Result of FASTA (omim) for
pF1KB5861
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5861, 461 aa
1>>>pF1KB5861 461 - 461 aa - 461 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.7062+/-0.000439; mu= -2.0167+/- 0.027
mean_var=293.2947+/-59.047, 0's: 0 Z-trim(120.5): 34 B-trim: 443 in 1/54
Lambda= 0.074890
statistics sampled from 35714 (35751) to 35714 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.741), E-opt: 0.2 (0.419), width: 16
Scan time: 9.530
The best scores are: opt bits E(85289)
NP_006175 (OMIM: 601323) nucleobindin-1 precursor ( 461) 3036 341.6 2.7e-93
XP_016882334 (OMIM: 601323) PREDICTED: nucleobindi ( 461) 3036 341.6 2.7e-93
XP_016873304 (OMIM: 608020) PREDICTED: nucleobindi ( 420) 1637 190.4 8e-48
XP_016873295 (OMIM: 608020) PREDICTED: nucleobindi ( 420) 1637 190.4 8e-48
XP_016873301 (OMIM: 608020) PREDICTED: nucleobindi ( 420) 1637 190.4 8e-48
XP_016873296 (OMIM: 608020) PREDICTED: nucleobindi ( 420) 1637 190.4 8e-48
XP_016873300 (OMIM: 608020) PREDICTED: nucleobindi ( 420) 1637 190.4 8e-48
XP_016873298 (OMIM: 608020) PREDICTED: nucleobindi ( 420) 1637 190.4 8e-48
XP_016873303 (OMIM: 608020) PREDICTED: nucleobindi ( 420) 1637 190.4 8e-48
NP_005004 (OMIM: 608020) nucleobindin-2 isoform 1 ( 420) 1637 190.4 8e-48
XP_016873308 (OMIM: 608020) PREDICTED: nucleobindi ( 420) 1637 190.4 8e-48
XP_016873306 (OMIM: 608020) PREDICTED: nucleobindi ( 420) 1637 190.4 8e-48
XP_016873307 (OMIM: 608020) PREDICTED: nucleobindi ( 420) 1637 190.4 8e-48
XP_016873297 (OMIM: 608020) PREDICTED: nucleobindi ( 420) 1637 190.4 8e-48
XP_016873302 (OMIM: 608020) PREDICTED: nucleobindi ( 420) 1637 190.4 8e-48
XP_016873305 (OMIM: 608020) PREDICTED: nucleobindi ( 420) 1637 190.4 8e-48
XP_016873299 (OMIM: 608020) PREDICTED: nucleobindi ( 420) 1637 190.4 8e-48
XP_016873294 (OMIM: 608020) PREDICTED: nucleobindi ( 421) 1637 190.4 8e-48
XP_016873293 (OMIM: 608020) PREDICTED: nucleobindi ( 421) 1637 190.4 8e-48
NP_001317156 (OMIM: 608020) nucleobindin-2 isoform ( 390) 1333 157.5 5.8e-38
XP_016873316 (OMIM: 608020) PREDICTED: nucleobindi ( 390) 1333 157.5 5.8e-38
XP_016873313 (OMIM: 608020) PREDICTED: nucleobindi ( 390) 1333 157.5 5.8e-38
XP_016873318 (OMIM: 608020) PREDICTED: nucleobindi ( 390) 1333 157.5 5.8e-38
XP_016873317 (OMIM: 608020) PREDICTED: nucleobindi ( 390) 1333 157.5 5.8e-38
XP_016873315 (OMIM: 608020) PREDICTED: nucleobindi ( 390) 1333 157.5 5.8e-38
XP_016873314 (OMIM: 608020) PREDICTED: nucleobindi ( 390) 1333 157.5 5.8e-38
XP_016873312 (OMIM: 608020) PREDICTED: nucleobindi ( 390) 1333 157.5 5.8e-38
XP_016873310 (OMIM: 608020) PREDICTED: nucleobindi ( 391) 1333 157.5 5.8e-38
XP_016873309 (OMIM: 608020) PREDICTED: nucleobindi ( 391) 1333 157.5 5.8e-38
>>NP_006175 (OMIM: 601323) nucleobindin-1 precursor [Hom (461 aa)
initn: 3036 init1: 3036 opt: 3036 Z-score: 1796.0 bits: 341.6 E(85289): 2.7e-93
Smith-Waterman score: 3036; 100.0% identity (100.0% similar) in 461 aa overlap (1-461:1-461)
10 20 30 40 50 60
pF1KB5 MPPSGPRGTLLLLPLLLLLLLRAVLAVPLERGAPNKEETPATESPDTGLYYHRYLQEVID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MPPSGPRGTLLLLPLLLLLLLRAVLAVPLERGAPNKEETPATESPDTGLYYHRYLQEVID
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 VLETDGHFREKLQAANAEDIKSGKLSRELDFVSHHVRTKLDELKRQEVSRLRMLLKAKMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 VLETDGHFREKLQAANAEDIKSGKLSRELDFVSHHVRTKLDELKRQEVSRLRMLLKAKMD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 AEQDPNVQVDHLNLLKQFEHLDPQNQHTFEARDLELLIQTATRDLAQYDAAHHEEFKRYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 AEQDPNVQVDHLNLLKQFEHLDPQNQHTFEARDLELLIQTATRDLAQYDAAHHEEFKRYE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 MLKEHERRRYLESLGEEQRKEAERKLEEQQRRHREHPKVNVPGSQAQLKEVWEELDGLDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MLKEHERRRYLESLGEEQRKEAERKLEEQQRRHREHPKVNVPGSQAQLKEVWEELDGLDP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 NRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 NRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 MKNVDTNQDRLVTLEEFLASTQRKEFGDTGEGWETVEMHPAYTEEELRRFEEELAAREAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MKNVDTNQDRLVTLEEFLASTQRKEFGDTGEGWETVEMHPAYTEEELRRFEEELAAREAE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 LNAKAQRLSQETEALGRSQGRLEAQKRELQQAVLHMEQRKQQQQQQQGHKAPAAHPEGQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LNAKAQRLSQETEALGRSQGRLEAQKRELQQAVLHMEQRKQQQQQQQGHKAPAAHPEGQL
370 380 390 400 410 420
430 440 450 460
pF1KB5 KFHPDTDDVPVPAPAGDQKEVDTSEKKLLERLPEVEVPQHL
:::::::::::::::::::::::::::::::::::::::::
NP_006 KFHPDTDDVPVPAPAGDQKEVDTSEKKLLERLPEVEVPQHL
430 440 450 460
>>XP_016882334 (OMIM: 601323) PREDICTED: nucleobindin-1 (461 aa)
initn: 3036 init1: 3036 opt: 3036 Z-score: 1796.0 bits: 341.6 E(85289): 2.7e-93
Smith-Waterman score: 3036; 100.0% identity (100.0% similar) in 461 aa overlap (1-461:1-461)
10 20 30 40 50 60
pF1KB5 MPPSGPRGTLLLLPLLLLLLLRAVLAVPLERGAPNKEETPATESPDTGLYYHRYLQEVID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MPPSGPRGTLLLLPLLLLLLLRAVLAVPLERGAPNKEETPATESPDTGLYYHRYLQEVID
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 VLETDGHFREKLQAANAEDIKSGKLSRELDFVSHHVRTKLDELKRQEVSRLRMLLKAKMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLETDGHFREKLQAANAEDIKSGKLSRELDFVSHHVRTKLDELKRQEVSRLRMLLKAKMD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 AEQDPNVQVDHLNLLKQFEHLDPQNQHTFEARDLELLIQTATRDLAQYDAAHHEEFKRYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AEQDPNVQVDHLNLLKQFEHLDPQNQHTFEARDLELLIQTATRDLAQYDAAHHEEFKRYE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 MLKEHERRRYLESLGEEQRKEAERKLEEQQRRHREHPKVNVPGSQAQLKEVWEELDGLDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLKEHERRRYLESLGEEQRKEAERKLEEQQRRHREHPKVNVPGSQAQLKEVWEELDGLDP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 NRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 MKNVDTNQDRLVTLEEFLASTQRKEFGDTGEGWETVEMHPAYTEEELRRFEEELAAREAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MKNVDTNQDRLVTLEEFLASTQRKEFGDTGEGWETVEMHPAYTEEELRRFEEELAAREAE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 LNAKAQRLSQETEALGRSQGRLEAQKRELQQAVLHMEQRKQQQQQQQGHKAPAAHPEGQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LNAKAQRLSQETEALGRSQGRLEAQKRELQQAVLHMEQRKQQQQQQQGHKAPAAHPEGQL
370 380 390 400 410 420
430 440 450 460
pF1KB5 KFHPDTDDVPVPAPAGDQKEVDTSEKKLLERLPEVEVPQHL
:::::::::::::::::::::::::::::::::::::::::
XP_016 KFHPDTDDVPVPAPAGDQKEVDTSEKKLLERLPEVEVPQHL
430 440 450 460
>>XP_016873304 (OMIM: 608020) PREDICTED: nucleobindin-2 (420 aa)
initn: 1210 init1: 985 opt: 1637 Z-score: 979.6 bits: 190.4 E(85289): 8e-48
Smith-Waterman score: 1637; 61.4% identity (81.9% similar) in 415 aa overlap (15-424:13-418)
10 20 30 40 50
pF1KB5 MPPSGPRGTLLLLPLLLLLLLRAVLAVPLERGAPNKE-----ETPATESPDTGLYYHRYL
::. :: :. :::.. . . :. : ::::::: .::
XP_016 MRWRTILLQYCFLLITCLLTALEAVPIDIDKTKVQNIHPVESAKIEPPDTGLYYDEYL
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 QEVIDVLETDGHFREKLQAANAEDIKSGKLSRELDFVSHHVRTKLDELKRQEVSRLRMLL
..:::::::: ::::::: :. :.::::.::.:::.:::::::::::::::::.:::::.
XP_016 KQVIDVLETDKHFREKLQKADIEEIKSGRLSKELDLVSHHVRTKLDELKRQEVGRLRMLI
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 KAKMDAEQDPNVQVDHLNLLKQFEHLDPQNQHTFEARDLELLIQTATRDLAQYDAAHHEE
:::.:. :: . .:: :::::.::. : ::. ::..::..:: :: .:: ..:::
XP_016 KAKLDSLQD--IGMDHQALLKQFDHLNHLNPDKFESTDLDMLIKAATSDLEHYDKTRHEE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 FKRYEMLKEHERRRYLESLGEEQRKEAERKLEEQQRRHREHPKVNVPGSQAQLKEVWEEL
::.:::.::::::.::..:.::.::: : :.::....:..::::: :::. ::::::::
XP_016 FKKYEMMKEHERREYLKTLNEEKRKEEESKFEEMKKKHENHPKVNHPGSKDQLKEVWEET
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 DGLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLR
:::::: :.::::: :::.:::: ::::::::::::::::::::::::::: ::::::::
XP_016 DGLDPNDFDPKTFFKLHDVNSDGFLDEQELEALFTKELEKVYDPKNEEDDMVEMEEERLR
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 MREHVMKNVDTNQDRLVTLEEFLASTQRKEFGDTGEGWETVEMHPAYTEEELRRFEEELA
::::::..::::.:::::::::: .:..::: . ..:::.... .:::::...:. .:
XP_016 MREHVMNEVDTNKDRLVTLEEFLKATEKKEFLEP-DSWETLDQQQFFTEEELKEYENIIA
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB5 AREAELNAKAQRLSQETEALGRSQGRLEAQKRELQQAVLHMEQRKQQQQQQQGHKAPAAH
.: ::. ::..:... : : :.. .::::: : .:.. .:::.: :: : .
XP_016 LQENELKKKADELQKQKEELQRQHDQLEAQKLEYHQVIQQMEQKKLQQG------IPPSG
360 370 380 390 400
420 430 440 450 460
pF1KB5 PEGQLKFHPDTDDVPVPAPAGDQKEVDTSEKKLLERLPEVEVPQHL
: :.:::.:
XP_016 PAGELKFEPHI
410 420
>>XP_016873295 (OMIM: 608020) PREDICTED: nucleobindin-2 (420 aa)
initn: 1210 init1: 985 opt: 1637 Z-score: 979.6 bits: 190.4 E(85289): 8e-48
Smith-Waterman score: 1637; 61.4% identity (81.9% similar) in 415 aa overlap (15-424:13-418)
10 20 30 40 50
pF1KB5 MPPSGPRGTLLLLPLLLLLLLRAVLAVPLERGAPNKE-----ETPATESPDTGLYYHRYL
::. :: :. :::.. . . :. : ::::::: .::
XP_016 MRWRTILLQYCFLLITCLLTALEAVPIDIDKTKVQNIHPVESAKIEPPDTGLYYDEYL
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 QEVIDVLETDGHFREKLQAANAEDIKSGKLSRELDFVSHHVRTKLDELKRQEVSRLRMLL
..:::::::: ::::::: :. :.::::.::.:::.:::::::::::::::::.:::::.
XP_016 KQVIDVLETDKHFREKLQKADIEEIKSGRLSKELDLVSHHVRTKLDELKRQEVGRLRMLI
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 KAKMDAEQDPNVQVDHLNLLKQFEHLDPQNQHTFEARDLELLIQTATRDLAQYDAAHHEE
:::.:. :: . .:: :::::.::. : ::. ::..::..:: :: .:: ..:::
XP_016 KAKLDSLQD--IGMDHQALLKQFDHLNHLNPDKFESTDLDMLIKAATSDLEHYDKTRHEE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 FKRYEMLKEHERRRYLESLGEEQRKEAERKLEEQQRRHREHPKVNVPGSQAQLKEVWEEL
::.:::.::::::.::..:.::.::: : :.::....:..::::: :::. ::::::::
XP_016 FKKYEMMKEHERREYLKTLNEEKRKEEESKFEEMKKKHENHPKVNHPGSKDQLKEVWEET
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 DGLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLR
:::::: :.::::: :::.:::: ::::::::::::::::::::::::::: ::::::::
XP_016 DGLDPNDFDPKTFFKLHDVNSDGFLDEQELEALFTKELEKVYDPKNEEDDMVEMEEERLR
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 MREHVMKNVDTNQDRLVTLEEFLASTQRKEFGDTGEGWETVEMHPAYTEEELRRFEEELA
::::::..::::.:::::::::: .:..::: . ..:::.... .:::::...:. .:
XP_016 MREHVMNEVDTNKDRLVTLEEFLKATEKKEFLEP-DSWETLDQQQFFTEEELKEYENIIA
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB5 AREAELNAKAQRLSQETEALGRSQGRLEAQKRELQQAVLHMEQRKQQQQQQQGHKAPAAH
.: ::. ::..:... : : :.. .::::: : .:.. .:::.: :: : .
XP_016 LQENELKKKADELQKQKEELQRQHDQLEAQKLEYHQVIQQMEQKKLQQG------IPPSG
360 370 380 390 400
420 430 440 450 460
pF1KB5 PEGQLKFHPDTDDVPVPAPAGDQKEVDTSEKKLLERLPEVEVPQHL
: :.:::.:
XP_016 PAGELKFEPHI
410 420
>>XP_016873301 (OMIM: 608020) PREDICTED: nucleobindin-2 (420 aa)
initn: 1210 init1: 985 opt: 1637 Z-score: 979.6 bits: 190.4 E(85289): 8e-48
Smith-Waterman score: 1637; 61.4% identity (81.9% similar) in 415 aa overlap (15-424:13-418)
10 20 30 40 50
pF1KB5 MPPSGPRGTLLLLPLLLLLLLRAVLAVPLERGAPNKE-----ETPATESPDTGLYYHRYL
::. :: :. :::.. . . :. : ::::::: .::
XP_016 MRWRTILLQYCFLLITCLLTALEAVPIDIDKTKVQNIHPVESAKIEPPDTGLYYDEYL
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 QEVIDVLETDGHFREKLQAANAEDIKSGKLSRELDFVSHHVRTKLDELKRQEVSRLRMLL
..:::::::: ::::::: :. :.::::.::.:::.:::::::::::::::::.:::::.
XP_016 KQVIDVLETDKHFREKLQKADIEEIKSGRLSKELDLVSHHVRTKLDELKRQEVGRLRMLI
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 KAKMDAEQDPNVQVDHLNLLKQFEHLDPQNQHTFEARDLELLIQTATRDLAQYDAAHHEE
:::.:. :: . .:: :::::.::. : ::. ::..::..:: :: .:: ..:::
XP_016 KAKLDSLQD--IGMDHQALLKQFDHLNHLNPDKFESTDLDMLIKAATSDLEHYDKTRHEE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 FKRYEMLKEHERRRYLESLGEEQRKEAERKLEEQQRRHREHPKVNVPGSQAQLKEVWEEL
::.:::.::::::.::..:.::.::: : :.::....:..::::: :::. ::::::::
XP_016 FKKYEMMKEHERREYLKTLNEEKRKEEESKFEEMKKKHENHPKVNHPGSKDQLKEVWEET
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 DGLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLR
:::::: :.::::: :::.:::: ::::::::::::::::::::::::::: ::::::::
XP_016 DGLDPNDFDPKTFFKLHDVNSDGFLDEQELEALFTKELEKVYDPKNEEDDMVEMEEERLR
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 MREHVMKNVDTNQDRLVTLEEFLASTQRKEFGDTGEGWETVEMHPAYTEEELRRFEEELA
::::::..::::.:::::::::: .:..::: . ..:::.... .:::::...:. .:
XP_016 MREHVMNEVDTNKDRLVTLEEFLKATEKKEFLEP-DSWETLDQQQFFTEEELKEYENIIA
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB5 AREAELNAKAQRLSQETEALGRSQGRLEAQKRELQQAVLHMEQRKQQQQQQQGHKAPAAH
.: ::. ::..:... : : :.. .::::: : .:.. .:::.: :: : .
XP_016 LQENELKKKADELQKQKEELQRQHDQLEAQKLEYHQVIQQMEQKKLQQG------IPPSG
360 370 380 390 400
420 430 440 450 460
pF1KB5 PEGQLKFHPDTDDVPVPAPAGDQKEVDTSEKKLLERLPEVEVPQHL
: :.:::.:
XP_016 PAGELKFEPHI
410 420
>>XP_016873296 (OMIM: 608020) PREDICTED: nucleobindin-2 (420 aa)
initn: 1210 init1: 985 opt: 1637 Z-score: 979.6 bits: 190.4 E(85289): 8e-48
Smith-Waterman score: 1637; 61.4% identity (81.9% similar) in 415 aa overlap (15-424:13-418)
10 20 30 40 50
pF1KB5 MPPSGPRGTLLLLPLLLLLLLRAVLAVPLERGAPNKE-----ETPATESPDTGLYYHRYL
::. :: :. :::.. . . :. : ::::::: .::
XP_016 MRWRTILLQYCFLLITCLLTALEAVPIDIDKTKVQNIHPVESAKIEPPDTGLYYDEYL
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 QEVIDVLETDGHFREKLQAANAEDIKSGKLSRELDFVSHHVRTKLDELKRQEVSRLRMLL
..:::::::: ::::::: :. :.::::.::.:::.:::::::::::::::::.:::::.
XP_016 KQVIDVLETDKHFREKLQKADIEEIKSGRLSKELDLVSHHVRTKLDELKRQEVGRLRMLI
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 KAKMDAEQDPNVQVDHLNLLKQFEHLDPQNQHTFEARDLELLIQTATRDLAQYDAAHHEE
:::.:. :: . .:: :::::.::. : ::. ::..::..:: :: .:: ..:::
XP_016 KAKLDSLQD--IGMDHQALLKQFDHLNHLNPDKFESTDLDMLIKAATSDLEHYDKTRHEE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 FKRYEMLKEHERRRYLESLGEEQRKEAERKLEEQQRRHREHPKVNVPGSQAQLKEVWEEL
::.:::.::::::.::..:.::.::: : :.::....:..::::: :::. ::::::::
XP_016 FKKYEMMKEHERREYLKTLNEEKRKEEESKFEEMKKKHENHPKVNHPGSKDQLKEVWEET
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 DGLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLR
:::::: :.::::: :::.:::: ::::::::::::::::::::::::::: ::::::::
XP_016 DGLDPNDFDPKTFFKLHDVNSDGFLDEQELEALFTKELEKVYDPKNEEDDMVEMEEERLR
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 MREHVMKNVDTNQDRLVTLEEFLASTQRKEFGDTGEGWETVEMHPAYTEEELRRFEEELA
::::::..::::.:::::::::: .:..::: . ..:::.... .:::::...:. .:
XP_016 MREHVMNEVDTNKDRLVTLEEFLKATEKKEFLEP-DSWETLDQQQFFTEEELKEYENIIA
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB5 AREAELNAKAQRLSQETEALGRSQGRLEAQKRELQQAVLHMEQRKQQQQQQQGHKAPAAH
.: ::. ::..:... : : :.. .::::: : .:.. .:::.: :: : .
XP_016 LQENELKKKADELQKQKEELQRQHDQLEAQKLEYHQVIQQMEQKKLQQG------IPPSG
360 370 380 390 400
420 430 440 450 460
pF1KB5 PEGQLKFHPDTDDVPVPAPAGDQKEVDTSEKKLLERLPEVEVPQHL
: :.:::.:
XP_016 PAGELKFEPHI
410 420
>>XP_016873300 (OMIM: 608020) PREDICTED: nucleobindin-2 (420 aa)
initn: 1210 init1: 985 opt: 1637 Z-score: 979.6 bits: 190.4 E(85289): 8e-48
Smith-Waterman score: 1637; 61.4% identity (81.9% similar) in 415 aa overlap (15-424:13-418)
10 20 30 40 50
pF1KB5 MPPSGPRGTLLLLPLLLLLLLRAVLAVPLERGAPNKE-----ETPATESPDTGLYYHRYL
::. :: :. :::.. . . :. : ::::::: .::
XP_016 MRWRTILLQYCFLLITCLLTALEAVPIDIDKTKVQNIHPVESAKIEPPDTGLYYDEYL
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 QEVIDVLETDGHFREKLQAANAEDIKSGKLSRELDFVSHHVRTKLDELKRQEVSRLRMLL
..:::::::: ::::::: :. :.::::.::.:::.:::::::::::::::::.:::::.
XP_016 KQVIDVLETDKHFREKLQKADIEEIKSGRLSKELDLVSHHVRTKLDELKRQEVGRLRMLI
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 KAKMDAEQDPNVQVDHLNLLKQFEHLDPQNQHTFEARDLELLIQTATRDLAQYDAAHHEE
:::.:. :: . .:: :::::.::. : ::. ::..::..:: :: .:: ..:::
XP_016 KAKLDSLQD--IGMDHQALLKQFDHLNHLNPDKFESTDLDMLIKAATSDLEHYDKTRHEE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 FKRYEMLKEHERRRYLESLGEEQRKEAERKLEEQQRRHREHPKVNVPGSQAQLKEVWEEL
::.:::.::::::.::..:.::.::: : :.::....:..::::: :::. ::::::::
XP_016 FKKYEMMKEHERREYLKTLNEEKRKEEESKFEEMKKKHENHPKVNHPGSKDQLKEVWEET
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 DGLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLR
:::::: :.::::: :::.:::: ::::::::::::::::::::::::::: ::::::::
XP_016 DGLDPNDFDPKTFFKLHDVNSDGFLDEQELEALFTKELEKVYDPKNEEDDMVEMEEERLR
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 MREHVMKNVDTNQDRLVTLEEFLASTQRKEFGDTGEGWETVEMHPAYTEEELRRFEEELA
::::::..::::.:::::::::: .:..::: . ..:::.... .:::::...:. .:
XP_016 MREHVMNEVDTNKDRLVTLEEFLKATEKKEFLEP-DSWETLDQQQFFTEEELKEYENIIA
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB5 AREAELNAKAQRLSQETEALGRSQGRLEAQKRELQQAVLHMEQRKQQQQQQQGHKAPAAH
.: ::. ::..:... : : :.. .::::: : .:.. .:::.: :: : .
XP_016 LQENELKKKADELQKQKEELQRQHDQLEAQKLEYHQVIQQMEQKKLQQG------IPPSG
360 370 380 390 400
420 430 440 450 460
pF1KB5 PEGQLKFHPDTDDVPVPAPAGDQKEVDTSEKKLLERLPEVEVPQHL
: :.:::.:
XP_016 PAGELKFEPHI
410 420
>>XP_016873298 (OMIM: 608020) PREDICTED: nucleobindin-2 (420 aa)
initn: 1210 init1: 985 opt: 1637 Z-score: 979.6 bits: 190.4 E(85289): 8e-48
Smith-Waterman score: 1637; 61.4% identity (81.9% similar) in 415 aa overlap (15-424:13-418)
10 20 30 40 50
pF1KB5 MPPSGPRGTLLLLPLLLLLLLRAVLAVPLERGAPNKE-----ETPATESPDTGLYYHRYL
::. :: :. :::.. . . :. : ::::::: .::
XP_016 MRWRTILLQYCFLLITCLLTALEAVPIDIDKTKVQNIHPVESAKIEPPDTGLYYDEYL
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 QEVIDVLETDGHFREKLQAANAEDIKSGKLSRELDFVSHHVRTKLDELKRQEVSRLRMLL
..:::::::: ::::::: :. :.::::.::.:::.:::::::::::::::::.:::::.
XP_016 KQVIDVLETDKHFREKLQKADIEEIKSGRLSKELDLVSHHVRTKLDELKRQEVGRLRMLI
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 KAKMDAEQDPNVQVDHLNLLKQFEHLDPQNQHTFEARDLELLIQTATRDLAQYDAAHHEE
:::.:. :: . .:: :::::.::. : ::. ::..::..:: :: .:: ..:::
XP_016 KAKLDSLQD--IGMDHQALLKQFDHLNHLNPDKFESTDLDMLIKAATSDLEHYDKTRHEE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 FKRYEMLKEHERRRYLESLGEEQRKEAERKLEEQQRRHREHPKVNVPGSQAQLKEVWEEL
::.:::.::::::.::..:.::.::: : :.::....:..::::: :::. ::::::::
XP_016 FKKYEMMKEHERREYLKTLNEEKRKEEESKFEEMKKKHENHPKVNHPGSKDQLKEVWEET
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 DGLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLR
:::::: :.::::: :::.:::: ::::::::::::::::::::::::::: ::::::::
XP_016 DGLDPNDFDPKTFFKLHDVNSDGFLDEQELEALFTKELEKVYDPKNEEDDMVEMEEERLR
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 MREHVMKNVDTNQDRLVTLEEFLASTQRKEFGDTGEGWETVEMHPAYTEEELRRFEEELA
::::::..::::.:::::::::: .:..::: . ..:::.... .:::::...:. .:
XP_016 MREHVMNEVDTNKDRLVTLEEFLKATEKKEFLEP-DSWETLDQQQFFTEEELKEYENIIA
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB5 AREAELNAKAQRLSQETEALGRSQGRLEAQKRELQQAVLHMEQRKQQQQQQQGHKAPAAH
.: ::. ::..:... : : :.. .::::: : .:.. .:::.: :: : .
XP_016 LQENELKKKADELQKQKEELQRQHDQLEAQKLEYHQVIQQMEQKKLQQG------IPPSG
360 370 380 390 400
420 430 440 450 460
pF1KB5 PEGQLKFHPDTDDVPVPAPAGDQKEVDTSEKKLLERLPEVEVPQHL
: :.:::.:
XP_016 PAGELKFEPHI
410 420
>>XP_016873303 (OMIM: 608020) PREDICTED: nucleobindin-2 (420 aa)
initn: 1210 init1: 985 opt: 1637 Z-score: 979.6 bits: 190.4 E(85289): 8e-48
Smith-Waterman score: 1637; 61.4% identity (81.9% similar) in 415 aa overlap (15-424:13-418)
10 20 30 40 50
pF1KB5 MPPSGPRGTLLLLPLLLLLLLRAVLAVPLERGAPNKE-----ETPATESPDTGLYYHRYL
::. :: :. :::.. . . :. : ::::::: .::
XP_016 MRWRTILLQYCFLLITCLLTALEAVPIDIDKTKVQNIHPVESAKIEPPDTGLYYDEYL
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 QEVIDVLETDGHFREKLQAANAEDIKSGKLSRELDFVSHHVRTKLDELKRQEVSRLRMLL
..:::::::: ::::::: :. :.::::.::.:::.:::::::::::::::::.:::::.
XP_016 KQVIDVLETDKHFREKLQKADIEEIKSGRLSKELDLVSHHVRTKLDELKRQEVGRLRMLI
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 KAKMDAEQDPNVQVDHLNLLKQFEHLDPQNQHTFEARDLELLIQTATRDLAQYDAAHHEE
:::.:. :: . .:: :::::.::. : ::. ::..::..:: :: .:: ..:::
XP_016 KAKLDSLQD--IGMDHQALLKQFDHLNHLNPDKFESTDLDMLIKAATSDLEHYDKTRHEE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 FKRYEMLKEHERRRYLESLGEEQRKEAERKLEEQQRRHREHPKVNVPGSQAQLKEVWEEL
::.:::.::::::.::..:.::.::: : :.::....:..::::: :::. ::::::::
XP_016 FKKYEMMKEHERREYLKTLNEEKRKEEESKFEEMKKKHENHPKVNHPGSKDQLKEVWEET
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 DGLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLR
:::::: :.::::: :::.:::: ::::::::::::::::::::::::::: ::::::::
XP_016 DGLDPNDFDPKTFFKLHDVNSDGFLDEQELEALFTKELEKVYDPKNEEDDMVEMEEERLR
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 MREHVMKNVDTNQDRLVTLEEFLASTQRKEFGDTGEGWETVEMHPAYTEEELRRFEEELA
::::::..::::.:::::::::: .:..::: . ..:::.... .:::::...:. .:
XP_016 MREHVMNEVDTNKDRLVTLEEFLKATEKKEFLEP-DSWETLDQQQFFTEEELKEYENIIA
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB5 AREAELNAKAQRLSQETEALGRSQGRLEAQKRELQQAVLHMEQRKQQQQQQQGHKAPAAH
.: ::. ::..:... : : :.. .::::: : .:.. .:::.: :: : .
XP_016 LQENELKKKADELQKQKEELQRQHDQLEAQKLEYHQVIQQMEQKKLQQG------IPPSG
360 370 380 390 400
420 430 440 450 460
pF1KB5 PEGQLKFHPDTDDVPVPAPAGDQKEVDTSEKKLLERLPEVEVPQHL
: :.:::.:
XP_016 PAGELKFEPHI
410 420
>>NP_005004 (OMIM: 608020) nucleobindin-2 isoform 1 prec (420 aa)
initn: 1210 init1: 985 opt: 1637 Z-score: 979.6 bits: 190.4 E(85289): 8e-48
Smith-Waterman score: 1637; 61.4% identity (81.9% similar) in 415 aa overlap (15-424:13-418)
10 20 30 40 50
pF1KB5 MPPSGPRGTLLLLPLLLLLLLRAVLAVPLERGAPNKE-----ETPATESPDTGLYYHRYL
::. :: :. :::.. . . :. : ::::::: .::
NP_005 MRWRTILLQYCFLLITCLLTALEAVPIDIDKTKVQNIHPVESAKIEPPDTGLYYDEYL
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 QEVIDVLETDGHFREKLQAANAEDIKSGKLSRELDFVSHHVRTKLDELKRQEVSRLRMLL
..:::::::: ::::::: :. :.::::.::.:::.:::::::::::::::::.:::::.
NP_005 KQVIDVLETDKHFREKLQKADIEEIKSGRLSKELDLVSHHVRTKLDELKRQEVGRLRMLI
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 KAKMDAEQDPNVQVDHLNLLKQFEHLDPQNQHTFEARDLELLIQTATRDLAQYDAAHHEE
:::.:. :: . .:: :::::.::. : ::. ::..::..:: :: .:: ..:::
NP_005 KAKLDSLQD--IGMDHQALLKQFDHLNHLNPDKFESTDLDMLIKAATSDLEHYDKTRHEE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 FKRYEMLKEHERRRYLESLGEEQRKEAERKLEEQQRRHREHPKVNVPGSQAQLKEVWEEL
::.:::.::::::.::..:.::.::: : :.::....:..::::: :::. ::::::::
NP_005 FKKYEMMKEHERREYLKTLNEEKRKEEESKFEEMKKKHENHPKVNHPGSKDQLKEVWEET
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 DGLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLR
:::::: :.::::: :::.:::: ::::::::::::::::::::::::::: ::::::::
NP_005 DGLDPNDFDPKTFFKLHDVNSDGFLDEQELEALFTKELEKVYDPKNEEDDMVEMEEERLR
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 MREHVMKNVDTNQDRLVTLEEFLASTQRKEFGDTGEGWETVEMHPAYTEEELRRFEEELA
::::::..::::.:::::::::: .:..::: . ..:::.... .:::::...:. .:
NP_005 MREHVMNEVDTNKDRLVTLEEFLKATEKKEFLEP-DSWETLDQQQFFTEEELKEYENIIA
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB5 AREAELNAKAQRLSQETEALGRSQGRLEAQKRELQQAVLHMEQRKQQQQQQQGHKAPAAH
.: ::. ::..:... : : :.. .::::: : .:.. .:::.: :: : .
NP_005 LQENELKKKADELQKQKEELQRQHDQLEAQKLEYHQVIQQMEQKKLQQG------IPPSG
360 370 380 390 400
420 430 440 450 460
pF1KB5 PEGQLKFHPDTDDVPVPAPAGDQKEVDTSEKKLLERLPEVEVPQHL
: :.:::.:
NP_005 PAGELKFEPHI
410 420
461 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 15:22:15 2016 done: Sat Nov 5 15:22:17 2016
Total Scan time: 9.530 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]