Result of FASTA (omim) for
pF1KB5975
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5975, 519 aa
1>>>pF1KB5975 519 - 519 aa - 519 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.3758+/-0.000407; mu= 8.9084+/- 0.025
mean_var=127.0737+/-25.071, 0's: 0 Z-trim(114.6): 132 B-trim: 33 in 1/56
Lambda= 0.113775
statistics sampled from 24339 (24471) to 24339 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.642), E-opt: 0.2 (0.287), width: 16
Scan time: 9.480
The best scores are: opt bits E(85289)
NP_149017 (OMIM: 209900,600374,615982) Bardet-Bied ( 519) 3382 566.8 5.6e-161
XP_011520150 (OMIM: 209900,600374,615982) PREDICTE ( 347) 2249 380.7 3.8e-105
XP_016877940 (OMIM: 209900,600374,615982) PREDICTE ( 347) 2249 380.7 3.8e-105
XP_016877943 (OMIM: 209900,600374,615982) PREDICTE ( 347) 2249 380.7 3.8e-105
NP_001239607 (OMIM: 209900,600374,615982) Bardet-B ( 347) 2249 380.7 3.8e-105
XP_011520151 (OMIM: 209900,600374,615982) PREDICTE ( 347) 2249 380.7 3.8e-105
XP_016877941 (OMIM: 209900,600374,615982) PREDICTE ( 347) 2249 380.7 3.8e-105
XP_016877942 (OMIM: 209900,600374,615982) PREDICTE ( 347) 2249 380.7 3.8e-105
NP_001307594 (OMIM: 209900,600374,615982) Bardet-B ( 496) 1844 314.3 5.3e-85
XP_016877939 (OMIM: 209900,600374,615982) PREDICTE ( 504) 1844 314.3 5.4e-85
XP_011520153 (OMIM: 209900,600374,615982) PREDICTE ( 275) 1797 306.5 6.8e-83
XP_006720100 (OMIM: 608132,613464,615985) PREDICTE ( 475) 265 55.1 5.4e-07
NP_938052 (OMIM: 608132,613464,615985) tetratricop ( 475) 265 55.1 5.4e-07
NP_938051 (OMIM: 608132,613464,615985) tetratricop ( 505) 265 55.1 5.7e-07
XP_006720098 (OMIM: 608132,613464,615985) PREDICTE ( 505) 265 55.1 5.7e-07
NP_653197 (OMIM: 608132,613464,615985) tetratricop ( 515) 265 55.1 5.8e-07
XP_011534736 (OMIM: 608132,613464,615985) PREDICTE ( 501) 261 54.5 8.9e-07
NP_001275710 (OMIM: 608132,613464,615985) tetratri ( 531) 261 54.5 9.3e-07
XP_011534734 (OMIM: 608132,613464,615985) PREDICTE ( 531) 261 54.5 9.3e-07
NP_001275711 (OMIM: 608132,613464,615985) tetratri ( 317) 257 53.7 9.5e-07
XP_016876467 (OMIM: 608132,613464,615985) PREDICTE ( 447) 258 54.0 1.1e-06
XP_016876466 (OMIM: 608132,613464,615985) PREDICTE ( 477) 258 54.0 1.2e-06
XP_011534735 (OMIM: 608132,613464,615985) PREDICTE ( 503) 254 53.3 2e-06
NP_001275712 (OMIM: 608132,613464,615985) tetratri ( 276) 209 45.8 0.0002
XP_011534737 (OMIM: 608132,613464,615985) PREDICTE ( 276) 209 45.8 0.0002
XP_016880977 (OMIM: 116946) PREDICTED: cell divisi ( 427) 204 45.1 0.00051
NP_858059 (OMIM: 300255) UDP-N-acetylglucosamine-- (1036) 208 45.9 0.00068
NP_858058 (OMIM: 300255) UDP-N-acetylglucosamine-- (1046) 208 45.9 0.00068
XP_016880975 (OMIM: 116946) PREDICTED: cell divisi ( 720) 204 45.2 0.00079
XP_016880974 (OMIM: 116946) PREDICTED: cell divisi ( 721) 204 45.2 0.00079
XP_011523852 (OMIM: 116946) PREDICTED: cell divisi ( 727) 204 45.2 0.00079
XP_016880973 (OMIM: 116946) PREDICTED: cell divisi ( 762) 204 45.2 0.00083
NP_001280020 (OMIM: 116946) cell division cycle pr ( 763) 204 45.2 0.00083
XP_011523851 (OMIM: 116946) PREDICTED: cell divisi ( 769) 204 45.2 0.00083
XP_011523850 (OMIM: 116946) PREDICTED: cell divisi ( 769) 204 45.2 0.00083
NP_001280018 (OMIM: 116946) cell division cycle pr ( 823) 204 45.2 0.00088
NP_001247 (OMIM: 116946) cell division cycle prote ( 824) 204 45.2 0.00088
XP_011523848 (OMIM: 116946) PREDICTED: cell divisi ( 829) 204 45.2 0.00089
NP_001107563 (OMIM: 116946) cell division cycle pr ( 830) 204 45.2 0.00089
XP_016875496 (OMIM: 615855) PREDICTED: transmembra ( 618) 198 44.2 0.0014
NP_787057 (OMIM: 615855) transmembrane and TPR rep ( 774) 198 44.2 0.0017
XP_016875494 (OMIM: 615855) PREDICTED: transmembra ( 813) 198 44.2 0.0017
XP_016875493 (OMIM: 615855) PREDICTED: transmembra ( 875) 198 44.3 0.0018
NP_001180380 (OMIM: 615855) transmembrane and TPR ( 882) 198 44.3 0.0018
XP_016875492 (OMIM: 615855) PREDICTED: transmembra ( 888) 198 44.3 0.0019
XP_005253556 (OMIM: 615855) PREDICTED: transmembra ( 944) 198 44.3 0.002
XP_016880976 (OMIM: 116946) PREDICTED: cell divisi ( 708) 188 42.6 0.0048
XP_016880972 (OMIM: 116946) PREDICTED: cell divisi ( 768) 188 42.6 0.0051
XP_016880971 (OMIM: 116946) PREDICTED: cell divisi ( 769) 188 42.6 0.0051
XP_016880970 (OMIM: 116946) PREDICTED: cell divisi ( 774) 188 42.6 0.0052
>>NP_149017 (OMIM: 209900,600374,615982) Bardet-Biedl sy (519 aa)
initn: 3382 init1: 3382 opt: 3382 Z-score: 3011.1 bits: 566.8 E(85289): 5.6e-161
Smith-Waterman score: 3382; 99.8% identity (99.8% similar) in 519 aa overlap (1-519:1-519)
10 20 30 40 50 60
pF1KB5 MAEERVATRTQFPVSTESQKPRQKKAPEFPILEKQNWLIHLHYIRKDYEACKAVIKEQLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 MAEERVATRTQFPVSTESQKPRQKKAPEFPILEKQNWLIHLHYIRKDYEACKAVIKEQLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ETQGLCEYAIYVQALIFRLEGNIQESLELFQTCAVLSPQSADNLKQVARSLFLLGKHKAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 ETQGLCEYAIYVQALIFRLEGNIQESLELFQTCAVLSPQSADNLKQVARSLFLLGKHKAA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 IEVYNEAAKLNQKDWEISHNLGVCYIYLKQFNKAQDQLHNALNLNRHDLTYIMLGKIHLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 IEVYNEAAKLNQKDWEISHNLGVCYIYLKQFNKAQDQLHNALNLNRHDLTYIMLGKIHLL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 EGDLDKAIEVYKKAVEFSPENTELLTTLGLLYLQLGIYQKAFEHLGNALTYDPTNYKAIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 EGDLDKAIEVYKKAVEFSPENTELLTTLGLLYLQLGIYQKAFEHLGNALTYDPTNYKAIL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 AAGSMMQTHGDFDVALTKYRVVACAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 AAGSMMQTHGDFDVALTKYRVVACAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 PFDWKILYNLGLVHLTMQQYASAFHFLSAAINFQPKMGELYMLLAVALTNLEDTENAKRA
::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
NP_149 PFDWKILYNLGLVHLTMQQYASAFHFLSAAINFQPKMGELYMLLAVALTNLEDIENAKRA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 YAEAVHLDKCNPLVNLNYAVLLYNQGEKKNALAQYQEMEKKVSLLKDNSSLEFDSEMVEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 YAEAVHLDKCNPLVNLNYAVLLYNQGEKKNALAQYQEMEKKVSLLKDNSSLEFDSEMVEM
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 AQKLGAALQVGEALVWTKPVKDPKSKHQTTSTSKPASFQQPLGSNQALGQAMSSAAAYRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 AQKLGAALQVGEALVWTKPVKDPKSKHQTTSTSKPASFQQPLGSNQALGQAMSSAAAYRT
430 440 450 460 470 480
490 500 510
pF1KB5 LPSGAGGTSQFTKPPSLPLEPEPAVESSPTETSEQIREK
:::::::::::::::::::::::::::::::::::::::
NP_149 LPSGAGGTSQFTKPPSLPLEPEPAVESSPTETSEQIREK
490 500 510
>>XP_011520150 (OMIM: 209900,600374,615982) PREDICTED: B (347 aa)
initn: 2249 init1: 2249 opt: 2249 Z-score: 2008.6 bits: 380.7 E(85289): 3.8e-105
Smith-Waterman score: 2249; 99.7% identity (99.7% similar) in 347 aa overlap (173-519:1-347)
150 160 170 180 190 200
pF1KB5 VCYIYLKQFNKAQDQLHNALNLNRHDLTYIMLGKIHLLEGDLDKAIEVYKKAVEFSPENT
::::::::::::::::::::::::::::::
XP_011 MLGKIHLLEGDLDKAIEVYKKAVEFSPENT
10 20 30
210 220 230 240 250 260
pF1KB5 ELLTTLGLLYLQLGIYQKAFEHLGNALTYDPTNYKAILAAGSMMQTHGDFDVALTKYRVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ELLTTLGLLYLQLGIYQKAFEHLGNALTYDPTNYKAILAAGSMMQTHGDFDVALTKYRVV
40 50 60 70 80 90
270 280 290 300 310 320
pF1KB5 ACAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQYAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ACAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQYAS
100 110 120 130 140 150
330 340 350 360 370 380
pF1KB5 AFHFLSAAINFQPKMGELYMLLAVALTNLEDTENAKRAYAEAVHLDKCNPLVNLNYAVLL
::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::
XP_011 AFHFLSAAINFQPKMGELYMLLAVALTNLEDIENAKRAYAEAVHLDKCNPLVNLNYAVLL
160 170 180 190 200 210
390 400 410 420 430 440
pF1KB5 YNQGEKKNALAQYQEMEKKVSLLKDNSSLEFDSEMVEMAQKLGAALQVGEALVWTKPVKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YNQGEKKNALAQYQEMEKKVSLLKDNSSLEFDSEMVEMAQKLGAALQVGEALVWTKPVKD
220 230 240 250 260 270
450 460 470 480 490 500
pF1KB5 PKSKHQTTSTSKPASFQQPLGSNQALGQAMSSAAAYRTLPSGAGGTSQFTKPPSLPLEPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PKSKHQTTSTSKPASFQQPLGSNQALGQAMSSAAAYRTLPSGAGGTSQFTKPPSLPLEPE
280 290 300 310 320 330
510
pF1KB5 PAVESSPTETSEQIREK
:::::::::::::::::
XP_011 PAVESSPTETSEQIREK
340
>>XP_016877940 (OMIM: 209900,600374,615982) PREDICTED: B (347 aa)
initn: 2249 init1: 2249 opt: 2249 Z-score: 2008.6 bits: 380.7 E(85289): 3.8e-105
Smith-Waterman score: 2249; 99.7% identity (99.7% similar) in 347 aa overlap (173-519:1-347)
150 160 170 180 190 200
pF1KB5 VCYIYLKQFNKAQDQLHNALNLNRHDLTYIMLGKIHLLEGDLDKAIEVYKKAVEFSPENT
::::::::::::::::::::::::::::::
XP_016 MLGKIHLLEGDLDKAIEVYKKAVEFSPENT
10 20 30
210 220 230 240 250 260
pF1KB5 ELLTTLGLLYLQLGIYQKAFEHLGNALTYDPTNYKAILAAGSMMQTHGDFDVALTKYRVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELLTTLGLLYLQLGIYQKAFEHLGNALTYDPTNYKAILAAGSMMQTHGDFDVALTKYRVV
40 50 60 70 80 90
270 280 290 300 310 320
pF1KB5 ACAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQYAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ACAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQYAS
100 110 120 130 140 150
330 340 350 360 370 380
pF1KB5 AFHFLSAAINFQPKMGELYMLLAVALTNLEDTENAKRAYAEAVHLDKCNPLVNLNYAVLL
::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::
XP_016 AFHFLSAAINFQPKMGELYMLLAVALTNLEDIENAKRAYAEAVHLDKCNPLVNLNYAVLL
160 170 180 190 200 210
390 400 410 420 430 440
pF1KB5 YNQGEKKNALAQYQEMEKKVSLLKDNSSLEFDSEMVEMAQKLGAALQVGEALVWTKPVKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YNQGEKKNALAQYQEMEKKVSLLKDNSSLEFDSEMVEMAQKLGAALQVGEALVWTKPVKD
220 230 240 250 260 270
450 460 470 480 490 500
pF1KB5 PKSKHQTTSTSKPASFQQPLGSNQALGQAMSSAAAYRTLPSGAGGTSQFTKPPSLPLEPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PKSKHQTTSTSKPASFQQPLGSNQALGQAMSSAAAYRTLPSGAGGTSQFTKPPSLPLEPE
280 290 300 310 320 330
510
pF1KB5 PAVESSPTETSEQIREK
:::::::::::::::::
XP_016 PAVESSPTETSEQIREK
340
>>XP_016877943 (OMIM: 209900,600374,615982) PREDICTED: B (347 aa)
initn: 2249 init1: 2249 opt: 2249 Z-score: 2008.6 bits: 380.7 E(85289): 3.8e-105
Smith-Waterman score: 2249; 99.7% identity (99.7% similar) in 347 aa overlap (173-519:1-347)
150 160 170 180 190 200
pF1KB5 VCYIYLKQFNKAQDQLHNALNLNRHDLTYIMLGKIHLLEGDLDKAIEVYKKAVEFSPENT
::::::::::::::::::::::::::::::
XP_016 MLGKIHLLEGDLDKAIEVYKKAVEFSPENT
10 20 30
210 220 230 240 250 260
pF1KB5 ELLTTLGLLYLQLGIYQKAFEHLGNALTYDPTNYKAILAAGSMMQTHGDFDVALTKYRVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELLTTLGLLYLQLGIYQKAFEHLGNALTYDPTNYKAILAAGSMMQTHGDFDVALTKYRVV
40 50 60 70 80 90
270 280 290 300 310 320
pF1KB5 ACAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQYAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ACAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQYAS
100 110 120 130 140 150
330 340 350 360 370 380
pF1KB5 AFHFLSAAINFQPKMGELYMLLAVALTNLEDTENAKRAYAEAVHLDKCNPLVNLNYAVLL
::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::
XP_016 AFHFLSAAINFQPKMGELYMLLAVALTNLEDIENAKRAYAEAVHLDKCNPLVNLNYAVLL
160 170 180 190 200 210
390 400 410 420 430 440
pF1KB5 YNQGEKKNALAQYQEMEKKVSLLKDNSSLEFDSEMVEMAQKLGAALQVGEALVWTKPVKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YNQGEKKNALAQYQEMEKKVSLLKDNSSLEFDSEMVEMAQKLGAALQVGEALVWTKPVKD
220 230 240 250 260 270
450 460 470 480 490 500
pF1KB5 PKSKHQTTSTSKPASFQQPLGSNQALGQAMSSAAAYRTLPSGAGGTSQFTKPPSLPLEPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PKSKHQTTSTSKPASFQQPLGSNQALGQAMSSAAAYRTLPSGAGGTSQFTKPPSLPLEPE
280 290 300 310 320 330
510
pF1KB5 PAVESSPTETSEQIREK
:::::::::::::::::
XP_016 PAVESSPTETSEQIREK
340
>>NP_001239607 (OMIM: 209900,600374,615982) Bardet-Biedl (347 aa)
initn: 2249 init1: 2249 opt: 2249 Z-score: 2008.6 bits: 380.7 E(85289): 3.8e-105
Smith-Waterman score: 2249; 99.7% identity (99.7% similar) in 347 aa overlap (173-519:1-347)
150 160 170 180 190 200
pF1KB5 VCYIYLKQFNKAQDQLHNALNLNRHDLTYIMLGKIHLLEGDLDKAIEVYKKAVEFSPENT
::::::::::::::::::::::::::::::
NP_001 MLGKIHLLEGDLDKAIEVYKKAVEFSPENT
10 20 30
210 220 230 240 250 260
pF1KB5 ELLTTLGLLYLQLGIYQKAFEHLGNALTYDPTNYKAILAAGSMMQTHGDFDVALTKYRVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELLTTLGLLYLQLGIYQKAFEHLGNALTYDPTNYKAILAAGSMMQTHGDFDVALTKYRVV
40 50 60 70 80 90
270 280 290 300 310 320
pF1KB5 ACAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQYAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ACAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQYAS
100 110 120 130 140 150
330 340 350 360 370 380
pF1KB5 AFHFLSAAINFQPKMGELYMLLAVALTNLEDTENAKRAYAEAVHLDKCNPLVNLNYAVLL
::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::
NP_001 AFHFLSAAINFQPKMGELYMLLAVALTNLEDIENAKRAYAEAVHLDKCNPLVNLNYAVLL
160 170 180 190 200 210
390 400 410 420 430 440
pF1KB5 YNQGEKKNALAQYQEMEKKVSLLKDNSSLEFDSEMVEMAQKLGAALQVGEALVWTKPVKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YNQGEKKNALAQYQEMEKKVSLLKDNSSLEFDSEMVEMAQKLGAALQVGEALVWTKPVKD
220 230 240 250 260 270
450 460 470 480 490 500
pF1KB5 PKSKHQTTSTSKPASFQQPLGSNQALGQAMSSAAAYRTLPSGAGGTSQFTKPPSLPLEPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PKSKHQTTSTSKPASFQQPLGSNQALGQAMSSAAAYRTLPSGAGGTSQFTKPPSLPLEPE
280 290 300 310 320 330
510
pF1KB5 PAVESSPTETSEQIREK
:::::::::::::::::
NP_001 PAVESSPTETSEQIREK
340
>>XP_011520151 (OMIM: 209900,600374,615982) PREDICTED: B (347 aa)
initn: 2249 init1: 2249 opt: 2249 Z-score: 2008.6 bits: 380.7 E(85289): 3.8e-105
Smith-Waterman score: 2249; 99.7% identity (99.7% similar) in 347 aa overlap (173-519:1-347)
150 160 170 180 190 200
pF1KB5 VCYIYLKQFNKAQDQLHNALNLNRHDLTYIMLGKIHLLEGDLDKAIEVYKKAVEFSPENT
::::::::::::::::::::::::::::::
XP_011 MLGKIHLLEGDLDKAIEVYKKAVEFSPENT
10 20 30
210 220 230 240 250 260
pF1KB5 ELLTTLGLLYLQLGIYQKAFEHLGNALTYDPTNYKAILAAGSMMQTHGDFDVALTKYRVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ELLTTLGLLYLQLGIYQKAFEHLGNALTYDPTNYKAILAAGSMMQTHGDFDVALTKYRVV
40 50 60 70 80 90
270 280 290 300 310 320
pF1KB5 ACAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQYAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ACAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQYAS
100 110 120 130 140 150
330 340 350 360 370 380
pF1KB5 AFHFLSAAINFQPKMGELYMLLAVALTNLEDTENAKRAYAEAVHLDKCNPLVNLNYAVLL
::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::
XP_011 AFHFLSAAINFQPKMGELYMLLAVALTNLEDIENAKRAYAEAVHLDKCNPLVNLNYAVLL
160 170 180 190 200 210
390 400 410 420 430 440
pF1KB5 YNQGEKKNALAQYQEMEKKVSLLKDNSSLEFDSEMVEMAQKLGAALQVGEALVWTKPVKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YNQGEKKNALAQYQEMEKKVSLLKDNSSLEFDSEMVEMAQKLGAALQVGEALVWTKPVKD
220 230 240 250 260 270
450 460 470 480 490 500
pF1KB5 PKSKHQTTSTSKPASFQQPLGSNQALGQAMSSAAAYRTLPSGAGGTSQFTKPPSLPLEPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PKSKHQTTSTSKPASFQQPLGSNQALGQAMSSAAAYRTLPSGAGGTSQFTKPPSLPLEPE
280 290 300 310 320 330
510
pF1KB5 PAVESSPTETSEQIREK
:::::::::::::::::
XP_011 PAVESSPTETSEQIREK
340
>>XP_016877941 (OMIM: 209900,600374,615982) PREDICTED: B (347 aa)
initn: 2249 init1: 2249 opt: 2249 Z-score: 2008.6 bits: 380.7 E(85289): 3.8e-105
Smith-Waterman score: 2249; 99.7% identity (99.7% similar) in 347 aa overlap (173-519:1-347)
150 160 170 180 190 200
pF1KB5 VCYIYLKQFNKAQDQLHNALNLNRHDLTYIMLGKIHLLEGDLDKAIEVYKKAVEFSPENT
::::::::::::::::::::::::::::::
XP_016 MLGKIHLLEGDLDKAIEVYKKAVEFSPENT
10 20 30
210 220 230 240 250 260
pF1KB5 ELLTTLGLLYLQLGIYQKAFEHLGNALTYDPTNYKAILAAGSMMQTHGDFDVALTKYRVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELLTTLGLLYLQLGIYQKAFEHLGNALTYDPTNYKAILAAGSMMQTHGDFDVALTKYRVV
40 50 60 70 80 90
270 280 290 300 310 320
pF1KB5 ACAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQYAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ACAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQYAS
100 110 120 130 140 150
330 340 350 360 370 380
pF1KB5 AFHFLSAAINFQPKMGELYMLLAVALTNLEDTENAKRAYAEAVHLDKCNPLVNLNYAVLL
::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::
XP_016 AFHFLSAAINFQPKMGELYMLLAVALTNLEDIENAKRAYAEAVHLDKCNPLVNLNYAVLL
160 170 180 190 200 210
390 400 410 420 430 440
pF1KB5 YNQGEKKNALAQYQEMEKKVSLLKDNSSLEFDSEMVEMAQKLGAALQVGEALVWTKPVKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YNQGEKKNALAQYQEMEKKVSLLKDNSSLEFDSEMVEMAQKLGAALQVGEALVWTKPVKD
220 230 240 250 260 270
450 460 470 480 490 500
pF1KB5 PKSKHQTTSTSKPASFQQPLGSNQALGQAMSSAAAYRTLPSGAGGTSQFTKPPSLPLEPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PKSKHQTTSTSKPASFQQPLGSNQALGQAMSSAAAYRTLPSGAGGTSQFTKPPSLPLEPE
280 290 300 310 320 330
510
pF1KB5 PAVESSPTETSEQIREK
:::::::::::::::::
XP_016 PAVESSPTETSEQIREK
340
>>XP_016877942 (OMIM: 209900,600374,615982) PREDICTED: B (347 aa)
initn: 2249 init1: 2249 opt: 2249 Z-score: 2008.6 bits: 380.7 E(85289): 3.8e-105
Smith-Waterman score: 2249; 99.7% identity (99.7% similar) in 347 aa overlap (173-519:1-347)
150 160 170 180 190 200
pF1KB5 VCYIYLKQFNKAQDQLHNALNLNRHDLTYIMLGKIHLLEGDLDKAIEVYKKAVEFSPENT
::::::::::::::::::::::::::::::
XP_016 MLGKIHLLEGDLDKAIEVYKKAVEFSPENT
10 20 30
210 220 230 240 250 260
pF1KB5 ELLTTLGLLYLQLGIYQKAFEHLGNALTYDPTNYKAILAAGSMMQTHGDFDVALTKYRVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELLTTLGLLYLQLGIYQKAFEHLGNALTYDPTNYKAILAAGSMMQTHGDFDVALTKYRVV
40 50 60 70 80 90
270 280 290 300 310 320
pF1KB5 ACAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQYAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ACAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQYAS
100 110 120 130 140 150
330 340 350 360 370 380
pF1KB5 AFHFLSAAINFQPKMGELYMLLAVALTNLEDTENAKRAYAEAVHLDKCNPLVNLNYAVLL
::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::
XP_016 AFHFLSAAINFQPKMGELYMLLAVALTNLEDIENAKRAYAEAVHLDKCNPLVNLNYAVLL
160 170 180 190 200 210
390 400 410 420 430 440
pF1KB5 YNQGEKKNALAQYQEMEKKVSLLKDNSSLEFDSEMVEMAQKLGAALQVGEALVWTKPVKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YNQGEKKNALAQYQEMEKKVSLLKDNSSLEFDSEMVEMAQKLGAALQVGEALVWTKPVKD
220 230 240 250 260 270
450 460 470 480 490 500
pF1KB5 PKSKHQTTSTSKPASFQQPLGSNQALGQAMSSAAAYRTLPSGAGGTSQFTKPPSLPLEPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PKSKHQTTSTSKPASFQQPLGSNQALGQAMSSAAAYRTLPSGAGGTSQFTKPPSLPLEPE
280 290 300 310 320 330
510
pF1KB5 PAVESSPTETSEQIREK
:::::::::::::::::
XP_016 PAVESSPTETSEQIREK
340
>>NP_001307594 (OMIM: 209900,600374,615982) Bardet-Biedl (496 aa)
initn: 1837 init1: 1837 opt: 1844 Z-score: 1647.0 bits: 314.3 E(85289): 5.3e-85
Smith-Waterman score: 3171; 95.4% identity (95.4% similar) in 519 aa overlap (1-519:1-496)
10 20 30 40 50 60
pF1KB5 MAEERVATRTQFPVSTESQKPRQKKAPEFPILEKQNWLIHLHYIRKDYEACKAVIKEQLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAEERVATRTQFPVSTESQKPRQKKAPEFPILEKQNWLIHLHYIRKDYEACKAVIKEQLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ETQGLCEYAIYVQALIFRLEGNIQESLELFQTCAVLSPQSADNLKQVARSLFLLGKHKAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETQGLCEYAIYVQALIFRLEGNIQESLELFQTCAVLSPQSADNLKQVARSLFLLGKHKAA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 IEVYNEAAKLNQKDWEISHNLGVCYIYLKQFNKAQDQLHNALNLNRHDLTYIMLGKIHLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IEVYNEAAKLNQKDWEISHNLGVCYIYLKQFNKAQDQLHNALNLNRHDLTYIMLGKIHLL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 EGDLDKAIEVYKKAVEFSPENTELLTTLGLLYLQLGIYQKAFEHLGNALTYDPTNYKAIL
:::::::::::::::::::::::::::::::::: :::
NP_001 EGDLDKAIEVYKKAVEFSPENTELLTTLGLLYLQ-----------------------AIL
190 200 210
250 260 270 280 290 300
pF1KB5 AAGSMMQTHGDFDVALTKYRVVACAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AAGSMMQTHGDFDVALTKYRVVACAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLA
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB5 PFDWKILYNLGLVHLTMQQYASAFHFLSAAINFQPKMGELYMLLAVALTNLEDTENAKRA
::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
NP_001 PFDWKILYNLGLVHLTMQQYASAFHFLSAAINFQPKMGELYMLLAVALTNLEDIENAKRA
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB5 YAEAVHLDKCNPLVNLNYAVLLYNQGEKKNALAQYQEMEKKVSLLKDNSSLEFDSEMVEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YAEAVHLDKCNPLVNLNYAVLLYNQGEKKNALAQYQEMEKKVSLLKDNSSLEFDSEMVEM
340 350 360 370 380 390
430 440 450 460 470 480
pF1KB5 AQKLGAALQVGEALVWTKPVKDPKSKHQTTSTSKPASFQQPLGSNQALGQAMSSAAAYRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AQKLGAALQVGEALVWTKPVKDPKSKHQTTSTSKPASFQQPLGSNQALGQAMSSAAAYRT
400 410 420 430 440 450
490 500 510
pF1KB5 LPSGAGGTSQFTKPPSLPLEPEPAVESSPTETSEQIREK
:::::::::::::::::::::::::::::::::::::::
NP_001 LPSGAGGTSQFTKPPSLPLEPEPAVESSPTETSEQIREK
460 470 480 490
>>XP_016877939 (OMIM: 209900,600374,615982) PREDICTED: B (504 aa)
initn: 1837 init1: 1837 opt: 1844 Z-score: 1646.9 bits: 314.3 E(85289): 5.4e-85
Smith-Waterman score: 3126; 94.9% identity (94.9% similar) in 514 aa overlap (6-519:14-504)
10 20 30 40 50
pF1KB5 MAEERVATRTQFPVSTESQKPRQKKAPEFPILEKQNWLIHLHYIRKDYEACK
: ::::::::::::::::::::::::::::::::::::::::::::
XP_016 MALTVVPSFSVSGVWKRTQFPVSTESQKPRQKKAPEFPILEKQNWLIHLHYIRKDYEACK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 AVIKEQLQETQGLCEYAIYVQALIFRLEGNIQESLELFQTCAVLSPQSADNLKQVARSLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVIKEQLQETQGLCEYAIYVQALIFRLEGNIQESLELFQTCAVLSPQSADNLKQVARSLF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 LLGKHKAAIEVYNEAAKLNQKDWEISHNLGVCYIYLKQFNKAQDQLHNALNLNRHDLTYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLGKHKAAIEVYNEAAKLNQKDWEISHNLGVCYIYLKQFNKAQDQLHNALNLNRHDLTYI
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB5 MLGKIHLLEGDLDKAIEVYKKAVEFSPENTELLTTLGLLYLQLGIYQKAFEHLGNALTYD
::::::::::::::::::::::::::::::::::::::::::
XP_016 MLGKIHLLEGDLDKAIEVYKKAVEFSPENTELLTTLGLLYLQ------------------
190 200 210 220
240 250 260 270 280 290
pF1KB5 PTNYKAILAAGSMMQTHGDFDVALTKYRVVACAVPESPPLWNNIGMCFFGKKKYVAAISC
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 -----AILAAGSMMQTHGDFDVALTKYRVVACAVPESPPLWNNIGMCFFGKKKYVAAISC
230 240 250 260 270
300 310 320 330 340 350
pF1KB5 LKRANYLAPFDWKILYNLGLVHLTMQQYASAFHFLSAAINFQPKMGELYMLLAVALTNLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKRANYLAPFDWKILYNLGLVHLTMQQYASAFHFLSAAINFQPKMGELYMLLAVALTNLE
280 290 300 310 320 330
360 370 380 390 400 410
pF1KB5 DTENAKRAYAEAVHLDKCNPLVNLNYAVLLYNQGEKKNALAQYQEMEKKVSLLKDNSSLE
: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DIENAKRAYAEAVHLDKCNPLVNLNYAVLLYNQGEKKNALAQYQEMEKKVSLLKDNSSLE
340 350 360 370 380 390
420 430 440 450 460 470
pF1KB5 FDSEMVEMAQKLGAALQVGEALVWTKPVKDPKSKHQTTSTSKPASFQQPLGSNQALGQAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FDSEMVEMAQKLGAALQVGEALVWTKPVKDPKSKHQTTSTSKPASFQQPLGSNQALGQAM
400 410 420 430 440 450
480 490 500 510
pF1KB5 SSAAAYRTLPSGAGGTSQFTKPPSLPLEPEPAVESSPTETSEQIREK
:::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSAAAYRTLPSGAGGTSQFTKPPSLPLEPEPAVESSPTETSEQIREK
460 470 480 490 500
519 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 18:38:14 2016 done: Sat Nov 5 18:38:15 2016
Total Scan time: 9.480 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]