Result of FASTA (omim) for
pF1KB6010
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6010, 1231 aa
1>>>pF1KB6010 1231 - 1231 aa - 1231 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5305+/-0.000454; mu= 23.1491+/- 0.028
mean_var=98.6109+/-19.890, 0's: 0 Z-trim(111.4): 34 B-trim: 565 in 1/52
Lambda= 0.129155
statistics sampled from 20014 (20048) to 20014 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.577), E-opt: 0.2 (0.235), width: 16
Scan time: 15.560
The best scores are: opt bits E(85289)
XP_005262418 (OMIM: 300826) PREDICTED: cohesin sub (1231) 8096 1520.3 0
XP_016884723 (OMIM: 300826) PREDICTED: cohesin sub (1231) 8096 1520.3 0
XP_016884722 (OMIM: 300826) PREDICTED: cohesin sub (1231) 8096 1520.3 0
XP_016884721 (OMIM: 300826) PREDICTED: cohesin sub (1231) 8096 1520.3 0
NP_006594 (OMIM: 300826) cohesin subunit SA-2 isof (1231) 8096 1520.3 0
NP_001269347 (OMIM: 300826) cohesin subunit SA-2 i (1231) 8096 1520.3 0
NP_001036216 (OMIM: 300826) cohesin subunit SA-2 i (1231) 8096 1520.3 0
XP_005262415 (OMIM: 300826) PREDICTED: cohesin sub (1268) 7601 1428.1 0
NP_001036215 (OMIM: 300826) cohesin subunit SA-2 i (1268) 7601 1428.1 0
XP_011529555 (OMIM: 300826) PREDICTED: cohesin sub (1268) 7601 1428.1 0
XP_005262416 (OMIM: 300826) PREDICTED: cohesin sub (1268) 7601 1428.1 0
NP_001036214 (OMIM: 300826) cohesin subunit SA-2 i (1268) 7601 1428.1 0
XP_005262417 (OMIM: 300826) PREDICTED: cohesin sub (1268) 7601 1428.1 0
XP_006724790 (OMIM: 300826) PREDICTED: cohesin sub (1268) 7601 1428.1 0
XP_005262414 (OMIM: 300826) PREDICTED: cohesin sub (1268) 7601 1428.1 0
XP_016884724 (OMIM: 300826) PREDICTED: cohesin sub (1199) 7121 1338.7 0
XP_006724791 (OMIM: 300826) PREDICTED: cohesin sub (1199) 7121 1338.7 0
NP_005853 (OMIM: 604358) cohesin subunit SA-1 [Hom (1258) 5509 1038.3 0
XP_016861012 (OMIM: 604358) PREDICTED: cohesin sub (1121) 5087 959.6 0
XP_011510633 (OMIM: 604358) PREDICTED: cohesin sub (1121) 5087 959.6 0
XP_011510631 (OMIM: 604358) PREDICTED: cohesin sub (1121) 5087 959.6 0
XP_016861013 (OMIM: 604358) PREDICTED: cohesin sub (1032) 4519 853.8 0
NP_001269646 (OMIM: 608489,615723) cohesin subunit (1226) 3714 703.8 1.7e-201
XP_011514044 (OMIM: 608489,615723) PREDICTED: cohe (1226) 3714 703.8 1.7e-201
XP_016867172 (OMIM: 608489,615723) PREDICTED: cohe (1239) 3714 703.8 1.7e-201
XP_016867174 (OMIM: 608489,615723) PREDICTED: cohe (1239) 3714 703.8 1.7e-201
XP_016867173 (OMIM: 608489,615723) PREDICTED: cohe (1239) 3714 703.8 1.7e-201
NP_001269645 (OMIM: 608489,615723) cohesin subunit (1225) 3713 703.7 1.9e-201
NP_036579 (OMIM: 608489,615723) cohesin subunit SA (1225) 3713 703.7 1.9e-201
XP_016867175 (OMIM: 608489,615723) PREDICTED: cohe (1238) 3713 703.7 2e-201
NP_001269647 (OMIM: 608489,615723) cohesin subunit (1167) 3390 643.4 2.5e-183
XP_016867176 (OMIM: 608489,615723) PREDICTED: cohe (1180) 3390 643.5 2.5e-183
XP_016861014 (OMIM: 604358) PREDICTED: cohesin sub ( 821) 3281 623.0 2.5e-177
XP_016867686 (OMIM: 612550) PREDICTED: tripartite ( 185) 475 99.5 2.1e-20
>>XP_005262418 (OMIM: 300826) PREDICTED: cohesin subunit (1231 aa)
initn: 8096 init1: 8096 opt: 8096 Z-score: 8151.2 bits: 1520.3 E(85289): 0
Smith-Waterman score: 8096; 100.0% identity (100.0% similar) in 1231 aa overlap (1-1231:1-1231)
10 20 30 40 50 60
pF1KB6 MIAAPEIPTDFNLLQESETHFSSDTDFEDIEGKNQKQGKGKTCKKGKKGPAEKGKGGNGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MIAAPEIPTDFNLLQESETHFSSDTDFEDIEGKNQKQGKGKTCKKGKKGPAEKGKGGNGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 GKPPSGPNRMNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GKPPSGPNRMNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 FIQCSGCKGVVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FIQCSGCKGVVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 VLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 MDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 IAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKEL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 NSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 HRPVAVAAGEFLYKKLFSRRDPEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HRPVAVAAGEFLYKKLFSRRDPEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 VDSMWDCATELLKDWECMNSLLLEEPLSGEEALTDRQESALIEIMLCTIRQAAECHPPVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VDSMWDCATELLKDWECMNSLLLEEPLSGEEALTDRQESALIEIMLCTIRQAAECHPPVG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 RGTGKRVLTAKEKKTQLDDRTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RGTGKRVLTAKEKKTQLDDRTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIY
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB6 TTGRLEKHLDALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TTGRLEKHLDALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDE
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB6 LADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGI
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB6 ENGDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ENGDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVN
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB6 TTVKEQAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TTVKEQAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDD
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB6 NNSADGQQEDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NNSADGQQEDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDII
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB6 KETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFG
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB6 LDQLKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LDQLKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYV
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB6 YLEKFMTFQMSLRREDVWLPLMSYRNSLLAGGDDDTMSVISGISSRGSTVRSKKSKPSTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YLEKFMTFQMSLRREDVWLPLMSYRNSLLAGGDDDTMSVISGISSRGSTVRSKKSKPSTG
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KB6 KRKVVEGMQLSLTEESSSSDSMWLSREQTLHTPVMMQTPQLTSTIMREPKRLRPEDSFMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KRKVVEGMQLSLTEESSSSDSMWLSREQTLHTPVMMQTPQLTSTIMREPKRLRPEDSFMS
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KB6 VYPMQTEHHQTPLDYNRRGTSLMEDDEEPIVEDVMMSSEGRIEDLNEGMDFDTMDIDLPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VYPMQTEHHQTPLDYNRRGTSLMEDDEEPIVEDVMMSSEGRIEDLNEGMDFDTMDIDLPP
1150 1160 1170 1180 1190 1200
1210 1220 1230
pF1KB6 SKNRRERTELKPDFFDPASIMDESVLGVSMF
:::::::::::::::::::::::::::::::
XP_005 SKNRRERTELKPDFFDPASIMDESVLGVSMF
1210 1220 1230
>>XP_016884723 (OMIM: 300826) PREDICTED: cohesin subunit (1231 aa)
initn: 8096 init1: 8096 opt: 8096 Z-score: 8151.2 bits: 1520.3 E(85289): 0
Smith-Waterman score: 8096; 100.0% identity (100.0% similar) in 1231 aa overlap (1-1231:1-1231)
10 20 30 40 50 60
pF1KB6 MIAAPEIPTDFNLLQESETHFSSDTDFEDIEGKNQKQGKGKTCKKGKKGPAEKGKGGNGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MIAAPEIPTDFNLLQESETHFSSDTDFEDIEGKNQKQGKGKTCKKGKKGPAEKGKGGNGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 GKPPSGPNRMNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GKPPSGPNRMNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 FIQCSGCKGVVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FIQCSGCKGVVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 VLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 MDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 IAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKEL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 NSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 HRPVAVAAGEFLYKKLFSRRDPEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HRPVAVAAGEFLYKKLFSRRDPEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 VDSMWDCATELLKDWECMNSLLLEEPLSGEEALTDRQESALIEIMLCTIRQAAECHPPVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VDSMWDCATELLKDWECMNSLLLEEPLSGEEALTDRQESALIEIMLCTIRQAAECHPPVG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 RGTGKRVLTAKEKKTQLDDRTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RGTGKRVLTAKEKKTQLDDRTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIY
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB6 TTGRLEKHLDALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TTGRLEKHLDALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDE
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB6 LADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGI
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB6 ENGDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ENGDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVN
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB6 TTVKEQAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TTVKEQAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDD
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB6 NNSADGQQEDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NNSADGQQEDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDII
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB6 KETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFG
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB6 LDQLKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LDQLKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYV
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB6 YLEKFMTFQMSLRREDVWLPLMSYRNSLLAGGDDDTMSVISGISSRGSTVRSKKSKPSTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YLEKFMTFQMSLRREDVWLPLMSYRNSLLAGGDDDTMSVISGISSRGSTVRSKKSKPSTG
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KB6 KRKVVEGMQLSLTEESSSSDSMWLSREQTLHTPVMMQTPQLTSTIMREPKRLRPEDSFMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRKVVEGMQLSLTEESSSSDSMWLSREQTLHTPVMMQTPQLTSTIMREPKRLRPEDSFMS
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KB6 VYPMQTEHHQTPLDYNRRGTSLMEDDEEPIVEDVMMSSEGRIEDLNEGMDFDTMDIDLPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VYPMQTEHHQTPLDYNRRGTSLMEDDEEPIVEDVMMSSEGRIEDLNEGMDFDTMDIDLPP
1150 1160 1170 1180 1190 1200
1210 1220 1230
pF1KB6 SKNRRERTELKPDFFDPASIMDESVLGVSMF
:::::::::::::::::::::::::::::::
XP_016 SKNRRERTELKPDFFDPASIMDESVLGVSMF
1210 1220 1230
>>XP_016884722 (OMIM: 300826) PREDICTED: cohesin subunit (1231 aa)
initn: 8096 init1: 8096 opt: 8096 Z-score: 8151.2 bits: 1520.3 E(85289): 0
Smith-Waterman score: 8096; 100.0% identity (100.0% similar) in 1231 aa overlap (1-1231:1-1231)
10 20 30 40 50 60
pF1KB6 MIAAPEIPTDFNLLQESETHFSSDTDFEDIEGKNQKQGKGKTCKKGKKGPAEKGKGGNGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MIAAPEIPTDFNLLQESETHFSSDTDFEDIEGKNQKQGKGKTCKKGKKGPAEKGKGGNGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 GKPPSGPNRMNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GKPPSGPNRMNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 FIQCSGCKGVVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FIQCSGCKGVVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 VLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 MDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 IAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKEL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 NSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 HRPVAVAAGEFLYKKLFSRRDPEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HRPVAVAAGEFLYKKLFSRRDPEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 VDSMWDCATELLKDWECMNSLLLEEPLSGEEALTDRQESALIEIMLCTIRQAAECHPPVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VDSMWDCATELLKDWECMNSLLLEEPLSGEEALTDRQESALIEIMLCTIRQAAECHPPVG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 RGTGKRVLTAKEKKTQLDDRTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RGTGKRVLTAKEKKTQLDDRTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIY
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB6 TTGRLEKHLDALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TTGRLEKHLDALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDE
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB6 LADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGI
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB6 ENGDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ENGDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVN
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB6 TTVKEQAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TTVKEQAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDD
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB6 NNSADGQQEDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NNSADGQQEDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDII
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB6 KETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFG
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB6 LDQLKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LDQLKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYV
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB6 YLEKFMTFQMSLRREDVWLPLMSYRNSLLAGGDDDTMSVISGISSRGSTVRSKKSKPSTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YLEKFMTFQMSLRREDVWLPLMSYRNSLLAGGDDDTMSVISGISSRGSTVRSKKSKPSTG
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KB6 KRKVVEGMQLSLTEESSSSDSMWLSREQTLHTPVMMQTPQLTSTIMREPKRLRPEDSFMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRKVVEGMQLSLTEESSSSDSMWLSREQTLHTPVMMQTPQLTSTIMREPKRLRPEDSFMS
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KB6 VYPMQTEHHQTPLDYNRRGTSLMEDDEEPIVEDVMMSSEGRIEDLNEGMDFDTMDIDLPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VYPMQTEHHQTPLDYNRRGTSLMEDDEEPIVEDVMMSSEGRIEDLNEGMDFDTMDIDLPP
1150 1160 1170 1180 1190 1200
1210 1220 1230
pF1KB6 SKNRRERTELKPDFFDPASIMDESVLGVSMF
:::::::::::::::::::::::::::::::
XP_016 SKNRRERTELKPDFFDPASIMDESVLGVSMF
1210 1220 1230
>>XP_016884721 (OMIM: 300826) PREDICTED: cohesin subunit (1231 aa)
initn: 8096 init1: 8096 opt: 8096 Z-score: 8151.2 bits: 1520.3 E(85289): 0
Smith-Waterman score: 8096; 100.0% identity (100.0% similar) in 1231 aa overlap (1-1231:1-1231)
10 20 30 40 50 60
pF1KB6 MIAAPEIPTDFNLLQESETHFSSDTDFEDIEGKNQKQGKGKTCKKGKKGPAEKGKGGNGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MIAAPEIPTDFNLLQESETHFSSDTDFEDIEGKNQKQGKGKTCKKGKKGPAEKGKGGNGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 GKPPSGPNRMNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GKPPSGPNRMNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 FIQCSGCKGVVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FIQCSGCKGVVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 VLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 MDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 IAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKEL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 NSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 HRPVAVAAGEFLYKKLFSRRDPEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HRPVAVAAGEFLYKKLFSRRDPEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 VDSMWDCATELLKDWECMNSLLLEEPLSGEEALTDRQESALIEIMLCTIRQAAECHPPVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VDSMWDCATELLKDWECMNSLLLEEPLSGEEALTDRQESALIEIMLCTIRQAAECHPPVG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 RGTGKRVLTAKEKKTQLDDRTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RGTGKRVLTAKEKKTQLDDRTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIY
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB6 TTGRLEKHLDALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TTGRLEKHLDALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDE
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB6 LADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGI
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB6 ENGDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ENGDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVN
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB6 TTVKEQAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TTVKEQAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDD
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB6 NNSADGQQEDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NNSADGQQEDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDII
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB6 KETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFG
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB6 LDQLKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LDQLKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYV
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB6 YLEKFMTFQMSLRREDVWLPLMSYRNSLLAGGDDDTMSVISGISSRGSTVRSKKSKPSTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YLEKFMTFQMSLRREDVWLPLMSYRNSLLAGGDDDTMSVISGISSRGSTVRSKKSKPSTG
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KB6 KRKVVEGMQLSLTEESSSSDSMWLSREQTLHTPVMMQTPQLTSTIMREPKRLRPEDSFMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRKVVEGMQLSLTEESSSSDSMWLSREQTLHTPVMMQTPQLTSTIMREPKRLRPEDSFMS
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KB6 VYPMQTEHHQTPLDYNRRGTSLMEDDEEPIVEDVMMSSEGRIEDLNEGMDFDTMDIDLPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VYPMQTEHHQTPLDYNRRGTSLMEDDEEPIVEDVMMSSEGRIEDLNEGMDFDTMDIDLPP
1150 1160 1170 1180 1190 1200
1210 1220 1230
pF1KB6 SKNRRERTELKPDFFDPASIMDESVLGVSMF
:::::::::::::::::::::::::::::::
XP_016 SKNRRERTELKPDFFDPASIMDESVLGVSMF
1210 1220 1230
>>NP_006594 (OMIM: 300826) cohesin subunit SA-2 isoform (1231 aa)
initn: 8096 init1: 8096 opt: 8096 Z-score: 8151.2 bits: 1520.3 E(85289): 0
Smith-Waterman score: 8096; 100.0% identity (100.0% similar) in 1231 aa overlap (1-1231:1-1231)
10 20 30 40 50 60
pF1KB6 MIAAPEIPTDFNLLQESETHFSSDTDFEDIEGKNQKQGKGKTCKKGKKGPAEKGKGGNGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MIAAPEIPTDFNLLQESETHFSSDTDFEDIEGKNQKQGKGKTCKKGKKGPAEKGKGGNGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 GKPPSGPNRMNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 GKPPSGPNRMNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 FIQCSGCKGVVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 FIQCSGCKGVVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 VLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 VLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 MDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 IAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 IAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKEL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 NSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 NSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 HRPVAVAAGEFLYKKLFSRRDPEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 HRPVAVAAGEFLYKKLFSRRDPEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 VDSMWDCATELLKDWECMNSLLLEEPLSGEEALTDRQESALIEIMLCTIRQAAECHPPVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 VDSMWDCATELLKDWECMNSLLLEEPLSGEEALTDRQESALIEIMLCTIRQAAECHPPVG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 RGTGKRVLTAKEKKTQLDDRTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 RGTGKRVLTAKEKKTQLDDRTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIY
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB6 TTGRLEKHLDALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 TTGRLEKHLDALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDE
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB6 LADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGI
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB6 ENGDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 ENGDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVN
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB6 TTVKEQAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 TTVKEQAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDD
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB6 NNSADGQQEDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 NNSADGQQEDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDII
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB6 KETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 KETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFG
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB6 LDQLKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LDQLKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYV
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB6 YLEKFMTFQMSLRREDVWLPLMSYRNSLLAGGDDDTMSVISGISSRGSTVRSKKSKPSTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 YLEKFMTFQMSLRREDVWLPLMSYRNSLLAGGDDDTMSVISGISSRGSTVRSKKSKPSTG
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KB6 KRKVVEGMQLSLTEESSSSDSMWLSREQTLHTPVMMQTPQLTSTIMREPKRLRPEDSFMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 KRKVVEGMQLSLTEESSSSDSMWLSREQTLHTPVMMQTPQLTSTIMREPKRLRPEDSFMS
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KB6 VYPMQTEHHQTPLDYNRRGTSLMEDDEEPIVEDVMMSSEGRIEDLNEGMDFDTMDIDLPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 VYPMQTEHHQTPLDYNRRGTSLMEDDEEPIVEDVMMSSEGRIEDLNEGMDFDTMDIDLPP
1150 1160 1170 1180 1190 1200
1210 1220 1230
pF1KB6 SKNRRERTELKPDFFDPASIMDESVLGVSMF
:::::::::::::::::::::::::::::::
NP_006 SKNRRERTELKPDFFDPASIMDESVLGVSMF
1210 1220 1230
>>NP_001269347 (OMIM: 300826) cohesin subunit SA-2 isofo (1231 aa)
initn: 8096 init1: 8096 opt: 8096 Z-score: 8151.2 bits: 1520.3 E(85289): 0
Smith-Waterman score: 8096; 100.0% identity (100.0% similar) in 1231 aa overlap (1-1231:1-1231)
10 20 30 40 50 60
pF1KB6 MIAAPEIPTDFNLLQESETHFSSDTDFEDIEGKNQKQGKGKTCKKGKKGPAEKGKGGNGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MIAAPEIPTDFNLLQESETHFSSDTDFEDIEGKNQKQGKGKTCKKGKKGPAEKGKGGNGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 GKPPSGPNRMNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GKPPSGPNRMNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 FIQCSGCKGVVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FIQCSGCKGVVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 VLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 MDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 IAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKEL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 NSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 HRPVAVAAGEFLYKKLFSRRDPEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HRPVAVAAGEFLYKKLFSRRDPEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 VDSMWDCATELLKDWECMNSLLLEEPLSGEEALTDRQESALIEIMLCTIRQAAECHPPVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VDSMWDCATELLKDWECMNSLLLEEPLSGEEALTDRQESALIEIMLCTIRQAAECHPPVG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 RGTGKRVLTAKEKKTQLDDRTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RGTGKRVLTAKEKKTQLDDRTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIY
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB6 TTGRLEKHLDALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTGRLEKHLDALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDE
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB6 LADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGI
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB6 ENGDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENGDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVN
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB6 TTVKEQAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTVKEQAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDD
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB6 NNSADGQQEDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NNSADGQQEDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDII
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB6 KETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFG
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB6 LDQLKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LDQLKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYV
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB6 YLEKFMTFQMSLRREDVWLPLMSYRNSLLAGGDDDTMSVISGISSRGSTVRSKKSKPSTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YLEKFMTFQMSLRREDVWLPLMSYRNSLLAGGDDDTMSVISGISSRGSTVRSKKSKPSTG
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KB6 KRKVVEGMQLSLTEESSSSDSMWLSREQTLHTPVMMQTPQLTSTIMREPKRLRPEDSFMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRKVVEGMQLSLTEESSSSDSMWLSREQTLHTPVMMQTPQLTSTIMREPKRLRPEDSFMS
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KB6 VYPMQTEHHQTPLDYNRRGTSLMEDDEEPIVEDVMMSSEGRIEDLNEGMDFDTMDIDLPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VYPMQTEHHQTPLDYNRRGTSLMEDDEEPIVEDVMMSSEGRIEDLNEGMDFDTMDIDLPP
1150 1160 1170 1180 1190 1200
1210 1220 1230
pF1KB6 SKNRRERTELKPDFFDPASIMDESVLGVSMF
:::::::::::::::::::::::::::::::
NP_001 SKNRRERTELKPDFFDPASIMDESVLGVSMF
1210 1220 1230
>>NP_001036216 (OMIM: 300826) cohesin subunit SA-2 isofo (1231 aa)
initn: 8096 init1: 8096 opt: 8096 Z-score: 8151.2 bits: 1520.3 E(85289): 0
Smith-Waterman score: 8096; 100.0% identity (100.0% similar) in 1231 aa overlap (1-1231:1-1231)
10 20 30 40 50 60
pF1KB6 MIAAPEIPTDFNLLQESETHFSSDTDFEDIEGKNQKQGKGKTCKKGKKGPAEKGKGGNGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MIAAPEIPTDFNLLQESETHFSSDTDFEDIEGKNQKQGKGKTCKKGKKGPAEKGKGGNGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 GKPPSGPNRMNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GKPPSGPNRMNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 FIQCSGCKGVVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FIQCSGCKGVVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 VLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 MDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 IAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKEL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 NSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 HRPVAVAAGEFLYKKLFSRRDPEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HRPVAVAAGEFLYKKLFSRRDPEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 VDSMWDCATELLKDWECMNSLLLEEPLSGEEALTDRQESALIEIMLCTIRQAAECHPPVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VDSMWDCATELLKDWECMNSLLLEEPLSGEEALTDRQESALIEIMLCTIRQAAECHPPVG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 RGTGKRVLTAKEKKTQLDDRTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RGTGKRVLTAKEKKTQLDDRTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIY
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB6 TTGRLEKHLDALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTGRLEKHLDALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDE
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB6 LADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGI
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB6 ENGDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENGDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVN
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB6 TTVKEQAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTVKEQAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDD
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB6 NNSADGQQEDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NNSADGQQEDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDII
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB6 KETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFG
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB6 LDQLKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LDQLKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYV
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB6 YLEKFMTFQMSLRREDVWLPLMSYRNSLLAGGDDDTMSVISGISSRGSTVRSKKSKPSTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YLEKFMTFQMSLRREDVWLPLMSYRNSLLAGGDDDTMSVISGISSRGSTVRSKKSKPSTG
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KB6 KRKVVEGMQLSLTEESSSSDSMWLSREQTLHTPVMMQTPQLTSTIMREPKRLRPEDSFMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRKVVEGMQLSLTEESSSSDSMWLSREQTLHTPVMMQTPQLTSTIMREPKRLRPEDSFMS
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KB6 VYPMQTEHHQTPLDYNRRGTSLMEDDEEPIVEDVMMSSEGRIEDLNEGMDFDTMDIDLPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VYPMQTEHHQTPLDYNRRGTSLMEDDEEPIVEDVMMSSEGRIEDLNEGMDFDTMDIDLPP
1150 1160 1170 1180 1190 1200
1210 1220 1230
pF1KB6 SKNRRERTELKPDFFDPASIMDESVLGVSMF
:::::::::::::::::::::::::::::::
NP_001 SKNRRERTELKPDFFDPASIMDESVLGVSMF
1210 1220 1230
>>XP_005262415 (OMIM: 300826) PREDICTED: cohesin subunit (1268 aa)
initn: 8126 init1: 7601 opt: 7601 Z-score: 7652.5 bits: 1428.1 E(85289): 0
Smith-Waterman score: 7979; 97.1% identity (97.1% similar) in 1263 aa overlap (1-1226:1-1263)
10 20 30 40 50 60
pF1KB6 MIAAPEIPTDFNLLQESETHFSSDTDFEDIEGKNQKQGKGKTCKKGKKGPAEKGKGGNGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MIAAPEIPTDFNLLQESETHFSSDTDFEDIEGKNQKQGKGKTCKKGKKGPAEKGKGGNGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 GKPPSGPNRMNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GKPPSGPNRMNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 FIQCSGCKGVVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FIQCSGCKGVVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 VLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 MDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 IAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKEL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 NSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 HRPVAVAAGEFLYKKLFSRRDPEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HRPVAVAAGEFLYKKLFSRRDPEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 VDSMWDCATELLKDWECMNSLLLEEPLSGEEALTDRQESALIEIMLCTIRQAAECHPPVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VDSMWDCATELLKDWECMNSLLLEEPLSGEEALTDRQESALIEIMLCTIRQAAECHPPVG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 RGTGKRVLTAKEKKTQLDDRTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RGTGKRVLTAKEKKTQLDDRTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIY
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB6 TTGRLEKHLDALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TTGRLEKHLDALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDE
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB6 LADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGI
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB6 ENGDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ENGDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVN
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB6 TTVKEQAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TTVKEQAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDD
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB6 NNSADGQQEDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NNSADGQQEDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDII
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB6 KETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFG
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB6 LDQLKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LDQLKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYV
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB6 YLEKFMTFQMSLRREDVWLPLMSYRNSLLAGGDDDTMSVISGISSRGSTVRSKKSKPSTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YLEKFMTFQMSLRREDVWLPLMSYRNSLLAGGDDDTMSVISGISSRGSTVRSKKSKPSTG
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KB6 KRKVVEGMQLSLTEESSSSDSMWLSREQTLHTPVMMQTPQLTSTIMREPKRLRPEDSFMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KRKVVEGMQLSLTEESSSSDSMWLSREQTLHTPVMMQTPQLTSTIMREPKRLRPEDSFMS
1090 1100 1110 1120 1130 1140
1150 1160
pF1KB6 VYPMQTEHHQTPLDYN-------------------------------------RRGTSLM
:::::::::::::::: :::::::
XP_005 VYPMQTEHHQTPLDYNTQVTWMLAQRQQEEARQQQERAAMSYVKLRTNLQHAIRRGTSLM
1150 1160 1170 1180 1190 1200
1170 1180 1190 1200 1210 1220
pF1KB6 EDDEEPIVEDVMMSSEGRIEDLNEGMDFDTMDIDLPPSKNRRERTELKPDFFDPASIMDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EDDEEPIVEDVMMSSEGRIEDLNEGMDFDTMDIDLPPSKNRRERTELKPDFFDPASIMDE
1210 1220 1230 1240 1250 1260
1230
pF1KB6 SVLGVSMF
:::
XP_005 SVLGVSMF
>>NP_001036215 (OMIM: 300826) cohesin subunit SA-2 isofo (1268 aa)
initn: 8126 init1: 7601 opt: 7601 Z-score: 7652.5 bits: 1428.1 E(85289): 0
Smith-Waterman score: 7979; 97.1% identity (97.1% similar) in 1263 aa overlap (1-1226:1-1263)
10 20 30 40 50 60
pF1KB6 MIAAPEIPTDFNLLQESETHFSSDTDFEDIEGKNQKQGKGKTCKKGKKGPAEKGKGGNGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MIAAPEIPTDFNLLQESETHFSSDTDFEDIEGKNQKQGKGKTCKKGKKGPAEKGKGGNGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 GKPPSGPNRMNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GKPPSGPNRMNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 FIQCSGCKGVVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FIQCSGCKGVVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 VLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 MDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 IAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKEL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 NSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 HRPVAVAAGEFLYKKLFSRRDPEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HRPVAVAAGEFLYKKLFSRRDPEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 VDSMWDCATELLKDWECMNSLLLEEPLSGEEALTDRQESALIEIMLCTIRQAAECHPPVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VDSMWDCATELLKDWECMNSLLLEEPLSGEEALTDRQESALIEIMLCTIRQAAECHPPVG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 RGTGKRVLTAKEKKTQLDDRTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RGTGKRVLTAKEKKTQLDDRTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIY
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB6 TTGRLEKHLDALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTGRLEKHLDALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDE
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB6 LADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGI
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB6 ENGDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENGDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVN
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB6 TTVKEQAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTVKEQAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDD
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB6 NNSADGQQEDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NNSADGQQEDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDII
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB6 KETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFG
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB6 LDQLKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LDQLKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYV
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB6 YLEKFMTFQMSLRREDVWLPLMSYRNSLLAGGDDDTMSVISGISSRGSTVRSKKSKPSTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YLEKFMTFQMSLRREDVWLPLMSYRNSLLAGGDDDTMSVISGISSRGSTVRSKKSKPSTG
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KB6 KRKVVEGMQLSLTEESSSSDSMWLSREQTLHTPVMMQTPQLTSTIMREPKRLRPEDSFMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRKVVEGMQLSLTEESSSSDSMWLSREQTLHTPVMMQTPQLTSTIMREPKRLRPEDSFMS
1090 1100 1110 1120 1130 1140
1150 1160
pF1KB6 VYPMQTEHHQTPLDYN-------------------------------------RRGTSLM
:::::::::::::::: :::::::
NP_001 VYPMQTEHHQTPLDYNTQVTWMLAQRQQEEARQQQERAAMSYVKLRTNLQHAIRRGTSLM
1150 1160 1170 1180 1190 1200
1170 1180 1190 1200 1210 1220
pF1KB6 EDDEEPIVEDVMMSSEGRIEDLNEGMDFDTMDIDLPPSKNRRERTELKPDFFDPASIMDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EDDEEPIVEDVMMSSEGRIEDLNEGMDFDTMDIDLPPSKNRRERTELKPDFFDPASIMDE
1210 1220 1230 1240 1250 1260
1230
pF1KB6 SVLGVSMF
:::
NP_001 SVLGVSMF
>>XP_011529555 (OMIM: 300826) PREDICTED: cohesin subunit (1268 aa)
initn: 8126 init1: 7601 opt: 7601 Z-score: 7652.5 bits: 1428.1 E(85289): 0
Smith-Waterman score: 7979; 97.1% identity (97.1% similar) in 1263 aa overlap (1-1226:1-1263)
10 20 30 40 50 60
pF1KB6 MIAAPEIPTDFNLLQESETHFSSDTDFEDIEGKNQKQGKGKTCKKGKKGPAEKGKGGNGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MIAAPEIPTDFNLLQESETHFSSDTDFEDIEGKNQKQGKGKTCKKGKKGPAEKGKGGNGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 GKPPSGPNRMNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GKPPSGPNRMNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 FIQCSGCKGVVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FIQCSGCKGVVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 VLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 MDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 IAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKEL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 NSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 HRPVAVAAGEFLYKKLFSRRDPEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HRPVAVAAGEFLYKKLFSRRDPEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 VDSMWDCATELLKDWECMNSLLLEEPLSGEEALTDRQESALIEIMLCTIRQAAECHPPVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VDSMWDCATELLKDWECMNSLLLEEPLSGEEALTDRQESALIEIMLCTIRQAAECHPPVG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 RGTGKRVLTAKEKKTQLDDRTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RGTGKRVLTAKEKKTQLDDRTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIY
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB6 TTGRLEKHLDALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TTGRLEKHLDALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDE
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB6 LADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGI
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB6 ENGDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ENGDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVN
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB6 TTVKEQAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TTVKEQAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDD
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB6 NNSADGQQEDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NNSADGQQEDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDII
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB6 KETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFG
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB6 LDQLKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LDQLKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYV
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB6 YLEKFMTFQMSLRREDVWLPLMSYRNSLLAGGDDDTMSVISGISSRGSTVRSKKSKPSTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YLEKFMTFQMSLRREDVWLPLMSYRNSLLAGGDDDTMSVISGISSRGSTVRSKKSKPSTG
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KB6 KRKVVEGMQLSLTEESSSSDSMWLSREQTLHTPVMMQTPQLTSTIMREPKRLRPEDSFMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KRKVVEGMQLSLTEESSSSDSMWLSREQTLHTPVMMQTPQLTSTIMREPKRLRPEDSFMS
1090 1100 1110 1120 1130 1140
1150 1160
pF1KB6 VYPMQTEHHQTPLDYN-------------------------------------RRGTSLM
:::::::::::::::: :::::::
XP_011 VYPMQTEHHQTPLDYNTQVTWMLAQRQQEEARQQQERAAMSYVKLRTNLQHAIRRGTSLM
1150 1160 1170 1180 1190 1200
1170 1180 1190 1200 1210 1220
pF1KB6 EDDEEPIVEDVMMSSEGRIEDLNEGMDFDTMDIDLPPSKNRRERTELKPDFFDPASIMDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EDDEEPIVEDVMMSSEGRIEDLNEGMDFDTMDIDLPPSKNRRERTELKPDFFDPASIMDE
1210 1220 1230 1240 1250 1260
1230
pF1KB6 SVLGVSMF
:::
XP_011 SVLGVSMF
1231 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 20:51:46 2016 done: Sat Nov 5 20:51:48 2016
Total Scan time: 15.560 Total Display time: 0.620
Function used was FASTA [36.3.4 Apr, 2011]