Result of FASTA (omim) for
pF1KB6116
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6116, 582 aa
1>>>pF1KB6116 582 - 582 aa - 582 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6287+/-0.000374; mu= 17.1688+/- 0.023
mean_var=74.5428+/-15.218, 0's: 0 Z-trim(114.4): 88 B-trim: 975 in 2/52
Lambda= 0.148550
statistics sampled from 24126 (24219) to 24126 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.652), E-opt: 0.2 (0.284), width: 16
Scan time: 8.950
The best scores are: opt bits E(85289)
NP_068758 (OMIM: 259450,607063,610968) peptidyl-pr ( 582) 3999 866.7 0
XP_011523401 (OMIM: 259450,607063,610968) PREDICTE ( 601) 2892 629.5 9.8e-180
NP_009201 (OMIM: 616257) peptidyl-prolyl cis-trans ( 570) 2331 509.2 1.5e-143
NP_001271270 (OMIM: 616257) peptidyl-prolyl cis-tr ( 623) 2119 463.8 7.4e-130
XP_011523402 (OMIM: 259450,607063,610968) PREDICTE ( 510) 2006 439.5 1.2e-122
XP_011513417 (OMIM: 616257) PREDICTED: peptidyl-pr ( 359) 1537 338.9 1.7e-92
NP_001271272 (OMIM: 616257) peptidyl-prolyl cis-tr ( 338) 1357 300.4 6.5e-81
NP_476433 (OMIM: 186946) peptidyl-prolyl cis-trans ( 142) 335 81.1 2.7e-15
NP_004461 (OMIM: 186946) peptidyl-prolyl cis-trans ( 142) 335 81.1 2.7e-15
NP_001128680 (OMIM: 186946) peptidyl-prolyl cis-tr ( 142) 335 81.1 2.7e-15
XP_005273905 (OMIM: 186946) PREDICTED: peptidyl-pr ( 142) 335 81.1 2.7e-15
NP_001128684 (OMIM: 607062) peptidyl-prolyl cis-tr ( 221) 320 78.0 3.6e-14
NP_057678 (OMIM: 610571) peptidyl-prolyl cis-trans ( 201) 312 76.3 1.1e-13
NP_851939 (OMIM: 607062) peptidyl-prolyl cis-trans ( 222) 312 76.3 1.2e-13
NP_060416 (OMIM: 614505,614557) peptidyl-prolyl ci ( 211) 308 75.4 2.1e-13
NP_001137254 (OMIM: 610571) peptidyl-prolyl cis-tr ( 146) 297 73.0 7.8e-13
NP_001139247 (OMIM: 602623,608516) peptidyl-prolyl ( 457) 297 73.3 2e-12
NP_001139248 (OMIM: 602623,608516) peptidyl-prolyl ( 457) 297 73.3 2e-12
NP_004108 (OMIM: 602623,608516) peptidyl-prolyl ci ( 457) 297 73.3 2e-12
NP_463460 (OMIM: 186945) peptidyl-prolyl cis-trans ( 108) 260 65.0 1.5e-10
NP_000792 (OMIM: 186945) peptidyl-prolyl cis-trans ( 108) 260 65.0 1.5e-10
NP_002005 (OMIM: 600611) peptidyl-prolyl cis-trans ( 459) 268 67.0 1.5e-10
XP_005246695 (OMIM: 607062) PREDICTED: peptidyl-pr ( 181) 261 65.3 2e-10
XP_011519231 (OMIM: 600611) PREDICTED: peptidyl-pr ( 414) 263 65.9 2.9e-10
NP_004107 (OMIM: 600620) peptidyl-prolyl cis-trans ( 108) 246 62.0 1.2e-09
NP_001139249 (OMIM: 602623,608516) peptidyl-prolyl ( 268) 241 61.1 5.3e-09
XP_016859085 (OMIM: 600620) PREDICTED: peptidyl-pr ( 79) 217 55.7 6.7e-08
XP_016859082 (OMIM: 600620) PREDICTED: peptidyl-pr ( 79) 217 55.7 6.7e-08
XP_016859083 (OMIM: 600620) PREDICTED: peptidyl-pr ( 79) 217 55.7 6.7e-08
NP_001309893 (OMIM: 600620) peptidyl-prolyl cis-tr ( 79) 217 55.7 6.7e-08
XP_016859084 (OMIM: 600620) PREDICTED: peptidyl-pr ( 79) 217 55.7 6.7e-08
NP_001309892 (OMIM: 600620) peptidyl-prolyl cis-tr ( 79) 217 55.7 6.7e-08
XP_011534867 (OMIM: 186947) PREDICTED: peptidyl-pr ( 191) 215 55.5 1.9e-07
NP_002004 (OMIM: 186947) peptidyl-prolyl cis-trans ( 224) 215 55.5 2.2e-07
XP_016876582 (OMIM: 186947) PREDICTED: peptidyl-pr ( 196) 176 47.1 6.4e-05
XP_016876581 (OMIM: 186947) PREDICTED: peptidyl-pr ( 229) 176 47.2 7.2e-05
XP_016868231 (OMIM: 604839) PREDICTED: inactive pe ( 266) 175 47.0 9.5e-05
XP_006716216 (OMIM: 604839) PREDICTED: inactive pe ( 282) 175 47.0 0.0001
XP_016868230 (OMIM: 604839) PREDICTED: inactive pe ( 317) 175 47.0 0.00011
NP_001128683 (OMIM: 604839) inactive peptidyl-prol ( 322) 175 47.0 0.00011
NP_003593 (OMIM: 604839) inactive peptidyl-prolyl ( 327) 175 47.0 0.00011
NP_001137253 (OMIM: 610571) peptidyl-prolyl cis-tr ( 99) 141 39.5 0.0065
>>NP_068758 (OMIM: 259450,607063,610968) peptidyl-prolyl (582 aa)
initn: 3999 init1: 3999 opt: 3999 Z-score: 4630.2 bits: 866.7 E(85289): 0
Smith-Waterman score: 3999; 100.0% identity (100.0% similar) in 582 aa overlap (1-582:1-582)
10 20 30 40 50 60
pF1KB6 MFPAGPPSHSLLRLPLLQLLLLVVQAVGRGLGRASPAGGPLEDVVIERYHIPRACPREVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 MFPAGPPSHSLLRLPLLQLLLLVVQAVGRGLGRASPAGGPLEDVVIERYHIPRACPREVQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 MGDFVRYHYNGTFEDGKKFDSSYDRNTLVAIVVGVGRLITGMDRGLMGMCVNERRRLIVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 MGDFVRYHYNGTFEDGKKFDSSYDRNTLVAIVVGVGRLITGMDRGLMGMCVNERRRLIVP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PHLGYGSIGLAGLIPPDATLYFDVVLLDVWNKEDTVQVSTLLRPPHCPRMVQDGDFVRYH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 PHLGYGSIGLAGLIPPDATLYFDVVLLDVWNKEDTVQVSTLLRPPHCPRMVQDGDFVRYH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 YNGTLLDGTSFDTSYSKGGTYDTYVGSGWLIKGMDQGLLGMCPGERRKIIIPPFLAYGEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 YNGTLLDGTSFDTSYSKGGTYDTYVGSGWLIKGMDQGLLGMCPGERRKIIIPPFLAYGEK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 GYGTVIPPQASLVFHVLLIDVHNPKDAVQLETLELPPGCVRRAGAGDFMRYHYNGSLMDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 GYGTVIPPQASLVFHVLLIDVHNPKDAVQLETLELPPGCVRRAGAGDFMRYHYNGSLMDG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 TLFDSSYSRNHTYNTYIGQGYIIPGMDQGLQGACMGERRRITIPPHLAYGENGTGDKIPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 TLFDSSYSRNHTYNTYIGQGYIIPGMDQGLQGACMGERRRITIPPHLAYGENGTGDKIPG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 SAVLIFNVHVIDFHNPADVVEIRTLSRPSETCNETTKLGDFVRYHYNCSLLDGTQLFTSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 SAVLIFNVHVIDFHNPADVVEIRTLSRPSETCNETTKLGDFVRYHYNCSLLDGTQLFTSH
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 DYGAPQEATLGANKVIEGLDTGLQGMCVGERRQLIVPPHLAHGESGARGVPGSAVLLFEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 DYGAPQEATLGANKVIEGLDTGLQGMCVGERRQLIVPPHLAHGESGARGVPGSAVLLFEV
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 ELVSREDGLPTGYLFVWHKDPPANLFEDMDLNKDGEVPPEEFSTFIKAQVSEGKGRLMPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 ELVSREDGLPTGYLFVWHKDPPANLFEDMDLNKDGEVPPEEFSTFIKAQVSEGKGRLMPG
490 500 510 520 530 540
550 560 570 580
pF1KB6 QDPEKTIGDMFQNQDRNQDGKITVDELKLKSDEDEERVHEEL
::::::::::::::::::::::::::::::::::::::::::
NP_068 QDPEKTIGDMFQNQDRNQDGKITVDELKLKSDEDEERVHEEL
550 560 570 580
>>XP_011523401 (OMIM: 259450,607063,610968) PREDICTED: p (601 aa)
initn: 4883 init1: 2892 opt: 2892 Z-score: 3347.8 bits: 629.5 E(85289): 9.8e-180
Smith-Waterman score: 3951; 96.8% identity (96.8% similar) in 601 aa overlap (1-582:1-601)
10 20 30 40 50 60
pF1KB6 MFPAGPPSHSLLRLPLLQLLLLVVQAVGRGLGRASPAGGPLEDVVIERYHIPRACPREVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MFPAGPPSHSLLRLPLLQLLLLVVQAVGRGLGRASPAGGPLEDVVIERYHIPRACPREVQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 MGDFVRYHYNGTFEDGKKFDSSYDRNTLVAIVVGVGRLITGMDRGLMGMCVNERRRLIVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MGDFVRYHYNGTFEDGKKFDSSYDRNTLVAIVVGVGRLITGMDRGLMGMCVNERRRLIVP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PHLGYGSIGLAGLIPPDATLYFDVVLLDVWNKEDTVQVSTLLRPPHCPRMVQDGDFVRYH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PHLGYGSIGLAGLIPPDATLYFDVVLLDVWNKEDTVQVSTLLRPPHCPRMVQDGDFVRYH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 YNGTLLDGTSFDTSYSKGGTYDTYVGSGWLIKGMDQGLLGMCPGERRKIIIPPFLAYGEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YNGTLLDGTSFDTSYSKGGTYDTYVGSGWLIKGMDQGLLGMCPGERRKIIIPPFLAYGEK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 GYGTVIPPQASLVFHVLLIDVHNPKDAVQLETLELPPGCVRRAGAGDFMRYHYNGSLMDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GYGTVIPPQASLVFHVLLIDVHNPKDAVQLETLELPPGCVRRAGAGDFMRYHYNGSLMDG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 TLFDSSYSRNHTYNTYIGQGYIIPGMDQGLQGACMGERRRITIPPHLAYGENGTGDKIPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TLFDSSYSRNHTYNTYIGQGYIIPGMDQGLQGACMGERRRITIPPHLAYGENGTGDKIPG
310 320 330 340 350 360
370 380 390 400 410
pF1KB6 SAVLIFNVHVIDFHNPADVVEIRTLSRPSETCNETTKLGDFVRYHYNCSLLDGTQLFTS-
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SAVLIFNVHVIDFHNPADVVEIRTLSRPSETCNETTKLGDFVRYHYNCSLLDGTQLFTSG
370 380 390 400 410 420
420 430 440 450 460
pF1KB6 ------------------HDYGAPQEATLGANKVIEGLDTGLQGMCVGERRQLIVPPHLA
::::::::::::::::::::::::::::::::::::::::::
XP_011 ETDAGSHEPSRPHFRGQRHDYGAPQEATLGANKVIEGLDTGLQGMCVGERRQLIVPPHLA
430 440 450 460 470 480
470 480 490 500 510 520
pF1KB6 HGESGARGVPGSAVLLFEVELVSREDGLPTGYLFVWHKDPPANLFEDMDLNKDGEVPPEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HGESGARGVPGSAVLLFEVELVSREDGLPTGYLFVWHKDPPANLFEDMDLNKDGEVPPEE
490 500 510 520 530 540
530 540 550 560 570 580
pF1KB6 FSTFIKAQVSEGKGRLMPGQDPEKTIGDMFQNQDRNQDGKITVDELKLKSDEDEERVHEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FSTFIKAQVSEGKGRLMPGQDPEKTIGDMFQNQDRNQDGKITVDELKLKSDEDEERVHEE
550 560 570 580 590 600
pF1KB6 L
:
XP_011 L
>>NP_009201 (OMIM: 616257) peptidyl-prolyl cis-trans iso (570 aa)
initn: 2390 init1: 1502 opt: 2331 Z-score: 2698.4 bits: 509.2 E(85289): 1.5e-143
Smith-Waterman score: 2331; 58.0% identity (80.0% similar) in 571 aa overlap (15-582:12-570)
10 20 30 40 50
pF1KB6 MFPAGPPSHSLLRLPLLQLLLLVVQAVGRGLGRASPAGGPLED--VVIERYHIPRACPRE
::: ::: :. :.:.:..: : . ::: .: :::
NP_009 MAFRGWRPPPPPLLLLLLWVT-------GQAAPVAGLGSDAELQIERRFVPDECPRT
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 VQMGDFVRYHYNGTFEDGKKFDSSYDRNTLVAIVVGVGRLITGMDRGLMGMCVNERRRLI
:. :::::::: ::: ::.::::::::.. . :: :.::::::..:.:::::::: .
NP_009 VRSGDFVRYHYVGTFPDGQKFDSSYDRDSTFNVFVGKGQLITGMDQALVGMCVNERRFVK
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 VPPHLGYGSIGLAGLIPPDATLYFDVVLLDVWNKEDTVQVSTLLRPPHCPRMVQDGDFVR
.::.:.::. :..:.:::...:.:::.:.:.::.:: ::. : ..:: ::: .: .::::
NP_009 IPPKLAYGNEGVSGVIPPNSVLHFDVLLMDIWNSEDQVQIHTYFKPPSCPRTIQVSDFVR
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB6 YHYNGTLLDGTSFDTSYSKGGTYDTYVGSGWLIKGMDQGLLGMCPGERRKIIIPPFLAYG
::::::.:::: ::.:... ::::::: :::: :::.:::::: ::.: : ::::::::
NP_009 YHYNGTFLDGTLFDSSHNRMKTYDTYVGIGWLIPGMDKGLLGMCVGEKRIITIPPFLAYG
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB6 EKGYGTVIPPQASLVFHVLLIDVHNPKDAVQLETLELPPGCVRRAGAGDFMRYHYNGSLM
: : : :: :::::: : :.:.:::::....:. .: .: : . .:::.::::::.:.
NP_009 EDGDGKDIPGQASLVFDVALLDLHNPKDSISIENKVVPENCERISQSGDFLRYHYNGTLL
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB6 DGTLFDSSYSRNHTYNTYIGQGYIIPGMDQGLQGACMGERRRITIPPHLAYGENGTGDKI
::::::::::::.:..:::::::.:::::.:: :.:.::.:::..::::.:::.: :. :
NP_009 DGTLFDSSYSRNRTFDTYIGQGYVIPGMDEGLLGVCIGEKRRIVVPPHLGYGEEGRGN-I
300 310 320 330 340
360 370 380 390 400 410
pF1KB6 PGSAVLIFNVHVIDFHNPADVVEIRTLSRPSETCNETTKLGDFVRYHYNCSLLDGTQLFT
::::::.:..::::::::.: . : . .: . :. .: ::...:::: :::::: : .
NP_009 PGSAVLVFDIHVIDFHNPSDSISITSHYKPPD-CSVLSKKGDYLKYHYNASLLDGTLLDS
350 360 370 380 390 400
420 430 440 450 460 470
pF1KB6 SHDYGAPQEATLGANKVIEGLDTGLQGMCVGERRQLIVPPHLAHGESGARG-VPGSAVLL
. . : . .::...:. :.: ::. :::::.: .:.::::..::.:. : :::::::.
NP_009 TWNLGKTYNIVLGSGQVVLGMDMGLREMCVGEKRTVIIPPHLGYGEAGVDGEVPGSAVLV
410 420 430 440 450 460
480 490 500 510 520 530
pF1KB6 FEVELVSREDGLPTGYLFVWHKDPPANLFEDMDLNKDGEVPPEEFSTFIKAQVSEGKGRL
:..::. ::: ::.:.:. . ::::..: . .::: :::: .:.:::. :::.:
NP_009 FDIELLELVAGLPEGYMFIWNGEVSPNLFEEIDKDGNGEVLLEEFSEYIHAQVASGKGKL
470 480 490 500 510 520
540 550 560 570 580
pF1KB6 MPGQDPEKTIGDMFQNQDRNQDGKITVDELKLKSDEDEERVHEEL
:: : : . .:: ::::: :::.:..:.::: :.: :.::
NP_009 APGFDAELIVKNMFTNQDRNGDGKVTAEEFKLK---DQEAKHDEL
530 540 550 560 570
>>NP_001271270 (OMIM: 616257) peptidyl-prolyl cis-trans (623 aa)
initn: 2206 init1: 1318 opt: 2119 Z-score: 2452.3 bits: 463.8 E(85289): 7.4e-130
Smith-Waterman score: 2203; 53.4% identity (74.0% similar) in 607 aa overlap (32-582:22-623)
10 20 30 40 50
pF1KB6 FPAGPPSHSLLRLPLLQLLLLVVQAVGRGLGRASPAGGPLED--VVIERYHIPRACPREV
:.:.:..: : . ::: .: ::: :
NP_001 MAFRGWRPPPPPLLLLLLWVTGQAAPVAGLGSDAELQIERRFVPDECPRTV
10 20 30 40 50
60 70 80
pF1KB6 QMGDFVRYHYNGTFEDGKKFDS--------------------------------------
. :::::::: ::: ::.::::
NP_001 RSGDFVRYHYVGTFPDGQKFDSRYWDTAEDKADKSPCPQVRVGVNTSPSCRLKQKGVGIY
60 70 80 90 100 110
90 100 110 120
pF1KB6 ---------------SYDRNTLVAIVVGVGRLITGMDRGLMGMCVNERRRLIVPPHLGYG
::::.. . :: :.::::::..:.:::::::: . .::.:.::
NP_001 WKDLQFLVRVQNHGLSYDRDSTFNVFVGKGQLITGMDQALVGMCVNERRFVKIPPKLAYG
120 130 140 150 160 170
130 140 150 160 170 180
pF1KB6 SIGLAGLIPPDATLYFDVVLLDVWNKEDTVQVSTLLRPPHCPRMVQDGDFVRYHYNGTLL
. :..:.:::...:.:::.:.:.::.:: ::. : ..:: ::: .: .::::::::::.:
NP_001 NEGVSGVIPPNSVLHFDVLLMDIWNSEDQVQIHTYFKPPSCPRTIQVSDFVRYHYNGTFL
180 190 200 210 220 230
190 200 210 220 230 240
pF1KB6 DGTSFDTSYSKGGTYDTYVGSGWLIKGMDQGLLGMCPGERRKIIIPPFLAYGEKGYGTVI
::: ::.:... ::::::: :::: :::.:::::: ::.: : ::::::::: : : :
NP_001 DGTLFDSSHNRMKTYDTYVGIGWLIPGMDKGLLGMCVGEKRIITIPPFLAYGEDGDGKDI
240 250 260 270 280 290
250 260 270 280 290 300
pF1KB6 PPQASLVFHVLLIDVHNPKDAVQLETLELPPGCVRRAGAGDFMRYHYNGSLMDGTLFDSS
: :::::: : :.:.:::::....:. .: .: : . .:::.::::::.:.::::::::
NP_001 PGQASLVFDVALLDLHNPKDSISIENKVVPENCERISQSGDFLRYHYNGTLLDGTLFDSS
300 310 320 330 340 350
310 320 330 340 350 360
pF1KB6 YSRNHTYNTYIGQGYIIPGMDQGLQGACMGERRRITIPPHLAYGENGTGDKIPGSAVLIF
::::.:..:::::::.:::::.:: :.:.::.:::..::::.:::.: :. :::::::.:
NP_001 YSRNRTFDTYIGQGYVIPGMDEGLLGVCIGEKRRIVVPPHLGYGEEGRGN-IPGSAVLVF
360 370 380 390 400 410
370 380 390 400 410 420
pF1KB6 NVHVIDFHNPADVVEIRTLSRPSETCNETTKLGDFVRYHYNCSLLDGTQLFTSHDYGAPQ
..::::::::.: . : . .: . :. .: ::...:::: :::::: : .. . :
NP_001 DIHVIDFHNPSDSISITSHYKPPD-CSVLSKKGDYLKYHYNASLLDGTLLDSTWNLGKTY
420 430 440 450 460
430 440 450 460 470 480
pF1KB6 EATLGANKVIEGLDTGLQGMCVGERRQLIVPPHLAHGESGARG-VPGSAVLLFEVELVSR
. .::...:. :.: ::. :::::.: .:.::::..::.:. : :::::::.:..::.
NP_001 NIVLGSGQVVLGMDMGLREMCVGEKRTVIIPPHLGYGEAGVDGEVPGSAVLVFDIELLEL
470 480 490 500 510 520
490 500 510 520 530 540
pF1KB6 EDGLPTGYLFVWHKDPPANLFEDMDLNKDGEVPPEEFSTFIKAQVSEGKGRLMPGQDPEK
::: ::.:.:. . ::::..: . .::: :::: .:.:::. :::.: :: : :
NP_001 VAGLPEGYMFIWNGEVSPNLFEEIDKDGNGEVLLEEFSEYIHAQVASGKGKLAPGFDAEL
530 540 550 560 570 580
550 560 570 580
pF1KB6 TIGDMFQNQDRNQDGKITVDELKLKSDEDEERVHEEL
. .:: ::::: :::.:..:.::: :.: :.::
NP_001 IVKNMFTNQDRNGDGKVTAEEFKLK---DQEAKHDEL
590 600 610 620
>>XP_011523402 (OMIM: 259450,607063,610968) PREDICTED: p (510 aa)
initn: 3996 init1: 2005 opt: 2006 Z-score: 2322.7 bits: 439.5 E(85289): 1.2e-122
Smith-Waterman score: 3065; 95.4% identity (95.6% similar) in 475 aa overlap (127-582:36-510)
100 110 120 130 140 150
pF1KB6 RLITGMDRGLMGMCVNERRRLIVPPHLGYGSIGLAGLIPPDATLYFDVVLLDVWNKEDTV
:. ::::::::::::::::::::::::::
XP_011 GTTSPGPVPGKCRWGILCATTTTALLKMARSLIQAGLIPPDATLYFDVVLLDVWNKEDTV
10 20 30 40 50 60
160 170 180 190 200 210
pF1KB6 QVSTLLRPPHCPRMVQDGDFVRYHYNGTLLDGTSFDTSYSKGGTYDTYVGSGWLIKGMDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QVSTLLRPPHCPRMVQDGDFVRYHYNGTLLDGTSFDTSYSKGGTYDTYVGSGWLIKGMDQ
70 80 90 100 110 120
220 230 240 250 260 270
pF1KB6 GLLGMCPGERRKIIIPPFLAYGEKGYGTVIPPQASLVFHVLLIDVHNPKDAVQLETLELP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLLGMCPGERRKIIIPPFLAYGEKGYGTVIPPQASLVFHVLLIDVHNPKDAVQLETLELP
130 140 150 160 170 180
280 290 300 310 320 330
pF1KB6 PGCVRRAGAGDFMRYHYNGSLMDGTLFDSSYSRNHTYNTYIGQGYIIPGMDQGLQGACMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PGCVRRAGAGDFMRYHYNGSLMDGTLFDSSYSRNHTYNTYIGQGYIIPGMDQGLQGACMG
190 200 210 220 230 240
340 350 360 370 380 390
pF1KB6 ERRRITIPPHLAYGENGTGDKIPGSAVLIFNVHVIDFHNPADVVEIRTLSRPSETCNETT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ERRRITIPPHLAYGENGTGDKIPGSAVLIFNVHVIDFHNPADVVEIRTLSRPSETCNETT
250 260 270 280 290 300
400 410 420 430
pF1KB6 KLGDFVRYHYNCSLLDGTQLFTS-------------------HDYGAPQEATLGANKVIE
::::::::::::::::::::::: ::::::::::::::::::
XP_011 KLGDFVRYHYNCSLLDGTQLFTSGETDAGSHEPSRPHFRGQRHDYGAPQEATLGANKVIE
310 320 330 340 350 360
440 450 460 470 480 490
pF1KB6 GLDTGLQGMCVGERRQLIVPPHLAHGESGARGVPGSAVLLFEVELVSREDGLPTGYLFVW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLDTGLQGMCVGERRQLIVPPHLAHGESGARGVPGSAVLLFEVELVSREDGLPTGYLFVW
370 380 390 400 410 420
500 510 520 530 540 550
pF1KB6 HKDPPANLFEDMDLNKDGEVPPEEFSTFIKAQVSEGKGRLMPGQDPEKTIGDMFQNQDRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HKDPPANLFEDMDLNKDGEVPPEEFSTFIKAQVSEGKGRLMPGQDPEKTIGDMFQNQDRN
430 440 450 460 470 480
560 570 580
pF1KB6 QDGKITVDELKLKSDEDEERVHEEL
:::::::::::::::::::::::::
XP_011 QDGKITVDELKLKSDEDEERVHEEL
490 500 510
>>XP_011513417 (OMIM: 616257) PREDICTED: peptidyl-prolyl (359 aa)
initn: 2290 init1: 1509 opt: 1537 Z-score: 1781.8 bits: 338.9 E(85289): 1.7e-92
Smith-Waterman score: 1537; 61.7% identity (82.1% similar) in 347 aa overlap (15-359:12-351)
10 20 30 40 50
pF1KB6 MFPAGPPSHSLLRLPLLQLLLLVVQAVGRGLGRASPAGGPLED--VVIERYHIPRACPRE
::: ::: :. :.:.:..: : . ::: .: :::
XP_011 MAFRGWRPPPPPLLLLLLWVT-------GQAAPVAGLGSDAELQIERRFVPDECPRT
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 VQMGDFVRYHYNGTFEDGKKFDSSYDRNTLVAIVVGVGRLITGMDRGLMGMCVNERRRLI
:. :::::::: ::: ::.::::::::.. . :: :.::::::..:.:::::::: .
XP_011 VRSGDFVRYHYVGTFPDGQKFDSSYDRDSTFNVFVGKGQLITGMDQALVGMCVNERRFVK
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 VPPHLGYGSIGLAGLIPPDATLYFDVVLLDVWNKEDTVQVSTLLRPPHCPRMVQDGDFVR
.::.:.::. :..:.:::...:.:::.:.:.::.:: ::. : ..:: ::: .: .::::
XP_011 IPPKLAYGNEGVSGVIPPNSVLHFDVLLMDIWNSEDQVQIHTYFKPPSCPRTIQVSDFVR
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB6 YHYNGTLLDGTSFDTSYSKGGTYDTYVGSGWLIKGMDQGLLGMCPGERRKIIIPPFLAYG
::::::.:::: ::.:... ::::::: :::: :::.:::::: ::.: : ::::::::
XP_011 YHYNGTFLDGTLFDSSHNRMKTYDTYVGIGWLIPGMDKGLLGMCVGEKRIITIPPFLAYG
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB6 EKGYGTVIPPQASLVFHVLLIDVHNPKDAVQLETLELPPGCVRRAGAGDFMRYHYNGSLM
: : : :: :::::: : :.:.:::::....:. .: .: : . .:::.::::::.:.
XP_011 EDGDGKDIPGQASLVFDVALLDLHNPKDSISIENKVVPENCERISQSGDFLRYHYNGTLL
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB6 DGTLFDSSYSRNHTYNTYIGQGYIIPGMDQGLQGACMGERRRITIPPHLAYGENGTGDKI
::::::::::::.:..:::::::.:::::.:: :.:.::.:::..::::.:::.: : .
XP_011 DGTLFDSSYSRNRTFDTYIGQGYVIPGMDEGLLGVCIGEKRRIVVPPHLGYGEEGRGGET
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB6 PGSAVLIFNVHVIDFHNPADVVEIRTLSRPSETCNETTKLGDFVRYHYNCSLLDGTQLFT
:
XP_011 PSIHPSKIY
>>NP_001271272 (OMIM: 616257) peptidyl-prolyl cis-trans (338 aa)
initn: 2120 init1: 553 opt: 1357 Z-score: 1573.7 bits: 300.4 E(85289): 6.5e-81
Smith-Waterman score: 1357; 56.3% identity (80.4% similar) in 341 aa overlap (243-582:3-338)
220 230 240 250 260 270
pF1KB6 GMDQGLLGMCPGERRKIIIPPFLAYGEKGYGTVIPPQASLVFHVLLIDVHNPKDAVQLET
: :: :::::: : :.:.:::::....:.
NP_001 MAGKDIPGQASLVFDVALLDLHNPKDSISIEN
10 20 30
280 290 300 310 320 330
pF1KB6 LELPPGCVRRAGAGDFMRYHYNGSLMDGTLFDSSYSRNHTYNTYIGQGYIIPGMDQGLQG
.: .: : . .:::.::::::.:.::::::::::::.:..:::::::.:::::.:: :
NP_001 KVVPENCERISQSGDFLRYHYNGTLLDGTLFDSSYSRNRTFDTYIGQGYVIPGMDEGLLG
40 50 60 70 80 90
340 350 360 370 380 390
pF1KB6 ACMGERRRITIPPHLAYGENGTGDKIPGSAVLIFNVHVIDFHNPADVVEIRTLSRPSETC
.:.::.:::..::::.:::.: :. :::::::.:..::::::::.: . : . .: . :
NP_001 VCIGEKRRIVVPPHLGYGEEGRGN-IPGSAVLVFDIHVIDFHNPSDSISITSHYKPPD-C
100 110 120 130 140 150
400 410 420 430 440 450
pF1KB6 NETTKLGDFVRYHYNCSLLDGTQLFTSHDYGAPQEATLGANKVIEGLDTGLQGMCVGERR
. .: ::...:::: :::::: : .. . : . .::...:. :.: ::. :::::.:
NP_001 SVLSKKGDYLKYHYNASLLDGTLLDSTWNLGKTYNIVLGSGQVVLGMDMGLREMCVGEKR
160 170 180 190 200 210
460 470 480 490 500 510
pF1KB6 QLIVPPHLAHGESGARG-VPGSAVLLFEVELVSREDGLPTGYLFVWHKDPPANLFEDMDL
.:.::::..::.:. : :::::::.:..::. ::: ::.:.:. . ::::..:
NP_001 TVIIPPHLGYGEAGVDGEVPGSAVLVFDIELLELVAGLPEGYMFIWNGEVSPNLFEEIDK
220 230 240 250 260 270
520 530 540 550 560 570
pF1KB6 NKDGEVPPEEFSTFIKAQVSEGKGRLMPGQDPEKTIGDMFQNQDRNQDGKITVDELKLKS
. .::: :::: .:.:::. :::.: :: : : . .:: ::::: :::.:..:.:::
NP_001 DGNGEVLLEEFSEYIHAQVASGKGKLAPGFDAELIVKNMFTNQDRNGDGKVTAEEFKLK-
280 290 300 310 320
580
pF1KB6 DEDEERVHEEL
:.: :.::
NP_001 --DQEAKHDEL
330
>>NP_476433 (OMIM: 186946) peptidyl-prolyl cis-trans iso (142 aa)
initn: 661 init1: 326 opt: 335 Z-score: 395.6 bits: 81.1 E(85289): 2.7e-15
Smith-Waterman score: 335; 46.2% identity (69.8% similar) in 106 aa overlap (156-261:31-136)
130 140 150 160 170 180
pF1KB6 GSIGLAGLIPPDATLYFDVVLLDVWNKEDTVQVSTLLRPPHCPRMVQDGDFVRYHYNGTL
.:... : ::: . :: ...::.: :
NP_476 MRLSWFRVLTVLSICLSAVATATGAEGKRKLQIGVKKRVDHCPIKSRKGDVLHMHYTGKL
10 20 30 40 50 60
190 200 210 220 230 240
pF1KB6 LDGTSFDTSYSKGGTYDTYVGSGWLIKGMDQGLLGMCPGERRKIIIPPFLAYGEKGYGTV
::: ::.: .. . .:.: .::: :::::::: ::.::..:: :.:::.:
NP_476 EDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPK
70 80 90 100 110 120
250 260 270 280 290 300
pF1KB6 IPPQASLVFHVLLIDVHNPKDAVQLETLELPPGCVRRAGAGDFMRYHYNGSLMDGTLFDS
:: :.:::.: :. .
NP_476 IPGGATLVFEVELLKIERRTEL
130 140
>>NP_004461 (OMIM: 186946) peptidyl-prolyl cis-trans iso (142 aa)
initn: 661 init1: 326 opt: 335 Z-score: 395.6 bits: 81.1 E(85289): 2.7e-15
Smith-Waterman score: 335; 46.2% identity (69.8% similar) in 106 aa overlap (156-261:31-136)
130 140 150 160 170 180
pF1KB6 GSIGLAGLIPPDATLYFDVVLLDVWNKEDTVQVSTLLRPPHCPRMVQDGDFVRYHYNGTL
.:... : ::: . :: ...::.: :
NP_004 MRLSWFRVLTVLSICLSAVATATGAEGKRKLQIGVKKRVDHCPIKSRKGDVLHMHYTGKL
10 20 30 40 50 60
190 200 210 220 230 240
pF1KB6 LDGTSFDTSYSKGGTYDTYVGSGWLIKGMDQGLLGMCPGERRKIIIPPFLAYGEKGYGTV
::: ::.: .. . .:.: .::: :::::::: ::.::..:: :.:::.:
NP_004 EDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPK
70 80 90 100 110 120
250 260 270 280 290 300
pF1KB6 IPPQASLVFHVLLIDVHNPKDAVQLETLELPPGCVRRAGAGDFMRYHYNGSLMDGTLFDS
:: :.:::.: :. .
NP_004 IPGGATLVFEVELLKIERRTEL
130 140
>>NP_001128680 (OMIM: 186946) peptidyl-prolyl cis-trans (142 aa)
initn: 661 init1: 326 opt: 335 Z-score: 395.6 bits: 81.1 E(85289): 2.7e-15
Smith-Waterman score: 335; 46.2% identity (69.8% similar) in 106 aa overlap (156-261:31-136)
130 140 150 160 170 180
pF1KB6 GSIGLAGLIPPDATLYFDVVLLDVWNKEDTVQVSTLLRPPHCPRMVQDGDFVRYHYNGTL
.:... : ::: . :: ...::.: :
NP_001 MRLSWFRVLTVLSICLSAVATATGAEGKRKLQIGVKKRVDHCPIKSRKGDVLHMHYTGKL
10 20 30 40 50 60
190 200 210 220 230 240
pF1KB6 LDGTSFDTSYSKGGTYDTYVGSGWLIKGMDQGLLGMCPGERRKIIIPPFLAYGEKGYGTV
::: ::.: .. . .:.: .::: :::::::: ::.::..:: :.:::.:
NP_001 EDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPK
70 80 90 100 110 120
250 260 270 280 290 300
pF1KB6 IPPQASLVFHVLLIDVHNPKDAVQLETLELPPGCVRRAGAGDFMRYHYNGSLMDGTLFDS
:: :.:::.: :. .
NP_001 IPGGATLVFEVELLKIERRTEL
130 140
582 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 21:47:02 2016 done: Fri Nov 4 21:47:03 2016
Total Scan time: 8.950 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]