Result of FASTA (ccds) for
pF1KB5974
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5974, 560 aa
1>>>pF1KB5974 560 - 560 aa - 560 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.0226+/-0.00103; mu= 2.1702+/- 0.062
mean_var=216.3222+/-44.160, 0's: 0 Z-trim(110.4): 79 B-trim: 23 in 1/51
Lambda= 0.087201
statistics sampled from 11547 (11616) to 11547 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.699), E-opt: 0.2 (0.357), width: 16
Scan time: 3.630
The best scores are: opt bits E(32554)
CCDS46534.1 AGFG1 gene_id:3267|Hs108|chr2 ( 560) 3682 476.3 4.1e-134
CCDS2467.1 AGFG1 gene_id:3267|Hs108|chr2 ( 562) 3668 474.6 1.4e-133
CCDS46533.1 AGFG1 gene_id:3267|Hs108|chr2 ( 584) 1922 254.9 1.9e-67
CCDS46535.1 AGFG1 gene_id:3267|Hs108|chr2 ( 522) 1778 236.8 5e-62
CCDS5697.1 AGFG2 gene_id:3268|Hs108|chr7 ( 481) 908 127.3 4.2e-29
>>CCDS46534.1 AGFG1 gene_id:3267|Hs108|chr2 (560 aa)
initn: 3682 init1: 3682 opt: 3682 Z-score: 2521.2 bits: 476.3 E(32554): 4.1e-134
Smith-Waterman score: 3682; 100.0% identity (100.0% similar) in 560 aa overlap (1-560:1-560)
10 20 30 40 50 60
pF1KB5 MAASAKRKQEEKHLKMLRDMTGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MAASAKRKQEEKHLKMLRDMTGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 PPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 PPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 YEKKRWYVPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGDSAPTLHLNKGTPSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 YEKKRWYVPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGDSAPTLHLNKGTPSQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 SPVVGRSQGQQQEKKQFDLLSDLGSDIFAAPAPQSTATANFANFAHFNSHAAQNSANADF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SPVVGRSQGQQQEKKQFDLLSDLGSDIFAAPAPQSTATANFANFAHFNSHAAQNSANADF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 ANFDAFGQSSGSSNFGGFPTASHSPFQPQTTGGSAASVNANFAHFDNFPKSSSADFGTFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 ANFDAFGQSSGSSNFGGFPTASHSPFQPQTTGGSAASVNANFAHFDNFPKSSSADFGTFN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 TSQSHQTASAVSKVSTNKAGLQTADKYAALANLDNIFSAGQGGDQGSGFGTTGKAPVGSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 TSQSHQTASAVSKVSTNKAGLQTADKYAALANLDNIFSAGQGGDQGSGFGTTGKAPVGSV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 VSVPSQSSASSDKYAALAELDSVFSSAATSSNAYTSTSNASSNVFGTVPVVASAQTQPAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 VSVPSQSSASSDKYAALAELDSVFSSAATSSNAYTSTSNASSNVFGTVPVVASAQTQPAS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 SSVPAPFGATPSTNPFVAAAGPSVASSTNPFQTNARGATAATFGTASMSMPTGFGTPAPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SSVPAPFGATPSTNPFVAAAGPSVASSTNPFQTNARGATAATFGTASMSMPTGFGTPAPY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 SLPTSFSGSFQQPAFPAQAAFPQQTAFSQQPNGFAAFGQTKPVVTPFGQVAAAGVSSNPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SLPTSFSGSFQQPAFPAQAAFPQQTAFSQQPNGFAAFGQTKPVVTPFGQVAAAGVSSNPF
490 500 510 520 530 540
550 560
pF1KB5 MTGAPTGQFPTGSSSTNPFL
::::::::::::::::::::
CCDS46 MTGAPTGQFPTGSSSTNPFL
550 560
>>CCDS2467.1 AGFG1 gene_id:3267|Hs108|chr2 (562 aa)
initn: 3368 init1: 3368 opt: 3668 Z-score: 2511.6 bits: 474.6 E(32554): 1.4e-133
Smith-Waterman score: 3668; 99.6% identity (99.6% similar) in 562 aa overlap (1-560:1-562)
10 20 30 40 50 60
pF1KB5 MAASAKRKQEEKHLKMLRDMTGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 MAASAKRKQEEKHLKMLRDMTGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 PPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 PPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 YEKKRWYVPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGDSAPTLHLNKGTPSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 YEKKRWYVPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGDSAPTLHLNKGTPSQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 SPVVGRSQGQQQEKKQFDLLSDLGSDIFAAPAPQSTATANFANFAHFNSHAAQNSANADF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 SPVVGRSQGQQQEKKQFDLLSDLGSDIFAAPAPQSTATANFANFAHFNSHAAQNSANADF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 ANFDAFGQSSGSSNFGGFPTASHSPFQPQTTGGSAASVNANFAHFDNFPKSSSADFGTFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 ANFDAFGQSSGSSNFGGFPTASHSPFQPQTTGGSAASVNANFAHFDNFPKSSSADFGTFN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 TSQSHQTASAVSKVSTNKAGLQTADKYAALANLDNIFSAGQGGDQGSGFGTTGKAPVGSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 TSQSHQTASAVSKVSTNKAGLQTADKYAALANLDNIFSAGQGGDQGSGFGTTGKAPVGSV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 VSVPSQSSASSDKYAALAELDSVFSSAATSSNAYTSTSNASSNVFGTVPVVASAQTQPAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 VSVPSQSSASSDKYAALAELDSVFSSAATSSNAYTSTSNASSNVFGTVPVVASAQTQPAS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 SSVPAPFGATPSTNPFVAAAGPSVASSTNPFQTNARGATAATFGTASMSMPTGFGTPAPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 SSVPAPFGATPSTNPFVAAAGPSVASSTNPFQTNARGATAATFGTASMSMPTGFGTPAPY
430 440 450 460 470 480
490 500 510 520 530
pF1KB5 SLPTSFSGSFQQPAFPAQAAFPQQTAFSQQPNG--FAAFGQTKPVVTPFGQVAAAGVSSN
::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::
CCDS24 SLPTSFSGSFQQPAFPAQAAFPQQTAFSQQPNGAGFAAFGQTKPVVTPFGQVAAAGVSSN
490 500 510 520 530 540
540 550 560
pF1KB5 PFMTGAPTGQFPTGSSSTNPFL
::::::::::::::::::::::
CCDS24 PFMTGAPTGQFPTGSSSTNPFL
550 560
>>CCDS46533.1 AGFG1 gene_id:3267|Hs108|chr2 (584 aa)
initn: 1980 init1: 1850 opt: 1922 Z-score: 1324.3 bits: 254.9 E(32554): 1.9e-67
Smith-Waterman score: 3616; 95.7% identity (95.9% similar) in 584 aa overlap (1-560:1-584)
10 20 30 40 50 60
pF1KB5 MAASAKRKQEEKHLKMLRDMTGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MAASAKRKQEEKHLKMLRDMTGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 PPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 PPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 YEKKRWYVPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGDSAPTLHLNKGTPSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 YEKKRWYVPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGDSAPTLHLNKGTPSQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 SPVVGRSQGQQQEKKQFDLLSDLGSDIFAAPAPQSTATANFANFAHFNSHAAQNSANADF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SPVVGRSQGQQQEKKQFDLLSDLGSDIFAAPAPQSTATANFANFAHFNSHAAQNSANADF
190 200 210 220 230 240
250 260 270
pF1KB5 ANFDAFGQSSGSSNFGGFPTASHSPFQPQTTG------------------------GSAA
:::::::::::::::::::::::::::::::. ::::
CCDS46 ANFDAFGQSSGSSNFGGFPTASHSPFQPQTTAFRMLSSSCSFGEFTSAFPLQATHSGSAA
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB5 SVNANFAHFDNFPKSSSADFGTFNTSQSHQTASAVSKVSTNKAGLQTADKYAALANLDNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SVNANFAHFDNFPKSSSADFGTFNTSQSHQTASAVSKVSTNKAGLQTADKYAALANLDNI
310 320 330 340 350 360
340 350 360 370 380 390
pF1KB5 FSAGQGGDQGSGFGTTGKAPVGSVVSVPSQSSASSDKYAALAELDSVFSSAATSSNAYTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 FSAGQGGDQGSGFGTTGKAPVGSVVSVPSQSSASSDKYAALAELDSVFSSAATSSNAYTS
370 380 390 400 410 420
400 410 420 430 440 450
pF1KB5 TSNASSNVFGTVPVVASAQTQPASSSVPAPFGATPSTNPFVAAAGPSVASSTNPFQTNAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 TSNASSNVFGTVPVVASAQTQPASSSVPAPFGATPSTNPFVAAAGPSVASSTNPFQTNAR
430 440 450 460 470 480
460 470 480 490 500 510
pF1KB5 GATAATFGTASMSMPTGFGTPAPYSLPTSFSGSFQQPAFPAQAAFPQQTAFSQQPNGFAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GATAATFGTASMSMPTGFGTPAPYSLPTSFSGSFQQPAFPAQAAFPQQTAFSQQPNGFAA
490 500 510 520 530 540
520 530 540 550 560
pF1KB5 FGQTKPVVTPFGQVAAAGVSSNPFMTGAPTGQFPTGSSSTNPFL
::::::::::::::::::::::::::::::::::::::::::::
CCDS46 FGQTKPVVTPFGQVAAAGVSSNPFMTGAPTGQFPTGSSSTNPFL
550 560 570 580
>>CCDS46535.1 AGFG1 gene_id:3267|Hs108|chr2 (522 aa)
initn: 2012 init1: 1563 opt: 1778 Z-score: 1227.0 bits: 236.8 E(32554): 5e-62
Smith-Waterman score: 3306; 92.5% identity (92.5% similar) in 562 aa overlap (1-560:1-522)
10 20 30 40 50 60
pF1KB5 MAASAKRKQEEKHLKMLRDMTGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MAASAKRKQEEKHLKMLRDMTGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 PPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 PPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 YEKKRWYVPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGDSAPTLHLNKGTPSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 YEKKRWYVPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGDSAPTLHLNKGTPSQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 SPVVGRSQGQQQEKKQFDLLSDLGSDIFAAPAPQSTATANFANFAHFNSHAAQNSANADF
:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SPVVGRSQGQQQEKKQFDLLSDLGSDIFAAPAPQSTATANFANFAHFNSHA---------
190 200 210 220 230
250 260 270 280 290 300
pF1KB5 ANFDAFGQSSGSSNFGGFPTASHSPFQPQTTGGSAASVNANFAHFDNFPKSSSADFGTFN
:::::::::::::::::::::::::::::
CCDS46 -------------------------------GGSAASVNANFAHFDNFPKSSSADFGTFN
240 250 260
310 320 330 340 350 360
pF1KB5 TSQSHQTASAVSKVSTNKAGLQTADKYAALANLDNIFSAGQGGDQGSGFGTTGKAPVGSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 TSQSHQTASAVSKVSTNKAGLQTADKYAALANLDNIFSAGQGGDQGSGFGTTGKAPVGSV
270 280 290 300 310 320
370 380 390 400 410 420
pF1KB5 VSVPSQSSASSDKYAALAELDSVFSSAATSSNAYTSTSNASSNVFGTVPVVASAQTQPAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 VSVPSQSSASSDKYAALAELDSVFSSAATSSNAYTSTSNASSNVFGTVPVVASAQTQPAS
330 340 350 360 370 380
430 440 450 460 470 480
pF1KB5 SSVPAPFGATPSTNPFVAAAGPSVASSTNPFQTNARGATAATFGTASMSMPTGFGTPAPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SSVPAPFGATPSTNPFVAAAGPSVASSTNPFQTNARGATAATFGTASMSMPTGFGTPAPY
390 400 410 420 430 440
490 500 510 520 530
pF1KB5 SLPTSFSGSFQQPAFPAQAAFPQQTAFSQQPNG--FAAFGQTKPVVTPFGQVAAAGVSSN
::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::
CCDS46 SLPTSFSGSFQQPAFPAQAAFPQQTAFSQQPNGAGFAAFGQTKPVVTPFGQVAAAGVSSN
450 460 470 480 490 500
540 550 560
pF1KB5 PFMTGAPTGQFPTGSSSTNPFL
::::::::::::::::::::::
CCDS46 PFMTGAPTGQFPTGSSSTNPFL
510 520
>>CCDS5697.1 AGFG2 gene_id:3268|Hs108|chr7 (481 aa)
initn: 988 init1: 635 opt: 908 Z-score: 636.0 bits: 127.3 E(32554): 4.2e-29
Smith-Waterman score: 1021; 39.7% identity (59.1% similar) in 562 aa overlap (15-560:31-481)
10 20 30 40
pF1KB5 MAASAKRKQEEKHLKMLRDMTGLPH--NRKCFDCDQRGPTYVNM
. .:.. : . ::.::.: ::: :::..
CCDS56 MVMAAKKGPGPGGGVSGGKAEAEAASEVWCRRVRELGGCSQAGNRHCFECAQRGVTYVDI
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB5 TVGSFVCTSCSGSLRGLNPPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSS
::::::::.::: :::::::::::::::::::. :. :::..:::::..::::::: :.:
CCDS56 TVGSFVCTTCSGLLRGLNPPHRVKSISMTTFTEPEVVFLQSRGNEVCRKIWLGLFDARTS
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB5 AIPDFRDPQKVKEFLQEKYEKKRWYVPPEQAKVVASVHASISGSSASSTSSTPEVKPLKS
.:: :::::::::::::::::::::::.:.: . ...: .:. .: :: :::..
CCDS56 LVPDSRDPQKVKEFLQEKYEKKRWYVPPDQVKGPTYTKGS---ASTPVQGSIPEGKPLRT
130 140 150 160 170
170 180 190 200 210
pF1KB5 LLGDSAPTLHLNKGTPSQSPV----VGRSQGQQQE--------KKQFDLLSDLGSDIFAA
:::: ::.: . .: :: :: . ::... . : . :::.:.:.: :::
CCDS56 LLGDPAPSLSVAASTSSQ-PVSQSHARTSQARSTQPPPHSSVKKASTDLLADIGGDPFAA
180 190 200 210 220 230
220 230 240 250 260 270
pF1KB5 PAPQSTATANFANFAHFNSHAAQNSANADFANFDAFGQSSGSSNFGGFPTASHSPFQPQT
: . : : :: : . ..:. ... :::::::... .:: ::..: :... :: :
CCDS56 P---QMAPA----FAAFPAFGGQTPSQGGFANFDAFSSGPSSSVFGSLPPAGQASFQAQP
240 250 260 270 280
280 290 300 310 320 330
pF1KB5 TGGSAASVNANFAHFDNFPKSSSADFGTFNTSQSHQTASAVSKVSTNKAGLQTADKYAAL
: : .::
CCDS56 T-----------------PAGSS-------------------------------------
290
340 350 360 370 380 390
pF1KB5 ANLDNIFSAGQGGDQGSGFGTTGKAPVGSVVSVPSQSSASSDKYAALAELDSVFSSAATS
::. ::.: :: .: :. .::.. : .. .. .
CCDS56 --------------QGTPFGATPLAP----ASQPN----------SLADVGSFLGPGVPA
300 310 320
400 410 420 430 440
pF1KB5 SNAYTSTSNASSNVFGTVPVVASAQTQPAS-SSVPAPFGATPSTNPFVAAAGPSVASSTN
... .: . . : :: . :. .. ::. ::: ::::.: :. : :::
CCDS56 AGVPSSLFGMA----GQVPPLQSVTMGGGGGSSTGLAFGAF--TNPFTAPAAQSPLPSTN
330 340 350 360 370 380
450 460 470 480 490 500
pF1KB5 PFQTNARGATAATFGTASMSMPTGFGTPAPYSLPT-SFSGSFQQPAFPAQAAFPQQTAFS
::: :. : . :: .: . : :: .: :: .:..:: : :: :. . ::
CCDS56 PFQPNGL-APGPGFGMSSAG-P-GFPQAVP---PTGAFASSFPAPLFPPQTPLVQQ----
390 400 410 420 430
510 520 530 540 550 560
pF1KB5 QQPNGFAAFGQTKPVVTPFGQVAAAGVSSNPFMTGAPTGQFPTGSSSTNPFL
:. ..:. .:..: :..: ::.:.:::::: .. : . .:::::
CCDS56 QNGSSFGDLGSAKLGQRPLSQ--PAGISTNPFMTGPSSSPFASKPPTTNPFL
440 450 460 470 480
560 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 10:49:54 2016 done: Sat Nov 5 10:49:54 2016
Total Scan time: 3.630 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]