Result of FASTA (omim) for
pF1KB6187
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6187, 660 aa
1>>>pF1KB6187 660 - 660 aa - 660 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.0125+/-0.000408; mu= -2.0193+/- 0.025
mean_var=244.4399+/-50.504, 0's: 0 Z-trim(119.8): 109 B-trim: 44 in 1/56
Lambda= 0.082033
statistics sampled from 34229 (34339) to 34229 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.735), E-opt: 0.2 (0.403), width: 16
Scan time: 11.030
The best scores are: opt bits E(85289)
XP_011539335 (OMIM: 616396) PREDICTED: polycomb pr ( 660) 4556 552.6 1.6e-156
NP_001026864 (OMIM: 616396) polycomb protein SCMH1 ( 660) 4556 552.6 1.6e-156
XP_011539334 (OMIM: 616396) PREDICTED: polycomb pr ( 670) 4378 531.6 3.6e-150
XP_006710525 (OMIM: 616396) PREDICTED: polycomb pr ( 670) 4378 531.6 3.6e-150
XP_011539337 (OMIM: 616396) PREDICTED: polycomb pr ( 613) 4193 509.6 1.3e-143
XP_006710527 (OMIM: 616396) PREDICTED: polycomb pr ( 599) 4106 499.3 1.6e-140
NP_001165692 (OMIM: 616396) polycomb protein SCMH1 ( 599) 4106 499.3 1.6e-140
XP_016856188 (OMIM: 616396) PREDICTED: polycomb pr ( 599) 4106 499.3 1.6e-140
XP_011539338 (OMIM: 616396) PREDICTED: polycomb pr ( 599) 4106 499.3 1.6e-140
XP_011539336 (OMIM: 616396) PREDICTED: polycomb pr ( 621) 3788 461.7 3.6e-129
XP_016856187 (OMIM: 616396) PREDICTED: polycomb pr ( 618) 3666 447.3 7.9e-125
XP_011539347 (OMIM: 616396) PREDICTED: polycomb pr ( 569) 3650 445.4 2.8e-124
NP_001165690 (OMIM: 616396) polycomb protein SCMH1 ( 648) 3636 443.7 9.7e-124
XP_016856189 (OMIM: 616396) PREDICTED: polycomb pr ( 564) 3603 439.8 1.3e-122
NP_036368 (OMIM: 616396) polycomb protein SCMH1 is ( 591) 3451 421.8 3.5e-117
XP_011539346 (OMIM: 616396) PREDICTED: polycomb pr ( 492) 3368 411.9 2.7e-114
XP_011539345 (OMIM: 616396) PREDICTED: polycomb pr ( 492) 3368 411.9 2.7e-114
NP_001165689 (OMIM: 616396) polycomb protein SCMH1 ( 577) 3364 411.5 4.3e-114
NP_001165691 (OMIM: 616396) polycomb protein SCMH1 ( 577) 3364 411.5 4.3e-114
XP_011539342 (OMIM: 616396) PREDICTED: polycomb pr ( 523) 3212 393.5 1e-108
XP_016856190 (OMIM: 616396) PREDICTED: polycomb pr ( 559) 3045 373.8 9.7e-103
XP_016856194 (OMIM: 616396) PREDICTED: polycomb pr ( 502) 3022 371.0 5.9e-102
XP_016856195 (OMIM: 616396) PREDICTED: polycomb pr ( 488) 2992 367.4 6.7e-101
XP_016856191 (OMIM: 616396) PREDICTED: polycomb pr ( 547) 2908 357.5 7.2e-98
XP_016856192 (OMIM: 616396) PREDICTED: polycomb pr ( 547) 2908 357.5 7.2e-98
XP_016856198 (OMIM: 616396) PREDICTED: polycomb pr ( 470) 2626 324.1 7.1e-88
XP_016856193 (OMIM: 616396) PREDICTED: polycomb pr ( 537) 2303 285.9 2.6e-76
NP_001165693 (OMIM: 616396) polycomb protein SCMH1 ( 480) 2280 283.2 1.5e-75
XP_016856196 (OMIM: 616396) PREDICTED: polycomb pr ( 480) 2280 283.2 1.5e-75
XP_016856199 (OMIM: 616396) PREDICTED: polycomb pr ( 466) 2250 279.6 1.8e-74
XP_016856202 (OMIM: 616396) PREDICTED: polycomb pr ( 449) 2045 255.3 3.4e-67
XP_016856197 (OMIM: 616396) PREDICTED: polycomb pr ( 479) 2045 255.4 3.6e-67
XP_011539341 (OMIM: 616396) PREDICTED: polycomb pr ( 550) 2045 255.4 4.1e-67
XP_006724521 (OMIM: 300208) PREDICTED: sex comb on ( 609) 1751 220.6 1.3e-56
XP_016884710 (OMIM: 300208) PREDICTED: sex comb on ( 609) 1751 220.6 1.3e-56
NP_006080 (OMIM: 300208) sex comb on midleg-like p ( 700) 1751 220.7 1.5e-56
XP_016884709 (OMIM: 300208) PREDICTED: sex comb on ( 700) 1751 220.7 1.5e-56
XP_016884708 (OMIM: 300208) PREDICTED: sex comb on ( 700) 1751 220.7 1.5e-56
XP_016856201 (OMIM: 616396) PREDICTED: polycomb pr ( 457) 1303 167.5 9.5e-41
XP_016856200 (OMIM: 616396) PREDICTED: polycomb pr ( 457) 1303 167.5 9.5e-41
XP_016884711 (OMIM: 300208) PREDICTED: sex comb on ( 436) 585 82.6 3.5e-15
XP_016881566 (OMIM: 617135) PREDICTED: lethal(3)ma ( 370) 580 81.9 4.6e-15
XP_006722427 (OMIM: 617135) PREDICTED: lethal(3)ma ( 485) 580 82.0 5.7e-15
XP_016881564 (OMIM: 617135) PREDICTED: lethal(3)ma ( 488) 580 82.0 5.7e-15
XP_016881565 (OMIM: 617135) PREDICTED: lethal(3)ma ( 488) 580 82.0 5.7e-15
XP_011524067 (OMIM: 617135) PREDICTED: lethal(3)ma ( 497) 580 82.0 5.8e-15
NP_056293 (OMIM: 608802) lethal(3)malignant brain ( 772) 584 82.6 6e-15
XP_011524065 (OMIM: 617135) PREDICTED: lethal(3)ma ( 521) 580 82.0 6e-15
NP_115479 (OMIM: 608802) lethal(3)malignant brain ( 840) 584 82.6 6.4e-15
XP_011524064 (OMIM: 617135) PREDICTED: lethal(3)ma ( 567) 580 82.0 6.5e-15
>>XP_011539335 (OMIM: 616396) PREDICTED: polycomb protei (660 aa)
initn: 4556 init1: 4556 opt: 4556 Z-score: 2930.9 bits: 552.6 E(85289): 1.6e-156
Smith-Waterman score: 4556; 100.0% identity (100.0% similar) in 660 aa overlap (1-660:1-660)
10 20 30 40 50 60
pF1KB6 MLVCYSVLACEILWDLPCSIMGSPLGHFTWDKYLKETCSVPAPVHCFKQSYTPPSNEFKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MLVCYSVLACEILWDLPCSIMGSPLGHFTWDKYLKETCSVPAPVHCFKQSYTPPSNEFKI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 SMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIGNCEKNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIGNCEKNG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 GMLQPPLGFRLNASSWPMFLLKTLNGAEMAPIRIFHKEPPSPSHNFFKMGMKLEAVDRKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GMLQPPLGFRLNASSWPMFLLKTLNGAEMAPIRIFHKEPPSPSHNFFKMGMKLEAVDRKN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 PHFICPATIGEVRGSEVLVTFDGWRGAFDYWCRFDSRDIFPVGWCSLTGDNLQPPGTKVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PHFICPATIGEVRGSEVLVTFDGWRGAFDYWCRFDSRDIFPVGWCSLTGDNLQPPGTKVV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 IPKNPYPASDVNTEKPSIHSSTKTVLEHQPGQRGRKPGKKRGRTPKTLISHPISAPSKTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IPKNPYPASDVNTEKPSIHSSTKTVLEHQPGQRGRKPGKKRGRTPKTLISHPISAPSKTA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 EPLKFPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAMQAPTVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EPLKFPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAMQAPTVC
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 IYLNKNGSTGPHLDKKKVQQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSFLKQGHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IYLNKNGSTGPHLDKKKVQQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSFLKQGHG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 GEVISAVFDREQHTLNLPAVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQTHLSLTAIEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GEVISAVFDREQHTLNLPAVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQTHLSLTAIEY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 SHSHDRYLPGETFVLGNSLARSLEPHSDSMDSASNPTNLVSTSQRHRPLLSSCGLPPSTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SHSHDRYLPGETFVLGNSLARSLEPHSDSMDSASNPTNLVSTSQRHRPLLSSCGLPPSTA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 SAVRRLCSRGVLKGSNERRDMESFWKLNRSPGSDRYLESRDASRLSGRDPSSWTVEDVMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SAVRRLCSRGVLKGSNERRDMESFWKLNRSPGSDRYLESRDASRLSGRDPSSWTVEDVMQ
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB6 FVREADPQLGPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLSYHIDRLKQGKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FVREADPQLGPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLSYHIDRLKQGKF
610 620 630 640 650 660
>>NP_001026864 (OMIM: 616396) polycomb protein SCMH1 iso (660 aa)
initn: 4556 init1: 4556 opt: 4556 Z-score: 2930.9 bits: 552.6 E(85289): 1.6e-156
Smith-Waterman score: 4556; 100.0% identity (100.0% similar) in 660 aa overlap (1-660:1-660)
10 20 30 40 50 60
pF1KB6 MLVCYSVLACEILWDLPCSIMGSPLGHFTWDKYLKETCSVPAPVHCFKQSYTPPSNEFKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLVCYSVLACEILWDLPCSIMGSPLGHFTWDKYLKETCSVPAPVHCFKQSYTPPSNEFKI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 SMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIGNCEKNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIGNCEKNG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 GMLQPPLGFRLNASSWPMFLLKTLNGAEMAPIRIFHKEPPSPSHNFFKMGMKLEAVDRKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GMLQPPLGFRLNASSWPMFLLKTLNGAEMAPIRIFHKEPPSPSHNFFKMGMKLEAVDRKN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 PHFICPATIGEVRGSEVLVTFDGWRGAFDYWCRFDSRDIFPVGWCSLTGDNLQPPGTKVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PHFICPATIGEVRGSEVLVTFDGWRGAFDYWCRFDSRDIFPVGWCSLTGDNLQPPGTKVV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 IPKNPYPASDVNTEKPSIHSSTKTVLEHQPGQRGRKPGKKRGRTPKTLISHPISAPSKTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IPKNPYPASDVNTEKPSIHSSTKTVLEHQPGQRGRKPGKKRGRTPKTLISHPISAPSKTA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 EPLKFPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAMQAPTVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EPLKFPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAMQAPTVC
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 IYLNKNGSTGPHLDKKKVQQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSFLKQGHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IYLNKNGSTGPHLDKKKVQQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSFLKQGHG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 GEVISAVFDREQHTLNLPAVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQTHLSLTAIEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GEVISAVFDREQHTLNLPAVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQTHLSLTAIEY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 SHSHDRYLPGETFVLGNSLARSLEPHSDSMDSASNPTNLVSTSQRHRPLLSSCGLPPSTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SHSHDRYLPGETFVLGNSLARSLEPHSDSMDSASNPTNLVSTSQRHRPLLSSCGLPPSTA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 SAVRRLCSRGVLKGSNERRDMESFWKLNRSPGSDRYLESRDASRLSGRDPSSWTVEDVMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SAVRRLCSRGVLKGSNERRDMESFWKLNRSPGSDRYLESRDASRLSGRDPSSWTVEDVMQ
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB6 FVREADPQLGPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLSYHIDRLKQGKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FVREADPQLGPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLSYHIDRLKQGKF
610 620 630 640 650 660
>>XP_011539334 (OMIM: 616396) PREDICTED: polycomb protei (670 aa)
initn: 4378 init1: 4378 opt: 4378 Z-score: 2816.9 bits: 531.6 E(85289): 3.6e-150
Smith-Waterman score: 4378; 100.0% identity (100.0% similar) in 636 aa overlap (25-660:35-670)
10 20 30 40 50
pF1KB6 MLVCYSVLACEILWDLPCSIMGSPLGHFTWDKYLKETCSVPAPVHCFKQSYTPP
::::::::::::::::::::::::::::::
XP_011 VIDWSDVRKHKYGHLSESASQYQEAADILDLGHFTWDKYLKETCSVPAPVHCFKQSYTPP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 SNEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SNEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIG
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 NCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPIRIFHKEPPSPSHNFFKMGMKLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPIRIFHKEPPSPSHNFFKMGMKLE
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 AVDRKNPHFICPATIGEVRGSEVLVTFDGWRGAFDYWCRFDSRDIFPVGWCSLTGDNLQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AVDRKNPHFICPATIGEVRGSEVLVTFDGWRGAFDYWCRFDSRDIFPVGWCSLTGDNLQP
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 PGTKVVIPKNPYPASDVNTEKPSIHSSTKTVLEHQPGQRGRKPGKKRGRTPKTLISHPIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PGTKVVIPKNPYPASDVNTEKPSIHSSTKTVLEHQPGQRGRKPGKKRGRTPKTLISHPIS
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB6 APSKTAEPLKFPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 APSKTAEPLKFPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAM
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB6 QAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSF
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB6 LKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQTHLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQTHLS
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB6 LTAIEYSHSHDRYLPGETFVLGNSLARSLEPHSDSMDSASNPTNLVSTSQRHRPLLSSCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LTAIEYSHSHDRYLPGETFVLGNSLARSLEPHSDSMDSASNPTNLVSTSQRHRPLLSSCG
490 500 510 520 530 540
540 550 560 570 580 590
pF1KB6 LPPSTASAVRRLCSRGVLKGSNERRDMESFWKLNRSPGSDRYLESRDASRLSGRDPSSWT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LPPSTASAVRRLCSRGVLKGSNERRDMESFWKLNRSPGSDRYLESRDASRLSGRDPSSWT
550 560 570 580 590 600
600 610 620 630 640 650
pF1KB6 VEDVMQFVREADPQLGPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLSYHIDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VEDVMQFVREADPQLGPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLSYHIDR
610 620 630 640 650 660
660
pF1KB6 LKQGKF
::::::
XP_011 LKQGKF
670
>>XP_006710525 (OMIM: 616396) PREDICTED: polycomb protei (670 aa)
initn: 4378 init1: 4378 opt: 4378 Z-score: 2816.9 bits: 531.6 E(85289): 3.6e-150
Smith-Waterman score: 4378; 100.0% identity (100.0% similar) in 636 aa overlap (25-660:35-670)
10 20 30 40 50
pF1KB6 MLVCYSVLACEILWDLPCSIMGSPLGHFTWDKYLKETCSVPAPVHCFKQSYTPP
::::::::::::::::::::::::::::::
XP_006 VIDWSDVRKHKYGHLSESASQYQEAADILDLGHFTWDKYLKETCSVPAPVHCFKQSYTPP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 SNEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SNEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIG
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 NCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPIRIFHKEPPSPSHNFFKMGMKLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPIRIFHKEPPSPSHNFFKMGMKLE
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 AVDRKNPHFICPATIGEVRGSEVLVTFDGWRGAFDYWCRFDSRDIFPVGWCSLTGDNLQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AVDRKNPHFICPATIGEVRGSEVLVTFDGWRGAFDYWCRFDSRDIFPVGWCSLTGDNLQP
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 PGTKVVIPKNPYPASDVNTEKPSIHSSTKTVLEHQPGQRGRKPGKKRGRTPKTLISHPIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PGTKVVIPKNPYPASDVNTEKPSIHSSTKTVLEHQPGQRGRKPGKKRGRTPKTLISHPIS
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB6 APSKTAEPLKFPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 APSKTAEPLKFPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAM
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB6 QAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSF
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB6 LKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQTHLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQTHLS
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB6 LTAIEYSHSHDRYLPGETFVLGNSLARSLEPHSDSMDSASNPTNLVSTSQRHRPLLSSCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LTAIEYSHSHDRYLPGETFVLGNSLARSLEPHSDSMDSASNPTNLVSTSQRHRPLLSSCG
490 500 510 520 530 540
540 550 560 570 580 590
pF1KB6 LPPSTASAVRRLCSRGVLKGSNERRDMESFWKLNRSPGSDRYLESRDASRLSGRDPSSWT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LPPSTASAVRRLCSRGVLKGSNERRDMESFWKLNRSPGSDRYLESRDASRLSGRDPSSWT
550 560 570 580 590 600
600 610 620 630 640 650
pF1KB6 VEDVMQFVREADPQLGPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLSYHIDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VEDVMQFVREADPQLGPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLSYHIDR
610 620 630 640 650 660
660
pF1KB6 LKQGKF
::::::
XP_006 LKQGKF
670
>>XP_011539337 (OMIM: 616396) PREDICTED: polycomb protei (613 aa)
initn: 4193 init1: 4193 opt: 4193 Z-score: 2699.2 bits: 509.6 E(85289): 1.3e-143
Smith-Waterman score: 4193; 100.0% identity (100.0% similar) in 612 aa overlap (49-660:2-613)
20 30 40 50 60 70
pF1KB6 SIMGSPLGHFTWDKYLKETCSVPAPVHCFKQSYTPPSNEFKISMKLEAQDPRNTTSTCIA
::::::::::::::::::::::::::::::
XP_011 MQSYTPPSNEFKISMKLEAQDPRNTTSTCIA
10 20 30
80 90 100 110 120 130
pF1KB6 TVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIGNCEKNGGMLQPPLGFRLNASSWPM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIGNCEKNGGMLQPPLGFRLNASSWPM
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB6 FLLKTLNGAEMAPIRIFHKEPPSPSHNFFKMGMKLEAVDRKNPHFICPATIGEVRGSEVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FLLKTLNGAEMAPIRIFHKEPPSPSHNFFKMGMKLEAVDRKNPHFICPATIGEVRGSEVL
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB6 VTFDGWRGAFDYWCRFDSRDIFPVGWCSLTGDNLQPPGTKVVIPKNPYPASDVNTEKPSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VTFDGWRGAFDYWCRFDSRDIFPVGWCSLTGDNLQPPGTKVVIPKNPYPASDVNTEKPSI
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB6 HSSTKTVLEHQPGQRGRKPGKKRGRTPKTLISHPISAPSKTAEPLKFPKKRGPKPGSKRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HSSTKTVLEHQPGQRGRKPGKKRGRTPKTLISHPISAPSKTAEPLKFPKKRGPKPGSKRK
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB6 PRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAMQAPTVCIYLNKNGSTGPHLDKKKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAMQAPTVCIYLNKNGSTGPHLDKKKV
280 290 300 310 320 330
380 390 400 410 420 430
pF1KB6 QQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSFLKQGHGGEVISAVFDREQHTLNLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSFLKQGHGGEVISAVFDREQHTLNLP
340 350 360 370 380 390
440 450 460 470 480 490
pF1KB6 AVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQTHLSLTAIEYSHSHDRYLPGETFVLGNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQTHLSLTAIEYSHSHDRYLPGETFVLGNS
400 410 420 430 440 450
500 510 520 530 540 550
pF1KB6 LARSLEPHSDSMDSASNPTNLVSTSQRHRPLLSSCGLPPSTASAVRRLCSRGVLKGSNER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LARSLEPHSDSMDSASNPTNLVSTSQRHRPLLSSCGLPPSTASAVRRLCSRGVLKGSNER
460 470 480 490 500 510
560 570 580 590 600 610
pF1KB6 RDMESFWKLNRSPGSDRYLESRDASRLSGRDPSSWTVEDVMQFVREADPQLGPHADLFRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RDMESFWKLNRSPGSDRYLESRDASRLSGRDPSSWTVEDVMQFVREADPQLGPHADLFRK
520 530 540 550 560 570
620 630 640 650 660
pF1KB6 HEIDGKALLLLRSDMMMKYMGLKLGPALKLSYHIDRLKQGKF
::::::::::::::::::::::::::::::::::::::::::
XP_011 HEIDGKALLLLRSDMMMKYMGLKLGPALKLSYHIDRLKQGKF
580 590 600 610
>>XP_006710527 (OMIM: 616396) PREDICTED: polycomb protei (599 aa)
initn: 4106 init1: 4106 opt: 4106 Z-score: 2643.7 bits: 499.3 E(85289): 1.6e-140
Smith-Waterman score: 4106; 100.0% identity (100.0% similar) in 599 aa overlap (62-660:1-599)
40 50 60 70 80 90
pF1KB6 KYLKETCSVPAPVHCFKQSYTPPSNEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLR
::::::::::::::::::::::::::::::
XP_006 MKLEAQDPRNTTSTCIATVVGLTGARLRLR
10 20 30
100 110 120 130 140 150
pF1KB6 LDGSDNKNDFWRLVDSAEIQPIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LDGSDNKNDFWRLVDSAEIQPIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAP
40 50 60 70 80 90
160 170 180 190 200 210
pF1KB6 IRIFHKEPPSPSHNFFKMGMKLEAVDRKNPHFICPATIGEVRGSEVLVTFDGWRGAFDYW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 IRIFHKEPPSPSHNFFKMGMKLEAVDRKNPHFICPATIGEVRGSEVLVTFDGWRGAFDYW
100 110 120 130 140 150
220 230 240 250 260 270
pF1KB6 CRFDSRDIFPVGWCSLTGDNLQPPGTKVVIPKNPYPASDVNTEKPSIHSSTKTVLEHQPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 CRFDSRDIFPVGWCSLTGDNLQPPGTKVVIPKNPYPASDVNTEKPSIHSSTKTVLEHQPG
160 170 180 190 200 210
280 290 300 310 320 330
pF1KB6 QRGRKPGKKRGRTPKTLISHPISAPSKTAEPLKFPKKRGPKPGSKRKPRTLLNPPPASPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QRGRKPGKKRGRTPKTLISHPISAPSKTAEPLKFPKKRGPKPGSKRKPRTLLNPPPASPT
220 230 240 250 260 270
340 350 360 370 380 390
pF1KB6 TSTPEPDTSTVPQDAATIPSSAMQAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TSTPEPDTSTVPQDAATIPSSAMQAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARAS
280 290 300 310 320 330
400 410 420 430 440 450
pF1KB6 VVLQQAVQACIDCAYHQKTVFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VVLQQAVQACIDCAYHQKTVFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLE
340 350 360 370 380 390
460 470 480 490 500 510
pF1KB6 KLCHNLRSDNLFGNQPFTQTHLSLTAIEYSHSHDRYLPGETFVLGNSLARSLEPHSDSMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KLCHNLRSDNLFGNQPFTQTHLSLTAIEYSHSHDRYLPGETFVLGNSLARSLEPHSDSMD
400 410 420 430 440 450
520 530 540 550 560 570
pF1KB6 SASNPTNLVSTSQRHRPLLSSCGLPPSTASAVRRLCSRGVLKGSNERRDMESFWKLNRSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SASNPTNLVSTSQRHRPLLSSCGLPPSTASAVRRLCSRGVLKGSNERRDMESFWKLNRSP
460 470 480 490 500 510
580 590 600 610 620 630
pF1KB6 GSDRYLESRDASRLSGRDPSSWTVEDVMQFVREADPQLGPHADLFRKHEIDGKALLLLRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GSDRYLESRDASRLSGRDPSSWTVEDVMQFVREADPQLGPHADLFRKHEIDGKALLLLRS
520 530 540 550 560 570
640 650 660
pF1KB6 DMMMKYMGLKLGPALKLSYHIDRLKQGKF
:::::::::::::::::::::::::::::
XP_006 DMMMKYMGLKLGPALKLSYHIDRLKQGKF
580 590
>>NP_001165692 (OMIM: 616396) polycomb protein SCMH1 iso (599 aa)
initn: 4106 init1: 4106 opt: 4106 Z-score: 2643.7 bits: 499.3 E(85289): 1.6e-140
Smith-Waterman score: 4106; 100.0% identity (100.0% similar) in 599 aa overlap (62-660:1-599)
40 50 60 70 80 90
pF1KB6 KYLKETCSVPAPVHCFKQSYTPPSNEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLR
::::::::::::::::::::::::::::::
NP_001 MKLEAQDPRNTTSTCIATVVGLTGARLRLR
10 20 30
100 110 120 130 140 150
pF1KB6 LDGSDNKNDFWRLVDSAEIQPIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LDGSDNKNDFWRLVDSAEIQPIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAP
40 50 60 70 80 90
160 170 180 190 200 210
pF1KB6 IRIFHKEPPSPSHNFFKMGMKLEAVDRKNPHFICPATIGEVRGSEVLVTFDGWRGAFDYW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IRIFHKEPPSPSHNFFKMGMKLEAVDRKNPHFICPATIGEVRGSEVLVTFDGWRGAFDYW
100 110 120 130 140 150
220 230 240 250 260 270
pF1KB6 CRFDSRDIFPVGWCSLTGDNLQPPGTKVVIPKNPYPASDVNTEKPSIHSSTKTVLEHQPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CRFDSRDIFPVGWCSLTGDNLQPPGTKVVIPKNPYPASDVNTEKPSIHSSTKTVLEHQPG
160 170 180 190 200 210
280 290 300 310 320 330
pF1KB6 QRGRKPGKKRGRTPKTLISHPISAPSKTAEPLKFPKKRGPKPGSKRKPRTLLNPPPASPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QRGRKPGKKRGRTPKTLISHPISAPSKTAEPLKFPKKRGPKPGSKRKPRTLLNPPPASPT
220 230 240 250 260 270
340 350 360 370 380 390
pF1KB6 TSTPEPDTSTVPQDAATIPSSAMQAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TSTPEPDTSTVPQDAATIPSSAMQAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARAS
280 290 300 310 320 330
400 410 420 430 440 450
pF1KB6 VVLQQAVQACIDCAYHQKTVFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VVLQQAVQACIDCAYHQKTVFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLE
340 350 360 370 380 390
460 470 480 490 500 510
pF1KB6 KLCHNLRSDNLFGNQPFTQTHLSLTAIEYSHSHDRYLPGETFVLGNSLARSLEPHSDSMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLCHNLRSDNLFGNQPFTQTHLSLTAIEYSHSHDRYLPGETFVLGNSLARSLEPHSDSMD
400 410 420 430 440 450
520 530 540 550 560 570
pF1KB6 SASNPTNLVSTSQRHRPLLSSCGLPPSTASAVRRLCSRGVLKGSNERRDMESFWKLNRSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SASNPTNLVSTSQRHRPLLSSCGLPPSTASAVRRLCSRGVLKGSNERRDMESFWKLNRSP
460 470 480 490 500 510
580 590 600 610 620 630
pF1KB6 GSDRYLESRDASRLSGRDPSSWTVEDVMQFVREADPQLGPHADLFRKHEIDGKALLLLRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GSDRYLESRDASRLSGRDPSSWTVEDVMQFVREADPQLGPHADLFRKHEIDGKALLLLRS
520 530 540 550 560 570
640 650 660
pF1KB6 DMMMKYMGLKLGPALKLSYHIDRLKQGKF
:::::::::::::::::::::::::::::
NP_001 DMMMKYMGLKLGPALKLSYHIDRLKQGKF
580 590
>>XP_016856188 (OMIM: 616396) PREDICTED: polycomb protei (599 aa)
initn: 4106 init1: 4106 opt: 4106 Z-score: 2643.7 bits: 499.3 E(85289): 1.6e-140
Smith-Waterman score: 4106; 100.0% identity (100.0% similar) in 599 aa overlap (62-660:1-599)
40 50 60 70 80 90
pF1KB6 KYLKETCSVPAPVHCFKQSYTPPSNEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLR
::::::::::::::::::::::::::::::
XP_016 MKLEAQDPRNTTSTCIATVVGLTGARLRLR
10 20 30
100 110 120 130 140 150
pF1KB6 LDGSDNKNDFWRLVDSAEIQPIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LDGSDNKNDFWRLVDSAEIQPIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAP
40 50 60 70 80 90
160 170 180 190 200 210
pF1KB6 IRIFHKEPPSPSHNFFKMGMKLEAVDRKNPHFICPATIGEVRGSEVLVTFDGWRGAFDYW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IRIFHKEPPSPSHNFFKMGMKLEAVDRKNPHFICPATIGEVRGSEVLVTFDGWRGAFDYW
100 110 120 130 140 150
220 230 240 250 260 270
pF1KB6 CRFDSRDIFPVGWCSLTGDNLQPPGTKVVIPKNPYPASDVNTEKPSIHSSTKTVLEHQPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CRFDSRDIFPVGWCSLTGDNLQPPGTKVVIPKNPYPASDVNTEKPSIHSSTKTVLEHQPG
160 170 180 190 200 210
280 290 300 310 320 330
pF1KB6 QRGRKPGKKRGRTPKTLISHPISAPSKTAEPLKFPKKRGPKPGSKRKPRTLLNPPPASPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QRGRKPGKKRGRTPKTLISHPISAPSKTAEPLKFPKKRGPKPGSKRKPRTLLNPPPASPT
220 230 240 250 260 270
340 350 360 370 380 390
pF1KB6 TSTPEPDTSTVPQDAATIPSSAMQAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TSTPEPDTSTVPQDAATIPSSAMQAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARAS
280 290 300 310 320 330
400 410 420 430 440 450
pF1KB6 VVLQQAVQACIDCAYHQKTVFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VVLQQAVQACIDCAYHQKTVFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLE
340 350 360 370 380 390
460 470 480 490 500 510
pF1KB6 KLCHNLRSDNLFGNQPFTQTHLSLTAIEYSHSHDRYLPGETFVLGNSLARSLEPHSDSMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KLCHNLRSDNLFGNQPFTQTHLSLTAIEYSHSHDRYLPGETFVLGNSLARSLEPHSDSMD
400 410 420 430 440 450
520 530 540 550 560 570
pF1KB6 SASNPTNLVSTSQRHRPLLSSCGLPPSTASAVRRLCSRGVLKGSNERRDMESFWKLNRSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SASNPTNLVSTSQRHRPLLSSCGLPPSTASAVRRLCSRGVLKGSNERRDMESFWKLNRSP
460 470 480 490 500 510
580 590 600 610 620 630
pF1KB6 GSDRYLESRDASRLSGRDPSSWTVEDVMQFVREADPQLGPHADLFRKHEIDGKALLLLRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GSDRYLESRDASRLSGRDPSSWTVEDVMQFVREADPQLGPHADLFRKHEIDGKALLLLRS
520 530 540 550 560 570
640 650 660
pF1KB6 DMMMKYMGLKLGPALKLSYHIDRLKQGKF
:::::::::::::::::::::::::::::
XP_016 DMMMKYMGLKLGPALKLSYHIDRLKQGKF
580 590
>>XP_011539338 (OMIM: 616396) PREDICTED: polycomb protei (599 aa)
initn: 4106 init1: 4106 opt: 4106 Z-score: 2643.7 bits: 499.3 E(85289): 1.6e-140
Smith-Waterman score: 4106; 100.0% identity (100.0% similar) in 599 aa overlap (62-660:1-599)
40 50 60 70 80 90
pF1KB6 KYLKETCSVPAPVHCFKQSYTPPSNEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLR
::::::::::::::::::::::::::::::
XP_011 MKLEAQDPRNTTSTCIATVVGLTGARLRLR
10 20 30
100 110 120 130 140 150
pF1KB6 LDGSDNKNDFWRLVDSAEIQPIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LDGSDNKNDFWRLVDSAEIQPIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAP
40 50 60 70 80 90
160 170 180 190 200 210
pF1KB6 IRIFHKEPPSPSHNFFKMGMKLEAVDRKNPHFICPATIGEVRGSEVLVTFDGWRGAFDYW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IRIFHKEPPSPSHNFFKMGMKLEAVDRKNPHFICPATIGEVRGSEVLVTFDGWRGAFDYW
100 110 120 130 140 150
220 230 240 250 260 270
pF1KB6 CRFDSRDIFPVGWCSLTGDNLQPPGTKVVIPKNPYPASDVNTEKPSIHSSTKTVLEHQPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CRFDSRDIFPVGWCSLTGDNLQPPGTKVVIPKNPYPASDVNTEKPSIHSSTKTVLEHQPG
160 170 180 190 200 210
280 290 300 310 320 330
pF1KB6 QRGRKPGKKRGRTPKTLISHPISAPSKTAEPLKFPKKRGPKPGSKRKPRTLLNPPPASPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QRGRKPGKKRGRTPKTLISHPISAPSKTAEPLKFPKKRGPKPGSKRKPRTLLNPPPASPT
220 230 240 250 260 270
340 350 360 370 380 390
pF1KB6 TSTPEPDTSTVPQDAATIPSSAMQAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TSTPEPDTSTVPQDAATIPSSAMQAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARAS
280 290 300 310 320 330
400 410 420 430 440 450
pF1KB6 VVLQQAVQACIDCAYHQKTVFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VVLQQAVQACIDCAYHQKTVFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLE
340 350 360 370 380 390
460 470 480 490 500 510
pF1KB6 KLCHNLRSDNLFGNQPFTQTHLSLTAIEYSHSHDRYLPGETFVLGNSLARSLEPHSDSMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KLCHNLRSDNLFGNQPFTQTHLSLTAIEYSHSHDRYLPGETFVLGNSLARSLEPHSDSMD
400 410 420 430 440 450
520 530 540 550 560 570
pF1KB6 SASNPTNLVSTSQRHRPLLSSCGLPPSTASAVRRLCSRGVLKGSNERRDMESFWKLNRSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SASNPTNLVSTSQRHRPLLSSCGLPPSTASAVRRLCSRGVLKGSNERRDMESFWKLNRSP
460 470 480 490 500 510
580 590 600 610 620 630
pF1KB6 GSDRYLESRDASRLSGRDPSSWTVEDVMQFVREADPQLGPHADLFRKHEIDGKALLLLRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GSDRYLESRDASRLSGRDPSSWTVEDVMQFVREADPQLGPHADLFRKHEIDGKALLLLRS
520 530 540 550 560 570
640 650 660
pF1KB6 DMMMKYMGLKLGPALKLSYHIDRLKQGKF
:::::::::::::::::::::::::::::
XP_011 DMMMKYMGLKLGPALKLSYHIDRLKQGKF
580 590
>>XP_011539336 (OMIM: 616396) PREDICTED: polycomb protei (621 aa)
initn: 4040 init1: 3788 opt: 3788 Z-score: 2440.0 bits: 461.7 E(85289): 3.6e-129
Smith-Waterman score: 3788; 99.8% identity (100.0% similar) in 549 aa overlap (25-573:35-583)
10 20 30 40 50
pF1KB6 MLVCYSVLACEILWDLPCSIMGSPLGHFTWDKYLKETCSVPAPVHCFKQSYTPP
::::::::::::::::::::::::::::::
XP_011 VIDWSDVRKHKYGHLSESASQYQEAADILDLGHFTWDKYLKETCSVPAPVHCFKQSYTPP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 SNEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SNEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIG
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 NCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPIRIFHKEPPSPSHNFFKMGMKLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPIRIFHKEPPSPSHNFFKMGMKLE
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 AVDRKNPHFICPATIGEVRGSEVLVTFDGWRGAFDYWCRFDSRDIFPVGWCSLTGDNLQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AVDRKNPHFICPATIGEVRGSEVLVTFDGWRGAFDYWCRFDSRDIFPVGWCSLTGDNLQP
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 PGTKVVIPKNPYPASDVNTEKPSIHSSTKTVLEHQPGQRGRKPGKKRGRTPKTLISHPIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PGTKVVIPKNPYPASDVNTEKPSIHSSTKTVLEHQPGQRGRKPGKKRGRTPKTLISHPIS
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB6 APSKTAEPLKFPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 APSKTAEPLKFPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAM
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB6 QAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSF
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB6 LKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQTHLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQTHLS
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB6 LTAIEYSHSHDRYLPGETFVLGNSLARSLEPHSDSMDSASNPTNLVSTSQRHRPLLSSCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LTAIEYSHSHDRYLPGETFVLGNSLARSLEPHSDSMDSASNPTNLVSTSQRHRPLLSSCG
490 500 510 520 530 540
540 550 560 570 580 590
pF1KB6 LPPSTASAVRRLCSRGVLKGSNERRDMESFWKLNRSPGSDRYLESRDASRLSGRDPSSWT
::::::::::::::::::::::::::::::::::::::.
XP_011 LPPSTASAVRRLCSRGVLKGSNERRDMESFWKLNRSPGALLSCRVGPIPGEPRCLSTEWP
550 560 570 580 590 600
600 610 620 630 640 650
pF1KB6 VEDVMQFVREADPQLGPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLSYHIDR
XP_011 GPLLMDSRGCDAVCPGS
610 620
660 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 13:44:20 2016 done: Sat Nov 5 13:44:22 2016
Total Scan time: 11.030 Total Display time: 0.110
Function used was FASTA [36.3.4 Apr, 2011]