Result of FASTA (omim) for
pF1KB5952
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5952, 547 aa
1>>>pF1KB5952 547 - 547 aa - 547 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8343+/-0.000413; mu= 16.5246+/- 0.025
mean_var=105.9487+/-21.138, 0's: 0 Z-trim(114.5): 108 B-trim: 615 in 1/54
Lambda= 0.124602
statistics sampled from 24231 (24352) to 24231 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.658), E-opt: 0.2 (0.286), width: 16
Scan time: 10.380
The best scores are: opt bits E(85289)
NP_002153 (OMIM: 146631) intercellular adhesion mo ( 547) 3657 668.6 1.3e-191
NP_001307535 (OMIM: 146631) intercellular adhesion ( 470) 3133 574.4 2.7e-163
NP_001307537 (OMIM: 146631) intercellular adhesion ( 286) 1882 349.3 9.4e-96
NP_001307534 (OMIM: 146631) intercellular adhesion ( 451) 1584 295.9 1.7e-79
NP_003250 (OMIM: 601852) intercellular adhesion mo ( 924) 1586 296.6 2.3e-79
XP_011526531 (OMIM: 601852) PREDICTED: intercellul ( 924) 1586 296.6 2.3e-79
NP_000192 (OMIM: 147840,611162) intercellular adhe ( 532) 1577 294.7 4.7e-79
XP_016882674 (OMIM: 601852) PREDICTED: intercellul ( 586) 516 104.0 1.3e-21
NP_001093258 (OMIM: 146630) intercellular adhesion ( 275) 419 86.3 1.3e-16
NP_001093256 (OMIM: 146630) intercellular adhesion ( 275) 419 86.3 1.3e-16
NP_001093259 (OMIM: 146630) intercellular adhesion ( 275) 419 86.3 1.3e-16
NP_001093257 (OMIM: 146630) intercellular adhesion ( 275) 419 86.3 1.3e-16
NP_000864 (OMIM: 146630) intercellular adhesion mo ( 275) 419 86.3 1.3e-16
NP_001535 (OMIM: 111250,614088) intercellular adhe ( 271) 255 56.8 1e-07
NP_001120645 (OMIM: 609743) cell adhesion molecule ( 398) 215 49.8 1.9e-05
NP_067012 (OMIM: 609743) cell adhesion molecule 3 ( 432) 215 49.8 2e-05
NP_001186763 (OMIM: 192225) vascular cell adhesion ( 677) 203 47.8 0.00013
NP_001069 (OMIM: 192225) vascular cell adhesion pr ( 739) 203 47.9 0.00013
NP_001034221 (OMIM: 111250,614088) intercellular a ( 272) 190 45.1 0.00033
>>NP_002153 (OMIM: 146631) intercellular adhesion molecu (547 aa)
initn: 3657 init1: 3657 opt: 3657 Z-score: 3560.8 bits: 668.6 E(85289): 1.3e-191
Smith-Waterman score: 3657; 100.0% identity (100.0% similar) in 547 aa overlap (1-547:1-547)
10 20 30 40 50 60
pF1KB5 MATMVPSVLWPRACWTLLVCCLLTPGVQGQEFLLRVEPQNPVLSAGGSLFVNCSTDCPSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MATMVPSVLWPRACWTLLVCCLLTPGVQGQEFLLRVEPQNPVLSAGGSLFVNCSTDCPSS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EKIALETSLSKELVASGMGWAAFNLSNVTGNSRILCSVYCNGSQITGSSNITVYRLPERV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 EKIALETSLSKELVASGMGWAAFNLSNVTGNSRILCSVYCNGSQITGSSNITVYRLPERV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 ELAPLPPWQPVGQNFTLRCQVEDGSPRTSLTVVLLRWEEELSRQPAVEEPAEVTATVLAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 ELAPLPPWQPVGQNFTLRCQVEDGSPRTSLTVVLLRWEEELSRQPAVEEPAEVTATVLAS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 RDDHGAPFSCRTELDMQPQGLGLFVNTSAPRQLRTFVLPVTPPRLVAPRFLEVETSWPVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 RDDHGAPFSCRTELDMQPQGLGLFVNTSAPRQLRTFVLPVTPPRLVAPRFLEVETSWPVD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 CTLDGLFPASEAQVYLALGDQMLNATVMNHGDTLTATATATARADQEGAREIVCNVTLGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 CTLDGLFPASEAQVYLALGDQMLNATVMNHGDTLTATATATARADQEGAREIVCNVTLGG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 ERREARENLTVFSFLGPIVNLSEPTAHEGSTVTVSCMAGARVQVTLDGVPAAAPGQPAQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 ERREARENLTVFSFLGPIVNLSEPTAHEGSTVTVSCMAGARVQVTLDGVPAAAPGQPAQL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 QLNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 QLNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 LQCQARGNPYPELRCLKEGSSREVPVGIPFFVNVTHNGTYQCQASSSRGKYTLVVVMDIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 LQCQARGNPYPELRCLKEGSSREVPVGIPFFVNVTHNGTYQCQASSSRGKYTLVVVMDIE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 AGSSHFVPVFVAVLLTLGVVTIVLALMYVFREHQRSGSYHVREESTYLPLTSMQPTEAMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 AGSSHFVPVFVAVLLTLGVVTIVLALMYVFREHQRSGSYHVREESTYLPLTSMQPTEAMG
490 500 510 520 530 540
pF1KB5 EEPSRAE
:::::::
NP_002 EEPSRAE
>>NP_001307535 (OMIM: 146631) intercellular adhesion mol (470 aa)
initn: 3133 init1: 3133 opt: 3133 Z-score: 3052.6 bits: 574.4 E(85289): 2.7e-163
Smith-Waterman score: 3133; 100.0% identity (100.0% similar) in 470 aa overlap (78-547:1-470)
50 60 70 80 90 100
pF1KB5 SLFVNCSTDCPSSEKIALETSLSKELVASGMGWAAFNLSNVTGNSRILCSVYCNGSQITG
::::::::::::::::::::::::::::::
NP_001 MGWAAFNLSNVTGNSRILCSVYCNGSQITG
10 20 30
110 120 130 140 150 160
pF1KB5 SSNITVYRLPERVELAPLPPWQPVGQNFTLRCQVEDGSPRTSLTVVLLRWEEELSRQPAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSNITVYRLPERVELAPLPPWQPVGQNFTLRCQVEDGSPRTSLTVVLLRWEEELSRQPAV
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB5 EEPAEVTATVLASRDDHGAPFSCRTELDMQPQGLGLFVNTSAPRQLRTFVLPVTPPRLVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEPAEVTATVLASRDDHGAPFSCRTELDMQPQGLGLFVNTSAPRQLRTFVLPVTPPRLVA
100 110 120 130 140 150
230 240 250 260 270 280
pF1KB5 PRFLEVETSWPVDCTLDGLFPASEAQVYLALGDQMLNATVMNHGDTLTATATATARADQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PRFLEVETSWPVDCTLDGLFPASEAQVYLALGDQMLNATVMNHGDTLTATATATARADQE
160 170 180 190 200 210
290 300 310 320 330 340
pF1KB5 GAREIVCNVTLGGERREARENLTVFSFLGPIVNLSEPTAHEGSTVTVSCMAGARVQVTLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GAREIVCNVTLGGERREARENLTVFSFLGPIVNLSEPTAHEGSTVTVSCMAGARVQVTLD
220 230 240 250 260 270
350 360 370 380 390 400
pF1KB5 GVPAAAPGQPAQLQLNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GVPAAAPGQPAQLQLNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATC
280 290 300 310 320 330
410 420 430 440 450 460
pF1KB5 PQHLKWKDKTRHVLQCQARGNPYPELRCLKEGSSREVPVGIPFFVNVTHNGTYQCQASSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PQHLKWKDKTRHVLQCQARGNPYPELRCLKEGSSREVPVGIPFFVNVTHNGTYQCQASSS
340 350 360 370 380 390
470 480 490 500 510 520
pF1KB5 RGKYTLVVVMDIEAGSSHFVPVFVAVLLTLGVVTIVLALMYVFREHQRSGSYHVREESTY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RGKYTLVVVMDIEAGSSHFVPVFVAVLLTLGVVTIVLALMYVFREHQRSGSYHVREESTY
400 410 420 430 440 450
530 540
pF1KB5 LPLTSMQPTEAMGEEPSRAE
::::::::::::::::::::
NP_001 LPLTSMQPTEAMGEEPSRAE
460 470
>>NP_001307537 (OMIM: 146631) intercellular adhesion mol (286 aa)
initn: 1882 init1: 1882 opt: 1882 Z-score: 1840.1 bits: 349.3 E(85289): 9.4e-96
Smith-Waterman score: 1882; 100.0% identity (100.0% similar) in 286 aa overlap (262-547:1-286)
240 250 260 270 280 290
pF1KB5 EVETSWPVDCTLDGLFPASEAQVYLALGDQMLNATVMNHGDTLTATATATARADQEGARE
::::::::::::::::::::::::::::::
NP_001 MLNATVMNHGDTLTATATATARADQEGARE
10 20 30
300 310 320 330 340 350
pF1KB5 IVCNVTLGGERREARENLTVFSFLGPIVNLSEPTAHEGSTVTVSCMAGARVQVTLDGVPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IVCNVTLGGERREARENLTVFSFLGPIVNLSEPTAHEGSTVTVSCMAGARVQVTLDGVPA
40 50 60 70 80 90
360 370 380 390 400 410
pF1KB5 AAPGQPAQLQLNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AAPGQPAQLQLNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHL
100 110 120 130 140 150
420 430 440 450 460 470
pF1KB5 KWKDKTRHVLQCQARGNPYPELRCLKEGSSREVPVGIPFFVNVTHNGTYQCQASSSRGKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KWKDKTRHVLQCQARGNPYPELRCLKEGSSREVPVGIPFFVNVTHNGTYQCQASSSRGKY
160 170 180 190 200 210
480 490 500 510 520 530
pF1KB5 TLVVVMDIEAGSSHFVPVFVAVLLTLGVVTIVLALMYVFREHQRSGSYHVREESTYLPLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLVVVMDIEAGSSHFVPVFVAVLLTLGVVTIVLALMYVFREHQRSGSYHVREESTYLPLT
220 230 240 250 260 270
540
pF1KB5 SMQPTEAMGEEPSRAE
::::::::::::::::
NP_001 SMQPTEAMGEEPSRAE
280
>>NP_001307534 (OMIM: 146631) intercellular adhesion mol (451 aa)
initn: 1573 init1: 1573 opt: 1584 Z-score: 1548.0 bits: 295.9 E(85289): 1.7e-79
Smith-Waterman score: 2824; 82.3% identity (82.4% similar) in 547 aa overlap (1-547:1-451)
10 20 30 40 50 60
pF1KB5 MATMVPSVLWPRACWTLLVCCLLTPGVQGQEFLLRVEPQNPVLSAGGSLFVNCSTDCPSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATMVPSVLWPRACWTLLVCCLLTPGVQGQEFLLRVEPQNPVLSAGGSLFVNCSTDCPSS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EKIALETSLSKELVASGMGWAAFNLSNVTGNSRILCSVYCNGSQITGSSNITVYRLPERV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EKIALETSLSKELVASGMGWAAFNLSNVTGNSRILCSVYCNGSQITGSSNITVYRLPERV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 ELAPLPPWQPVGQNFTLRCQVEDGSPRTSLTVVLLRWEEELSRQPAVEEPAEVTATVLAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELAPLPPWQPVGQNFTLRCQVEDGSPRTSLTVVLLRWEEELSRQPAVEEPAEVTATVLAS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 RDDHGAPFSCRTELDMQPQGLGLFVNTSAPRQLRTFVLPVTPPRLVAPRFLEVETSWPVD
::::::::::::::::::::::::::::::::::::
NP_001 RDDHGAPFSCRTELDMQPQGLGLFVNTSAPRQLRTF------------------------
190 200 210
250 260 270 280 290 300
pF1KB5 CTLDGLFPASEAQVYLALGDQMLNATVMNHGDTLTATATATARADQEGAREIVCNVTLGG
NP_001 ------------------------------------------------------------
310 320 330 340 350 360
pF1KB5 ERREARENLTVFSFLGPIVNLSEPTAHEGSTVTVSCMAGARVQVTLDGVPAAAPGQPAQL
.:::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ------------GFLGPIVNLSEPTAHEGSTVTVSCMAGARVQVTLDGVPAAAPGQPAQL
220 230 240 250 260
370 380 390 400 410 420
pF1KB5 QLNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHV
270 280 290 300 310 320
430 440 450 460 470 480
pF1KB5 LQCQARGNPYPELRCLKEGSSREVPVGIPFFVNVTHNGTYQCQASSSRGKYTLVVVMDIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQCQARGNPYPELRCLKEGSSREVPVGIPFFVNVTHNGTYQCQASSSRGKYTLVVVMDIE
330 340 350 360 370 380
490 500 510 520 530 540
pF1KB5 AGSSHFVPVFVAVLLTLGVVTIVLALMYVFREHQRSGSYHVREESTYLPLTSMQPTEAMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AGSSHFVPVFVAVLLTLGVVTIVLALMYVFREHQRSGSYHVREESTYLPLTSMQPTEAMG
390 400 410 420 430 440
pF1KB5 EEPSRAE
:::::::
NP_001 EEPSRAE
450
>>NP_003250 (OMIM: 601852) intercellular adhesion molecu (924 aa)
initn: 1537 init1: 1206 opt: 1586 Z-score: 1545.8 bits: 296.6 E(85289): 2.3e-79
Smith-Waterman score: 1586; 51.6% identity (76.5% similar) in 473 aa overlap (15-480:16-488)
10 20 30 40 50
pF1KB5 MATMVPSVLWPRACWTLLVCCLLTPGVQGQE-FLLRVEPQNPVLSAGGSLFVNCSTDCP
:. : :. .. .:: : ..:. . ::::..::::.::
NP_003 MPGPSPGLRRALLGLWAALGLGLFGLSAVSQEPFWADLQPRVAFVERGGSLWLNCSTNCP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 SSEKIALETSLSKELVASGMGWAAFNLSNVT-GNSRILCSVYCNGSQITGSSNITVYRLP
:. .::::: .. . :. : : .: .. ... .: : . . . : ... :
NP_003 RPERGGLETSLRRNGTQRGLRWLARQLVDIREPETQPVCFFRCARRTLQARGLIRTFQRP
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 ERVELAPLPPWQPVGQNFTLRCQVEDGSPRTSLTVVLLRWEEELSRQPAVEEP-----AE
.:::: :::::::::.:::: :.: ..::.:::..::: .:: :. . :: :
NP_003 DRVELMPLPPWQPVGENFTLSCRVPGAGPRASLTLTLLRGAQELIRRSFAGEPPRARGAV
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB5 VTATVLASRDDHGAPFSCRTELDMQPQGLGLFVNTSAPRQLRTFVLPVTPPRLVAPRFLE
.:::::: :.:::: ::::.:::..:.::::: :.::::.:::: : :::.:::.::
NP_003 LTATVLARREDHGANFSCRAELDLRPHGLGLFENSSAPRELRTFSLSPDAPRLAAPRLLE
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB5 VETSWPVDCTLDGLFPASEAQVYLALGDQMLNATVMNHGDTLTATATATARADQEGAREI
: . ::.::::::::::::.:::::::: :. : .::...::::::: :.:::::..
NP_003 VGSERPVSCTLDGLFPASEARVYLALGDQNLSPDVTLEGDAFVATATATASAEQEGARQL
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB5 VCNVTLGGERREARENLTVFSFLGPIVNLSEPTAHEGSTVTVSCMAGARVQVTLDGVPAA
::::::::: ::.:::.:..:: .:...::::.. ::. :::.: :::.. :::.:::::
NP_003 VCNVTLGGENRETRENVTIYSFPAPLLTLSEPSVSEGQMVTVTCAAGAQALVTLEGVPAA
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB5 APGQPAQLQLNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLK
.:::::::::::::.:: :::::.:::.:::: : .: :..:::::.:..: . ::.
NP_003 VPGQPAQLQLNATENDDRRSFFCDATLDVDGETLIKNRSAELRVLYAPRLDDSDCPRSWT
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB5 WKDKTRHVLQCQARGNPYPELRCLKEGSSREVPVGIPFFVNVTHNGTYQCQASSSRGKYT
: . ...:.:.::::: : ..: . .. . .:. :. . .:::.:.:....:. .
NP_003 WPEGPEQTLRCEARGNPEPSVHCARSDGGAVLALGLLGPVTRALSGTYRCKAANDQGEAV
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB5 LVVVMDIEAGSSHFVPVFVAVLLTLGVVTIVLALMYVFREHQRSGSYHVREESTYLPLTS
:.. .:
NP_003 KDVTLTVEYAPALDSVGCPERITWLEGTEASLSCVAHGVPPPDVICVRSGELGAVIEGLL
490 500 510 520 530 540
>>XP_011526531 (OMIM: 601852) PREDICTED: intercellular a (924 aa)
initn: 1537 init1: 1206 opt: 1586 Z-score: 1545.8 bits: 296.6 E(85289): 2.3e-79
Smith-Waterman score: 1586; 51.6% identity (76.5% similar) in 473 aa overlap (15-480:16-488)
10 20 30 40 50
pF1KB5 MATMVPSVLWPRACWTLLVCCLLTPGVQGQE-FLLRVEPQNPVLSAGGSLFVNCSTDCP
:. : :. .. .:: : ..:. . ::::..::::.::
XP_011 MPGPSPGLRRALLGLWAALGLGLFGLSAVSQEPFWADLQPRVAFVERGGSLWLNCSTNCP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 SSEKIALETSLSKELVASGMGWAAFNLSNVT-GNSRILCSVYCNGSQITGSSNITVYRLP
:. .::::: .. . :. : : .: .. ... .: : . . . : ... :
XP_011 RPERGGLETSLRRNGTQRGLRWLARQLVDIREPETQPVCFFRCARRTLQARGLIRTFQRP
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 ERVELAPLPPWQPVGQNFTLRCQVEDGSPRTSLTVVLLRWEEELSRQPAVEEP-----AE
.:::: :::::::::.:::: :.: ..::.:::..::: .:: :. . :: :
XP_011 DRVELMPLPPWQPVGENFTLSCRVPGAGPRASLTLTLLRGAQELIRRSFAGEPPRARGAV
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB5 VTATVLASRDDHGAPFSCRTELDMQPQGLGLFVNTSAPRQLRTFVLPVTPPRLVAPRFLE
.:::::: :.:::: ::::.:::..:.::::: :.::::.:::: : :::.:::.::
XP_011 LTATVLARREDHGANFSCRAELDLRPHGLGLFENSSAPRELRTFSLSPDAPRLAAPRLLE
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB5 VETSWPVDCTLDGLFPASEAQVYLALGDQMLNATVMNHGDTLTATATATARADQEGAREI
: . ::.::::::::::::.:::::::: :. : .::...::::::: :.:::::..
XP_011 VGSERPVSCTLDGLFPASEARVYLALGDQNLSPDVTLEGDAFVATATATASAEQEGARQL
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB5 VCNVTLGGERREARENLTVFSFLGPIVNLSEPTAHEGSTVTVSCMAGARVQVTLDGVPAA
::::::::: ::.:::.:..:: .:...::::.. ::. :::.: :::.. :::.:::::
XP_011 VCNVTLGGENRETRENVTIYSFPAPLLTLSEPSVSEGQMVTVTCAAGAQALVTLEGVPAA
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB5 APGQPAQLQLNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLK
.:::::::::::::.:: :::::.:::.:::: : .: :..:::::.:..: . ::.
XP_011 VPGQPAQLQLNATENDDRRSFFCDATLDVDGETLIKNRSAELRVLYAPRLDDSDCPRSWT
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB5 WKDKTRHVLQCQARGNPYPELRCLKEGSSREVPVGIPFFVNVTHNGTYQCQASSSRGKYT
: . ...:.:.::::: : ..: . .. . .:. :. . .:::.:.:....:. .
XP_011 WPEGPEQTLRCEARGNPEPSVHCARSDGGAVLALGLLGPVTRALSGTYRCKAANDQGEAV
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB5 LVVVMDIEAGSSHFVPVFVAVLLTLGVVTIVLALMYVFREHQRSGSYHVREESTYLPLTS
:.. .:
XP_011 KDVTLTVEYAPALDSVGCPERITWLEGTEASLSCVAHGVPPPDVICVRSGELGAVIEGLL
490 500 510 520 530 540
>>NP_000192 (OMIM: 147840,611162) intercellular adhesion (532 aa)
initn: 1491 init1: 1403 opt: 1577 Z-score: 1540.2 bits: 294.7 E(85289): 4.7e-79
Smith-Waterman score: 1577; 46.8% identity (74.1% similar) in 532 aa overlap (4-530:1-523)
10 20 30 40 50 60
pF1KB5 MATMVPSVLWPRACWTLLVCCLLTPGVQGQEFLLRVEPQNPVLSAGGSLFVNCSTDCPSS
:.:: : :.. : :: . . : :.. .: :::..:.:::.: .
NP_000 MAPSSPRPALPALLVLLGALFPGPGNAQ--TSVSPSKVILPRGGSVLVTCSTSCDQP
10 20 30 40 50
70 80 90 100 110
pF1KB5 EKIALETSL-SKELVASGMGWAAFNLSNVTGNSRILCSVYCNGSQITGSSNITVYRLPER
. ...:: : .:::. : . ...:::: .:. .: : .: :... .::: :::
NP_000 KLLGIETPLPKKELLLPGNNRKVYELSNVQEDSQPMCYSNCPDGQSTAKTFLTVYWTPER
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 VELAPLPPWQPVGQNFTLRCQVEDGSPRTSLTVVLLRWEEELSRQPAVEEPAEVTATVLA
::::::: :::::.:.::::::: :.::..::::::: :.::.:.::: ::::::.:::.
NP_000 VELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEVTTTVLV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 SRDDHGAPFSCRTELDMQPQGLGLFVNTSAPRQLRTFVLPVTPPRLVAPRFLEVETSWPV
:: ::: ::::::::..:::: :: ::::: ::.:::::.:::.::.:: :::.:. :
NP_000 RRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTV
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 DCTLDGLFPASEAQVYLALGDQMLNATVMNHGDTLTATATATARADQEGAREIVCNVTLG
:.::::::.:::::.:::::: :: :: .:...: :.... :..::.....: : ::
NP_000 VCSLDGLFPVSEAQVHLALGDQRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILG
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 GERREARENLTVFSFLGPIVNLSEPTAHEGSTVTVSCMAGARVQVTLDGVPAAAPGQPAQ
.. .:. ...:..:: .: : :..: . ::. :::.: : :..:::.:::: : ::
NP_000 NQSQETLQTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAHPRAKVTLNGVPAQPLGPRAQ
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB5 LQLNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRH
: :.:: :.:::: ::::::: :...:.:.. .:::::::..:. :: . : .....
NP_000 LLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQ
360 370 380 390 400 410
420 430 440 450 460 470
pF1KB5 VLQCQARGNPYPELRCLKEGSSREVPVGIPFFVNVTHNGTYQCQASSSRGKYTLVVVMDI
. .::: ::: :::.:::.:. .:.: :. .::: :.: :..:. : :....
NP_000 TPMCQAWGNPLPELKCLKDGTF-PLPIGESVTVTRDLEGTYLCRARSTQGEVTRKVTVNV
420 430 440 450 460 470
480 490 500 510 520 530
pF1KB5 EAGSSHFVPVFVAVLLTLGVVTIVLALM----YVFREHQRSGSYHVREESTYLPLTSMQP
. : . :..:. ....... :.. .... .:.... . :.
NP_000 ------LSPRYEIVIITVVAAAVIMGTAGLSTYLYNRQRKIKKYRLQQAQKGTPMKPNTQ
480 490 500 510 520
540
pF1KB5 TEAMGEEPSRAE
NP_000 ATPP
530
>>XP_016882674 (OMIM: 601852) PREDICTED: intercellular a (586 aa)
initn: 508 init1: 508 opt: 516 Z-score: 508.9 bits: 104.0 E(85289): 1.3e-21
Smith-Waterman score: 516; 49.7% identity (79.2% similar) in 149 aa overlap (332-480:2-150)
310 320 330 340 350 360
pF1KB5 RREARENLTVFSFLGPIVNLSEPTAHEGSTVTVSCMAGARVQVTLDGVPAAAPGQPAQLQ
:::.: :::.. :::.:::::.::::::::
XP_016 MVTVTCAAGAQALVTLEGVPAAVPGQPAQLQ
10 20 30
370 380 390 400 410 420
pF1KB5 LNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHVL
:::::.:: :::::.:::.:::: : .: :..:::::.:..: . ::. : . ...:
XP_016 LNATENDDRRSFFCDATLDVDGETLIKNRSAELRVLYAPRLDDSDCPRSWTWPEGPEQTL
40 50 60 70 80 90
430 440 450 460 470 480
pF1KB5 QCQARGNPYPELRCLKEGSSREVPVGIPFFVNVTHNGTYQCQASSSRGKYTLVVVMDIEA
.:.::::: : ..: . .. . .:. :. . .:::.:.:....:. . :.. .:
XP_016 RCEARGNPEPSVHCARSDGGAVLALGLLGPVTRALSGTYRCKAANDQGEAVKDVTLTVEY
100 110 120 130 140 150
490 500 510 520 530 540
pF1KB5 GSSHFVPVFVAVLLTLGVVTIVLALMYVFREHQRSGSYHVREESTYLPLTSMQPTEAMGE
XP_016 APALDSVGCPERITWLEGTEASLSCVAHGVPPPDVICVRSGELGAVIEGLLRVAREHAGT
160 170 180 190 200 210
>>NP_001093258 (OMIM: 146630) intercellular adhesion mol (275 aa)
initn: 428 init1: 302 opt: 419 Z-score: 418.9 bits: 86.3 E(85289): 1.3e-16
Smith-Waterman score: 419; 36.0% identity (63.1% similar) in 214 aa overlap (18-226:16-225)
10 20 30 40 50 60
pF1KB5 MATMVPSVLWPRACWTLLVCCLLTPGVQGQEFLLRVEPQNPVLSAGGSLFVNCSTDCPSS
:.:: :: . . : ..:.:.. .. ::: ::::: : .
NP_001 MSSFGYRTLTVALFTLICC---PGSDEKVFEVHVRPKKLAVEPKGSLEVNCSTTCNQP
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 EKIALETSLSKELVASGMGWAAFNLSNVTGNSRILCSVYCNGSQITGSSNITVYRLPERV
: .:::::.: :. : . .::.. .. . : :.:.: . .::..::. :..:
NP_001 EVGGLETSLDKILLDEQAQWKHYLVSNISHDTVLQCHFTCSGKQESMNSNVSVYQPPRQV
60 70 80 90 100 110
130 140 150 160 170
pF1KB5 ELAPLPPWQPVGQNFTLRCQVEDGSPRTSLTVVLLRWEEELSRQP---AVEEPAEVTATV
:. : ::..::..:.: : :::. :.: .: : . :. : :.:::
NP_001 ILTLQPTLVAVGKSFTIECRVPTVEPLDSLTLFLFRGNETLHYETFGKAAPAPQEATATF
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 --LASRDDHGAPFSCRTELDMQPQGLGLFVNTSAPRQLRTFVLPVTPPRLVAPRFLEVET
:.:.: ::: . ::.. .: ..: . :::..:. . ::. ..:
NP_001 NSTADREDGHRNFSCLAVLDLMSRGGNIFHKHSAPKMLEIYE-PVSDSQMVIIVTVVSVL
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 SWPVDCTLDGLFPASEAQVYLALGDQMLNATVMNHGDTLTATATATARADQEGAREIVCN
NP_001 LSLFVTSVLLCFIFGQHLRQQRMGTYGVRAAWRRLPQAFRP
240 250 260 270
>>NP_001093256 (OMIM: 146630) intercellular adhesion mol (275 aa)
initn: 428 init1: 302 opt: 419 Z-score: 418.9 bits: 86.3 E(85289): 1.3e-16
Smith-Waterman score: 419; 36.0% identity (63.1% similar) in 214 aa overlap (18-226:16-225)
10 20 30 40 50 60
pF1KB5 MATMVPSVLWPRACWTLLVCCLLTPGVQGQEFLLRVEPQNPVLSAGGSLFVNCSTDCPSS
:.:: :: . . : ..:.:.. .. ::: ::::: : .
NP_001 MSSFGYRTLTVALFTLICC---PGSDEKVFEVHVRPKKLAVEPKGSLEVNCSTTCNQP
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 EKIALETSLSKELVASGMGWAAFNLSNVTGNSRILCSVYCNGSQITGSSNITVYRLPERV
: .:::::.: :. : . .::.. .. . : :.:.: . .::..::. :..:
NP_001 EVGGLETSLDKILLDEQAQWKHYLVSNISHDTVLQCHFTCSGKQESMNSNVSVYQPPRQV
60 70 80 90 100 110
130 140 150 160 170
pF1KB5 ELAPLPPWQPVGQNFTLRCQVEDGSPRTSLTVVLLRWEEELSRQP---AVEEPAEVTATV
:. : ::..::..:.: : :::. :.: .: : . :. : :.:::
NP_001 ILTLQPTLVAVGKSFTIECRVPTVEPLDSLTLFLFRGNETLHYETFGKAAPAPQEATATF
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 --LASRDDHGAPFSCRTELDMQPQGLGLFVNTSAPRQLRTFVLPVTPPRLVAPRFLEVET
:.:.: ::: . ::.. .: ..: . :::..:. . ::. ..:
NP_001 NSTADREDGHRNFSCLAVLDLMSRGGNIFHKHSAPKMLEIYE-PVSDSQMVIIVTVVSVL
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 SWPVDCTLDGLFPASEAQVYLALGDQMLNATVMNHGDTLTATATATARADQEGAREIVCN
NP_001 LSLFVTSVLLCFIFGQHLRQQRMGTYGVRAAWRRLPQAFRP
240 250 260 270
547 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 21:37:47 2016 done: Fri Nov 4 21:37:49 2016
Total Scan time: 10.380 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]