Result of FASTA (omim) for
pF1KB6203
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6203, 663 aa
1>>>pF1KB6203 663 - 663 aa - 663 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7022+/-0.000377; mu= 17.7087+/- 0.023
mean_var=75.7447+/-14.781, 0's: 0 Z-trim(113.6): 72 B-trim: 31 in 1/48
Lambda= 0.147366
statistics sampled from 23000 (23068) to 23000 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.644), E-opt: 0.2 (0.27), width: 16
Scan time: 11.060
The best scores are: opt bits E(85289)
NP_036519 (OMIM: 180300,605347) protein-arginine d ( 663) 4514 969.5 0
XP_011539452 (OMIM: 180300,605347) PREDICTED: prot ( 601) 3353 722.7 9.7e-208
XP_011539454 (OMIM: 180300,605347) PREDICTED: prot ( 484) 3324 716.4 5.8e-206
NP_037490 (OMIM: 607934) protein-arginine deiminas ( 663) 2592 560.9 5.3e-159
XP_011539453 (OMIM: 180300,605347) PREDICTED: prot ( 563) 2586 559.6 1.1e-158
XP_011539455 (OMIM: 180300,605347) PREDICTED: prot ( 397) 2578 557.8 2.7e-158
XP_011539456 (OMIM: 180300,605347) PREDICTED: prot ( 397) 2578 557.8 2.7e-158
XP_011539458 (OMIM: 180300,605347) PREDICTED: prot ( 386) 2577 557.6 3.1e-158
XP_011539457 (OMIM: 180300,605347) PREDICTED: prot ( 392) 2577 557.6 3.1e-158
XP_011539459 (OMIM: 180300,605347) PREDICTED: prot ( 366) 2547 551.2 2.5e-156
NP_057317 (OMIM: 606755) protein-arginine deiminas ( 664) 2495 540.3 8.6e-153
XP_016856591 (OMIM: 607934) PREDICTED: protein-arg ( 612) 2466 534.1 5.8e-151
XP_016856590 (OMIM: 607934) PREDICTED: protein-arg ( 612) 2466 534.1 5.8e-151
XP_011539873 (OMIM: 606755) PREDICTED: protein-arg ( 626) 2394 518.8 2.4e-146
NP_031391 (OMIM: 607935) protein-arginine deiminas ( 665) 2276 493.7 9e-139
XP_016856952 (OMIM: 606755) PREDICTED: protein-arg ( 485) 2075 450.9 5e-126
XP_016856592 (OMIM: 607934) PREDICTED: protein-arg ( 594) 1851 403.3 1.3e-111
NP_997304 (OMIM: 610363) protein-arginine deiminas ( 694) 1504 329.6 2.4e-89
XP_011539609 (OMIM: 607934) PREDICTED: protein-arg ( 471) 1457 319.5 1.8e-86
XP_016855637 (OMIM: 607935) PREDICTED: protein-arg ( 350) 1444 316.7 9.3e-86
XP_011539874 (OMIM: 606755) PREDICTED: protein-arg ( 421) 1098 243.2 1.5e-63
>>NP_036519 (OMIM: 180300,605347) protein-arginine deimi (663 aa)
initn: 4514 init1: 4514 opt: 4514 Z-score: 5183.9 bits: 969.5 E(85289): 0
Smith-Waterman score: 4514; 99.4% identity (100.0% similar) in 663 aa overlap (1-663:1-663)
10 20 30 40 50 60
pF1KB6 MAQGTLIRVTPEQPTHAVCVLGTLTQLDICSSAPEDCTSFSINASPGVVVDIAHSPPAKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
NP_036 MAQGTLIRVTPEQPTHAVCVLGTLTQLDICSSAPEDCTSFSINASPGVVVDIAHGPPAKK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 KSTGSSTWPLDPGVEVTLTMKAASGSTGDQKVQISYYGPKTPPVKALLYLTAVEISLCAD
:::::::::::::::::::::.:::::::::::::::::::::::::::::.::::::::
NP_036 KSTGSSTWPLDPGVEVTLTMKVASGSTGDQKVQISYYGPKTPPVKALLYLTGVEISLCAD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ITRTGKVKPTRAVKDQRTWTWGPCGQGAILLVNCDRDNLESSAMDCEDDEVLDSEDLQDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 ITRTGKVKPTRAVKDQRTWTWGPCGQGAILLVNCDRDNLESSAMDCEDDEVLDSEDLQDM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 SLMTLSTKTPKDFFTNHTLVLHVARSEMDKVRVFQATRGKLSSKCSVVLGPKWPSHYLMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 SLMTLSTKTPKDFFTNHTLVLHVARSEMDKVRVFQATRGKLSSKCSVVLGPKWPSHYLMV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 PGGKHNMDFYVEALAFPDTNFPGLITLTISLLDTSNLELPEAVVFQDSVVFRVAPWIMTP
:::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::
NP_036 PGGKHNMDFYVEALAFPDTDFPGLITLTISLLDTSNLELPEAVVFQDSVVFRVAPWIMTP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 NTQPPQEVYACSIFENEDFLKSVTTLAMKAKCKLTICPEEENMDDQWMQDEMEIGYIQAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 NTQPPQEVYACSIFENEDFLKSVTTLAMKAKCKLTICPEEENMDDQWMQDEMEIGYIQAP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 HKTLPVVFDSPRNRGLKEFPIKRVMGPDFGYVTRGPQTGGISGLDSFGNLEVSPPVTVRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 HKTLPVVFDSPRNRGLKEFPIKRVMGPDFGYVTRGPQTGGISGLDSFGNLEVSPPVTVRG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 KEYPLGRILFGDSCYPSNDSRQMHQALQDFLSAQQVQAPVKLYSDWLSVGHVDEFLSFVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 KEYPLGRILFGDSCYPSNDSRQMHQALQDFLSAQQVQAPVKLYSDWLSVGHVDEFLSFVP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 APDRKGFRLLLASPRSCYKLFQEQQNEGHGEALLFEGIKKKKQQKIKNILSNKTLREHNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 APDRKGFRLLLASPRSCYKLFQEQQNEGHGEALLFEGIKKKKQQKIKNILSNKTLREHNS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 FVERCIDWNRELLKRELGLAESDIIDIPQLFKLKEFSKAEAFFPNMVNMLVLGKHLGIPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 FVERCIDWNRELLKRELGLAESDIIDIPQLFKLKEFSKAEAFFPNMVNMLVLGKHLGIPK
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB6 PFGPVINGRCCLEEKVCSLLEPLGLQCTFINDFFTYHIRHGEVHCGTNVRRKPFSFKWWN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 PFGPVINGRCCLEEKVCSLLEPLGLQCTFINDFFTYHIRHGEVHCGTNVRRKPFSFKWWN
610 620 630 640 650 660
pF1KB6 MVP
:::
NP_036 MVP
>>XP_011539452 (OMIM: 180300,605347) PREDICTED: protein- (601 aa)
initn: 3353 init1: 3353 opt: 3353 Z-score: 3850.6 bits: 722.7 E(85289): 9.7e-208
Smith-Waterman score: 3946; 90.0% identity (90.6% similar) in 663 aa overlap (1-663:1-601)
10 20 30 40 50 60
pF1KB6 MAQGTLIRVTPEQPTHAVCVLGTLTQLDICSSAPEDCTSFSINASPGVVVDIAHSPPAKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
XP_011 MAQGTLIRVTPEQPTHAVCVLGTLTQLDICSSAPEDCTSFSINASPGVVVDIAHGPPAKK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 KSTGSSTWPLDPGVEVTLTMKAASGSTGDQKVQISYYGPKTPPVKALLYLTAVEISLCAD
:::::::::::::::::::::.:::::::::::::::::::::::::::::.:
XP_011 KSTGSSTWPLDPGVEVTLTMKVASGSTGDQKVQISYYGPKTPPVKALLYLTGV-------
70 80 90 100 110
130 140 150 160 170 180
pF1KB6 ITRTGKVKPTRAVKDQRTWTWGPCGQGAILLVNCDRDNLESSAMDCEDDEVLDSEDLQDM
:::::
XP_011 -------------------------------------------------------DLQDM
190 200 210 220 230 240
pF1KB6 SLMTLSTKTPKDFFTNHTLVLHVARSEMDKVRVFQATRGKLSSKCSVVLGPKWPSHYLMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SLMTLSTKTPKDFFTNHTLVLHVARSEMDKVRVFQATRGKLSSKCSVVLGPKWPSHYLMV
120 130 140 150 160 170
250 260 270 280 290 300
pF1KB6 PGGKHNMDFYVEALAFPDTNFPGLITLTISLLDTSNLELPEAVVFQDSVVFRVAPWIMTP
:::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::
XP_011 PGGKHNMDFYVEALAFPDTDFPGLITLTISLLDTSNLELPEAVVFQDSVVFRVAPWIMTP
180 190 200 210 220 230
310 320 330 340 350 360
pF1KB6 NTQPPQEVYACSIFENEDFLKSVTTLAMKAKCKLTICPEEENMDDQWMQDEMEIGYIQAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NTQPPQEVYACSIFENEDFLKSVTTLAMKAKCKLTICPEEENMDDQWMQDEMEIGYIQAP
240 250 260 270 280 290
370 380 390 400 410 420
pF1KB6 HKTLPVVFDSPRNRGLKEFPIKRVMGPDFGYVTRGPQTGGISGLDSFGNLEVSPPVTVRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HKTLPVVFDSPRNRGLKEFPIKRVMGPDFGYVTRGPQTGGISGLDSFGNLEVSPPVTVRG
300 310 320 330 340 350
430 440 450 460 470 480
pF1KB6 KEYPLGRILFGDSCYPSNDSRQMHQALQDFLSAQQVQAPVKLYSDWLSVGHVDEFLSFVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KEYPLGRILFGDSCYPSNDSRQMHQALQDFLSAQQVQAPVKLYSDWLSVGHVDEFLSFVP
360 370 380 390 400 410
490 500 510 520 530 540
pF1KB6 APDRKGFRLLLASPRSCYKLFQEQQNEGHGEALLFEGIKKKKQQKIKNILSNKTLREHNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 APDRKGFRLLLASPRSCYKLFQEQQNEGHGEALLFEGIKKKKQQKIKNILSNKTLREHNS
420 430 440 450 460 470
550 560 570 580 590 600
pF1KB6 FVERCIDWNRELLKRELGLAESDIIDIPQLFKLKEFSKAEAFFPNMVNMLVLGKHLGIPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FVERCIDWNRELLKRELGLAESDIIDIPQLFKLKEFSKAEAFFPNMVNMLVLGKHLGIPK
480 490 500 510 520 530
610 620 630 640 650 660
pF1KB6 PFGPVINGRCCLEEKVCSLLEPLGLQCTFINDFFTYHIRHGEVHCGTNVRRKPFSFKWWN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PFGPVINGRCCLEEKVCSLLEPLGLQCTFINDFFTYHIRHGEVHCGTNVRRKPFSFKWWN
540 550 560 570 580 590
pF1KB6 MVP
:::
XP_011 MVP
600
>>XP_011539454 (OMIM: 180300,605347) PREDICTED: protein- (484 aa)
initn: 3324 init1: 3324 opt: 3324 Z-score: 3818.7 bits: 716.4 E(85289): 5.8e-206
Smith-Waterman score: 3324; 99.8% identity (100.0% similar) in 484 aa overlap (180-663:1-484)
150 160 170 180 190 200
pF1KB6 LLVNCDRDNLESSAMDCEDDEVLDSEDLQDMSLMTLSTKTPKDFFTNHTLVLHVARSEMD
::::::::::::::::::::::::::::::
XP_011 MSLMTLSTKTPKDFFTNHTLVLHVARSEMD
10 20 30
210 220 230 240 250 260
pF1KB6 KVRVFQATRGKLSSKCSVVLGPKWPSHYLMVPGGKHNMDFYVEALAFPDTNFPGLITLTI
::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::
XP_011 KVRVFQATRGKLSSKCSVVLGPKWPSHYLMVPGGKHNMDFYVEALAFPDTDFPGLITLTI
40 50 60 70 80 90
270 280 290 300 310 320
pF1KB6 SLLDTSNLELPEAVVFQDSVVFRVAPWIMTPNTQPPQEVYACSIFENEDFLKSVTTLAMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SLLDTSNLELPEAVVFQDSVVFRVAPWIMTPNTQPPQEVYACSIFENEDFLKSVTTLAMK
100 110 120 130 140 150
330 340 350 360 370 380
pF1KB6 AKCKLTICPEEENMDDQWMQDEMEIGYIQAPHKTLPVVFDSPRNRGLKEFPIKRVMGPDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AKCKLTICPEEENMDDQWMQDEMEIGYIQAPHKTLPVVFDSPRNRGLKEFPIKRVMGPDF
160 170 180 190 200 210
390 400 410 420 430 440
pF1KB6 GYVTRGPQTGGISGLDSFGNLEVSPPVTVRGKEYPLGRILFGDSCYPSNDSRQMHQALQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GYVTRGPQTGGISGLDSFGNLEVSPPVTVRGKEYPLGRILFGDSCYPSNDSRQMHQALQD
220 230 240 250 260 270
450 460 470 480 490 500
pF1KB6 FLSAQQVQAPVKLYSDWLSVGHVDEFLSFVPAPDRKGFRLLLASPRSCYKLFQEQQNEGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FLSAQQVQAPVKLYSDWLSVGHVDEFLSFVPAPDRKGFRLLLASPRSCYKLFQEQQNEGH
280 290 300 310 320 330
510 520 530 540 550 560
pF1KB6 GEALLFEGIKKKKQQKIKNILSNKTLREHNSFVERCIDWNRELLKRELGLAESDIIDIPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GEALLFEGIKKKKQQKIKNILSNKTLREHNSFVERCIDWNRELLKRELGLAESDIIDIPQ
340 350 360 370 380 390
570 580 590 600 610 620
pF1KB6 LFKLKEFSKAEAFFPNMVNMLVLGKHLGIPKPFGPVINGRCCLEEKVCSLLEPLGLQCTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LFKLKEFSKAEAFFPNMVNMLVLGKHLGIPKPFGPVINGRCCLEEKVCSLLEPLGLQCTF
400 410 420 430 440 450
630 640 650 660
pF1KB6 INDFFTYHIRHGEVHCGTNVRRKPFSFKWWNMVP
::::::::::::::::::::::::::::::::::
XP_011 INDFFTYHIRHGEVHCGTNVRRKPFSFKWWNMVP
460 470 480
>>NP_037490 (OMIM: 607934) protein-arginine deiminase ty (663 aa)
initn: 762 init1: 762 opt: 2592 Z-score: 2975.5 bits: 560.9 E(85289): 5.3e-159
Smith-Waterman score: 2592; 56.7% identity (81.3% similar) in 669 aa overlap (1-663:1-663)
10 20 30 40 50 60
pF1KB6 MAQGTLIRVTPEQPTHAVCVLGTLTQLDICSSAPEDCTSFSINASPGVVVDIAHSPPAKK
:: ..... ..:::::::.:. ...:: :..:. .:: ...: :: : .... :
NP_037 MAPKRVVQLSLKMPTHAVCVVGVEAHVDIHSDVPKGANSFRVSGSSGVEVFMVYNRTRVK
10 20 30 40 50 60
70 80 90 100 110
pF1KB6 KSTGSSTWPLDPGVEVTLTMKAASGSTGDQKVQISYYGPKTPPV--KALLYLTAVEISLC
. :.. :::: ....... .:: : ::..::.: . . ...::::.:.:::
NP_037 EPIGKARWPLDTDADMVVSVGTASKELKDFKVRVSYFGEQEDQALGRSVLYLTGVDISLE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 ADITRTGKVKPTRAVKDQRTWTWGPCGQGAILLVNCDRDNLESSAMDCEDDEVLDSEDLQ
.: :::::: :. :..:: ::: : :::::::::::: .:. : . ... :::
NP_037 VDTGRTGKVK--RSQGDKKTWRWGPEGYGAILLVNCDRDNHRSAEPDLTHSWLMSLADLQ
130 140 150 160 170
180 190 200 210 220 230
pF1KB6 DMSLMTLSTKTPKDFFTNHTLVLHVARSEMDKVRVFQATRGKLSSKCSVVLGPKWPSHYL
::: : :: . : .: .: :::.: :. .:::: : :. : . ::::. :. .
NP_037 DMSPMLLSCNGPDKLFDSHKLVLNVPFSDSKRVRVFCARGGNSLSDYKQVLGPQCLSYEV
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB6 MVPGGKHNMDFYVEALAFPDTNFPGLITLTISLLDTSNLELPEAVVFQDSVVFRVAPWIM
:.... ::::.:.:::..: ::..:..::.: .. :::...: :.: ::.:::::
NP_037 ERQPGEQEIKFYVEGLTFPDADFLGLVSLSVSLVDPGT--LPEVTLFTDTVGFRMAPWIM
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB6 TPNTQPPQEVYACSIFE----NEDFLKSVTTLAMKAKCKLTICPEEENMDDQWMQDEMEI
:::::::.:.:.: ... :: ::.... :..::.:::::::. :: .:.:.:::::.
NP_037 TPNTQPPEELYVCRVMDTHGSNEKFLEDMSYLTLKANCKLTICPQVENRNDRWIQDEMEF
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB6 GYIQAPHKTLPVVFDSPRNRGLKEFPIKRVMGPDFGYVTRGPQTGGISGLDSFGNLEVSP
:::.::::..:::::::::::::.:: ::..::::::::: : :.:::::::.:::
NP_037 GYIEAPHKSFPVVFDSPRNRGLKDFPYKRILGPDFGYVTREIPLPGPSSLDSFGNLDVSP
360 370 380 390 400 410
420 430 440 450 460 470
pF1KB6 PVTVRGKEYPLGRILFGDSCYPSNDSRQMHQALQDFLSAQQVQAPVKLYSDWLSVGHVDE
:::: : ::::::::.:.: .:.. .::: .:...::.::::::::.:::::::::::::
NP_037 PVTVGGTEYPLGRILIGSS-FPKSGGRQMARAVRNFLKAQQVQAPVELYSDWLSVGHVDE
420 430 440 450 460 470
480 490 500 510 520 530
pF1KB6 FLSFVPAPDRKGFRLLLASPRSCYKLFQEQQNEGHGEALLFEGIKKKKQQKIKNILSNKT
::.:::. :.:::::::::: .: :::::...::.::: :.:.:.. ...:...:...
NP_037 FLTFVPTSDQKGFRLLLASPSACLKLFQEKKEEGYGEAAQFDGLKHQAKRSINEMLADRH
480 490 500 510 520 530
540 550 560 570 580 590
pF1KB6 LREHNSFVERCIDWNRELLKRELGLAESDIIDIPQLFKLKEFSKAEAFFPNMVNMLVLGK
:.. : ...::::::..::::::::::::.:::::: ::.: ::::::.::::.::::
NP_037 LQRDNLHAQKCIDWNRNVLKRELGLAESDIVDIPQLFFLKNFY-AEAFFPDMVNMVVLGK
540 550 560 570 580 590
600 610 620 630 640 650
pF1KB6 HLGIPKPFGPVINGRCCLEEKVCSLLEPLGLQCTFINDFFTYHIRHGEVHCGTNVRRKPF
.::::::.::.::::::::::: ::::::::.: ::.:...:: .::.:::::::::::
NP_037 YLGIPKPYGPIINGRCCLEEKVQSLLEPLGLHCIFIDDYLSYHELQGEIHCGTNVRRKPF
600 610 620 630 640 650
660
pF1KB6 SFKWWNMVP
::::::::
NP_037 PFKWWNMVP
660
>>XP_011539453 (OMIM: 180300,605347) PREDICTED: protein- (563 aa)
initn: 2585 init1: 2585 opt: 2586 Z-score: 2969.7 bits: 559.6 E(85289): 1.1e-158
Smith-Waterman score: 3608; 84.3% identity (84.9% similar) in 663 aa overlap (1-663:1-563)
10 20 30 40 50 60
pF1KB6 MAQGTLIRVTPEQPTHAVCVLGTLTQLDICSSAPEDCTSFSINASPGVVVDIAHSPPAKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
XP_011 MAQGTLIRVTPEQPTHAVCVLGTLTQLDICSSAPEDCTSFSINASPGVVVDIAHGPPAKK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 KSTGSSTWPLDPGVEVTLTMKAASGSTGDQKVQISYYGPKTPPVKALLYLTAVEISLCAD
:::::::::::::::::::::.:::::::::::::::::::::::::::::.::::::::
XP_011 KSTGSSTWPLDPGVEVTLTMKVASGSTGDQKVQISYYGPKTPPVKALLYLTGVEISLCAD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ITRTGKVKPTRAVKDQRTWTWGPCGQGAILLVNCDRDNLESSAMDCEDDEVLDSEDLQDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ITRTGKVKPTRAVKDQRTWTWGPCGQGAILLVNCDRDNLESSAMDCEDDEVLDSEDLQDM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 SLMTLSTKTPKDFFTNHTLVLHVARSEMDKVRVFQATRGKLSSKCSVVLGPKWPSHYLMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SLMTLSTKTPKDFFTNHTLVLHVARSEMDKVRVFQATRGKLSSKCSVVLGPKWPSHYLMV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 PGGKHNMDFYVEALAFPDTNFPGLITLTISLLDTSNLELPEAVVFQDSVVFRVAPWIMTP
:::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::
XP_011 PGGKHNMDFYVEALAFPDTDFPGLITLTISLLDTSNLELPEAVVFQDSVVFRVAPWIMTP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 NTQPPQEVYACSIFENEDFLKSVTTLAMKAKCKLTICPEEENMDDQWMQDEMEIGYIQAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NTQPPQEVYACSIFENEDFLKSVTTLAMKAKCKLTICPEEENMDDQWMQDEMEIGYIQAP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 HKTLPVVFDSPRNRGLKEFPIKRVMGPDFGYVTRGPQTGGISGLDSFGNLEVSPPVTVRG
::::::::::::::::::::::::::
XP_011 HKTLPVVFDSPRNRGLKEFPIKRVMG----------------------------------
370 380
430 440 450 460 470 480
pF1KB6 KEYPLGRILFGDSCYPSNDSRQMHQALQDFLSAQQVQAPVKLYSDWLSVGHVDEFLSFVP
XP_011 ------------------------------------------------------------
490 500 510 520 530 540
pF1KB6 APDRKGFRLLLASPRSCYKLFQEQQNEGHGEALLFEGIKKKKQQKIKNILSNKTLREHNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ------FRLLLASPRSCYKLFQEQQNEGHGEALLFEGIKKKKQQKIKNILSNKTLREHNS
390 400 410 420 430 440
550 560 570 580 590 600
pF1KB6 FVERCIDWNRELLKRELGLAESDIIDIPQLFKLKEFSKAEAFFPNMVNMLVLGKHLGIPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FVERCIDWNRELLKRELGLAESDIIDIPQLFKLKEFSKAEAFFPNMVNMLVLGKHLGIPK
450 460 470 480 490 500
610 620 630 640 650 660
pF1KB6 PFGPVINGRCCLEEKVCSLLEPLGLQCTFINDFFTYHIRHGEVHCGTNVRRKPFSFKWWN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PFGPVINGRCCLEEKVCSLLEPLGLQCTFINDFFTYHIRHGEVHCGTNVRRKPFSFKWWN
510 520 530 540 550 560
pF1KB6 MVP
:::
XP_011 MVP
>>XP_011539455 (OMIM: 180300,605347) PREDICTED: protein- (397 aa)
initn: 2577 init1: 2577 opt: 2578 Z-score: 2962.8 bits: 557.8 E(85289): 2.7e-158
Smith-Waterman score: 2578; 97.2% identity (98.7% similar) in 394 aa overlap (1-394:1-394)
10 20 30 40 50 60
pF1KB6 MAQGTLIRVTPEQPTHAVCVLGTLTQLDICSSAPEDCTSFSINASPGVVVDIAHSPPAKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
XP_011 MAQGTLIRVTPEQPTHAVCVLGTLTQLDICSSAPEDCTSFSINASPGVVVDIAHGPPAKK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 KSTGSSTWPLDPGVEVTLTMKAASGSTGDQKVQISYYGPKTPPVKALLYLTAVEISLCAD
:::::::::::::::::::::.:::::::::::::::::::::::::::::.::::::::
XP_011 KSTGSSTWPLDPGVEVTLTMKVASGSTGDQKVQISYYGPKTPPVKALLYLTGVEISLCAD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ITRTGKVKPTRAVKDQRTWTWGPCGQGAILLVNCDRDNLESSAMDCEDDEVLDSEDLQDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ITRTGKVKPTRAVKDQRTWTWGPCGQGAILLVNCDRDNLESSAMDCEDDEVLDSEDLQDM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 SLMTLSTKTPKDFFTNHTLVLHVARSEMDKVRVFQATRGKLSSKCSVVLGPKWPSHYLMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SLMTLSTKTPKDFFTNHTLVLHVARSEMDKVRVFQATRGKLSSKCSVVLGPKWPSHYLMV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 PGGKHNMDFYVEALAFPDTNFPGLITLTISLLDTSNLELPEAVVFQDSVVFRVAPWIMTP
:::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::
XP_011 PGGKHNMDFYVEALAFPDTDFPGLITLTISLLDTSNLELPEAVVFQDSVVFRVAPWIMTP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 NTQPPQEVYACSIFENEDFLKSVTTLAMKAKCKLTICPEEENMDDQWMQDEMEIGYIQAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NTQPPQEVYACSIFENEDFLKSVTTLAMKAKCKLTICPEEENMDDQWMQDEMEIGYIQAP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 HKTLPVVFDSPRNRGLKEFPIKRVMGPDFGYVTRGPQTGGISGLDSFGNLEVSPPVTVRG
::::::::::::::::::::::::: ..: :
XP_011 HKTLPVVFDSPRNRGLKEFPIKRVMILSIGPFYRRRN
370 380 390
430 440 450 460 470 480
pF1KB6 KEYPLGRILFGDSCYPSNDSRQMHQALQDFLSAQQVQAPVKLYSDWLSVGHVDEFLSFVP
>>XP_011539456 (OMIM: 180300,605347) PREDICTED: protein- (397 aa)
initn: 2577 init1: 2577 opt: 2578 Z-score: 2962.8 bits: 557.8 E(85289): 2.7e-158
Smith-Waterman score: 2578; 97.2% identity (98.7% similar) in 394 aa overlap (1-394:1-394)
10 20 30 40 50 60
pF1KB6 MAQGTLIRVTPEQPTHAVCVLGTLTQLDICSSAPEDCTSFSINASPGVVVDIAHSPPAKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
XP_011 MAQGTLIRVTPEQPTHAVCVLGTLTQLDICSSAPEDCTSFSINASPGVVVDIAHGPPAKK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 KSTGSSTWPLDPGVEVTLTMKAASGSTGDQKVQISYYGPKTPPVKALLYLTAVEISLCAD
:::::::::::::::::::::.:::::::::::::::::::::::::::::.::::::::
XP_011 KSTGSSTWPLDPGVEVTLTMKVASGSTGDQKVQISYYGPKTPPVKALLYLTGVEISLCAD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ITRTGKVKPTRAVKDQRTWTWGPCGQGAILLVNCDRDNLESSAMDCEDDEVLDSEDLQDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ITRTGKVKPTRAVKDQRTWTWGPCGQGAILLVNCDRDNLESSAMDCEDDEVLDSEDLQDM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 SLMTLSTKTPKDFFTNHTLVLHVARSEMDKVRVFQATRGKLSSKCSVVLGPKWPSHYLMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SLMTLSTKTPKDFFTNHTLVLHVARSEMDKVRVFQATRGKLSSKCSVVLGPKWPSHYLMV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 PGGKHNMDFYVEALAFPDTNFPGLITLTISLLDTSNLELPEAVVFQDSVVFRVAPWIMTP
:::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::
XP_011 PGGKHNMDFYVEALAFPDTDFPGLITLTISLLDTSNLELPEAVVFQDSVVFRVAPWIMTP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 NTQPPQEVYACSIFENEDFLKSVTTLAMKAKCKLTICPEEENMDDQWMQDEMEIGYIQAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NTQPPQEVYACSIFENEDFLKSVTTLAMKAKCKLTICPEEENMDDQWMQDEMEIGYIQAP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 HKTLPVVFDSPRNRGLKEFPIKRVMGPDFGYVTRGPQTGGISGLDSFGNLEVSPPVTVRG
::::::::::::::::::::::::: ..: :
XP_011 HKTLPVVFDSPRNRGLKEFPIKRVMILSIGPFYRRRN
370 380 390
430 440 450 460 470 480
pF1KB6 KEYPLGRILFGDSCYPSNDSRQMHQALQDFLSAQQVQAPVKLYSDWLSVGHVDEFLSFVP
>>XP_011539458 (OMIM: 180300,605347) PREDICTED: protein- (386 aa)
initn: 2577 init1: 2577 opt: 2577 Z-score: 2961.8 bits: 557.6 E(85289): 3.1e-158
Smith-Waterman score: 2577; 99.0% identity (100.0% similar) in 385 aa overlap (1-385:1-385)
10 20 30 40 50 60
pF1KB6 MAQGTLIRVTPEQPTHAVCVLGTLTQLDICSSAPEDCTSFSINASPGVVVDIAHSPPAKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
XP_011 MAQGTLIRVTPEQPTHAVCVLGTLTQLDICSSAPEDCTSFSINASPGVVVDIAHGPPAKK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 KSTGSSTWPLDPGVEVTLTMKAASGSTGDQKVQISYYGPKTPPVKALLYLTAVEISLCAD
:::::::::::::::::::::.:::::::::::::::::::::::::::::.::::::::
XP_011 KSTGSSTWPLDPGVEVTLTMKVASGSTGDQKVQISYYGPKTPPVKALLYLTGVEISLCAD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ITRTGKVKPTRAVKDQRTWTWGPCGQGAILLVNCDRDNLESSAMDCEDDEVLDSEDLQDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ITRTGKVKPTRAVKDQRTWTWGPCGQGAILLVNCDRDNLESSAMDCEDDEVLDSEDLQDM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 SLMTLSTKTPKDFFTNHTLVLHVARSEMDKVRVFQATRGKLSSKCSVVLGPKWPSHYLMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SLMTLSTKTPKDFFTNHTLVLHVARSEMDKVRVFQATRGKLSSKCSVVLGPKWPSHYLMV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 PGGKHNMDFYVEALAFPDTNFPGLITLTISLLDTSNLELPEAVVFQDSVVFRVAPWIMTP
:::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::
XP_011 PGGKHNMDFYVEALAFPDTDFPGLITLTISLLDTSNLELPEAVVFQDSVVFRVAPWIMTP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 NTQPPQEVYACSIFENEDFLKSVTTLAMKAKCKLTICPEEENMDDQWMQDEMEIGYIQAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NTQPPQEVYACSIFENEDFLKSVTTLAMKAKCKLTICPEEENMDDQWMQDEMEIGYIQAP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 HKTLPVVFDSPRNRGLKEFPIKRVMGPDFGYVTRGPQTGGISGLDSFGNLEVSPPVTVRG
:::::::::::::::::::::::::
XP_011 HKTLPVVFDSPRNRGLKEFPIKRVMQ
370 380
>>XP_011539457 (OMIM: 180300,605347) PREDICTED: protein- (392 aa)
initn: 2577 init1: 2577 opt: 2577 Z-score: 2961.7 bits: 557.6 E(85289): 3.1e-158
Smith-Waterman score: 2577; 99.0% identity (100.0% similar) in 385 aa overlap (1-385:1-385)
10 20 30 40 50 60
pF1KB6 MAQGTLIRVTPEQPTHAVCVLGTLTQLDICSSAPEDCTSFSINASPGVVVDIAHSPPAKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
XP_011 MAQGTLIRVTPEQPTHAVCVLGTLTQLDICSSAPEDCTSFSINASPGVVVDIAHGPPAKK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 KSTGSSTWPLDPGVEVTLTMKAASGSTGDQKVQISYYGPKTPPVKALLYLTAVEISLCAD
:::::::::::::::::::::.:::::::::::::::::::::::::::::.::::::::
XP_011 KSTGSSTWPLDPGVEVTLTMKVASGSTGDQKVQISYYGPKTPPVKALLYLTGVEISLCAD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ITRTGKVKPTRAVKDQRTWTWGPCGQGAILLVNCDRDNLESSAMDCEDDEVLDSEDLQDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ITRTGKVKPTRAVKDQRTWTWGPCGQGAILLVNCDRDNLESSAMDCEDDEVLDSEDLQDM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 SLMTLSTKTPKDFFTNHTLVLHVARSEMDKVRVFQATRGKLSSKCSVVLGPKWPSHYLMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SLMTLSTKTPKDFFTNHTLVLHVARSEMDKVRVFQATRGKLSSKCSVVLGPKWPSHYLMV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 PGGKHNMDFYVEALAFPDTNFPGLITLTISLLDTSNLELPEAVVFQDSVVFRVAPWIMTP
:::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::
XP_011 PGGKHNMDFYVEALAFPDTDFPGLITLTISLLDTSNLELPEAVVFQDSVVFRVAPWIMTP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 NTQPPQEVYACSIFENEDFLKSVTTLAMKAKCKLTICPEEENMDDQWMQDEMEIGYIQAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NTQPPQEVYACSIFENEDFLKSVTTLAMKAKCKLTICPEEENMDDQWMQDEMEIGYIQAP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 HKTLPVVFDSPRNRGLKEFPIKRVMGPDFGYVTRGPQTGGISGLDSFGNLEVSPPVTVRG
:::::::::::::::::::::::::
XP_011 HKTLPVVFDSPRNRGLKEFPIKRVMEDPRPAL
370 380 390
>>XP_011539459 (OMIM: 180300,605347) PREDICTED: protein- (366 aa)
initn: 2547 init1: 2547 opt: 2547 Z-score: 2927.7 bits: 551.2 E(85289): 2.5e-156
Smith-Waterman score: 2547; 100.0% identity (100.0% similar) in 366 aa overlap (298-663:1-366)
270 280 290 300 310 320
pF1KB6 TISLLDTSNLELPEAVVFQDSVVFRVAPWIMTPNTQPPQEVYACSIFENEDFLKSVTTLA
::::::::::::::::::::::::::::::
XP_011 MTPNTQPPQEVYACSIFENEDFLKSVTTLA
10 20 30
330 340 350 360 370 380
pF1KB6 MKAKCKLTICPEEENMDDQWMQDEMEIGYIQAPHKTLPVVFDSPRNRGLKEFPIKRVMGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKAKCKLTICPEEENMDDQWMQDEMEIGYIQAPHKTLPVVFDSPRNRGLKEFPIKRVMGP
40 50 60 70 80 90
390 400 410 420 430 440
pF1KB6 DFGYVTRGPQTGGISGLDSFGNLEVSPPVTVRGKEYPLGRILFGDSCYPSNDSRQMHQAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DFGYVTRGPQTGGISGLDSFGNLEVSPPVTVRGKEYPLGRILFGDSCYPSNDSRQMHQAL
100 110 120 130 140 150
450 460 470 480 490 500
pF1KB6 QDFLSAQQVQAPVKLYSDWLSVGHVDEFLSFVPAPDRKGFRLLLASPRSCYKLFQEQQNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QDFLSAQQVQAPVKLYSDWLSVGHVDEFLSFVPAPDRKGFRLLLASPRSCYKLFQEQQNE
160 170 180 190 200 210
510 520 530 540 550 560
pF1KB6 GHGEALLFEGIKKKKQQKIKNILSNKTLREHNSFVERCIDWNRELLKRELGLAESDIIDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GHGEALLFEGIKKKKQQKIKNILSNKTLREHNSFVERCIDWNRELLKRELGLAESDIIDI
220 230 240 250 260 270
570 580 590 600 610 620
pF1KB6 PQLFKLKEFSKAEAFFPNMVNMLVLGKHLGIPKPFGPVINGRCCLEEKVCSLLEPLGLQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PQLFKLKEFSKAEAFFPNMVNMLVLGKHLGIPKPFGPVINGRCCLEEKVCSLLEPLGLQC
280 290 300 310 320 330
630 640 650 660
pF1KB6 TFINDFFTYHIRHGEVHCGTNVRRKPFSFKWWNMVP
::::::::::::::::::::::::::::::::::::
XP_011 TFINDFFTYHIRHGEVHCGTNVRRKPFSFKWWNMVP
340 350 360
663 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 14:11:53 2016 done: Sat Nov 5 14:11:54 2016
Total Scan time: 11.060 Total Display time: 0.120
Function used was FASTA [36.3.4 Apr, 2011]