Result of FASTA (omim) for
pF1KB5651
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5651, 400 aa
1>>>pF1KB5651 400 - 400 aa - 400 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.0291+/-0.000311; mu= 0.3884+/- 0.019
mean_var=209.0335+/-42.027, 0's: 0 Z-trim(123.5): 79 B-trim: 47 in 1/59
Lambda= 0.088709
statistics sampled from 43427 (43563) to 43427 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.809), E-opt: 0.2 (0.511), width: 16
Scan time: 7.680
The best scores are: opt bits E(85289)
XP_016861610 (OMIM: 607392) PREDICTED: WW domain-c ( 400) 2750 364.1 3.5e-100
XP_016861611 (OMIM: 607392) PREDICTED: WW domain-c ( 400) 2750 364.1 3.5e-100
NP_001161752 (OMIM: 607392) WW domain-containing t ( 400) 2750 364.1 3.5e-100
NP_056287 (OMIM: 607392) WW domain-containing tran ( 400) 2750 364.1 3.5e-100
NP_001161750 (OMIM: 607392) WW domain-containing t ( 400) 2750 364.1 3.5e-100
NP_001269027 (OMIM: 120433,606608) transcriptional ( 454) 881 124.9 3.9e-28
NP_001269026 (OMIM: 120433,606608) transcriptional ( 466) 872 123.8 8.8e-28
NP_001269028 (OMIM: 120433,606608) transcriptional ( 470) 862 122.5 2.2e-27
XP_016872582 (OMIM: 120433,606608) PREDICTED: tran ( 310) 617 91.0 4.3e-18
NP_001269029 (OMIM: 120433,606608) transcriptional ( 492) 616 91.0 6.7e-18
XP_005271438 (OMIM: 120433,606608) PREDICTED: tran ( 494) 609 90.1 1.3e-17
NP_001181974 (OMIM: 120433,606608) transcriptional ( 326) 488 74.5 4.1e-13
NP_006097 (OMIM: 120433,606608) transcriptional co ( 450) 487 74.5 5.8e-13
XP_011540858 (OMIM: 120433,606608) PREDICTED: tran ( 330) 466 71.7 2.9e-12
XP_011540857 (OMIM: 120433,606608) PREDICTED: tran ( 332) 463 71.3 3.8e-12
NP_001123617 (OMIM: 120433,606608) transcriptional ( 504) 440 68.5 4.1e-11
XP_005271440 (OMIM: 120433,606608) PREDICTED: tran ( 490) 422 66.2 2e-10
NP_001181973 (OMIM: 120433,606608) transcriptional ( 488) 420 65.9 2.4e-10
NP_001269030 (OMIM: 120433,606608) transcriptional ( 508) 419 65.8 2.7e-10
XP_005271435 (OMIM: 120433,606608) PREDICTED: tran ( 510) 419 65.8 2.7e-10
XP_005271437 (OMIM: 120433,606608) PREDICTED: tran ( 506) 414 65.2 4.2e-10
>>XP_016861610 (OMIM: 607392) PREDICTED: WW domain-conta (400 aa)
initn: 2750 init1: 2750 opt: 2750 Z-score: 1919.6 bits: 364.1 E(85289): 3.5e-100
Smith-Waterman score: 2750; 100.0% identity (100.0% similar) in 400 aa overlap (1-400:1-400)
10 20 30 40 50 60
pF1KB5 MNPASAPPPLPPPGQQVIHVTQDLDTDLEALFNSVMNPKPSSWRKKILPESFFKEPDSGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNPASAPPPLPPPGQQVIHVTQDLDTDLEALFNSVMNPKPSSWRKKILPESFFKEPDSGS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 HSRQSSTDSSGGHPGPRLAGGAQHVRSHSSPASLQLGTGAGAAGSPAQQHAHLRQQSYDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HSRQSSTDSSGGHPGPRLAGGAQHVRSHSSPASLQLGTGAGAAGSPAQQHAHLRQQSYDV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 TDELPLPPGWEMTFTATGQRYFLNHIEKITTWQDPRKAMNQPLNHMNLHPAVSSTPVPQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TDELPLPPGWEMTFTATGQRYFLNHIEKITTWQDPRKAMNQPLNHMNLHPAVSSTPVPQR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 SMAVSQPNLVMNHQHQQQMAPSTLSQQNHPTQNPPAGLMSMPNALTTQQQQQQKLRLQRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SMAVSQPNLVMNHQHQQQMAPSTLSQQNHPTQNPPAGLMSMPNALTTQQQQQQKLRLQRI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 QMERERIRMRQEELMRQEAALCRQLPMEAETLAPVQAAVNPPTMTPDMRSITNNSSDPFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QMERERIRMRQEELMRQEAALCRQLPMEAETLAPVQAAVNPPTMTPDMRSITNNSSDPFL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 NGGPYHSREQSTDSGLGLGCYSVPTTPEDFLSNVDEMDTGENAGQTPMNINPQQTRFPDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NGGPYHSREQSTDSGLGLGCYSVPTTPEDFLSNVDEMDTGENAGQTPMNINPQQTRFPDF
310 320 330 340 350 360
370 380 390 400
pF1KB5 LDCLPGTNVDLGTLESEDLIPLFNDVESALNKSEPFLTWL
::::::::::::::::::::::::::::::::::::::::
XP_016 LDCLPGTNVDLGTLESEDLIPLFNDVESALNKSEPFLTWL
370 380 390 400
>>XP_016861611 (OMIM: 607392) PREDICTED: WW domain-conta (400 aa)
initn: 2750 init1: 2750 opt: 2750 Z-score: 1919.6 bits: 364.1 E(85289): 3.5e-100
Smith-Waterman score: 2750; 100.0% identity (100.0% similar) in 400 aa overlap (1-400:1-400)
10 20 30 40 50 60
pF1KB5 MNPASAPPPLPPPGQQVIHVTQDLDTDLEALFNSVMNPKPSSWRKKILPESFFKEPDSGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNPASAPPPLPPPGQQVIHVTQDLDTDLEALFNSVMNPKPSSWRKKILPESFFKEPDSGS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 HSRQSSTDSSGGHPGPRLAGGAQHVRSHSSPASLQLGTGAGAAGSPAQQHAHLRQQSYDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HSRQSSTDSSGGHPGPRLAGGAQHVRSHSSPASLQLGTGAGAAGSPAQQHAHLRQQSYDV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 TDELPLPPGWEMTFTATGQRYFLNHIEKITTWQDPRKAMNQPLNHMNLHPAVSSTPVPQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TDELPLPPGWEMTFTATGQRYFLNHIEKITTWQDPRKAMNQPLNHMNLHPAVSSTPVPQR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 SMAVSQPNLVMNHQHQQQMAPSTLSQQNHPTQNPPAGLMSMPNALTTQQQQQQKLRLQRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SMAVSQPNLVMNHQHQQQMAPSTLSQQNHPTQNPPAGLMSMPNALTTQQQQQQKLRLQRI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 QMERERIRMRQEELMRQEAALCRQLPMEAETLAPVQAAVNPPTMTPDMRSITNNSSDPFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QMERERIRMRQEELMRQEAALCRQLPMEAETLAPVQAAVNPPTMTPDMRSITNNSSDPFL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 NGGPYHSREQSTDSGLGLGCYSVPTTPEDFLSNVDEMDTGENAGQTPMNINPQQTRFPDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NGGPYHSREQSTDSGLGLGCYSVPTTPEDFLSNVDEMDTGENAGQTPMNINPQQTRFPDF
310 320 330 340 350 360
370 380 390 400
pF1KB5 LDCLPGTNVDLGTLESEDLIPLFNDVESALNKSEPFLTWL
::::::::::::::::::::::::::::::::::::::::
XP_016 LDCLPGTNVDLGTLESEDLIPLFNDVESALNKSEPFLTWL
370 380 390 400
>>NP_001161752 (OMIM: 607392) WW domain-containing trans (400 aa)
initn: 2750 init1: 2750 opt: 2750 Z-score: 1919.6 bits: 364.1 E(85289): 3.5e-100
Smith-Waterman score: 2750; 100.0% identity (100.0% similar) in 400 aa overlap (1-400:1-400)
10 20 30 40 50 60
pF1KB5 MNPASAPPPLPPPGQQVIHVTQDLDTDLEALFNSVMNPKPSSWRKKILPESFFKEPDSGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNPASAPPPLPPPGQQVIHVTQDLDTDLEALFNSVMNPKPSSWRKKILPESFFKEPDSGS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 HSRQSSTDSSGGHPGPRLAGGAQHVRSHSSPASLQLGTGAGAAGSPAQQHAHLRQQSYDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HSRQSSTDSSGGHPGPRLAGGAQHVRSHSSPASLQLGTGAGAAGSPAQQHAHLRQQSYDV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 TDELPLPPGWEMTFTATGQRYFLNHIEKITTWQDPRKAMNQPLNHMNLHPAVSSTPVPQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TDELPLPPGWEMTFTATGQRYFLNHIEKITTWQDPRKAMNQPLNHMNLHPAVSSTPVPQR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 SMAVSQPNLVMNHQHQQQMAPSTLSQQNHPTQNPPAGLMSMPNALTTQQQQQQKLRLQRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SMAVSQPNLVMNHQHQQQMAPSTLSQQNHPTQNPPAGLMSMPNALTTQQQQQQKLRLQRI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 QMERERIRMRQEELMRQEAALCRQLPMEAETLAPVQAAVNPPTMTPDMRSITNNSSDPFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QMERERIRMRQEELMRQEAALCRQLPMEAETLAPVQAAVNPPTMTPDMRSITNNSSDPFL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 NGGPYHSREQSTDSGLGLGCYSVPTTPEDFLSNVDEMDTGENAGQTPMNINPQQTRFPDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NGGPYHSREQSTDSGLGLGCYSVPTTPEDFLSNVDEMDTGENAGQTPMNINPQQTRFPDF
310 320 330 340 350 360
370 380 390 400
pF1KB5 LDCLPGTNVDLGTLESEDLIPLFNDVESALNKSEPFLTWL
::::::::::::::::::::::::::::::::::::::::
NP_001 LDCLPGTNVDLGTLESEDLIPLFNDVESALNKSEPFLTWL
370 380 390 400
>>NP_056287 (OMIM: 607392) WW domain-containing transcri (400 aa)
initn: 2750 init1: 2750 opt: 2750 Z-score: 1919.6 bits: 364.1 E(85289): 3.5e-100
Smith-Waterman score: 2750; 100.0% identity (100.0% similar) in 400 aa overlap (1-400:1-400)
10 20 30 40 50 60
pF1KB5 MNPASAPPPLPPPGQQVIHVTQDLDTDLEALFNSVMNPKPSSWRKKILPESFFKEPDSGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 MNPASAPPPLPPPGQQVIHVTQDLDTDLEALFNSVMNPKPSSWRKKILPESFFKEPDSGS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 HSRQSSTDSSGGHPGPRLAGGAQHVRSHSSPASLQLGTGAGAAGSPAQQHAHLRQQSYDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 HSRQSSTDSSGGHPGPRLAGGAQHVRSHSSPASLQLGTGAGAAGSPAQQHAHLRQQSYDV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 TDELPLPPGWEMTFTATGQRYFLNHIEKITTWQDPRKAMNQPLNHMNLHPAVSSTPVPQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 TDELPLPPGWEMTFTATGQRYFLNHIEKITTWQDPRKAMNQPLNHMNLHPAVSSTPVPQR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 SMAVSQPNLVMNHQHQQQMAPSTLSQQNHPTQNPPAGLMSMPNALTTQQQQQQKLRLQRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 SMAVSQPNLVMNHQHQQQMAPSTLSQQNHPTQNPPAGLMSMPNALTTQQQQQQKLRLQRI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 QMERERIRMRQEELMRQEAALCRQLPMEAETLAPVQAAVNPPTMTPDMRSITNNSSDPFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 QMERERIRMRQEELMRQEAALCRQLPMEAETLAPVQAAVNPPTMTPDMRSITNNSSDPFL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 NGGPYHSREQSTDSGLGLGCYSVPTTPEDFLSNVDEMDTGENAGQTPMNINPQQTRFPDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 NGGPYHSREQSTDSGLGLGCYSVPTTPEDFLSNVDEMDTGENAGQTPMNINPQQTRFPDF
310 320 330 340 350 360
370 380 390 400
pF1KB5 LDCLPGTNVDLGTLESEDLIPLFNDVESALNKSEPFLTWL
::::::::::::::::::::::::::::::::::::::::
NP_056 LDCLPGTNVDLGTLESEDLIPLFNDVESALNKSEPFLTWL
370 380 390 400
>>NP_001161750 (OMIM: 607392) WW domain-containing trans (400 aa)
initn: 2750 init1: 2750 opt: 2750 Z-score: 1919.6 bits: 364.1 E(85289): 3.5e-100
Smith-Waterman score: 2750; 100.0% identity (100.0% similar) in 400 aa overlap (1-400:1-400)
10 20 30 40 50 60
pF1KB5 MNPASAPPPLPPPGQQVIHVTQDLDTDLEALFNSVMNPKPSSWRKKILPESFFKEPDSGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNPASAPPPLPPPGQQVIHVTQDLDTDLEALFNSVMNPKPSSWRKKILPESFFKEPDSGS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 HSRQSSTDSSGGHPGPRLAGGAQHVRSHSSPASLQLGTGAGAAGSPAQQHAHLRQQSYDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HSRQSSTDSSGGHPGPRLAGGAQHVRSHSSPASLQLGTGAGAAGSPAQQHAHLRQQSYDV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 TDELPLPPGWEMTFTATGQRYFLNHIEKITTWQDPRKAMNQPLNHMNLHPAVSSTPVPQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TDELPLPPGWEMTFTATGQRYFLNHIEKITTWQDPRKAMNQPLNHMNLHPAVSSTPVPQR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 SMAVSQPNLVMNHQHQQQMAPSTLSQQNHPTQNPPAGLMSMPNALTTQQQQQQKLRLQRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SMAVSQPNLVMNHQHQQQMAPSTLSQQNHPTQNPPAGLMSMPNALTTQQQQQQKLRLQRI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 QMERERIRMRQEELMRQEAALCRQLPMEAETLAPVQAAVNPPTMTPDMRSITNNSSDPFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QMERERIRMRQEELMRQEAALCRQLPMEAETLAPVQAAVNPPTMTPDMRSITNNSSDPFL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 NGGPYHSREQSTDSGLGLGCYSVPTTPEDFLSNVDEMDTGENAGQTPMNINPQQTRFPDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NGGPYHSREQSTDSGLGLGCYSVPTTPEDFLSNVDEMDTGENAGQTPMNINPQQTRFPDF
310 320 330 340 350 360
370 380 390 400
pF1KB5 LDCLPGTNVDLGTLESEDLIPLFNDVESALNKSEPFLTWL
::::::::::::::::::::::::::::::::::::::::
NP_001 LDCLPGTNVDLGTLESEDLIPLFNDVESALNKSEPFLTWL
370 380 390 400
>>NP_001269027 (OMIM: 120433,606608) transcriptional coa (454 aa)
initn: 1060 init1: 319 opt: 881 Z-score: 626.1 bits: 124.9 E(85289): 3.9e-28
Smith-Waterman score: 1196; 49.0% identity (69.2% similar) in 441 aa overlap (3-400:38-454)
10 20 30
pF1KB5 MNPAS--APPPLPPPGQQVIHVTQDLDTDLEA
::. : : :: :.:..:: : .:::::
NP_001 PPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGDSETDLEA
10 20 30 40 50 60
40 50 60 70 80
pF1KB5 LFNSVMNPK----PSS--WRKKILPESFFKEPDSGSHSRQSSTDSSGGHPGPRLAGGAQH
:::.::::: :.. : . ::.:::: :. :::::.:::. : : : ::
NP_001 LFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDA--GTAG---ALTPQH
70 80 90 100 110 120
90 100 110 120 130
pF1KB5 VRSHSSPASLQLG---------TG--AGAAGSPAQQHAHLRQQSYDVTDELPLPPGWEMT
::.:::::::::: :: .: :..:. :: :::.:... :..::: ::::.
NP_001 VRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQH--LRQSSFEIPDDVPLPAGWEMA
130 140 150 160 170 180
140 150 160 170 180 190
pF1KB5 FTATGQRYFLNHIEKITTWQDPRKAMNQPLNHMNLHPAVSSTPVPQRSMAVSQPNLVMNH
:..:::::::::.. :::::::::: :..::. : .: :: : : .. .::
NP_001 KTSSGQRYFLNHIDQTTTWQDPRKAM---LSQMNV-TAPTSPPVQQNMMNSAS---AMN-
190 200 210 220 230
200 210 220 230 240 250
pF1KB5 QHQQQMAPSTLSQQNHPTQNPPAGLMSMPNALTTQQQQQQKLRLQRIQMERERIRMRQEE
:. .: :: : :.: .:.:. :. .:::..:::..:::.::.:..:.:
NP_001 QRISQSAPVKQPPPLAP-QSPQGGVMGGSNS-----NQQQQMRLQQLQMEKERLRLKQQE
240 250 260 270 280
260 270 280 290 300
pF1KB5 LMRQ----EAALCRQLPMEAETLAPVQAAVNPPTMTPDMRSITNNSSDPFLNGGPYHSRE
:.:: : :: ::: : . .: :. : :. ..:..:.::::::::.: ::::.
NP_001 LLRQVRPQELALRSQLPT-LEQDGGTQNPVSSPGMSQELRTMTTNSSDPFLNSGTYHSRD
290 300 310 320 330 340
310 320 330 340 350 360
pF1KB5 QSTDSGLGLGCYSVPTTPEDFLSNVDEMDTGENAGQTPMNINPQQTRFPDFLDCLPGTNV
.::::::... :::: ::.:::..:::::::.. .:. . ::.::::.:. .:::::
NP_001 ESTDSGLSMSSYSVPRTPDDFLNSVDEMDTGDTINQSTL--PSQQNRFPDYLEAIPGTNV
350 360 370 380 390 400
370 380 390 400
pF1KB5 DLGTLES-------EDLIP---------LFNDVESALNKS----EPFLTWL
::::::. :.:.: ..::.::.: . : :::::
NP_001 DLGTLEGDGMNIEGEELMPSLQEALSSDILNDMESVLAATKLDKESFLTWL
410 420 430 440 450
>>NP_001269026 (OMIM: 120433,606608) transcriptional coa (466 aa)
initn: 996 init1: 264 opt: 872 Z-score: 619.7 bits: 123.8 E(85289): 8.8e-28
Smith-Waterman score: 1172; 47.7% identity (67.3% similar) in 453 aa overlap (3-400:38-466)
10 20 30
pF1KB5 MNPAS--APPPLPPPGQQVIHVTQDLDTDLEA
::. : : :: :.:..:: : .:::::
NP_001 PPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGDSETDLEA
10 20 30 40 50 60
40 50 60 70 80
pF1KB5 LFNSVMNPK----PSS--WRKKILPESFFKEPDSGSHSRQSSTDSSGGHPGPRLAGGAQH
:::.::::: :.. : . ::.:::: :. :::::.:::. : : : ::
NP_001 LFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDA--GTAG---ALTPQH
70 80 90 100 110 120
90 100 110 120 130
pF1KB5 VRSHSSPASLQLG---------TG--AGAAGSPAQQHAHLRQQSYDVTDELPLPPGWEMT
::.:::::::::: :: .: :..:. :: :::.:... :..::: ::::.
NP_001 VRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQH--LRQSSFEIPDDVPLPAGWEMA
130 140 150 160 170 180
140 150 160 170 180 190
pF1KB5 FTATGQRYFLNHIEKITTWQDPRKAMNQPLNHMNLHPAVSSTPVPQRSMAVSQPNLVMNH
:..:::::::::.. :::::::::: :..::. : .: :: : : .. .::
NP_001 KTSSGQRYFLNHIDQTTTWQDPRKAM---LSQMNV-TAPTSPPVQQNMMNSAS---AMN-
190 200 210 220 230
200 210 220 230 240 250
pF1KB5 QHQQQMAPSTLSQQNHPTQNPPAGLMSMPNALTTQQQQQQKLRLQRIQMERERIRMRQEE
:. .: :: : :.: .:.:. :. .:::..:::..:::.::.:..:.:
NP_001 QRISQSAPVKQPPPLAP-QSPQGGVMGGSNS-----NQQQQMRLQQLQMEKERLRLKQQE
240 250 260 270 280
260 270 280 290
pF1KB5 LMRQ----------------EAALCRQLPMEAETLAPVQAAVNPPTMTPDMRSITNNSSD
:.:: : :: ::: : . .: :. : :. ..:..:.::::
NP_001 LLRQAMRNINPSTANSPKCQELALRSQLPT-LEQDGGTQNPVSSPGMSQELRTMTTNSSD
290 300 310 320 330 340
300 310 320 330 340 350
pF1KB5 PFLNGGPYHSREQSTDSGLGLGCYSVPTTPEDFLSNVDEMDTGENAGQTPMNINPQQTRF
::::.: ::::..::::::... :::: ::.:::..:::::::.. .:. . ::.::
NP_001 PFLNSGTYHSRDESTDSGLSMSSYSVPRTPDDFLNSVDEMDTGDTINQSTL--PSQQNRF
350 360 370 380 390 400
360 370 380 390
pF1KB5 PDFLDCLPGTNVDLGTLES-------EDLIP---------LFNDVESALNKS----EPFL
::.:. .:::::::::::. :.:.: ..::.::.: . : ::
NP_001 PDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSLQEALSSDILNDMESVLAATKLDKESFL
410 420 430 440 450 460
400
pF1KB5 TWL
:::
NP_001 TWL
>>NP_001269028 (OMIM: 120433,606608) transcriptional coa (470 aa)
initn: 1001 init1: 269 opt: 862 Z-score: 612.8 bits: 122.5 E(85289): 2.2e-27
Smith-Waterman score: 1164; 47.3% identity (66.7% similar) in 457 aa overlap (3-400:38-470)
10 20 30
pF1KB5 MNPAS--APPPLPPPGQQVIHVTQDLDTDLEA
::. : : :: :.:..:: : .:::::
NP_001 PPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGDSETDLEA
10 20 30 40 50 60
40 50 60 70 80
pF1KB5 LFNSVMNPK----PSS--WRKKILPESFFKEPDSGSHSRQSSTDSSGGHPGPRLAGGAQH
:::.::::: :.. : . ::.:::: :. :::::.:::. : : : ::
NP_001 LFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDA--GTAG---ALTPQH
70 80 90 100 110 120
90 100 110 120 130
pF1KB5 VRSHSSPASLQLG---------TG--AGAAGSPAQQHAHLRQQSYDVTDELPLPPGWEMT
::.:::::::::: :: .: :..:. :: :::.:... :..::: ::::.
NP_001 VRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQH--LRQSSFEIPDDVPLPAGWEMA
130 140 150 160 170 180
140 150 160 170 180 190
pF1KB5 FTATGQRYFLNHIEKITTWQDPRKAMNQPLNHMNLHPAVSSTPVPQRSMAVSQPNLVMNH
:..:::::::::.. :::::::::: :..::. : .: :: : : .. .::
NP_001 KTSSGQRYFLNHIDQTTTWQDPRKAM---LSQMNV-TAPTSPPVQQNMMNSAS---AMN-
190 200 210 220 230
200 210 220 230 240 250
pF1KB5 QHQQQMAPSTLSQQNHPTQNPPAGLMSMPNALTTQQQQQQKLRLQRIQMERERIRMRQEE
:. .: :: : :.: .:.:. :. .:::..:::..:::.::.:..:.:
NP_001 QRISQSAPVKQPPPLAP-QSPQGGVMGGSNS-----NQQQQMRLQQLQMEKERLRLKQQE
240 250 260 270 280
260 270 280 290
pF1KB5 LMRQ--------------------EAALCRQLPMEAETLAPVQAAVNPPTMTPDMRSITN
:.:: : :: ::: : . .: :. : :. ..:..:.
NP_001 LLRQVRPQAMRNINPSTANSPKCQELALRSQLPT-LEQDGGTQNPVSSPGMSQELRTMTT
290 300 310 320 330 340
300 310 320 330 340 350
pF1KB5 NSSDPFLNGGPYHSREQSTDSGLGLGCYSVPTTPEDFLSNVDEMDTGENAGQTPMNINPQ
::::::::.: ::::..::::::... :::: ::.:::..:::::::.. .:. . :
NP_001 NSSDPFLNSGTYHSRDESTDSGLSMSSYSVPRTPDDFLNSVDEMDTGDTINQSTL--PSQ
350 360 370 380 390 400
360 370 380 390
pF1KB5 QTRFPDFLDCLPGTNVDLGTLES-------EDLIP---------LFNDVESALNKS----
:.::::.:. .:::::::::::. :.:.: ..::.::.: .
NP_001 QNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSLQEALSSDILNDMESVLAATKLDK
410 420 430 440 450 460
400
pF1KB5 EPFLTWL
: :::::
NP_001 ESFLTWL
470
>>XP_016872582 (OMIM: 120433,606608) PREDICTED: transcri (310 aa)
initn: 739 init1: 260 opt: 617 Z-score: 445.9 bits: 91.0 E(85289): 4.3e-18
Smith-Waterman score: 763; 43.8% identity (68.8% similar) in 317 aa overlap (132-400:1-310)
110 120 130 140 150 160
pF1KB5 AAGSPAQQHAHLRQQSYDVTDELPLPPGWEMTFTATGQRYFLNHIEKITTWQDPRKAMNQ
:. :..:::::::::.. ::::::::::
XP_016 MAKTSSGQRYFLNHIDQTTTWQDPRKAM--
10 20
170 180 190 200
pF1KB5 PLNHMNLHPAVSSTPVPQRSM-------------AVSQPNLV--MNHQHQQ------QMA
:..::. : .: :: : : :..: . . .::... ..
XP_016 -LSQMNV-TAPTSPPVQQNMMNSASGPLPDGWEQAMTQDGEIYYINHKNKTTSWLDPRLD
30 40 50 60 70 80
210 220 230 240 250
pF1KB5 PS-TLSQ---QNHPTQNPPAGLMSMPNALT---TQQQQQQKLRLQRIQMERERIRMRQEE
: ...: :. :...:: . :.. . ....:::..:::..:::.::.:..:.:
XP_016 PRFAMNQRISQSAPVKQPPPLAPQSPQGGVMGGSNSNQQQQMRLQQLQMEKERLRLKQQE
90 100 110 120 130 140
260 270 280 290 300 310
pF1KB5 LMRQEAALCRQLPMEAETLAPVQAAVNPPTMTPDMRSITNNSSDPFLNGGPYHSREQSTD
:.::: :: ::: : . .: :. : :. ..:..:.::::::::.: ::::..:::
XP_016 LLRQELALRSQLPT-LEQDGGTQNPVSSPGMSQELRTMTTNSSDPFLNSGTYHSRDESTD
150 160 170 180 190 200
320 330 340 350 360 370
pF1KB5 SGLGLGCYSVPTTPEDFLSNVDEMDTGENAGQTPMNINPQQTRFPDFLDCLPGTNVDLGT
:::... :::: ::.:::..:::::::.. .:. . ::.::::.:. .:::::::::
XP_016 SGLSMSSYSVPRTPDDFLNSVDEMDTGDTINQSTLP--SQQNRFPDYLEAIPGTNVDLGT
210 220 230 240 250 260
380 390 400
pF1KB5 LES-------EDLIP---------LFNDVESALNKS----EPFLTWL
::. :.:.: ..::.::.: . : :::::
XP_016 LEGDGMNIEGEELMPSLQEALSSDILNDMESVLAATKLDKESFLTWL
270 280 290 300 310
>>NP_001269029 (OMIM: 120433,606608) transcriptional coa (492 aa)
initn: 1162 init1: 319 opt: 616 Z-score: 442.3 bits: 91.0 E(85289): 6.7e-18
Smith-Waterman score: 1163; 45.9% identity (67.9% similar) in 464 aa overlap (6-400:43-492)
10 20 30
pF1KB5 MNPASAPPPLPPPGQQVIHVTQDLDTDLEALFNSV
: : :: :.:..:: : .::::::::.:
NP_001 PQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGDSETDLEALFNAV
20 30 40 50 60 70
40 50 60 70 80
pF1KB5 MNPK----PSS--WRKKILPESFFKEPDSGSHSRQSSTDSSGGHPGPRLAGGAQHVRSHS
:::: :.. : . ::.:::: :. :::::.:::. : : : ::::.::
NP_001 MNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDA--GTAG---ALTPQHVRAHS
80 90 100 110 120
90 100 110 120 130
pF1KB5 SPASLQLG---------TG--AGAAGSPAQQHAHLRQQSYDVTDELPLPPGWEMTFTATG
:::::::: :: .: :..:. :: :::.:... :..::: ::::. :..:
NP_001 SPASLQLGAVSPGTLTPTGVVSGPAATPTAQH--LRQSSFEIPDDVPLPAGWEMAKTSSG
130 140 150 160 170 180
140 150 160 170 180
pF1KB5 QRYFLNHIEKITTWQDPRKAMNQPLNHMNLHPAVSSTPVPQRSM-------------AVS
::::::::.. :::::::::: :..::. : .: :: : : :..
NP_001 QRYFLNHIDQTTTWQDPRKAM---LSQMNV-TAPTSPPVQQNMMNSASGPLPDGWEQAMT
190 200 210 220 230 240
190 200 210 220 230
pF1KB5 QPNLV--MNHQHQQ------QMAPS-TLSQ---QNHPTQNPPAGLMSMPNALT---TQQQ
: . . .::... .. : ...: :. :...:: . :.. . ....
NP_001 QDGEIYYINHKNKTTSWLDPRLDPRFAMNQRISQSAPVKQPPPLAPQSPQGGVMGGSNSN
250 260 270 280 290 300
240 250 260 270 280
pF1KB5 QQQKLRLQRIQMERERIRMRQEELMRQ----EAALCRQLPMEAETLAPVQAAVNPPTMTP
:::..:::..:::.::.:..:.::.:: : :: ::: : . .: :. : :.
NP_001 QQQQMRLQQLQMEKERLRLKQQELLRQVRPQELALRSQLPT-LEQDGGTQNPVSSPGMSQ
310 320 330 340 350 360
290 300 310 320 330 340
pF1KB5 DMRSITNNSSDPFLNGGPYHSREQSTDSGLGLGCYSVPTTPEDFLSNVDEMDTGENAGQT
..:..:.::::::::.: ::::..::::::... :::: ::.:::..:::::::.. .:.
NP_001 ELRTMTTNSSDPFLNSGTYHSRDESTDSGLSMSSYSVPRTPDDFLNSVDEMDTGDTINQS
370 380 390 400 410 420
350 360 370 380 390
pF1KB5 PMNINPQQTRFPDFLDCLPGTNVDLGTLES-------EDLIP---------LFNDVESAL
. ::.::::.:. .:::::::::::. :.:.: ..::.::.:
NP_001 TL--PSQQNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSLQEALSSDILNDMESVL
430 440 450 460 470
400
pF1KB5 NKS----EPFLTWL
. : :::::
NP_001 AATKLDKESFLTWL
480 490
400 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 23:04:08 2016 done: Wed Nov 2 23:04:09 2016
Total Scan time: 7.680 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]