Result of FASTA (ccds) for
pF1KB6013
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6013, 576 aa
1>>>pF1KB6013 576 - 576 aa - 576 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.1785+/-0.000965; mu= 16.6472+/- 0.058
mean_var=174.0559+/-33.947, 0's: 0 Z-trim(111.9): 91 B-trim: 3 in 1/52
Lambda= 0.097214
statistics sampled from 12672 (12775) to 12672 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.74), E-opt: 0.2 (0.392), width: 16
Scan time: 2.990
The best scores are: opt bits E(32554)
CCDS11575.1 WFIKKN2 gene_id:124857|Hs108|chr17 ( 576) 4123 590.9 1.4e-168
CCDS82159.1 WFIKKN2 gene_id:124857|Hs108|chr17 ( 483) 3427 493.2 3e-139
CCDS10414.1 WFIKKN1 gene_id:117166|Hs108|chr16 ( 548) 1582 234.5 2.6e-61
>>CCDS11575.1 WFIKKN2 gene_id:124857|Hs108|chr17 (576 aa)
initn: 4123 init1: 4123 opt: 4123 Z-score: 3140.0 bits: 590.9 E(32554): 1.4e-168
Smith-Waterman score: 4123; 100.0% identity (100.0% similar) in 576 aa overlap (1-576:1-576)
10 20 30 40 50 60
pF1KB6 MWAPRCRRFWSRWEQVAALLLLLLLLGVPPRSLALPPIRYSHAGICPNDMNPNLWVDAQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MWAPRCRRFWSRWEQVAALLLLLLLLGVPPRSLALPPIRYSHAGICPNDMNPNLWVDAQS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 TCRRECETDQECETYEKCCPNVCGTKSCVAARYMDVKGKKGPVGMPKEATCDHFMCLQQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TCRRECETDQECETYEKCCPNVCGTKSCVAARYMDVKGKKGPVGMPKEATCDHFMCLQQG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SECDIWDGQPVCKCKDRCEKEPSFTCASDGLTYYNRCYMDAEACSKGITLAVVTCRYHFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SECDIWDGQPVCKCKDRCEKEPSFTCASDGLTYYNRCYMDAEACSKGITLAVVTCRYHFT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 WPNTSPPPPETTMHPTTASPETPELDMAAPALLNNPVHQSVTMGETVSFLCDVVGRPRPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 WPNTSPPPPETTMHPTTASPETPELDMAAPALLNNPVHQSVTMGETVSFLCDVVGRPRPE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ITWEKQLEDRENVVMRPNHVRGNVVVTNIAQLVIYNAQLQDAGIYTCTARNVAGVLRADF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ITWEKQLEDRENVVMRPNHVRGNVVVTNIAQLVIYNAQLQDAGIYTCTARNVAGVLRADF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 PLSVVRGHQAAATSESSPNGTAFPAAECLKPPDSEDCGEEQTRWHFDAQANNCLTFTFGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 PLSVVRGHQAAATSESSPNGTAFPAAECLKPPDSEDCGEEQTRWHFDAQANNCLTFTFGH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 CHRNLNHFETYEACMLACMSGPLAACSLPALQGPCKAYAPRWAYNSQTGQCQSFVYGGCE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 CHRNLNHFETYEACMLACMSGPLAACSLPALQGPCKAYAPRWAYNSQTGQCQSFVYGGCE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 GNGNNFESREACEESCPFPRGNQRCRACKPRQKLVTSFCRSDFVILGRVSELTEEPDSGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 GNGNNFESREACEESCPFPRGNQRCRACKPRQKLVTSFCRSDFVILGRVSELTEEPDSGR
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 ALVTVDEVLKDEKMGLKFLGQEPLEVTLLHVDWACPCPNVTVSEMPLIIMGEVDGGMAML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ALVTVDEVLKDEKMGLKFLGQEPLEVTLLHVDWACPCPNVTVSEMPLIIMGEVDGGMAML
490 500 510 520 530 540
550 560 570
pF1KB6 RPDSFVGASSARRVRKLREVMHKKTCDVLKEFLGLH
::::::::::::::::::::::::::::::::::::
CCDS11 RPDSFVGASSARRVRKLREVMHKKTCDVLKEFLGLH
550 560 570
>>CCDS82159.1 WFIKKN2 gene_id:124857|Hs108|chr17 (483 aa)
initn: 3427 init1: 3427 opt: 3427 Z-score: 2613.3 bits: 493.2 E(32554): 3e-139
Smith-Waterman score: 3427; 100.0% identity (100.0% similar) in 483 aa overlap (94-576:1-483)
70 80 90 100 110 120
pF1KB6 RECETDQECETYEKCCPNVCGTKSCVAARYMDVKGKKGPVGMPKEATCDHFMCLQQGSEC
::::::::::::::::::::::::::::::
CCDS82 MDVKGKKGPVGMPKEATCDHFMCLQQGSEC
10 20 30
130 140 150 160 170 180
pF1KB6 DIWDGQPVCKCKDRCEKEPSFTCASDGLTYYNRCYMDAEACSKGITLAVVTCRYHFTWPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 DIWDGQPVCKCKDRCEKEPSFTCASDGLTYYNRCYMDAEACSKGITLAVVTCRYHFTWPN
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB6 TSPPPPETTMHPTTASPETPELDMAAPALLNNPVHQSVTMGETVSFLCDVVGRPRPEITW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 TSPPPPETTMHPTTASPETPELDMAAPALLNNPVHQSVTMGETVSFLCDVVGRPRPEITW
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB6 EKQLEDRENVVMRPNHVRGNVVVTNIAQLVIYNAQLQDAGIYTCTARNVAGVLRADFPLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 EKQLEDRENVVMRPNHVRGNVVVTNIAQLVIYNAQLQDAGIYTCTARNVAGVLRADFPLS
160 170 180 190 200 210
310 320 330 340 350 360
pF1KB6 VVRGHQAAATSESSPNGTAFPAAECLKPPDSEDCGEEQTRWHFDAQANNCLTFTFGHCHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 VVRGHQAAATSESSPNGTAFPAAECLKPPDSEDCGEEQTRWHFDAQANNCLTFTFGHCHR
220 230 240 250 260 270
370 380 390 400 410 420
pF1KB6 NLNHFETYEACMLACMSGPLAACSLPALQGPCKAYAPRWAYNSQTGQCQSFVYGGCEGNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 NLNHFETYEACMLACMSGPLAACSLPALQGPCKAYAPRWAYNSQTGQCQSFVYGGCEGNG
280 290 300 310 320 330
430 440 450 460 470 480
pF1KB6 NNFESREACEESCPFPRGNQRCRACKPRQKLVTSFCRSDFVILGRVSELTEEPDSGRALV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 NNFESREACEESCPFPRGNQRCRACKPRQKLVTSFCRSDFVILGRVSELTEEPDSGRALV
340 350 360 370 380 390
490 500 510 520 530 540
pF1KB6 TVDEVLKDEKMGLKFLGQEPLEVTLLHVDWACPCPNVTVSEMPLIIMGEVDGGMAMLRPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 TVDEVLKDEKMGLKFLGQEPLEVTLLHVDWACPCPNVTVSEMPLIIMGEVDGGMAMLRPD
400 410 420 430 440 450
550 560 570
pF1KB6 SFVGASSARRVRKLREVMHKKTCDVLKEFLGLH
:::::::::::::::::::::::::::::::::
CCDS82 SFVGASSARRVRKLREVMHKKTCDVLKEFLGLH
460 470 480
>>CCDS10414.1 WFIKKN1 gene_id:117166|Hs108|chr16 (548 aa)
initn: 1756 init1: 535 opt: 1582 Z-score: 1214.3 bits: 234.5 E(32554): 2.6e-61
Smith-Waterman score: 2193; 56.1% identity (77.0% similar) in 560 aa overlap (19-572:7-546)
10 20 30 40 50 60
pF1KB6 MWAPRCRRFWSRWEQVAALLLLLLLLGVPPRSLALPPIRYSHAGICPNDMNPNLWVDAQS
:: ::::: . . :: . :: :.:::...:::::::::
CCDS10 MPALRPLLPLLLLLRLTSGAGLLPGLG-SHPGVCPNQLSPNLWVDAQS
10 20 30 40
70 80 90 100 110 120
pF1KB6 TCRRECETDQECETYEKCCPNVCGTKSCVAARYMDVKGKKGPVGMPKEATCDHFMCLQQG
::.::: ::.: . :::: :::: .::::::. : .:.. :.:. :.: :::
CCDS10 TCERECSRDQDCAAAEKCCINVCGLHSCVAARF---PG--SPAAPTTAASCEGFVCPQQG
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB6 SECDIWDGQPVCKCKDRCEKEPSFTCASDGLTYYNRCYMDAEACSKGITLAVVTCRYHFT
:.::::::::::.:.::::::::::::::::::::::::::::: .:. : .: :.. ..
CCDS10 SDCDIWDGQPVCRCRDRCEKEPSFTCASDGLTYYNRCYMDAEACLRGLHLHIVPCKHVLS
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB6 WPNTSPPPPETTMHPTTASPETPELDMAAPALLNNPVHQSVTMGETVSFLCDVVGRPRPE
:: .:: ::::: .:: .. .: ::: ..: :.: .: :.:. ::: ::: :
CCDS10 WPPSSPGPPETTARPTPGAAPVP------PALYSSPSPQAVQVGGTASLHCDVSGRPPPA
170 180 190 200 210
250 260 270 280 290 300
pF1KB6 ITWEKQLEDRENVVMRPNHVRGNVVVTNIAQLVIYNAQLQDAGIYTCTARNVAGVLRADF
.::::: ..:::..:::... ::::::.:.:::.:::. .:::.:::::::.::.:::::
CCDS10 VTWEKQSHQRENLIMRPDQMYGNVVVTSIGQLVLYNARPEDAGLYTCTARNAAGLLRADF
220 230 240 250 260 270
310 320 330 340 350
pF1KB6 PLSVVRGHQAAATSESSPNGTAFPAAECLKPPDSEDC-GEEQTR---WHFDAQANNCLTF
:::::. . : .. : : :: ::: :: . : : . . ::.: : ..:.::
CCDS10 PLSVVQREPARDAAPSIPA----PA-ECL--PDVQACTGPTSPHLVLWHYDPQRGGCMTF
280 290 300 310 320
360 370 380 390 400 410
pF1KB6 TFGHCHRNLNHFETYEACMLACMSGPLAACSLPALQGPCKAYAPRWAYNSQTGQCQSFVY
: :::::::. :: :: :: :::.::::... :::::. ::. :::
CCDS10 PARGCDGAARGFETYEACQQACARGPGDACVLPAVQGPCRGWEPRWAYSPLLQQCHPFVY
330 340 350 360 370 380
420 430 440 450 460 470
pF1KB6 GGCEGNGNNFESREACEESCPFPRGNQRCRACKPRQKLVTSFCRSDFVILGRVSELTEEP
::::::::::.:::.::..:: :: . ::::. :.::. :.:::::.:.::..:. :::
CCDS10 GGCEGNGNNFHSRESCEDACPVPR-TPPCRACRLRSKLALSLCRSDFAIVGRLTEVLEEP
390 400 410 420 430 440
480 490 500 510 520 530
pF1KB6 DS--GRALVTVDEVLKDEKMGLKFLGQEPLEVTLLHVDWACPCPNVTVSEMPLIIMGEVD
.. : : :....::::.:::::::: . ::::: .::::::::.:... ::.:::::
CCDS10 EAAGGIARVALEDVLKDDKMGLKFLGTKYLEVTLSGMDWACPCPNMTAGDGPLVIMGEVR
450 460 470 480 490 500
540 550 560 570
pF1KB6 GGMAMLRPDSFVGASSARRVRKLREVMHKKTCDVLKEFLGLH
:.:.: :.: :.: .::.:. :...:..:..:..:
CCDS10 DGVAVLDAGSYVRAASEKRVKKILELLEKQACELLNRFQD
510 520 530 540
576 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 00:03:27 2016 done: Sat Nov 5 00:03:28 2016
Total Scan time: 2.990 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]