Result of FASTA (omim) for
pF1KB5925
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5925, 504 aa
1>>>pF1KB5925 504 - 504 aa - 504 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.9237+/-0.000348; mu= -1.4764+/- 0.022
mean_var=302.6728+/-61.617, 0's: 0 Z-trim(123.9): 46 B-trim: 745 in 1/56
Lambda= 0.073720
statistics sampled from 44615 (44668) to 44615 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.81), E-opt: 0.2 (0.524), width: 16
Scan time: 11.420
The best scores are: opt bits E(85289)
XP_011514463 (OMIM: 607218,612245,612251) PREDICTE ( 504) 3577 393.7 6.4e-109
NP_116032 (OMIM: 607218,612245,612251) interferon ( 498) 3428 377.9 3.7e-104
NP_001092100 (OMIM: 607218,612245,612251) interfer ( 498) 3428 377.9 3.7e-104
NP_001092097 (OMIM: 607218,612245,612251) interfer ( 498) 3428 377.9 3.7e-104
XP_011514466 (OMIM: 607218,612245,612251) PREDICTE ( 488) 2332 261.3 4.5e-69
XP_011514465 (OMIM: 607218,612245,612251) PREDICTE ( 488) 2332 261.3 4.5e-69
XP_011514464 (OMIM: 607218,612245,612251) PREDICTE ( 488) 2332 261.3 4.5e-69
NP_001092099 (OMIM: 607218,612245,612251) interfer ( 514) 2299 257.8 5.4e-68
XP_011514462 (OMIM: 607218,612245,612251) PREDICTE ( 514) 2299 257.8 5.4e-68
XP_006716037 (OMIM: 607218,612245,612251) PREDICTE ( 514) 2299 257.8 5.4e-68
XP_011514460 (OMIM: 607218,612245,612251) PREDICTE ( 514) 2299 257.8 5.4e-68
XP_011514461 (OMIM: 607218,612245,612251) PREDICTE ( 514) 2299 257.8 5.4e-68
XP_005250374 (OMIM: 607218,612245,612251) PREDICTE ( 514) 2299 257.8 5.4e-68
NP_001229381 (OMIM: 607218,612245,612251) interfer ( 412) 1769 201.4 4.2e-51
NP_001193625 (OMIM: 119300,119500,607199,608864) i ( 372) 1016 121.2 5.1e-27
NP_006138 (OMIM: 119300,119500,607199,608864) inte ( 467) 597 76.8 1.6e-13
XP_005252966 (OMIM: 605047,616345) PREDICTED: inte ( 487) 588 75.8 3.1e-13
NP_004020 (OMIM: 605047,616345) interferon regulat ( 474) 587 75.7 3.3e-13
NP_002190 (OMIM: 147576) interferon regulatory fac ( 349) 398 55.5 2.9e-07
NP_001184053 (OMIM: 603734,616532) interferon regu ( 300) 388 54.4 5.5e-07
XP_016878688 (OMIM: 601565,614893,614894) PREDICTE ( 222) 384 53.8 5.9e-07
NP_001562 (OMIM: 603734,616532) interferon regulat ( 427) 388 54.5 7.1e-07
XP_016882256 (OMIM: 603734,616532) PREDICTED: inte ( 427) 388 54.5 7.1e-07
XP_016882255 (OMIM: 603734,616532) PREDICTED: inte ( 427) 388 54.5 7.1e-07
NP_001184051 (OMIM: 603734,616532) interferon regu ( 452) 388 54.5 7.4e-07
XP_006723260 (OMIM: 603734,616532) PREDICTED: inte ( 452) 388 54.5 7.4e-07
XP_006723261 (OMIM: 603734,616532) PREDICTED: inte ( 452) 388 54.5 7.4e-07
NP_002154 (OMIM: 601565,614893,614894) interferon ( 426) 387 54.4 7.7e-07
XP_006715153 (OMIM: 601900,611724) PREDICTED: inte ( 415) 384 54.1 9.4e-07
NP_002451 (OMIM: 601900,611724) interferon regulat ( 451) 384 54.1 1e-06
XP_011541680 (OMIM: 147575,211980,613659) PREDICTE ( 284) 377 53.2 1.2e-06
NP_002189 (OMIM: 147575,211980,613659) interferon ( 325) 377 53.2 1.3e-06
NP_001182215 (OMIM: 601900,611724) interferon regu ( 450) 380 53.7 1.3e-06
XP_011518368 (OMIM: 605047,616345) PREDICTED: inte ( 502) 381 53.8 1.3e-06
NP_001563 (OMIM: 605047,616345) interferon regulat ( 503) 381 53.8 1.3e-06
XP_005252964 (OMIM: 605047,616345) PREDICTED: inte ( 515) 381 53.8 1.4e-06
XP_005252963 (OMIM: 605047,616345) PREDICTED: inte ( 516) 381 53.8 1.4e-06
NP_004022 (OMIM: 605047,616345) interferon regulat ( 516) 381 53.8 1.4e-06
NP_006075 (OMIM: 147574) interferon regulatory fac ( 393) 369 52.5 2.7e-06
NP_001184054 (OMIM: 603734,616532) interferon regu ( 281) 336 48.8 2.4e-05
NP_001184055 (OMIM: 603734,616532) interferon regu ( 281) 336 48.8 2.4e-05
XP_016873163 (OMIM: 605047,616345) PREDICTED: inte ( 210) 330 48.1 3.1e-05
>>XP_011514463 (OMIM: 607218,612245,612251) PREDICTED: i (504 aa)
initn: 3577 init1: 3577 opt: 3577 Z-score: 2076.4 bits: 393.7 E(85289): 6.4e-109
Smith-Waterman score: 3577; 100.0% identity (100.0% similar) in 504 aa overlap (1-504:1-504)
10 20 30 40 50 60
pF1KB5 MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 WPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 DSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPV
430 440 450 460 470 480
490 500
pF1KB5 AQAPPGAGLGVGQGPWPMHPAGMQ
::::::::::::::::::::::::
XP_011 AQAPPGAGLGVGQGPWPMHPAGMQ
490 500
>>NP_116032 (OMIM: 607218,612245,612251) interferon regu (498 aa)
initn: 2279 init1: 2279 opt: 3428 Z-score: 1990.9 bits: 377.9 E(85289): 3.7e-104
Smith-Waterman score: 3428; 96.6% identity (97.4% similar) in 504 aa overlap (1-504:1-498)
10 20 30 40 50 60
pF1KB5 MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK
::::::::::::::::::::::::::::::::::::::::. :. : . : .:
NP_116 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTEDVKWPPTLQPPTLR-----
130 140 150 160 170
190 200 210 220 230 240
pF1KB5 WPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 -PPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQL
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB5 LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISL
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB5 EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB5 DSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 DSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLI
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB5 TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPV
420 430 440 450 460 470
490 500
pF1KB5 AQAPPGAGLGVGQGPWPMHPAGMQ
::::::::::::::::::::::::
NP_116 AQAPPGAGLGVGQGPWPMHPAGMQ
480 490
>>NP_001092100 (OMIM: 607218,612245,612251) interferon r (498 aa)
initn: 2279 init1: 2279 opt: 3428 Z-score: 1990.9 bits: 377.9 E(85289): 3.7e-104
Smith-Waterman score: 3428; 96.6% identity (97.4% similar) in 504 aa overlap (1-504:1-498)
10 20 30 40 50 60
pF1KB5 MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK
::::::::::::::::::::::::::::::::::::::::. :. : . : .:
NP_001 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTEDVKWPPTLQPPTLR-----
130 140 150 160 170
190 200 210 220 230 240
pF1KB5 WPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 -PPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQL
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB5 LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISL
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB5 EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB5 DSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLI
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB5 TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPV
420 430 440 450 460 470
490 500
pF1KB5 AQAPPGAGLGVGQGPWPMHPAGMQ
::::::::::::::::::::::::
NP_001 AQAPPGAGLGVGQGPWPMHPAGMQ
480 490
>>NP_001092097 (OMIM: 607218,612245,612251) interferon r (498 aa)
initn: 2279 init1: 2279 opt: 3428 Z-score: 1990.9 bits: 377.9 E(85289): 3.7e-104
Smith-Waterman score: 3428; 96.6% identity (97.4% similar) in 504 aa overlap (1-504:1-498)
10 20 30 40 50 60
pF1KB5 MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK
::::::::::::::::::::::::::::::::::::::::. :. : . : .:
NP_001 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTEDVKWPPTLQPPTLR-----
130 140 150 160 170
190 200 210 220 230 240
pF1KB5 WPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 -PPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQL
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB5 LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISL
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB5 EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB5 DSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLI
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB5 TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPV
420 430 440 450 460 470
490 500
pF1KB5 AQAPPGAGLGVGQGPWPMHPAGMQ
::::::::::::::::::::::::
NP_001 AQAPPGAGLGVGQGPWPMHPAGMQ
480 490
>>XP_011514466 (OMIM: 607218,612245,612251) PREDICTED: i (488 aa)
initn: 2323 init1: 2323 opt: 2332 Z-score: 1361.0 bits: 261.3 E(85289): 4.5e-69
Smith-Waterman score: 3426; 96.8% identity (96.8% similar) in 504 aa overlap (1-504:1-488)
10 20 30 40 50 60
pF1KB5 MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK
:::::::::::::::::::::::::::::::::::::::: ::::
XP_011 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLT----------------EDVK
130 140 150 160
190 200 210 220 230 240
pF1KB5 WPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQL
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB5 LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISL
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB5 EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB5 DSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLI
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB5 TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPV
410 420 430 440 450 460
490 500
pF1KB5 AQAPPGAGLGVGQGPWPMHPAGMQ
::::::::::::::::::::::::
XP_011 AQAPPGAGLGVGQGPWPMHPAGMQ
470 480
>>XP_011514465 (OMIM: 607218,612245,612251) PREDICTED: i (488 aa)
initn: 2323 init1: 2323 opt: 2332 Z-score: 1361.0 bits: 261.3 E(85289): 4.5e-69
Smith-Waterman score: 3426; 96.8% identity (96.8% similar) in 504 aa overlap (1-504:1-488)
10 20 30 40 50 60
pF1KB5 MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK
:::::::::::::::::::::::::::::::::::::::: ::::
XP_011 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLT----------------EDVK
130 140 150 160
190 200 210 220 230 240
pF1KB5 WPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQL
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB5 LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISL
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB5 EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB5 DSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLI
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB5 TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPV
410 420 430 440 450 460
490 500
pF1KB5 AQAPPGAGLGVGQGPWPMHPAGMQ
::::::::::::::::::::::::
XP_011 AQAPPGAGLGVGQGPWPMHPAGMQ
470 480
>>XP_011514464 (OMIM: 607218,612245,612251) PREDICTED: i (488 aa)
initn: 2323 init1: 2323 opt: 2332 Z-score: 1361.0 bits: 261.3 E(85289): 4.5e-69
Smith-Waterman score: 3426; 96.8% identity (96.8% similar) in 504 aa overlap (1-504:1-488)
10 20 30 40 50 60
pF1KB5 MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK
:::::::::::::::::::::::::::::::::::::::: ::::
XP_011 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLT----------------EDVK
130 140 150 160
190 200 210 220 230 240
pF1KB5 WPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQL
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB5 LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISL
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB5 EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB5 DSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLI
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB5 TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPV
410 420 430 440 450 460
490 500
pF1KB5 AQAPPGAGLGVGQGPWPMHPAGMQ
::::::::::::::::::::::::
XP_011 AQAPPGAGLGVGQGPWPMHPAGMQ
470 480
>>NP_001092099 (OMIM: 607218,612245,612251) interferon r (514 aa)
initn: 2279 init1: 2279 opt: 2299 Z-score: 1341.7 bits: 257.8 E(85289): 5.4e-68
Smith-Waterman score: 3547; 98.1% identity (98.1% similar) in 514 aa overlap (1-504:1-514)
10 20 30 40 50 60
pF1KB5 MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK
130 140 150 160 170 180
190 200 210 220 230
pF1KB5 WPPTLQPPTL----------QPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP
:::::::::: ::::::::::::::::::::::::::::::::::::::::
NP_001 WPPTLQPPTLRPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB5 ASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQE
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB5 QVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKV
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB5 FWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWP
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB5 DRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHI
430 440 450 460 470 480
480 490 500
pF1KB5 WQSQQRLQPVAQAPPGAGLGVGQGPWPMHPAGMQ
::::::::::::::::::::::::::::::::::
NP_001 WQSQQRLQPVAQAPPGAGLGVGQGPWPMHPAGMQ
490 500 510
>>XP_011514462 (OMIM: 607218,612245,612251) PREDICTED: i (514 aa)
initn: 2279 init1: 2279 opt: 2299 Z-score: 1341.7 bits: 257.8 E(85289): 5.4e-68
Smith-Waterman score: 3547; 98.1% identity (98.1% similar) in 514 aa overlap (1-504:1-514)
10 20 30 40 50 60
pF1KB5 MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK
130 140 150 160 170 180
190 200 210 220 230
pF1KB5 WPPTLQPPTL----------QPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP
:::::::::: ::::::::::::::::::::::::::::::::::::::::
XP_011 WPPTLQPPTLRPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB5 ASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQE
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB5 QVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKV
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB5 FWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWP
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB5 DRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHI
430 440 450 460 470 480
480 490 500
pF1KB5 WQSQQRLQPVAQAPPGAGLGVGQGPWPMHPAGMQ
::::::::::::::::::::::::::::::::::
XP_011 WQSQQRLQPVAQAPPGAGLGVGQGPWPMHPAGMQ
490 500 510
>>XP_006716037 (OMIM: 607218,612245,612251) PREDICTED: i (514 aa)
initn: 2279 init1: 2279 opt: 2299 Z-score: 1341.7 bits: 257.8 E(85289): 5.4e-68
Smith-Waterman score: 3547; 98.1% identity (98.1% similar) in 514 aa overlap (1-504:1-514)
10 20 30 40 50 60
pF1KB5 MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK
130 140 150 160 170 180
190 200 210 220 230
pF1KB5 WPPTLQPPTL----------QPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP
:::::::::: ::::::::::::::::::::::::::::::::::::::::
XP_006 WPPTLQPPTLRPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB5 ASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQE
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB5 QVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKV
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB5 FWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWP
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB5 DRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHI
430 440 450 460 470 480
480 490 500
pF1KB5 WQSQQRLQPVAQAPPGAGLGVGQGPWPMHPAGMQ
::::::::::::::::::::::::::::::::::
XP_006 WQSQQRLQPVAQAPPGAGLGVGQGPWPMHPAGMQ
490 500 510
504 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 10:42:11 2016 done: Sat Nov 5 10:42:12 2016
Total Scan time: 11.420 Total Display time: 0.090
Function used was FASTA [36.3.4 Apr, 2011]