Result of FASTA (ccds) for
pF1KB6003
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6003, 1198 aa
1>>>pF1KB6003 1198 - 1198 aa - 1198 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.9122+/-0.00105; mu= 14.4298+/- 0.063
mean_var=99.0454+/-19.883, 0's: 0 Z-trim(106.3): 34 B-trim: 0 in 0/49
Lambda= 0.128872
statistics sampled from 8874 (8887) to 8874 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.632), E-opt: 0.2 (0.273), width: 16
Scan time: 3.840
The best scores are: opt bits E(32554)
CCDS76396.1 TTC17 gene_id:55761|Hs108|chr11 ( 956) 6368 1195.3 0
CCDS31466.1 TTC17 gene_id:55761|Hs108|chr11 (1141) 5068 953.6 0
>>CCDS76396.1 TTC17 gene_id:55761|Hs108|chr11 (956 aa)
initn: 6368 init1: 6368 opt: 6368 Z-score: 6396.6 bits: 1195.3 E(32554): 0
Smith-Waterman score: 6368; 100.0% identity (100.0% similar) in 946 aa overlap (1-946:1-946)
10 20 30 40 50 60
pF1KB6 MAAAVGVRGRYELPPCSGPGWLLSLSALLSVAARGAFATTHWVVTEDGKIQQQVDSPMNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 MAAAVGVRGRYELPPCSGPGWLLSLSALLSVAARGAFATTHWVVTEDGKIQQQVDSPMNL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 KHPHDLVILMRQEATVNYLKELEKQLVAQKIHIEENEDRDTGLEQRHNKEDPDCIKAKVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 KHPHDLVILMRQEATVNYLKELEKQLVAQKIHIEENEDRDTGLEQRHNKEDPDCIKAKVP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LGDLDLYDGTYITLESKDISPEDYIDTESPVPPDPEQPDCTKILELPYSIHAFQHLRGVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 LGDLDLYDGTYITLESKDISPEDYIDTESPVPPDPEQPDCTKILELPYSIHAFQHLRGVQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 ERVNLSAPLLPKEDPIFTYLSKRLGRSIDDIGHLIHEGLQKNTSSWVLYNMASFYWRIKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 ERVNLSAPLLPKEDPIFTYLSKRLGRSIDDIGHLIHEGLQKNTSSWVLYNMASFYWRIKN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 EPYQVVECAMRALHFSSRHNKDIALVNLANVLHRAHFSADAAVVVHAALDDSDFFTSYYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 EPYQVVECAMRALHFSSRHNKDIALVNLANVLHRAHFSADAAVVVHAALDDSDFFTSYYT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 LGNIYAMLGEYNHSVLCYDHALQARPGFEQAIKRKHAVLCQQKLEQKLEAQHRSLQRTLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 LGNIYAMLGEYNHSVLCYDHALQARPGFEQAIKRKHAVLCQQKLEQKLEAQHRSLQRTLN
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 ELKEYQKQHDHYLRQQEILEKHKLIQEEQILRNIIHETQMAKEAQLGNHQICRLVNQQHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 ELKEYQKQHDHYLRQQEILEKHKLIQEEQILRNIIHETQMAKEAQLGNHQICRLVNQQHS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 LHCQWDQPVRYHRGDIFENVDYVQFGEDSSTSSMMSVNFDVQSNQSDINDSVKSSPVAHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 LHCQWDQPVRYHRGDIFENVDYVQFGEDSSTSSMMSVNFDVQSNQSDINDSVKSSPVAHS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 ILWIWGRDSDAYRDKQHILWPKRADCTESYPRVPVGGELPTYFLPPENKGLRIHELSSDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 ILWIWGRDSDAYRDKQHILWPKRADCTESYPRVPVGGELPTYFLPPENKGLRIHELSSDD
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 YSTEEEAQTPDCSITDFRKSHTLSYLVKELEVRMDLKAKMPDDHARKILLSRINNYTIPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 YSTEEEAQTPDCSITDFRKSHTLSYLVKELEVRMDLKAKMPDDHARKILLSRINNYTIPE
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB6 EEIGSFLFHAINKPNAPIWLILNEAGLYWRAVGNSTFAIACLQRALNLAPLQYQDVPLVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 EEIGSFLFHAINKPNAPIWLILNEAGLYWRAVGNSTFAIACLQRALNLAPLQYQDVPLVN
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB6 LANLLIHYGLHLDATKLLLQALAINSSEPLTFLSLGNAYLALKNISGALEAFRQALKLTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 LANLLIHYGLHLDATKLLLQALAINSSEPLTFLSLGNAYLALKNISGALEAFRQALKLTT
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB6 KCPECENSLKLIRCMQFYPFLYNITSSVCSGNCHEKTLDNSHDKQKYFDNSQSLDAAEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 KCPECENSLKLIRCMQFYPFLYNITSSVCSGNCHEKTLDNSHDKQKYFDNSQSLDAAEEE
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB6 PSERGTEEDPVFSVENSGRDSDALRLESTVVEESNGSDEMENSDETKMSEEILALVDEFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 PSERGTEEDPVFSVENSGRDSDALRLESTVVEESNGSDEMENSDETKMSEEILALVDEFQ
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB6 QAWPLEGFGGALEMKGRRLDLQGIRVLKKGPQDGVARSSCYGDCRSEDDEATEWITFQVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 QAWPLEGFGGALEMKGRRLDLQGIRVLKKGPQDGVARSSCYGDCRSEDDEATEWITFQVK
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB6 RVKKPKGDHKKTPGKKVETGQIENGHRYQANLEITGPKVASPGPQGKKRDYQRLGWPSPD
::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 RVKKPKGDHKKTPGKKVETGQIENGHRYQANLEITGPKVASPGPQGLLDWKTRKVP
910 920 930 940 950
970 980 990 1000 1010 1020
pF1KB6 ECLKLRWVELTAIVSTWLAVSSKNIDITEHIDFATPIQQPAMEPLCNGNLPTSMHTLDHL
>>CCDS31466.1 TTC17 gene_id:55761|Hs108|chr11 (1141 aa)
initn: 5059 init1: 5059 opt: 5068 Z-score: 5089.1 bits: 953.6 E(32554): 0
Smith-Waterman score: 7561; 95.2% identity (95.2% similar) in 1198 aa overlap (1-1198:1-1141)
10 20 30 40 50 60
pF1KB6 MAAAVGVRGRYELPPCSGPGWLLSLSALLSVAARGAFATTHWVVTEDGKIQQQVDSPMNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MAAAVGVRGRYELPPCSGPGWLLSLSALLSVAARGAFATTHWVVTEDGKIQQQVDSPMNL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 KHPHDLVILMRQEATVNYLKELEKQLVAQKIHIEENEDRDTGLEQRHNKEDPDCIKAKVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 KHPHDLVILMRQEATVNYLKELEKQLVAQKIHIEENEDRDTGLEQRHNKEDPDCIKAKVP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LGDLDLYDGTYITLESKDISPEDYIDTESPVPPDPEQPDCTKILELPYSIHAFQHLRGVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LGDLDLYDGTYITLESKDISPEDYIDTESPVPPDPEQPDCTKILELPYSIHAFQHLRGVQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 ERVNLSAPLLPKEDPIFTYLSKRLGRSIDDIGHLIHEGLQKNTSSWVLYNMASFYWRIKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 ERVNLSAPLLPKEDPIFTYLSKRLGRSIDDIGHLIHEGLQKNTSSWVLYNMASFYWRIKN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 EPYQVVECAMRALHFSSRHNKDIALVNLANVLHRAHFSADAAVVVHAALDDSDFFTSYYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 EPYQVVECAMRALHFSSRHNKDIALVNLANVLHRAHFSADAAVVVHAALDDSDFFTSYYT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 LGNIYAMLGEYNHSVLCYDHALQARPGFEQAIKRKHAVLCQQKLEQKLEAQHRSLQRTLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LGNIYAMLGEYNHSVLCYDHALQARPGFEQAIKRKHAVLCQQKLEQKLEAQHRSLQRTLN
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 ELKEYQKQHDHYLRQQEILEKHKLIQEEQILRNIIHETQMAKEAQLGNHQICRLVNQQHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 ELKEYQKQHDHYLRQQEILEKHKLIQEEQILRNIIHETQMAKEAQLGNHQICRLVNQQHS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 LHCQWDQPVRYHRGDIFENVDYVQFGEDSSTSSMMSVNFDVQSNQSDINDSVKSSPVAHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LHCQWDQPVRYHRGDIFENVDYVQFGEDSSTSSMMSVNFDVQSNQSDINDSVKSSPVAHS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 ILWIWGRDSDAYRDKQHILWPKRADCTESYPRVPVGGELPTYFLPPENKGLRIHELSSDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 ILWIWGRDSDAYRDKQHILWPKRADCTESYPRVPVGGELPTYFLPPENKGLRIHELSSDD
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 YSTEEEAQTPDCSITDFRKSHTLSYLVKELEVRMDLKAKMPDDHARKILLSRINNYTIPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 YSTEEEAQTPDCSITDFRKSHTLSYLVKELEVRMDLKAKMPDDHARKILLSRINNYTIPE
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB6 EEIGSFLFHAINKPNAPIWLILNEAGLYWRAVGNSTFAIACLQRALNLAPLQYQDVPLVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 EEIGSFLFHAINKPNAPIWLILNEAGLYWRAVGNSTFAIACLQRALNLAPLQYQDVPLVN
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB6 LANLLIHYGLHLDATKLLLQALAINSSEPLTFLSLGNAYLALKNISGALEAFRQALKLTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LANLLIHYGLHLDATKLLLQALAINSSEPLTFLSLGNAYLALKNISGALEAFRQALKLTT
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB6 KCPECENSLKLIRCMQFYPFLYNITSSVCSGNCHEKTLDNSHDKQKYFDNSQSLDAAEEE
:::::::::::::::::::::::::::::::
CCDS31 KCPECENSLKLIRCMQFYPFLYNITSSVCSG-----------------------------
730 740 750
790 800 810 820 830 840
pF1KB6 PSERGTEEDPVFSVENSGRDSDALRLESTVVEESNGSDEMENSDETKMSEEILALVDEFQ
::::::::::::::::::::::::::::::::
CCDS31 ----------------------------TVVEESNGSDEMENSDETKMSEEILALVDEFQ
760 770 780
850 860 870 880 890 900
pF1KB6 QAWPLEGFGGALEMKGRRLDLQGIRVLKKGPQDGVARSSCYGDCRSEDDEATEWITFQVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 QAWPLEGFGGALEMKGRRLDLQGIRVLKKGPQDGVARSSCYGDCRSEDDEATEWITFQVK
790 800 810 820 830 840
910 920 930 940 950 960
pF1KB6 RVKKPKGDHKKTPGKKVETGQIENGHRYQANLEITGPKVASPGPQGKKRDYQRLGWPSPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 RVKKPKGDHKKTPGKKVETGQIENGHRYQANLEITGPKVASPGPQGKKRDYQRLGWPSPD
850 860 870 880 890 900
970 980 990 1000 1010 1020
pF1KB6 ECLKLRWVELTAIVSTWLAVSSKNIDITEHIDFATPIQQPAMEPLCNGNLPTSMHTLDHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 ECLKLRWVELTAIVSTWLAVSSKNIDITEHIDFATPIQQPAMEPLCNGNLPTSMHTLDHL
910 920 930 940 950 960
1030 1040 1050 1060 1070 1080
pF1KB6 HGVSNRASLHYTGESQLTEVLQNLGKDQYPQQSLEQIGTRIAKVLEKNQTSWVLSSMAAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 HGVSNRASLHYTGESQLTEVLQNLGKDQYPQQSLEQIGTRIAKVLEKNQTSWVLSSMAAL
970 980 990 1000 1010 1020
1090 1100 1110 1120 1130 1140
pF1KB6 YWRVKGQGKKAIDCLRQALHYAPHQMKDVPLISLANILHNAKLWNDAVIVATMAVEIAPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 YWRVKGQGKKAIDCLRQALHYAPHQMKDVPLISLANILHNAKLWNDAVIVATMAVEIAPH
1030 1040 1050 1060 1070 1080
1150 1160 1170 1180 1190
pF1KB6 FAVNHFTLGNVYVAMEEFEKALVWYESTLKLQPEFVPAKNRIQTIQCHLMLKKGRRSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 FAVNHFTLGNVYVAMEEFEKALVWYESTLKLQPEFVPAKNRIQTIQCHLMLKKGRRSP
1090 1100 1110 1120 1130 1140
1198 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 22:47:53 2016 done: Thu Nov 3 22:47:54 2016
Total Scan time: 3.840 Total Display time: 0.100
Function used was FASTA [36.3.4 Apr, 2011]