FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB5878, 495 aa 1>>>pF1KB5878 495 - 495 aa - 495 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 12.7495+/-0.00154; mu= -11.8876+/- 0.092 mean_var=627.5926+/-131.911, 0's: 0 Z-trim(109.0): 149 B-trim: 0 in 0/54 Lambda= 0.051196 statistics sampled from 10489 (10580) to 10489 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.62), E-opt: 0.2 (0.325), width: 16 Scan time: 3.520 The best scores are: opt bits E(32554) CCDS10158.1 MNS1 gene_id:55329|Hs108|chr15 ( 495) 3125 246.2 6.1e-65 >>CCDS10158.1 MNS1 gene_id:55329|Hs108|chr15 (495 aa) initn: 3125 init1: 3125 opt: 3125 Z-score: 1279.3 bits: 246.2 E(32554): 6.1e-65 Smith-Waterman score: 3125; 99.8% identity (99.8% similar) in 495 aa overlap (1-495:1-495) 10 20 30 40 50 60 pF1KB5 MGSKRRNLSCSERHQKLVDENYCKKLHVQALKNVNSQIRNQMVQNENDNRVQRKQFLRLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MGSKRRNLSCSERHQKLVDENYCKKLHVQALKNVNSQIRNQMVQNENDNRVQRKQFLRLL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB5 QNEQFELDMEEAIQKAEENKRLKELQLKQEEKLAMELAKLKHESLKDEKMRQQVRENSIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 QNEQFELDMEEAIQKAEENKRLKELQLKQEEKLAMELAKLKHESLKDEKMRQQVRENSIE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB5 LRELEKKLKAAYMNKERAAQIAEKDAIKYEQMKRDAEIAKTMMEEHKRIIKEENAAEDKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 LRELEKKLKAAYMNKERAAQIAEKDAIKYEQMKRDAEIAKTMMEEHKRIIKEENAAEDKR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB5 NKAKAQYYLDLEKQLEEQEKKKQEAYEQLLKEKLMIDEIVRKIYEEDQLEKQQKLEKMNA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 NKAKAQYYLDLEKQLEEQEKKKQEAYEQLLKEKLMIDEIVRKIYEEDQLEKQQKLEKMNA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB5 MRRYIEEFQKEQALWRKKKREEMEEENRKIIEFANMQQQREEDRMAKVQENEEKRLQLQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MRRYIEEFQKEQALWRKKKREEMEEENRKIIEFANMQQQREEDRMAKVQENEEKRLQLQN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB5 ALTQKLEEMLRQREDLEQVRQELYQEEQAEIYKSKLKEEAEKKLRKQKEMKQDFEEQMAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 ALTQKLEEMLRQREDLEQVRQELYQEEQAEIYKSKLKEEAEKKLRKQKEMKQDFEEQMAL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB5 KELVLQAAKEEEENFRKTMLAKFAEDDRIELMNAQKQRMKQLEHRRAVEKLIEERRQQFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 KELVLQAAKEEEENFRKTMLAKFAEDDRIELMNAQKQRMKQLEHRRAVEKLIEERRQQFL 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB5 ADKQRGLEEWQLQQRRQGFINAIIEEERLKLLKEHATNLLGYLPKGVFKKEDDIDLLGEE ::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 ADKQRELEEWQLQQRRQGFINAIIEEERLKLLKEHATNLLGYLPKGVFKKEDDIDLLGEE 430 440 450 460 470 480 490 pF1KB5 FRKVYQQRSEICEEK ::::::::::::::: CCDS10 FRKVYQQRSEICEEK 490 495 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 08:21:00 2016 done: Sat Nov 5 08:21:01 2016 Total Scan time: 3.520 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]