FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6161, 599 aa
  1>>>pF1KB6161 599 - 599 aa - 599 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.6686+/-0.00118; mu= 17.9589+/- 0.071
 mean_var=85.8310+/-16.786, 0's: 0 Z-trim(103.6): 71  B-trim: 38 in 1/48
 Lambda= 0.138437
 statistics sampled from 7427 (7494) to 7427 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.586), E-opt: 0.2 (0.23), width:  16
 Scan time:  3.070

The best scores are:                                      opt bits E(32554)
CCDS34071.1 ABCE1 gene_id:6059|Hs108|chr4          ( 599) 3971 803.7       0


>>CCDS34071.1 ABCE1 gene_id:6059|Hs108|chr4               (599 aa)
 initn: 3971 init1: 3971 opt: 3971  Z-score: 4289.2  bits: 803.7 E(32554):    0
Smith-Waterman score: 3971; 100.0% identity (100.0% similar) in 599 aa overlap (1-599:1-599)

               10        20        30        40        50        60
pF1KB6 MADKLTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTPQSKIAWISETLCIGCGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MADKLTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTPQSKIAWISETLCIGCGI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 CIKKCPFGALSIVNLPSNLEKETTHRYCANAFKLHRLPIPRPGEVLGLVGTNGIGKSTAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 CIKKCPFGALSIVNLPSNLEKETTHRYCANAFKLHRLPIPRPGEVLGLVGTNGIGKSTAL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 KILAGKQKPNLGKYDDPPDWQEILTYFRGSELQNYFTKILEDDLKAIIKPQYVDQIPKAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 KILAGKQKPNLGKYDDPPDWQEILTYFRGSELQNYFTKILEDDLKAIIKPQYVDQIPKAA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 KGTVGSILDRKDETKTQAIVCQQLDLTHLKERNVEDLSGGELQRFACAVVCIQKADIFMF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 KGTVGSILDRKDETKTQAIVCQQLDLTHLKERNVEDLSGGELQRFACAVVCIQKADIFMF
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 DEPSSYLDVKQRLKAAITIRSLINPDRYIIVVEHDLSVLDYLSDFICCLYGVPSAYGVVT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 DEPSSYLDVKQRLKAAITIRSLINPDRYIIVVEHDLSVLDYLSDFICCLYGVPSAYGVVT
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB6 MPFSVREGINIFLDGYVPTENLRFRDASLVFKVAETANEEEVKKMCMYKYPGMKKKMGEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MPFSVREGINIFLDGYVPTENLRFRDASLVFKVAETANEEEVKKMCMYKYPGMKKKMGEF
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB6 ELAIVAGEFTDSEIMVMLGENGTGKTTFIRMLAGRLKPDEGGEVPVLNVSYKPQKISPKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 ELAIVAGEFTDSEIMVMLGENGTGKTTFIRMLAGRLKPDEGGEVPVLNVSYKPQKISPKS
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB6 TGSVRQLLHEKIRDAYTHPQFVTDVMKPLQIENIIDQEVQTLSGGELQRVALALCLGKPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 TGSVRQLLHEKIRDAYTHPQFVTDVMKPLQIENIIDQEVQTLSGGELQRVALALCLGKPA
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB6 DVYLIDEPSAYLDSEQRLMAARVVKRFILHAKKTAFVVEHDFIMATYLADRVIVFDGVPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 DVYLIDEPSAYLDSEQRLMAARVVKRFILHAKKTAFVVEHDFIMATYLADRVIVFDGVPS
              490       500       510       520       530       540

              550       560       570       580       590         
pF1KB6 KNTVANSPQTLLAGMNKFLSQLEITFRRDPNNYRPRINKLNSIKDVEQKKSGNYFFLDD
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 KNTVANSPQTLLAGMNKFLSQLEITFRRDPNNYRPRINKLNSIKDVEQKKSGNYFFLDD
              550       560       570       580       590         




599 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 18:41:28 2016 done: Sat Nov  5 18:41:28 2016
 Total Scan time:  3.070 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]