 600874) guanine nucleotide-bindin ( 68) 234 69.5 5e-13 NP_001185593 (OMIM: 604389) guanine nucleotide-bin ( 68) 222 66.3 4.6e-12 NP_001017998 (OMIM: 604389) guanine nucleotide-bin ( 68) 222 66.3 4.6e-12 NP_004117 (OMIM: 604390) guanine nucleotide-bindin ( 73) 181 55.3 9.8e-09 NP_113686 (OMIM: 139391) guanine nucleotide-bindin ( 69) 167 51.6 1.3e-07 NP_001185685 (OMIM: 139391) guanine nucleotide-bin ( 69) 167 51.6 1.3e-07 NP_001185684 (OMIM: 139391) guanine nucleotide-bin ( 69) 167 51.6 1.3e-07 NP_001185683 (OMIM: 139391) guanine nucleotide-bin ( 69) 167 51.6 1.3e-07 NP_001316355 (OMIM: 189970) guanine nucleotide-bin ( 74) 158 49.2 7.1e-07 NP_068774 (OMIM: 189970) guanine nucleotide-bindin ( 74) 158 49.2 7.1e-07 >>XP_016857298 (OMIM: 615405) PREDICTED: guanine nucleot (72 aa) initn: 451 init1: 451 opt: 451 Z-score: 668.3 bits: 127.6 E(85289): 1.7e-30 Smith-Waterman score: 451; 100.0% identity (100.0% similar) in 72 aa overlap (1-72:1-72) 10 20 30 40 50 60 pF1KB5 MSSKTASTNNIAQARRTVQQLRLEASIERIKVSKASADLMSYCEEHARSDPLLIGIPTSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MSSKTASTNNIAQARRTVQQLRLEASIERIKVSKASADLMSYCEEHARSDPLLIGIPTSE 10 20 30 40 50 60 70 pF1KB5 NPFKDKKTCIIL :::::::::::: XP_016 NPFKDKKTCIIL 70 >>XP_016857299 (OMIM: 615405) PREDICTED: guanine nucleot (72 aa) initn: 451 init1: 451 opt: 451 Z-score: 668.3 bits: 127.6 E(85289): 1.7e-30 Smith-Waterman score: 451; 100.0% identity (100.0% similar) in 72 aa overlap (1-72:1-72) 10 20 30 40 50 60 pF1KB5 MSSKTASTNNIAQARRTVQQLRLEASIERIKVSKASADLMSYCEEHARSDPLLIGIPTSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MSSKTASTNNIAQARRTVQQLRLEASIERIKVSKASADLMSYCEEHARSDPLLIGIPTSE 10 20 30 40 50 60 70 pF1KB5 NPFKDKKTCIIL :::::::::::: XP_016 NPFKDKKTCIIL 70 >>XP_016857300 (OMIM: 615405) PREDICTED: guanine nucleot (72 aa) initn: 451 init1: 451 opt: 451 Z-score: 668.3 bits: 127.6 E(85289): 1.7e-30 Smith-Waterman score: 451; 100.0% identity (100.0% similar) in 72 aa overlap (1-72:1-72) 10 20 30 40 50 60 pF1KB5 MSSKTASTNNIAQARRTVQQLRLEASIERIKVSKASADLMSYCEEHARSDPLLIGIPTSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MSSKTASTNNIAQARRTVQQLRLEASIERIKVSKASADLMSYCEEHARSDPLLIGIPTSE 10 20 30 40 50 60 70 pF1KB5 NPFKDKKTCIIL :::::::::::: XP_016 NPFKDKKTCIIL 70 >>NP_061329 (OMIM: 615405) guanine nucleotide-binding pr (72 aa) initn: 451 init1: 451 opt: 451 Z-score: 668.3 bits: 127.6 E(85289): 1.7e-30 Smith-Waterman score: 451; 100.0% identity (100.0% similar) in 72 aa overlap (1-72:1-72) 10 20 30 40 50 60 pF1KB5 MSSKTASTNNIAQARRTVQQLRLEASIERIKVSKASADLMSYCEEHARSDPLLIGIPTSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_061 MSSKTASTNNIAQARRTVQQLRLEASIERIKVSKASADLMSYCEEHARSDPLLIGIPTSE 10 20 30 40 50 60 70 pF1KB5 NPFKDKKTCIIL :::::::::::: NP_061 NPFKDKKTCIIL 70 >>XP_016882095 (OMIM: 604430) PREDICTED: guanine nucleot (68 aa) initn: 363 init1: 363 opt: 363 Z-score: 541.5 bits: 104.0 E(85289): 2e-23 Smith-Waterman score: 363; 77.6% identity (97.0% similar) in 67 aa overlap (6-72:2-68) 10 20 30 40 50 60 pF1KB5 MSSKTASTNNIAQARRTVQQLRLEASIERIKVSKASADLMSYCEEHARSDPLLIGIPTSE ..::::::::. :.:::.::.:::::::::..:::::::.:::.::::.:.:.:: XP_016 MSATNNIAQARKLVEQLRIEAGIERIKVSKAASDLMSYCEQHARNDPLLVGVPASE 10 20 30 40 50 70 pF1KB5 NPFKDKKTCIIL ::::::: :::: XP_016 NPFKDKKPCIIL 60 >>NP_443079 (OMIM: 604430) guanine nucleotide-binding pr (68 aa) initn: 363 init1: 363 opt: 363 Z-score: 541.5 bits: 104.0 E(85289): 2e-23 Smith-Waterman score: 363; 77.6% identity (97.0% similar) in 67 aa overlap (6-72:2-68) 10 20 30 40 50 60 pF1KB5 MSSKTASTNNIAQARRTVQQLRLEASIERIKVSKASADLMSYCEEHARSDPLLIGIPTSE ..::::::::. :.:::.::.:::::::::..:::::::.:::.::::.:.:.:: NP_443 MSATNNIAQARKLVEQLRIEAGIERIKVSKAASDLMSYCEQHARNDPLLVGVPASE 10 20 30 40 50 70 pF1KB5 NPFKDKKTCIIL ::::::: :::: NP_443 NPFKDKKPCIIL 60 >>NP_444292 (OMIM: 606981) guanine nucleotide-binding pr (71 aa) initn: 291 init1: 283 opt: 291 Z-score: 437.1 bits: 84.8 E(85289): 1.3e-17 Smith-Waterman score: 291; 62.3% identity (85.5% similar) in 69 aa overlap (5-72:3-71) 10 20 30 40 50 60 pF1KB5 MSSKTASTNNIAQARRTVQQLRLEASIERIKVSKASADLMSYCEEHARSDPLLIGIPTSE . .: .:::::. :.::..::.:.:::::::.::::.::: ::. :::: .:.:: NP_444 MASNNTASIAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTPVPASE 10 20 30 40 50 70 pF1KB5 NPFKDKKT-CIIL :::..:: : :: NP_444 NPFREKKFFCAIL 60 70 >>XP_016876865 (OMIM: 606981) PREDICTED: guanine nucleot (71 aa) initn: 291 init1: 283 opt: 291 Z-score: 437.1 bits: 84.8 E(85289): 1.3e-17 Smith-Waterman score: 291; 62.3% identity (85.5% similar) in 69 aa overlap (5-72:3-71) 10 20 30 40 50 60 pF1KB5 MSSKTASTNNIAQARRTVQQLRLEASIERIKVSKASADLMSYCEEHARSDPLLIGIPTSE . .: .:::::. :.::..::.:.:::::::.::::.::: ::. :::: .:.:: XP_016 MASNNTASIAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTPVPASE 10 20 30 40 50 70 pF1KB5 NPFKDKKT-CIIL :::..:: : :: XP_016 NPFREKKFFCAIL 60 70 >>NP_001230702 (OMIM: 606981) guanine nucleotide-binding (71 aa) initn: 291 init1: 283 opt: 291 Z-score: 437.1 bits: 84.8 E(85289): 1.3e-17 Smith-Waterman score: 291; 62.3% identity (85.5% similar) in 69 aa overlap (5-72:3-71) 10 20 30 40 50 60 pF1KB5 MSSKTASTNNIAQARRTVQQLRLEASIERIKVSKASADLMSYCEEHARSDPLLIGIPTSE . .: .:::::. :.::..::.:.:::::::.::::.::: ::. :::: .:.:: NP_001 MASNNTASIAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTPVPASE 10 20 30 40 50 70 pF1KB5 NPFKDKKT-CIIL :::..:: : :: NP_001 NPFREKKFFCAIL 60 70 >>XP_016876866 (OMIM: 606981) PREDICTED: guanine nucleot (71 aa) initn: 291 init1: 283 opt: 291 Z-score: 437.1 bits: 84.8 E(85289): 1.3e-17 Smith-Waterman score: 291; 62.3% identity (85.5% similar) in 69 aa overlap (5-72:3-71) 10 20 30 40 50 60 pF1KB5 MSSKTASTNNIAQARRTVQQLRLEASIERIKVSKASADLMSYCEEHARSDPLLIGIPTSE . .: .:::::. :.::..::.:.:::::::.::::.::: ::. :::: .:.:: XP_016 MASNNTASIAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTPVPASE 10 20 30 40 50 70 pF1KB5 NPFKDKKT-CIIL :::..:: : :: XP_016 NPFREKKFFCAIL 60 70 72 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Fri Nov 4 04:00:18 2016 done: Fri Nov 4 04:00:18 2016 Total Scan time: 3.360 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]