FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB5827, 689 aa 1>>>pF1KB5827 689 - 689 aa - 689 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.8930+/-0.000817; mu= 13.2287+/- 0.050 mean_var=103.1085+/-21.133, 0's: 0 Z-trim(111.3): 3 B-trim: 181 in 1/50 Lambda= 0.126307 statistics sampled from 12247 (12249) to 12247 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.728), E-opt: 0.2 (0.376), width: 16 Scan time: 3.270 The best scores are: opt bits E(32554) CCDS42664.1 TMEM214 gene_id:54867|Hs108|chr2 ( 689) 4653 858.4 0 CCDS46242.1 TMEM214 gene_id:54867|Hs108|chr2 ( 644) 3239 600.7 2.2e-171 >>CCDS42664.1 TMEM214 gene_id:54867|Hs108|chr2 (689 aa) initn: 4653 init1: 4653 opt: 4653 Z-score: 4582.6 bits: 858.4 E(32554): 0 Smith-Waterman score: 4653; 100.0% identity (100.0% similar) in 689 aa overlap (1-689:1-689) 10 20 30 40 50 60 pF1KB5 MATKTAGVGRWEVVKKGRRPGVGAGAGGRGGGRNRRALGEANGVWKYDLTPAIQTTSTLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 MATKTAGVGRWEVVKKGRRPGVGAGAGGRGGGRNRRALGEANGVWKYDLTPAIQTTSTLY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB5 ERGFENIMKRQNKEQVPPPAVEPKKPGNKKQPKKVATPPNQNQKQGRFRSLEEALKALDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 ERGFENIMKRQNKEQVPPPAVEPKKPGNKKQPKKVATPPNQNQKQGRFRSLEEALKALDV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB5 ADLQKELDKSQSVFSGNPSIWLKDLASYLNYKLQAPLSEPTLSQHTHDYPYSLVSRELRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 ADLQKELDKSQSVFSGNPSIWLKDLASYLNYKLQAPLSEPTLSQHTHDYPYSLVSRELRG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB5 IIRGLLAKAAGSLELFFDHCLFTMLQELDKTPGESLHGYRICIQAILQDKPKIATANLGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 IIRGLLAKAAGSLELFFDHCLFTMLQELDKTPGESLHGYRICIQAILQDKPKIATANLGK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB5 FLELLRSHQSRPAKCLTIMWALGQAGFANLTEGLKVWLGIMLPVLGIKSLSPFAITYLDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 FLELLRSHQSRPAKCLTIMWALGQAGFANLTEGLKVWLGIMLPVLGIKSLSPFAITYLDR 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB5 LLLMHPNLTKGFGMIGPKDFFPLLDFAYMPNNSLTPSLQEQLCQLYPRLKVLAFGAKPDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 LLLMHPNLTKGFGMIGPKDFFPLLDFAYMPNNSLTPSLQEQLCQLYPRLKVLAFGAKPDS 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB5 TLHTYFPSFLSRATPSCPPEMKKELLSSLTECLTVDPLSASVWRQLYPKHLSQSSLLLEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 TLHTYFPSFLSRATPSCPPEMKKELLSSLTECLTVDPLSASVWRQLYPKHLSQSSLLLEH 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB5 LLSSWEQIPKKVQKSLQETIQSLKLTNQELLRKGSSNNQDVVTCDMACKGLLQQVQGPRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 LLSSWEQIPKKVQKSLQETIQSLKLTNQELLRKGSSNNQDVVTCDMACKGLLQQVQGPRL 430 440 450 460 470 480 490 500 510 520 530 540 pF1KB5 PWTRLLLLLLVFAVGFLCHDLRSHSSFQASLTGRLLRSSGFLPASQQACAKLYSYSLQGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 PWTRLLLLLLVFAVGFLCHDLRSHSSFQASLTGRLLRSSGFLPASQQACAKLYSYSLQGY 490 500 510 520 530 540 550 560 570 580 590 600 pF1KB5 SWLGETLPLWGSHLLTVVRPSLQLAWAHTNATVSFLSAHCASHLAWFGDSLTSLSQRLQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 SWLGETLPLWGSHLLTVVRPSLQLAWAHTNATVSFLSAHCASHLAWFGDSLTSLSQRLQI 550 560 570 580 590 600 610 620 630 640 650 660 pF1KB5 QLPDSVNQLLRYLRELPLLFHQNVLLPLWHLLLEALAWAQEHCHEACRGEVTWDCMKTQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 QLPDSVNQLLRYLRELPLLFHQNVLLPLWHLLLEALAWAQEHCHEACRGEVTWDCMKTQL 610 620 630 640 650 660 670 680 pF1KB5 SEAVHWTWLCLQDITVAFLDWALALISQQ ::::::::::::::::::::::::::::: CCDS42 SEAVHWTWLCLQDITVAFLDWALALISQQ 670 680 >>CCDS46242.1 TMEM214 gene_id:54867|Hs108|chr2 (644 aa) initn: 3239 init1: 3239 opt: 3239 Z-score: 3190.5 bits: 600.7 E(32554): 2.2e-171 Smith-Waterman score: 4257; 93.5% identity (93.5% similar) in 689 aa overlap (1-689:1-644) 10 20 30 40 50 60 pF1KB5 MATKTAGVGRWEVVKKGRRPGVGAGAGGRGGGRNRRALGEANGVWKYDLTPAIQTTSTLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 MATKTAGVGRWEVVKKGRRPGVGAGAGGRGGGRNRRALGEANGVWKYDLTPAIQTTSTLY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB5 ERGFENIMKRQNKEQVPPPAVEPKKPGNKKQPKKVATPPNQNQKQGRFRSLEEALKALDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 ERGFENIMKRQNKEQVPPPAVEPKKPGNKKQPKKVATPPNQNQKQGRFRSLEEALKALDV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB5 ADLQKELDKSQSVFSGNPSIWLKDLASYLNYKLQAPLSEPTLSQHTHDYPYSLVSRELRG ::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 ADLQKELDKSQSVFSGNPSIWLKDLASYLNYKLQAPLSEPTLSQHTH------------- 130 140 150 160 190 200 210 220 230 240 pF1KB5 IIRGLLAKAAGSLELFFDHCLFTMLQELDKTPGESLHGYRICIQAILQDKPKIATANLGK :::::::::::::::::::::::::::: CCDS46 --------------------------------GESLHGYRICIQAILQDKPKIATANLGK 170 180 190 250 260 270 280 290 300 pF1KB5 FLELLRSHQSRPAKCLTIMWALGQAGFANLTEGLKVWLGIMLPVLGIKSLSPFAITYLDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 FLELLRSHQSRPAKCLTIMWALGQAGFANLTEGLKVWLGIMLPVLGIKSLSPFAITYLDR 200 210 220 230 240 250 310 320 330 340 350 360 pF1KB5 LLLMHPNLTKGFGMIGPKDFFPLLDFAYMPNNSLTPSLQEQLCQLYPRLKVLAFGAKPDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 LLLMHPNLTKGFGMIGPKDFFPLLDFAYMPNNSLTPSLQEQLCQLYPRLKVLAFGAKPDS 260 270 280 290 300 310 370 380 390 400 410 420 pF1KB5 TLHTYFPSFLSRATPSCPPEMKKELLSSLTECLTVDPLSASVWRQLYPKHLSQSSLLLEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 TLHTYFPSFLSRATPSCPPEMKKELLSSLTECLTVDPLSASVWRQLYPKHLSQSSLLLEH 320 330 340 350 360 370 430 440 450 460 470 480 pF1KB5 LLSSWEQIPKKVQKSLQETIQSLKLTNQELLRKGSSNNQDVVTCDMACKGLLQQVQGPRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 LLSSWEQIPKKVQKSLQETIQSLKLTNQELLRKGSSNNQDVVTCDMACKGLLQQVQGPRL 380 390 400 410 420 430 490 500 510 520 530 540 pF1KB5 PWTRLLLLLLVFAVGFLCHDLRSHSSFQASLTGRLLRSSGFLPASQQACAKLYSYSLQGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 PWTRLLLLLLVFAVGFLCHDLRSHSSFQASLTGRLLRSSGFLPASQQACAKLYSYSLQGY 440 450 460 470 480 490 550 560 570 580 590 600 pF1KB5 SWLGETLPLWGSHLLTVVRPSLQLAWAHTNATVSFLSAHCASHLAWFGDSLTSLSQRLQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 SWLGETLPLWGSHLLTVVRPSLQLAWAHTNATVSFLSAHCASHLAWFGDSLTSLSQRLQI 500 510 520 530 540 550 610 620 630 640 650 660 pF1KB5 QLPDSVNQLLRYLRELPLLFHQNVLLPLWHLLLEALAWAQEHCHEACRGEVTWDCMKTQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 QLPDSVNQLLRYLRELPLLFHQNVLLPLWHLLLEALAWAQEHCHEACRGEVTWDCMKTQL 560 570 580 590 600 610 670 680 pF1KB5 SEAVHWTWLCLQDITVAFLDWALALISQQ ::::::::::::::::::::::::::::: CCDS46 SEAVHWTWLCLQDITVAFLDWALALISQQ 620 630 640 689 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 04:44:31 2016 done: Mon Nov 7 04:44:32 2016 Total Scan time: 3.270 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]