Result of FASTA (omim) for
pF1KB5834
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5834, 481 aa
1>>>pF1KB5834 481 - 481 aa - 481 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.9378+/-0.000313; mu= 6.8578+/- 0.020
mean_var=168.4242+/-34.841, 0's: 0 Z-trim(121.5): 50 B-trim: 297 in 1/56
Lambda= 0.098826
statistics sampled from 38256 (38308) to 38256 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.77), E-opt: 0.2 (0.449), width: 16
Scan time: 11.650
The best scores are: opt bits E(85289)
NP_001372 (OMIM: 602919) docking protein 1 isoform ( 481) 3323 485.6 1.3e-136
NP_001305796 (OMIM: 602919) docking protein 1 isof ( 470) 3181 465.4 1.6e-130
NP_001305795 (OMIM: 602919) docking protein 1 isof ( 342) 2367 349.2 1.1e-95
NP_001184189 (OMIM: 602919) docking protein 1 isof ( 342) 2367 349.2 1.1e-95
NP_001305798 (OMIM: 602919) docking protein 1 isof ( 267) 1867 277.8 2.5e-74
XP_016859017 (OMIM: 602919) PREDICTED: docking pro ( 267) 1867 277.8 2.5e-74
NP_001305797 (OMIM: 602919) docking protein 1 isof ( 177) 1048 160.9 2.6e-39
XP_011532958 (OMIM: 611435) PREDICTED: docking pro ( 440) 675 108.1 5.4e-23
NP_001295165 (OMIM: 611435) docking protein 3 isof ( 440) 675 108.1 5.4e-23
NP_001295164 (OMIM: 611435) docking protein 3 isof ( 440) 675 108.1 5.4e-23
XP_011532957 (OMIM: 611435) PREDICTED: docking pro ( 440) 675 108.1 5.4e-23
XP_011532956 (OMIM: 611435) PREDICTED: docking pro ( 440) 675 108.1 5.4e-23
XP_005266042 (OMIM: 611435) PREDICTED: docking pro ( 440) 675 108.1 5.4e-23
NP_079148 (OMIM: 611435) docking protein 3 isoform ( 496) 675 108.1 5.9e-23
NP_003965 (OMIM: 604997) docking protein 2 isoform ( 412) 590 95.9 2.3e-19
NP_001138347 (OMIM: 611435) docking protein 3 isof ( 330) 504 83.6 9.4e-16
XP_005266044 (OMIM: 611435) PREDICTED: docking pro ( 330) 504 83.6 9.4e-16
XP_011532959 (OMIM: 611435) PREDICTED: docking pro ( 338) 375 65.2 3.3e-10
XP_016865372 (OMIM: 611435) PREDICTED: docking pro ( 395) 375 65.2 3.7e-10
XP_005273737 (OMIM: 604997) PREDICTED: docking pro ( 318) 362 63.3 1.1e-09
NP_958728 (OMIM: 604997) docking protein 2 isoform ( 258) 335 59.4 1.4e-08
NP_001304729 (OMIM: 604997) docking protein 2 isof ( 258) 335 59.4 1.4e-08
XP_011527206 (OMIM: 608334) PREDICTED: docking pro ( 198) 226 43.8 0.00054
NP_808874 (OMIM: 608334) docking protein 5 isoform ( 198) 226 43.8 0.00054
NP_060901 (OMIM: 608334) docking protein 5 isoform ( 306) 226 43.9 0.00075
NP_060580 (OMIM: 608333) docking protein 4 isoform ( 326) 222 43.4 0.0012
XP_005256100 (OMIM: 608333) PREDICTED: docking pro ( 326) 222 43.4 0.0012
NP_001317485 (OMIM: 608333) docking protein 4 isof ( 365) 222 43.4 0.0013
XP_016865682 (OMIM: 607744) PREDICTED: fibroblast ( 455) 218 42.9 0.0023
XP_011512556 (OMIM: 607744) PREDICTED: fibroblast ( 492) 218 42.9 0.0024
NP_006644 (OMIM: 607744) fibroblast growth factor ( 492) 218 42.9 0.0024
XP_011512557 (OMIM: 607744) PREDICTED: fibroblast ( 492) 218 42.9 0.0024
XP_016881099 (OMIM: 611402) PREDICTED: docking pro ( 223) 208 41.3 0.0035
XP_016881100 (OMIM: 611402) PREDICTED: docking pro ( 223) 208 41.3 0.0035
XP_011524177 (OMIM: 611402) PREDICTED: docking pro ( 289) 208 41.3 0.0043
NP_689934 (OMIM: 611402) docking protein 6 [Homo s ( 331) 208 41.4 0.0047
NP_001138348 (OMIM: 611435) docking protein 3 isof ( 228) 202 40.4 0.0064
XP_016865373 (OMIM: 611435) PREDICTED: docking pro ( 285) 202 40.5 0.0076
>>NP_001372 (OMIM: 602919) docking protein 1 isoform a [ (481 aa)
initn: 3323 init1: 3323 opt: 3323 Z-score: 2573.7 bits: 485.6 E(85289): 1.3e-136
Smith-Waterman score: 3323; 100.0% identity (100.0% similar) in 481 aa overlap (1-481:1-481)
10 20 30 40 50 60
pF1KB5 MDGAVMEGPLFLQSQRFGTKRWRKTWAVLYPASPHGVARLEFFDHKGSSSGGGRGSSRRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDGAVMEGPLFLQSQRFGTKRWRKTWAVLYPASPHGVARLEFFDHKGSSSGGGRGSSRRL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 DCKVIRLAECVSVAPVTVETPPEPGATAFRLDTAQRSHLLAADAPSSAAWVQTLCRNAFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DCKVIRLAECVSVAPVTVETPPEPGATAFRLDTAQRSHLLAADAPSSAAWVQTLCRNAFP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 KGSWTLAPTDNPPKLSALEMLENSLYSPTWEGSQFWVTVQRTEAAERCGLHGSYVLRVEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGSWTLAPTDNPPKLSALEMLENSLYSPTWEGSQFWVTVQRTEAAERCGLHGSYVLRVEA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 ERLTLLTVGAQSQILEPLLSWPYTLLRRYGRDKVMFSFEAGRRCPSGPGTFTFQTAQGND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERLTLLTVGAQSQILEPLLSWPYTLLRRYGRDKVMFSFEAGRRCPSGPGTFTFQTAQGND
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 IFQAVETAIHRQKAQGKAGQGHDVLRADSHEGEVAEGKLPSPPGPQELLDSPPALYAEPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IFQAVETAIHRQKAQGKAGQGHDVLRADSHEGEVAEGKLPSPPGPQELLDSPPALYAEPL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 DSLRIAPCPSQDSLYSDPLDSTSAQAGEGVQRKKPLYWDLYEHAQQQLLKAKLTDPKEDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSLRIAPCPSQDSLYSDPLDSTSAQAGEGVQRKKPLYWDLYEHAQQQLLKAKLTDPKEDP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 IYDEPEGLAPVPPQGLYDLPREPKDAWWCQARVKEEGYELPYNPATDDYAVPPPRSTKPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IYDEPEGLAPVPPQGLYDLPREPKDAWWCQARVKEEGYELPYNPATDDYAVPPPRSTKPL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 LAPKPQGPAFPEPGTATGSGIKSHNSALYSQVQKSGASGSWDCGLSRVGTDKTGVKSEGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAPKPQGPAFPEPGTATGSGIKSHNSALYSQVQKSGASGSWDCGLSRVGTDKTGVKSEGS
430 440 450 460 470 480
pF1KB5 T
:
NP_001 T
>>NP_001305796 (OMIM: 602919) docking protein 1 isoform (470 aa)
initn: 3181 init1: 3181 opt: 3181 Z-score: 2464.4 bits: 465.4 E(85289): 1.6e-130
Smith-Waterman score: 3181; 100.0% identity (100.0% similar) in 460 aa overlap (22-481:11-470)
10 20 30 40 50 60
pF1KB5 MDGAVMEGPLFLQSQRFGTKRWRKTWAVLYPASPHGVARLEFFDHKGSSSGGGRGSSRRL
:::::::::::::::::::::::::::::::::::::::
NP_001 MPNLIRASSGWRKTWAVLYPASPHGVARLEFFDHKGSSSGGGRGSSRRL
10 20 30 40
70 80 90 100 110 120
pF1KB5 DCKVIRLAECVSVAPVTVETPPEPGATAFRLDTAQRSHLLAADAPSSAAWVQTLCRNAFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DCKVIRLAECVSVAPVTVETPPEPGATAFRLDTAQRSHLLAADAPSSAAWVQTLCRNAFP
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB5 KGSWTLAPTDNPPKLSALEMLENSLYSPTWEGSQFWVTVQRTEAAERCGLHGSYVLRVEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGSWTLAPTDNPPKLSALEMLENSLYSPTWEGSQFWVTVQRTEAAERCGLHGSYVLRVEA
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB5 ERLTLLTVGAQSQILEPLLSWPYTLLRRYGRDKVMFSFEAGRRCPSGPGTFTFQTAQGND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERLTLLTVGAQSQILEPLLSWPYTLLRRYGRDKVMFSFEAGRRCPSGPGTFTFQTAQGND
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB5 IFQAVETAIHRQKAQGKAGQGHDVLRADSHEGEVAEGKLPSPPGPQELLDSPPALYAEPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IFQAVETAIHRQKAQGKAGQGHDVLRADSHEGEVAEGKLPSPPGPQELLDSPPALYAEPL
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB5 DSLRIAPCPSQDSLYSDPLDSTSAQAGEGVQRKKPLYWDLYEHAQQQLLKAKLTDPKEDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSLRIAPCPSQDSLYSDPLDSTSAQAGEGVQRKKPLYWDLYEHAQQQLLKAKLTDPKEDP
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB5 IYDEPEGLAPVPPQGLYDLPREPKDAWWCQARVKEEGYELPYNPATDDYAVPPPRSTKPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IYDEPEGLAPVPPQGLYDLPREPKDAWWCQARVKEEGYELPYNPATDDYAVPPPRSTKPL
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB5 LAPKPQGPAFPEPGTATGSGIKSHNSALYSQVQKSGASGSWDCGLSRVGTDKTGVKSEGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAPKPQGPAFPEPGTATGSGIKSHNSALYSQVQKSGASGSWDCGLSRVGTDKTGVKSEGS
410 420 430 440 450 460
pF1KB5 T
:
NP_001 T
470
>>NP_001305795 (OMIM: 602919) docking protein 1 isoform (342 aa)
initn: 2367 init1: 2367 opt: 2367 Z-score: 1839.1 bits: 349.2 E(85289): 1.1e-95
Smith-Waterman score: 2367; 100.0% identity (100.0% similar) in 342 aa overlap (140-481:1-342)
110 120 130 140 150 160
pF1KB5 WVQTLCRNAFPKGSWTLAPTDNPPKLSALEMLENSLYSPTWEGSQFWVTVQRTEAAERCG
::::::::::::::::::::::::::::::
NP_001 MLENSLYSPTWEGSQFWVTVQRTEAAERCG
10 20 30
170 180 190 200 210 220
pF1KB5 LHGSYVLRVEAERLTLLTVGAQSQILEPLLSWPYTLLRRYGRDKVMFSFEAGRRCPSGPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LHGSYVLRVEAERLTLLTVGAQSQILEPLLSWPYTLLRRYGRDKVMFSFEAGRRCPSGPG
40 50 60 70 80 90
230 240 250 260 270 280
pF1KB5 TFTFQTAQGNDIFQAVETAIHRQKAQGKAGQGHDVLRADSHEGEVAEGKLPSPPGPQELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TFTFQTAQGNDIFQAVETAIHRQKAQGKAGQGHDVLRADSHEGEVAEGKLPSPPGPQELL
100 110 120 130 140 150
290 300 310 320 330 340
pF1KB5 DSPPALYAEPLDSLRIAPCPSQDSLYSDPLDSTSAQAGEGVQRKKPLYWDLYEHAQQQLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSPPALYAEPLDSLRIAPCPSQDSLYSDPLDSTSAQAGEGVQRKKPLYWDLYEHAQQQLL
160 170 180 190 200 210
350 360 370 380 390 400
pF1KB5 KAKLTDPKEDPIYDEPEGLAPVPPQGLYDLPREPKDAWWCQARVKEEGYELPYNPATDDY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KAKLTDPKEDPIYDEPEGLAPVPPQGLYDLPREPKDAWWCQARVKEEGYELPYNPATDDY
220 230 240 250 260 270
410 420 430 440 450 460
pF1KB5 AVPPPRSTKPLLAPKPQGPAFPEPGTATGSGIKSHNSALYSQVQKSGASGSWDCGLSRVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVPPPRSTKPLLAPKPQGPAFPEPGTATGSGIKSHNSALYSQVQKSGASGSWDCGLSRVG
280 290 300 310 320 330
470 480
pF1KB5 TDKTGVKSEGST
::::::::::::
NP_001 TDKTGVKSEGST
340
>>NP_001184189 (OMIM: 602919) docking protein 1 isoform (342 aa)
initn: 2367 init1: 2367 opt: 2367 Z-score: 1839.1 bits: 349.2 E(85289): 1.1e-95
Smith-Waterman score: 2367; 100.0% identity (100.0% similar) in 342 aa overlap (140-481:1-342)
110 120 130 140 150 160
pF1KB5 WVQTLCRNAFPKGSWTLAPTDNPPKLSALEMLENSLYSPTWEGSQFWVTVQRTEAAERCG
::::::::::::::::::::::::::::::
NP_001 MLENSLYSPTWEGSQFWVTVQRTEAAERCG
10 20 30
170 180 190 200 210 220
pF1KB5 LHGSYVLRVEAERLTLLTVGAQSQILEPLLSWPYTLLRRYGRDKVMFSFEAGRRCPSGPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LHGSYVLRVEAERLTLLTVGAQSQILEPLLSWPYTLLRRYGRDKVMFSFEAGRRCPSGPG
40 50 60 70 80 90
230 240 250 260 270 280
pF1KB5 TFTFQTAQGNDIFQAVETAIHRQKAQGKAGQGHDVLRADSHEGEVAEGKLPSPPGPQELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TFTFQTAQGNDIFQAVETAIHRQKAQGKAGQGHDVLRADSHEGEVAEGKLPSPPGPQELL
100 110 120 130 140 150
290 300 310 320 330 340
pF1KB5 DSPPALYAEPLDSLRIAPCPSQDSLYSDPLDSTSAQAGEGVQRKKPLYWDLYEHAQQQLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSPPALYAEPLDSLRIAPCPSQDSLYSDPLDSTSAQAGEGVQRKKPLYWDLYEHAQQQLL
160 170 180 190 200 210
350 360 370 380 390 400
pF1KB5 KAKLTDPKEDPIYDEPEGLAPVPPQGLYDLPREPKDAWWCQARVKEEGYELPYNPATDDY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KAKLTDPKEDPIYDEPEGLAPVPPQGLYDLPREPKDAWWCQARVKEEGYELPYNPATDDY
220 230 240 250 260 270
410 420 430 440 450 460
pF1KB5 AVPPPRSTKPLLAPKPQGPAFPEPGTATGSGIKSHNSALYSQVQKSGASGSWDCGLSRVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVPPPRSTKPLLAPKPQGPAFPEPGTATGSGIKSHNSALYSQVQKSGASGSWDCGLSRVG
280 290 300 310 320 330
470 480
pF1KB5 TDKTGVKSEGST
::::::::::::
NP_001 TDKTGVKSEGST
340
>>NP_001305798 (OMIM: 602919) docking protein 1 isoform (267 aa)
initn: 1867 init1: 1867 opt: 1867 Z-score: 1455.4 bits: 277.8 E(85289): 2.5e-74
Smith-Waterman score: 1867; 100.0% identity (100.0% similar) in 267 aa overlap (215-481:1-267)
190 200 210 220 230 240
pF1KB5 LLTVGAQSQILEPLLSWPYTLLRRYGRDKVMFSFEAGRRCPSGPGTFTFQTAQGNDIFQA
::::::::::::::::::::::::::::::
NP_001 MFSFEAGRRCPSGPGTFTFQTAQGNDIFQA
10 20 30
250 260 270 280 290 300
pF1KB5 VETAIHRQKAQGKAGQGHDVLRADSHEGEVAEGKLPSPPGPQELLDSPPALYAEPLDSLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VETAIHRQKAQGKAGQGHDVLRADSHEGEVAEGKLPSPPGPQELLDSPPALYAEPLDSLR
40 50 60 70 80 90
310 320 330 340 350 360
pF1KB5 IAPCPSQDSLYSDPLDSTSAQAGEGVQRKKPLYWDLYEHAQQQLLKAKLTDPKEDPIYDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IAPCPSQDSLYSDPLDSTSAQAGEGVQRKKPLYWDLYEHAQQQLLKAKLTDPKEDPIYDE
100 110 120 130 140 150
370 380 390 400 410 420
pF1KB5 PEGLAPVPPQGLYDLPREPKDAWWCQARVKEEGYELPYNPATDDYAVPPPRSTKPLLAPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PEGLAPVPPQGLYDLPREPKDAWWCQARVKEEGYELPYNPATDDYAVPPPRSTKPLLAPK
160 170 180 190 200 210
430 440 450 460 470 480
pF1KB5 PQGPAFPEPGTATGSGIKSHNSALYSQVQKSGASGSWDCGLSRVGTDKTGVKSEGST
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PQGPAFPEPGTATGSGIKSHNSALYSQVQKSGASGSWDCGLSRVGTDKTGVKSEGST
220 230 240 250 260
>>XP_016859017 (OMIM: 602919) PREDICTED: docking protein (267 aa)
initn: 1867 init1: 1867 opt: 1867 Z-score: 1455.4 bits: 277.8 E(85289): 2.5e-74
Smith-Waterman score: 1867; 100.0% identity (100.0% similar) in 267 aa overlap (215-481:1-267)
190 200 210 220 230 240
pF1KB5 LLTVGAQSQILEPLLSWPYTLLRRYGRDKVMFSFEAGRRCPSGPGTFTFQTAQGNDIFQA
::::::::::::::::::::::::::::::
XP_016 MFSFEAGRRCPSGPGTFTFQTAQGNDIFQA
10 20 30
250 260 270 280 290 300
pF1KB5 VETAIHRQKAQGKAGQGHDVLRADSHEGEVAEGKLPSPPGPQELLDSPPALYAEPLDSLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VETAIHRQKAQGKAGQGHDVLRADSHEGEVAEGKLPSPPGPQELLDSPPALYAEPLDSLR
40 50 60 70 80 90
310 320 330 340 350 360
pF1KB5 IAPCPSQDSLYSDPLDSTSAQAGEGVQRKKPLYWDLYEHAQQQLLKAKLTDPKEDPIYDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IAPCPSQDSLYSDPLDSTSAQAGEGVQRKKPLYWDLYEHAQQQLLKAKLTDPKEDPIYDE
100 110 120 130 140 150
370 380 390 400 410 420
pF1KB5 PEGLAPVPPQGLYDLPREPKDAWWCQARVKEEGYELPYNPATDDYAVPPPRSTKPLLAPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PEGLAPVPPQGLYDLPREPKDAWWCQARVKEEGYELPYNPATDDYAVPPPRSTKPLLAPK
160 170 180 190 200 210
430 440 450 460 470 480
pF1KB5 PQGPAFPEPGTATGSGIKSHNSALYSQVQKSGASGSWDCGLSRVGTDKTGVKSEGST
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PQGPAFPEPGTATGSGIKSHNSALYSQVQKSGASGSWDCGLSRVGTDKTGVKSEGST
220 230 240 250 260
>>NP_001305797 (OMIM: 602919) docking protein 1 isoform (177 aa)
initn: 1048 init1: 1048 opt: 1048 Z-score: 826.8 bits: 160.9 E(85289): 2.6e-39
Smith-Waterman score: 1048; 100.0% identity (100.0% similar) in 152 aa overlap (1-152:1-152)
10 20 30 40 50 60
pF1KB5 MDGAVMEGPLFLQSQRFGTKRWRKTWAVLYPASPHGVARLEFFDHKGSSSGGGRGSSRRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDGAVMEGPLFLQSQRFGTKRWRKTWAVLYPASPHGVARLEFFDHKGSSSGGGRGSSRRL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 DCKVIRLAECVSVAPVTVETPPEPGATAFRLDTAQRSHLLAADAPSSAAWVQTLCRNAFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DCKVIRLAECVSVAPVTVETPPEPGATAFRLDTAQRSHLLAADAPSSAAWVQTLCRNAFP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 KGSWTLAPTDNPPKLSALEMLENSLYSPTWEGSQFWVTVQRTEAAERCGLHGSYVLRVEA
::::::::::::::::::::::::::::::::
NP_001 KGSWTLAPTDNPPKLSALEMLENSLYSPTWEGHVLFRGRPPLPLRPWNLHLPDGTGK
130 140 150 160 170
190 200 210 220 230 240
pF1KB5 ERLTLLTVGAQSQILEPLLSWPYTLLRRYGRDKVMFSFEAGRRCPSGPGTFTFQTAQGND
>>XP_011532958 (OMIM: 611435) PREDICTED: docking protein (440 aa)
initn: 574 init1: 214 opt: 675 Z-score: 533.8 bits: 108.1 E(85289): 5.4e-23
Smith-Waterman score: 675; 37.8% identity (59.3% similar) in 386 aa overlap (1-375:4-379)
10 20 30 40 50
pF1KB5 MDGAVMEGPLFLQSQRFGTKRWRKTWAVLYPASPHGVARLEFFDHK--GSSSGGGR-
.. . .: :. : .:: : :::.::.:: ..: :::::: .. . : ...: :
XP_011 MDPLETPIKDGILYQQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDRS
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 -GSSRRLDCKVIRLAECVSVAPVTVETPPEPGATAFRLDTAQRSHLLAADAPSSAAWVQT
: .:: . .:::::.:::: :. :. :. . :: : :..:::::::. ::.
XP_011 AGPGRRGERRVIRLADCVSVLPADGESCPRD-TGAFLLTTTERSHLLAAQ--HRQAWMGP
70 80 90 100 110
120 130 140 150 160 170
pF1KB5 LCRNAFP-KGSWTLAPTD-NPPKLSALEMLENSLYSPTWEGSQFWVTVQRTEAAERCGLH
.:. ::: : . . :: . :: . . : :::.:: : ..: :.::::::: :: :.
XP_011 ICQLAFPGTGEASSGSTDAQSPKRGLVPMEENSIYSSWQEVGEFPVVVQRTEAATRCQLK
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 GSYVLRVEAERLTLLTVGAQSQILEPLLSWPYTLLRRYGRDKVMFSFEAGRRCPSGPGTF
: .: . . . : ... . : :::: .::..: :: .::::::::: :: : :
XP_011 GPALLVLGPDAIQL----REAKGTQALYSWPYHFLRKFGSDKGVFSFEAGRRCHSGEGLF
180 190 200 210 220 230
240 250 260 270 280
pF1KB5 TFQTAQGNDIFQAVETAIHRQKAQGKA---GQGHDVLRADSHEGEVAEGKL-PSPPGPQE
.:.: . :. .:: :: ::. . : . :: : . . :.: ::::.
XP_011 AFSTPCAPDLCRAVAGAIARQRERLPELTRPQPCPLPRATSLPSLDTPGELREMPPGPEP
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB5 LLDSPPALYAEPL-DSLRIAPCPSQDSLYSDPLDSTSAQAGEGVQRKKPLYWDLYEHAQQ
. : ::: .:: . : ..: : :. .:. : .. :: .: .
XP_011 PTSRKMHL-AEPGPQSLPLLLGPEPNDLASGLYASVCKRAS-GPPGNEHLYENLCVLEAS
300 310 320 330 340 350
350 360 370 380 390 400
pF1KB5 QLLKAKLTDPKEDPIYDEPEGLAPVPPQGLYDLPREPKDAWWCQARVKEEGYELPYNPAT
:.. .:.: : : .:. .:
XP_011 PTLHGGEPEPHEGPGSRSPT-TSPIYHNGQDLSWPGPANDSTLEAQYRRLLELDQVEGTG
360 370 380 390 400 410
>>NP_001295165 (OMIM: 611435) docking protein 3 isoform (440 aa)
initn: 574 init1: 214 opt: 675 Z-score: 533.8 bits: 108.1 E(85289): 5.4e-23
Smith-Waterman score: 675; 37.8% identity (59.3% similar) in 386 aa overlap (1-375:4-379)
10 20 30 40 50
pF1KB5 MDGAVMEGPLFLQSQRFGTKRWRKTWAVLYPASPHGVARLEFFDHK--GSSSGGGR-
.. . .: :. : .:: : :::.::.:: ..: :::::: .. . : ...: :
NP_001 MDPLETPIKDGILYQQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDRS
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 -GSSRRLDCKVIRLAECVSVAPVTVETPPEPGATAFRLDTAQRSHLLAADAPSSAAWVQT
: .:: . .:::::.:::: :. :. :. . :: : :..:::::::. ::.
NP_001 AGPGRRGERRVIRLADCVSVLPADGESCPRD-TGAFLLTTTERSHLLAAQ--HRQAWMGP
70 80 90 100 110
120 130 140 150 160 170
pF1KB5 LCRNAFP-KGSWTLAPTD-NPPKLSALEMLENSLYSPTWEGSQFWVTVQRTEAAERCGLH
.:. ::: : . . :: . :: . . : :::.:: : ..: :.::::::: :: :.
NP_001 ICQLAFPGTGEASSGSTDAQSPKRGLVPMEENSIYSSWQEVGEFPVVVQRTEAATRCQLK
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 GSYVLRVEAERLTLLTVGAQSQILEPLLSWPYTLLRRYGRDKVMFSFEAGRRCPSGPGTF
: .: . . . : ... . : :::: .::..: :: .::::::::: :: : :
NP_001 GPALLVLGPDAIQL----REAKGTQALYSWPYHFLRKFGSDKGVFSFEAGRRCHSGEGLF
180 190 200 210 220 230
240 250 260 270 280
pF1KB5 TFQTAQGNDIFQAVETAIHRQKAQGKA---GQGHDVLRADSHEGEVAEGKL-PSPPGPQE
.:.: . :. .:: :: ::. . : . :: : . . :.: ::::.
NP_001 AFSTPCAPDLCRAVAGAIARQRERLPELTRPQPCPLPRATSLPSLDTPGELREMPPGPEP
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB5 LLDSPPALYAEPL-DSLRIAPCPSQDSLYSDPLDSTSAQAGEGVQRKKPLYWDLYEHAQQ
. : ::: .:: . : ..: : :. .:. : .. :: .: .
NP_001 PTSRKMHL-AEPGPQSLPLLLGPEPNDLASGLYASVCKRAS-GPPGNEHLYENLCVLEAS
300 310 320 330 340 350
350 360 370 380 390 400
pF1KB5 QLLKAKLTDPKEDPIYDEPEGLAPVPPQGLYDLPREPKDAWWCQARVKEEGYELPYNPAT
:.. .:.: : : .:. .:
NP_001 PTLHGGEPEPHEGPGSRSPT-TSPIYHNGQDLSWPGPANDSTLEAQYRRLLELDQVEGTG
360 370 380 390 400 410
>>NP_001295164 (OMIM: 611435) docking protein 3 isoform (440 aa)
initn: 574 init1: 214 opt: 675 Z-score: 533.8 bits: 108.1 E(85289): 5.4e-23
Smith-Waterman score: 675; 37.8% identity (59.3% similar) in 386 aa overlap (1-375:4-379)
10 20 30 40 50
pF1KB5 MDGAVMEGPLFLQSQRFGTKRWRKTWAVLYPASPHGVARLEFFDHK--GSSSGGGR-
.. . .: :. : .:: : :::.::.:: ..: :::::: .. . : ...: :
NP_001 MDPLETPIKDGILYQQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDRS
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 -GSSRRLDCKVIRLAECVSVAPVTVETPPEPGATAFRLDTAQRSHLLAADAPSSAAWVQT
: .:: . .:::::.:::: :. :. :. . :: : :..:::::::. ::.
NP_001 AGPGRRGERRVIRLADCVSVLPADGESCPRD-TGAFLLTTTERSHLLAAQ--HRQAWMGP
70 80 90 100 110
120 130 140 150 160 170
pF1KB5 LCRNAFP-KGSWTLAPTD-NPPKLSALEMLENSLYSPTWEGSQFWVTVQRTEAAERCGLH
.:. ::: : . . :: . :: . . : :::.:: : ..: :.::::::: :: :.
NP_001 ICQLAFPGTGEASSGSTDAQSPKRGLVPMEENSIYSSWQEVGEFPVVVQRTEAATRCQLK
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 GSYVLRVEAERLTLLTVGAQSQILEPLLSWPYTLLRRYGRDKVMFSFEAGRRCPSGPGTF
: .: . . . : ... . : :::: .::..: :: .::::::::: :: : :
NP_001 GPALLVLGPDAIQL----REAKGTQALYSWPYHFLRKFGSDKGVFSFEAGRRCHSGEGLF
180 190 200 210 220 230
240 250 260 270 280
pF1KB5 TFQTAQGNDIFQAVETAIHRQKAQGKA---GQGHDVLRADSHEGEVAEGKL-PSPPGPQE
.:.: . :. .:: :: ::. . : . :: : . . :.: ::::.
NP_001 AFSTPCAPDLCRAVAGAIARQRERLPELTRPQPCPLPRATSLPSLDTPGELREMPPGPEP
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB5 LLDSPPALYAEPL-DSLRIAPCPSQDSLYSDPLDSTSAQAGEGVQRKKPLYWDLYEHAQQ
. : ::: .:: . : ..: : :. .:. : .. :: .: .
NP_001 PTSRKMHL-AEPGPQSLPLLLGPEPNDLASGLYASVCKRAS-GPPGNEHLYENLCVLEAS
300 310 320 330 340 350
350 360 370 380 390 400
pF1KB5 QLLKAKLTDPKEDPIYDEPEGLAPVPPQGLYDLPREPKDAWWCQARVKEEGYELPYNPAT
:.. .:.: : : .:. .:
NP_001 PTLHGGEPEPHEGPGSRSPT-TSPIYHNGQDLSWPGPANDSTLEAQYRRLLELDQVEGTG
360 370 380 390 400 410
481 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 23:20:04 2016 done: Sat Nov 5 23:20:06 2016
Total Scan time: 11.650 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]