Result of FASTA (ccds) for
pF1KB5939
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5939, 508 aa
1>>>pF1KB5939 508 - 508 aa - 508 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.2149+/-0.000917; mu= 13.8411+/- 0.056
mean_var=87.7611+/-17.152, 0's: 0 Z-trim(106.8): 41 B-trim: 0 in 0/52
Lambda= 0.136906
statistics sampled from 9166 (9206) to 9166 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.636), E-opt: 0.2 (0.283), width: 16
Scan time: 3.340
The best scores are: opt bits E(32554)
CCDS11787.1 P4HB gene_id:5034|Hs108|chr17 ( 508) 3358 673.5 1.5e-193
CCDS42089.1 PDIA2 gene_id:64714|Hs108|chr16 ( 525) 1571 320.6 2.8e-87
CCDS10584.1 PDILT gene_id:204474|Hs108|chr16 ( 584) 951 198.1 2.2e-50
CCDS5893.1 PDIA4 gene_id:9601|Hs108|chr7 ( 645) 907 189.4 1e-47
CCDS10101.1 PDIA3 gene_id:2923|Hs108|chr15 ( 505) 643 137.3 4e-32
CCDS8670.1 ERP27 gene_id:121506|Hs108|chr12 ( 273) 426 94.3 1.9e-19
CCDS35082.1 ERP44 gene_id:23071|Hs108|chr9 ( 406) 329 75.2 1.6e-13
CCDS32840.1 TMX3 gene_id:54495|Hs108|chr18 ( 454) 320 73.4 5.9e-13
>>CCDS11787.1 P4HB gene_id:5034|Hs108|chr17 (508 aa)
initn: 3358 init1: 3358 opt: 3358 Z-score: 3588.2 bits: 673.5 E(32554): 1.5e-193
Smith-Waterman score: 3358; 100.0% identity (100.0% similar) in 508 aa overlap (1-508:1-508)
10 20 30 40 50 60
pF1KB5 MLRRALLCLAVAALVRADAPEEEDHVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MLRRALLCLAVAALVRADAPEEEDHVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 PEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFRNGDTASPKEYTAGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 PEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFRNGDTASPKEYTAGR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 EADDIVNWLKKRTGPAATTLPDGAAAESLVESSEVAVIGFFKDVESDSAKQFLQAAEAID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 EADDIVNWLKKRTGPAATTLPDGAAAESLVESSEVAVIGFFKDVESDSAKQFLQAAEAID
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 DIPFGITSNSDVFSKYQLDKDGVVLFKKFDEGRNNFEGEVTKENLLDFIKHNQLPLVIEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DIPFGITSNSDVFSKYQLDKDGVVLFKKFDEGRNNFEGEVTKENLLDFIKHNQLPLVIEF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 TEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 ILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQEL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 PEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 PEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 VIAKMDSTANEVEAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESGGQDGAGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 VIAKMDSTANEVEAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESGGQDGAGD
430 440 450 460 470 480
490 500
pF1KB5 DDDLEDLEEAEEPDMEEDDDQKAVKDEL
::::::::::::::::::::::::::::
CCDS11 DDDLEDLEEAEEPDMEEDDDQKAVKDEL
490 500
>>CCDS42089.1 PDIA2 gene_id:64714|Hs108|chr16 (525 aa)
initn: 1561 init1: 752 opt: 1571 Z-score: 1680.5 bits: 320.6 E(32554): 2.8e-87
Smith-Waterman score: 1571; 50.0% identity (76.5% similar) in 468 aa overlap (18-474:32-495)
10 20 30 40
pF1KB5 MLRRALLCLAVAALVRADAPEEE----DHVLVLRKSNFAEALAAHKY
. :::: : .::: . ... :: :
CCDS42 SRQLLPVLLLLLLRASCPWGQEQGARSPSEEPPEEEIPKEDGILVLSRHTLGLALREHPA
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB5 LLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIK
:::::::::::::.::::::.:::. : ::. . :::::. . .::...:: :::.:
CCDS42 LLVEFYAPWCGHCQALAPEYSKAAAVLAAESMVVTLAKVDGPAQRELAEEFGVTEYPTLK
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB5 FFRNGDTASPKEYTAGREADDIVNWLKKRTGPAATTLPDGAAAESLVESSEVAVIGFFKD
:::::. . :.:::. :.:. :..::..:.::.: : : :::..:. . ...:::::.:
CCDS42 FFRNGNRTHPEEYTGPRDAEGIAEWLRRRVGPSAMRLEDEAAAQALIGGRDLVVIGFFQD
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB5 VESDSAKQFLQAAEAIDDIPFGITSNSDVFSKYQLDKDGVVLFKKFDEGRNNFEGEVTKE
...... :: :. :. ::.:. .:... : :: ::::::::::: .: : .:
CCDS42 LQDEDVATFLALAQDALDMTFGLTDRPRLFQQFGLTKDTVVLFKKFDEGRADFP--VDEE
190 200 210 220 230
230 240 250 260 270
pF1KB5 NLLD------FIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKT
:: :. ... :: ::. ::. :::...: .:.:::. .... . :..:
CCDS42 LGLDLGDLSRFLVTHSMRLVTEFNSQTSAKIFAARILNHLLLFVNQTLAAHRELLAGFGE
240 250 260 270 280 290
280 290 300 310 320 330
pF1KB5 AAESFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKP-ESEELTA
:: :.:..::. .: .::...:..:::: : :..::..:: :: : .. .::
CCDS42 AAPRFRGQVLFVVVDVA-ADNEHVLQYFGLKAEAAPTLRLVNLETT-KKYAPVDGGPVTA
300 310 320 330 340 350
340 350 360 370 380 390
pF1KB5 ERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPW
:: ::: :.:..::.:.:::.: :::..:::.:::::::.::::: :::::.:::::
CCDS42 ASITAFCHAVLNGQVKPYLLSQEIPPDWDQRPVKTLVGKNFEQVAFDETKNVFVKFYAPW
360 370 380 390 400 410
400 410 420 430 440 450
pF1KB5 CGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVEAVKVHSFPTLKFFPASADRTVID
: :::..:: :. :.: :.:::.:.::..:.::::..: ::.:::::.:::. : ::.
CCDS42 CTHCKEMAPAWEALAEKYQDHEDIIIAELDATANELDAFAVHGFPTLKYFPAGPGRKVIE
420 430 440 450 460 470
460 470 480 490 500
pF1KB5 YNGERTLDGFKKFLESGGQDGAGDDDDLEDLEEAEEPDMEEDDDQKAVKDEL
:.. : :. :.:::..::
CCDS42 YKSTRDLETFSKFLDNGGVLPTEEPPEEPAAPFPEPPANSTMGSKEEL
480 490 500 510 520
>>CCDS10584.1 PDILT gene_id:204474|Hs108|chr16 (584 aa)
initn: 864 init1: 389 opt: 951 Z-score: 1018.0 bits: 198.1 E(32554): 2.2e-50
Smith-Waterman score: 951; 32.6% identity (67.4% similar) in 485 aa overlap (22-504:41-523)
10 20 30 40 50
pF1KB5 MLRRALLCLAVAALVRADAPEEEDHVLVLRKSNFAEALAAHKYLLVEFYAP
:: .::: ..... : ..:.: :. :
CCDS10 VAACVSAVHSSPEVNAGVSSIHITKPVHILEERSLLVLTPAGLTQMLNQTRFLMVLFHNP
20 30 40 50 60 70
60 70 80 90 100 110
pF1KB5 WCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFRNGDTA
. . :: : .::. . . : ..::: : :..: :..:. : .:.: .:. .
CCDS10 SSKQSRNLAEELGKAVEIMGKGKNGIGFGKVDITIEKELQQEFGITKAPELKLFFEGNRS
80 90 100 110 120 130
120 130 140 150 160 170
pF1KB5 SPKEYTAGREADDIVNWLKKRTGPAATTLPDGAAAESLVESSEVAVIGFFKDVESDSAKQ
: . :. .: ::... . : . .. . .: : ....:::.:.: . :.
CCDS10 EPISCKGVVESAALVVWLRRQISQKAFLFNSSEQVAEFVISRPLVIVGFFQDLEEEVAEL
140 150 160 170 180 190
180 190 200 210 220
pF1KB5 FLQAAEAIDDIPFGITSNSDVFSKYQLDKDGVVLFKKFD-EGRNNFEGEVT-KENLLDFI
: .. . . .. ::. . ..:...... :.:..::: .:... .. : :..: :
CCDS10 FYDVIKDFPELTFGVITIGNVIGRFHVTLDSVLVFKKGKIVNRQKLINDSTNKQELNRVI
200 210 220 230 240 250
230 240 250 260 270 280
pF1KB5 KHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFI
:.. .:::.. .. : .: .:.:::. :: .: ....: :.. :..:::::
CCDS10 KQHLTDFVIEYNTENKDLISELHIMSHMLLFVSKSSESYGIIIQHYKLASKEFQNKILFI
260 270 280 290 300 310
290 300 310 320 330 340
pF1KB5 FIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEG
..:.:. : :....: . . . :.:....: . ..:: :...: : . .: . ::
CCDS10 LVDADEPRNGRVFKYFRVTEVDIPSVQILNLSSD-ARYKMPSDDITYESLKKFGRSFLSK
320 330 340 350 360
350 360 370 380 390 400
pF1KB5 KIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDK
. : :.:.:. ::. :: ::::::. :.::..:.::: ::::: .::.: :. ..
CCDS10 NATKHQSSEEIPKYWDQGLVKQLVGKNFNVVVFDKEKDVFVMFYAPWSKKCKMLFPLLEE
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB5 LGETYKDHENIVIAKMDSTANEVEAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKF
::. :..: .:.:::.: :::... . . .: ...::......:. :.::.:: ::. :
CCDS10 LGRKYQNHSTIIIAKIDVTANDIQLMYLDRYPFFRLFPSGSQQAVL-YKGEHTLKGFSDF
430 440 450 460 470 480
470 480 490 500
pF1KB5 LESGGQDGAGDDDDLEDLEEAEEPDMEEDDDQKAVKDEL
::: . :.:.: ..:. : . : ..: :
CCDS10 LESHIKTKIEDEDELLSVEQNEVIEEEVLAEEKEVPMMRKGLPEQQSPELENMTKYVSKL
490 500 510 520 530 540
CCDS10 EEPAGKKKTSEEVVVVVAKPKGPPVQKKKPKVKEEL
550 560 570 580
>>CCDS5893.1 PDIA4 gene_id:9601|Hs108|chr7 (645 aa)
initn: 718 init1: 333 opt: 907 Z-score: 970.3 bits: 189.4 E(32554): 1e-47
Smith-Waterman score: 907; 36.8% identity (65.4% similar) in 468 aa overlap (27-471:180-632)
10 20 30 40 50
pF1KB5 MLRRALLCLAVAALVRADAPEEEDHVLVLRKSNFAEALAAHKYLLVEFYAPWCGHC
::: : :: :.. .::::::::::::
CCDS58 DYEGSRTQEEIVAKVREVSQPDWTPPPEVTLVLTKENFDEVVNDADIILVEFYAPWCGHC
150 160 170 180 190 200
60 70 80 90 100 110
pF1KB5 KALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFRNGDTASPKEY
: ::::: ::: .:. .. : ::::::: :.:::... : ::::.:.::.: : .:
CCDS58 KKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLKIFRKG---RPYDY
210 220 230 240 250 260
120 130 140 150 160 170
pF1KB5 TAGREADDIVNWLKKRTGPAATT-LPDGAAAESLVESSEVAVIGFFKDVESDSA-KQFLQ
.. :: ::... ...:: . : . : : ....: .:: :: ::: : .:. .
CCDS58 NGPREKYGIVDYMIEQSGPPSKEILTLKQVQEFLKDGDDVIIIGVFKG-ESDPAYQQYQD
270 280 290 300 310 320
180 190 200 210 220
pF1KB5 AAEAI-DDIPFGITSNSDVFSKYQLDKDGVVLFK--KFD---EGRNNF---EGEVTKENL
::. . .: : : .... . .... .:... ::. : :... .: . .
CCDS58 AANNLREDYKFHHTFSTEIAKFLKVSQGQLVVMQPEKFQSKYEPRSHMMDVQGSTQDSAI
330 340 350 360 370 380
230 240 250 260 270 280
pF1KB5 LDFIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLS-NFKTAAESFKG
::. . :::: . . ... : . : : :. .: ....:.. ...
CCDS58 KDFVLKYALPLV-------GHRKVSNDAKRYTRR--PLVVVYYSVDFSFDYRAATQFWRS
390 400 410 420 430
290 300 310 320 330
pF1KB5 KIL--------FIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTA
:.: . : .:. : .. .::. : : :.: :. : ::. .
CCDS58 KVLEVAKDFPEYTFAIADEEDYAGEVKDLGLS-ESGEDVNAAILDESGKKFAMEPEEFDS
440 450 460 470 480 490
340 350 360 370 380 390
pF1KB5 ERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPW
. . :: : .::.:: . :: .:.. .: ::::.:::.:.....: ::.:..::::::
CCDS58 DTLREFVTAFKKGKLKPVIKSQPVPKN-NKGPVKVVVGKTFDSIVMDPKKDVLIEFYAPW
500 510 520 530 540 550
400 410 420 430 440 450
pF1KB5 CGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVEA--VKVHSFPTLKFFPASADRTV
::::::: :....:.. :: ....::::::.:::.: . ::..:::. : :.. ..
CCDS58 CGHCKQLEPVYNSLAKKYKGQKGLVIAKMDATANDVPSDRYKVEGFPTIYFAPSGDKKNP
560 570 580 590 600 610
460 470 480 490 500
pF1KB5 IDYNG-ERTLDGFKKFLESGGQDGAGDDDDLEDLEEAEEPDMEEDDDQKAVKDEL
. ..: .: :. ..::.:
CCDS58 VKFEGGDRDLEHLSKFIEEHATKLSRTKEEL
620 630 640
>--
initn: 300 init1: 300 opt: 328 Z-score: 352.3 bits: 75.1 E(32554): 2.7e-13
Smith-Waterman score: 328; 43.4% identity (70.5% similar) in 122 aa overlap (21-142:59-177)
10 20 30 40 50
pF1KB5 MLRRALLCLAVAALVRADAPEEEDHVLVLRKSNFAEALAAHKYLLVEFYA
.::. :::: .:: . .: . .:.::::
CCDS58 EDSSNRENAIEDEEEEEEEDDDEEEDDLEVKEENGVLVLNDANFDNFVADKDTVLLEFYA
30 40 50 60 70 80
60 70 80 90 100 110
pF1KB5 PWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFRNGDT
::::::: .:::: : :. :: . : .::.::: : ::... : ::::::....:..
CCDS58 PWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGYPTIKILKKGQA
90 100 110 120 130 140
120 130 140 150 160 170
pF1KB5 ASPKEYTAGREADDIVNWLKKRTGPAATTLPDGAAAESLVESSEVAVIGFFKDVESDSAK
. .: ..: ..:: ... . : : :.
CCDS58 V---DYEGSRTQEEIVAKVREVSQPDWTPPPEVTLVLTKENFDEVVNDADIILVEFYAPW
150 160 170 180 190 200
180 190 200 210 220 230
pF1KB5 QFLQAAEAIDDIPFGITSNSDVFSKYQLDKDGVVLFKKFDEGRNNFEGEVTKENLLDFIK
CCDS58 CGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLKIFRKGRPYD
210 220 230 240 250 260
>>CCDS10101.1 PDIA3 gene_id:2923|Hs108|chr15 (505 aa)
initn: 675 init1: 280 opt: 643 Z-score: 690.2 bits: 137.3 E(32554): 4e-32
Smith-Waterman score: 853; 34.7% identity (63.5% similar) in 498 aa overlap (2-471:3-481)
10 20 30 40 50
pF1KB5 MLRRALLCLAVAALVRADAPEEEDHVLVLRKSNFAEALA---AHKYLLVEFYAPWCGHC
::: : .:: :. : . :: : .:: .. . .::::.:::::::
CCDS10 MRLRRLALFPGVALLLAAARLAAASDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHC
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 KALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFRNGDTASPKEY
: ::::: :: .::. . ::::: : ... ..::: ::::.:.::.:. :. :
CCDS10 KRLAPEYEAAATRLKGI---VPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAG--AY
70 80 90 100 110
120 130 140 150 160 170
pF1KB5 TAGREADDIVNWLKKRTGPAATTLPDGAAAESLVESSEVAVIGFFKDVESDSAKQFLQAA
. : :: ::. :::..:::.. : .... .......::: : :.. ..::.::
CCDS10 DGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFISDKDASIVGFFDDSFSEAHSEFLKAA
120 130 140 150 160 170
180 190 200 210 220
pF1KB5 EAI-DDIPFGITSNSDVFSKYQLDKDGVVLFK------KFDEGRNNF-EGEVTKENLLDF
. :. :. :. .. ..:. . .:..::. ::.. . : ..:. .. :
CCDS10 SNLRDNYRFAHTNVESLVNEYDDNGEGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKF
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB5 IKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYD--GKLSNFKTAAESFKGKI
:..: . . ..::.. : : . ::. .: ::. .: ::. .....
CCDS10 IQENIFGICPHMTEDNKDLIQGKD-----LLIAYYDV-DYEKNAKGSNY------WRNRV
240 250 260 270 280
290 300 310 320 330
pF1KB5 LFI---FIDSDHTDNQRI---------LEFFGLKKE--ECPAVRLITLEEEMTKYKPESE
... :.:. : : . : :::.. : :.: . : . : .. :
CCDS10 MMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAKGEKFVMQEEFS
290 300 310 320 330 340
340 350 360 370 380 390
pF1KB5 ELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEF
. .. . .: . ...:..: .: :. .::. : ::::.:..::.... .:.:.:..::
CCDS10 R-DGKALERFLQDYFDGNLKRYLKSEPIPESNDG-PVKVVVAENFDEIVNNENKDVLIEF
350 360 370 380 390 400
400 410 420 430 440 450
pF1KB5 YAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVEA-VKVHSFPTLKFFPASAD
:::::::::.: : . .::: . ::::::::.:::.: . .:..:::. : ::.
CCDS10 YAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVPSPYEVRGFPTIYFSPANKK
410 420 430 440 450 460
460 470 480 490 500
pF1KB5 RTVIDYNGERTLDGFKKFLESGGQDGAGDDDDLEDLEEAEEPDMEEDDDQKAVKDEL
. :.: : :. : ..:.
CCDS10 LNPKKYEGGRELSDFISYLQREATNPPVIQEEKPKKKKKAQEDL
470 480 490 500
>>CCDS8670.1 ERP27 gene_id:121506|Hs108|chr12 (273 aa)
initn: 318 init1: 156 opt: 426 Z-score: 462.6 bits: 94.3 E(32554): 1.9e-19
Smith-Waterman score: 426; 32.5% identity (65.4% similar) in 231 aa overlap (130-351:29-257)
100 110 120 130 140 150
pF1KB5 PTIKFFRNGDTASPKEYTAGREADDIVNWLKKRTGPAATTLP----DGAAAESLVESSEV
:. ::.:. : : :: .. ..::
CCDS86 MEAAPSRFMFLLFLLTCELAAEVAAEVEKSSDGPGAAQEPTWLTDVPAAMEFIAATEV
10 20 30 40 50
160 170 180 190 200 210
pF1KB5 AVIGFFKDVESDSAKQFLQAAEAIDDIPFGITSNSDVFSKYQLDKDGVVLFKKFDEGRNN
::::::.:.: .. . . .. . . :::...:.:...:.. . . ::. :. . :
CCDS86 AVIGFFQDLEIPAVPILHSMVQKFPGVSFGISTDSEVLTHYNITGNTICLFRLVDNEQLN
60 70 80 90 100 110
220 230 240 250 260 270
pF1KB5 FEGE----VTKENLLDFIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGK
.: : . .: ::. :.: .: :.. :. .:.. :. :.::.. :. .:. .
CCDS86 LEDEDIESIDATKLSRFIEINSLHMVTEYNPVTVIGLFNSVIQIHLLLIMNKASPEYEEN
120 130 140 150 160 170
280 290 300 310 320 330
pF1KB5 LSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLI-TLEEEMTKYKPE
. .. ::. :.::::::..:: .: ... :: ::. . ::. . ::..: :
CCDS86 MHRYQKAAKLFQGKILFILVDSGMKENGKVISFFKLKESQLPALAIYQTLDDEWDTL-P-
180 190 200 210 220 230
340 350 360 370 380 390
pF1KB5 SEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDEKKNVFV
. :...:.. .:: :: ::.
CCDS86 TAEVSVEHVQNFCDGFLSGKLLKENRESEGKTPKVEL
240 250 260 270
>>CCDS35082.1 ERP44 gene_id:23071|Hs108|chr9 (406 aa)
initn: 190 init1: 122 opt: 329 Z-score: 356.4 bits: 75.2 E(32554): 1.6e-13
Smith-Waterman score: 340; 23.6% identity (54.9% similar) in 377 aa overlap (26-395:31-392)
10 20 30 40 50
pF1KB5 MLRRALLCLAVAALVRADAPEEEDHVLVLRKSNFAEALAAHKYLLVEFYAPWCGH
. : :. : : ::.::: ::
CCDS35 MHPAVFLSLPDLRCSLLLLVTWVFTPVTTEITSLDTENIDEILNNADVALVNFYADWCRF
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 CKALAPEYAKAAGKLKAE---GSEIRLAKVDATEESDLAQQYGVRGYPTIKFFRNGDTAS
. : : . .:. .: : ... .:.:: ..::.::.: . :::.:.::::
CCDS35 SQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKYPTLKLFRNG-MMM
70 80 90 100 110
120 130 140 150 160 170
pF1KB5 PKEYTAGREADDIVNWLKKRTGPAATTLPDGAAAESLVESSEVAVIGFFKDVESDSAKQF
.:: . : . ........ . . : : .: . :. .::.:.. .::. . :
CCDS35 KREYRGQRSVKALADYIRQQKSDPIQEIRDLAEITTL-DRSKRNIIGYFEQKDSDNYRVF
120 130 140 150 160 170
180 190 200 210 220
pF1KB5 LQAAEAI-DDIPFGITSNSDVFSKYQLDKDGVVLFKKFDEGRNN--FEGEVTKENLL-DF
..:. . :: : ... .:: . . . :... .: .. . . : .:. .. ..
CCDS35 ERVANILHDDCAF-LSAFGDVSKPERYSGDNII-YKPPGHSAPDMVYLGAMTNFDVTYNW
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB5 IKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILF
:. . .::: :.: ... .. . ::. . ... . . .. : :: : :
CCDS35 IQDKCVPLVREITFENGEELTEEGLPFLILFHMKEDTESLEIFQNEVARQLISEKGTINF
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB5 IFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLE
. : :. . : . .::.. . .... : . .. : .. .: .
CCDS35 LHADCDKFRHP--LLHIQKTPADCPVIAIDSFRH-MYVFGDFKDVLIPGKLKQFVFDLHS
300 310 320 330 340 350
350 360 370 380 390 400
pF1KB5 GKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWD
::. : .. :. : : :.. .::: . .. : .. ::
CCDS35 GKL--HREFHHGPDPTDTAP-----GEQAQDVASSPPESSFQKL-APSEYRYTLLRDRDE
360 370 380 390 400
410 420 430 440 450 460
pF1KB5 KLGETYKDHENIVIAKMDSTANEVEAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKK
CCDS35 L
>>CCDS32840.1 TMX3 gene_id:54495|Hs108|chr18 (454 aa)
initn: 288 init1: 249 opt: 320 Z-score: 346.1 bits: 73.4 E(32554): 5.9e-13
Smith-Waterman score: 320; 31.3% identity (63.6% similar) in 195 aa overlap (45-229:45-232)
20 30 40 50 60 70
pF1KB5 VRADAPEEEDHVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEG
::.:::::::::: : : . ... ..:. :
CCDS32 TVVVLDMVVCKGFVEDLDESFKENRNDDIWLVDFYAPWCGHCKKLEPIWNEVGLEMKSIG
20 30 40 50 60 70
80 90 100 110 120 130
pF1KB5 SEIRLAKVDATEESDLAQQYGVRGYPTIKFFRNGDTASPKEYTAGREADDIVNWLKKRTG
: ....:.::: :..:...:::::::::... :: : .: . : :::... .. .:
CCDS32 SPVKVGKMDATSYSSIASEFGVRGYPTIKLLK-GDLA--YNYRGPRTKDDIIEFAHRVSG
80 90 100 110 120 130
140 150 160 170 180 190
pF1KB5 PAATTLPDGAAAESLVESSEVAVIGFFKDV--ESDSAKQFLQAAEAIDDIPFGITSNSDV
::. : . . .: :: : :: .....:: . . .... .:
CCDS32 ALIRPLPSQQMFEHMQKRHRV----FFVYVGGESPLKEKYIDAASELIVYTYFFSASEEV
140 150 160 170 180
200 210 220 230 240
pF1KB5 FSKYQLDKD--GVVLFKK-----FDEGRN-NFEGEVTKENLLDFIKHNQLPLVIEFTEQT
.: :. .:..:: .:: .. .. . ...: . ...
CCDS32 VPEYVTLKEMPAVLVFKDETYFVYDEYEDGDLSSWINRERFQNYLAMDGFLLYELGDTGK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 APKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILEF
CCDS32 LVALAVIDEKNTSVEHTRLKSIIQEVARDYRDLFHRDFQFGHMDGNDYINTLLMDELTVP
250 260 270 280 290 300
508 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 15:38:24 2016 done: Sat Nov 5 15:38:25 2016
Total Scan time: 3.340 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]