Result of FASTA (ccds) for
pF1KB6240
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6240, 677 aa
1>>>pF1KB6240 677 - 677 aa - 677 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.8138+/-0.00113; mu= -0.5518+/- 0.068
mean_var=234.7567+/-47.342, 0's: 0 Z-trim(111.0): 117 B-trim: 226 in 2/50
Lambda= 0.083708
statistics sampled from 11906 (12023) to 11906 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.705), E-opt: 0.2 (0.369), width: 16
Scan time: 3.560
The best scores are: opt bits E(32554)
CCDS2914.1 FOXP1 gene_id:27086|Hs108|chr3 ( 677) 4486 555.2 1.1e-157
CCDS58839.1 FOXP1 gene_id:27086|Hs108|chr3 ( 676) 4469 553.1 4.7e-157
CCDS58837.1 FOXP1 gene_id:27086|Hs108|chr3 ( 679) 4089 507.2 3.1e-143
CCDS74963.1 FOXP1 gene_id:27086|Hs108|chr3 ( 577) 3837 476.8 3.9e-134
CCDS74964.1 FOXP1 gene_id:27086|Hs108|chr3 ( 693) 3527 439.4 8.4e-123
CCDS58838.1 FOXP1 gene_id:27086|Hs108|chr3 ( 601) 3443 429.2 8.4e-120
CCDS55154.1 FOXP2 gene_id:93986|Hs108|chr7 ( 732) 2463 310.9 4.2e-84
CCDS43635.1 FOXP2 gene_id:93986|Hs108|chr7 ( 740) 2461 310.6 5e-84
CCDS5760.1 FOXP2 gene_id:93986|Hs108|chr7 ( 715) 2459 310.4 5.8e-84
CCDS34447.1 FOXP4 gene_id:116113|Hs108|chr6 ( 680) 2366 299.1 1.3e-80
CCDS34448.1 FOXP4 gene_id:116113|Hs108|chr6 ( 678) 2350 297.2 5.1e-80
CCDS4856.1 FOXP4 gene_id:116113|Hs108|chr6 ( 667) 1205 158.9 2.1e-38
CCDS5761.2 FOXP2 gene_id:93986|Hs108|chr7 ( 432) 1124 149.0 1.3e-35
CCDS48109.1 FOXP3 gene_id:50943|Hs108|chrX ( 396) 535 77.9 3.1e-14
CCDS14323.1 FOXP3 gene_id:50943|Hs108|chrX ( 431) 535 77.9 3.3e-14
>>CCDS2914.1 FOXP1 gene_id:27086|Hs108|chr3 (677 aa)
initn: 4486 init1: 4486 opt: 4486 Z-score: 2944.2 bits: 555.2 E(32554): 1.1e-157
Smith-Waterman score: 4486; 100.0% identity (100.0% similar) in 677 aa overlap (1-677:1-677)
10 20 30 40 50 60
pF1KB6 MMQESGTETKSNGSAIQNGSGGSNHLLECGGLREGRSNGETPAVDIGAADLAHAQQQQQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 MMQESGTETKSNGSAIQNGSGGSNHLLECGGLREGRSNGETPAVDIGAADLAHAQQQQQQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ALQVARQLLLQQQQQQQVSGLKSPKRNDKQPALQVPVSVAMMTPQVITPQQMQQILQQQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 ALQVARQLLLQQQQQQQVSGLKSPKRNDKQPALQVPVSVAMMTPQVITPQQMQQILQQQV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LSPQQLQVLLQQQQALMLQQQQLQEFYKKQQEQLQLQLLQQQHAGKQPKEQQQVATQQLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 LSPQQLQVLLQQQQALMLQQQQLQEFYKKQQEQLQLQLLQQQHAGKQPKEQQQVATQQLA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 FQQQLLQMQQLQQQHLLSLQRQGLLTIQPGQPALPLQPLAQGMIPTELQQLWKEVTSAHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 FQQQLLQMQQLQQQHLLSLQRQGLLTIQPGQPALPLQPLAQGMIPTELQQLWKEVTSAHT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 AEETTGNNHSSLDLTTTCVSSSAPSKTSLIMNPHASTNGQLSVHTPKRESLSHEEHPHSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 AEETTGNNHSSLDLTTTCVSSSAPSKTSLIMNPHASTNGQLSVHTPKRESLSHEEHPHSH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 PLYGHGVCKWPGCEAVCEDFQSFLKHLNSEHALDDRSTAQCRVQMQVVQQLELQLAKDKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 PLYGHGVCKWPGCEAVCEDFQSFLKHLNSEHALDDRSTAQCRVQMQVVQQLELQLAKDKE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 RLQAMMTHLHVKSTEPKAAPQPLNLVSSVTLSKSASEASPQSLPHTPTTPTAPLTPVTQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 RLQAMMTHLHVKSTEPKAAPQPLNLVSSVTLSKSASEASPQSLPHTPTTPTAPLTPVTQG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 PSVITTTSMHTVGPIRRRYSDKYNVPISSADIAQNQEFYKNAEVRPPFTYASLIRQAILE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 PSVITTTSMHTVGPIRRRYSDKYNVPISSADIAQNQEFYKNAEVRPPFTYASLIRQAILE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 SPEKQLTLNEIYNWFTRMFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 SPEKQLTLNEIYNWFTRMFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEVE
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 FQKRRPQKISGNPSLIKNMQSSHAYCTPLNAALQASMAENSIPLYTTASMGNPTLGNLAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 FQKRRPQKISGNPSLIKNMQSSHAYCTPLNAALQASMAENSIPLYTTASMGNPTLGNLAS
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB6 AIREELNGAMEHTNSNESDSSPGRSPMQAVHPVHVKEEPLDPEEAEGPLSLVTTANHSPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 AIREELNGAMEHTNSNESDSSPGRSPMQAVHPVHVKEEPLDPEEAEGPLSLVTTANHSPD
610 620 630 640 650 660
670
pF1KB6 FDHDRDYEDEPVNEDME
:::::::::::::::::
CCDS29 FDHDRDYEDEPVNEDME
670
>>CCDS58839.1 FOXP1 gene_id:27086|Hs108|chr3 (676 aa)
initn: 2959 init1: 2959 opt: 4469 Z-score: 2933.2 bits: 553.1 E(32554): 4.7e-157
Smith-Waterman score: 4469; 99.9% identity (99.9% similar) in 677 aa overlap (1-677:1-676)
10 20 30 40 50 60
pF1KB6 MMQESGTETKSNGSAIQNGSGGSNHLLECGGLREGRSNGETPAVDIGAADLAHAQQQQQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MMQESGTETKSNGSAIQNGSGGSNHLLECGGLREGRSNGETPAVDIGAADLAHAQQQQQQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ALQVARQLLLQQQQQQQVSGLKSPKRNDKQPALQVPVSVAMMTPQVITPQQMQQILQQQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ALQVARQLLLQQQQQQQVSGLKSPKRNDKQPALQVPVSVAMMTPQVITPQQMQQILQQQV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LSPQQLQVLLQQQQALMLQQQQLQEFYKKQQEQLQLQLLQQQHAGKQPKEQQQVATQQLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LSPQQLQVLLQQQQALMLQQQQLQEFYKKQQEQLQLQLLQQQHAGKQPKEQQQVATQQLA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 FQQQLLQMQQLQQQHLLSLQRQGLLTIQPGQPALPLQPLAQGMIPTELQQLWKEVTSAHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 FQQQLLQMQQLQQQHLLSLQRQGLLTIQPGQPALPLQPLAQGMIPTELQQLWKEVTSAHT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 AEETTGNNHSSLDLTTTCVSSSAPSKTSLIMNPHASTNGQLSVHTPKRESLSHEEHPHSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 AEETTGNNHSSLDLTTTCVSSSAPSKTSLIMNPHASTNGQLSVHTPKRESLSHEEHPHSH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 PLYGHGVCKWPGCEAVCEDFQSFLKHLNSEHALDDRSTAQCRVQMQVVQQLELQLAKDKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PLYGHGVCKWPGCEAVCEDFQSFLKHLNSEHALDDRSTAQCRVQMQVVQQLELQLAKDKE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 RLQAMMTHLHVKSTEPKAAPQPLNLVSSVTLSKSASEASPQSLPHTPTTPTAPLTPVTQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RLQAMMTHLHVKSTEPKAAPQPLNLVSSVTLSKSASEASPQSLPHTPTTPTAPLTPVTQG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 PSVITTTSMHTVGPIRRRYSDKYNVPISSADIAQNQEFYKNAEVRPPFTYASLIRQAILE
::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::
CCDS58 PSVITTTSMHTVGPIRRRYSDKYNVPISS-DIAQNQEFYKNAEVRPPFTYASLIRQAILE
430 440 450 460 470
490 500 510 520 530 540
pF1KB6 SPEKQLTLNEIYNWFTRMFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SPEKQLTLNEIYNWFTRMFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEVE
480 490 500 510 520 530
550 560 570 580 590 600
pF1KB6 FQKRRPQKISGNPSLIKNMQSSHAYCTPLNAALQASMAENSIPLYTTASMGNPTLGNLAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 FQKRRPQKISGNPSLIKNMQSSHAYCTPLNAALQASMAENSIPLYTTASMGNPTLGNLAS
540 550 560 570 580 590
610 620 630 640 650 660
pF1KB6 AIREELNGAMEHTNSNESDSSPGRSPMQAVHPVHVKEEPLDPEEAEGPLSLVTTANHSPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 AIREELNGAMEHTNSNESDSSPGRSPMQAVHPVHVKEEPLDPEEAEGPLSLVTTANHSPD
600 610 620 630 640 650
670
pF1KB6 FDHDRDYEDEPVNEDME
:::::::::::::::::
CCDS58 FDHDRDYEDEPVNEDME
660 670
>>CCDS58837.1 FOXP1 gene_id:27086|Hs108|chr3 (679 aa)
initn: 4089 init1: 4089 opt: 4089 Z-score: 2685.1 bits: 507.2 E(32554): 3.1e-143
Smith-Waterman score: 4089; 100.0% identity (100.0% similar) in 617 aa overlap (61-677:63-679)
40 50 60 70 80 90
pF1KB6 GLREGRSNGETPAVDIGAADLAHAQQQQQQALQVARQLLLQQQQQQQVSGLKSPKRNDKQ
::::::::::::::::::::::::::::::
CCDS58 QKQPEPIYSKKTEIQRQTVRAPFAKLFIFSALQVARQLLLQQQQQQQVSGLKSPKRNDKQ
40 50 60 70 80 90
100 110 120 130 140 150
pF1KB6 PALQVPVSVAMMTPQVITPQQMQQILQQQVLSPQQLQVLLQQQQALMLQQQQLQEFYKKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PALQVPVSVAMMTPQVITPQQMQQILQQQVLSPQQLQVLLQQQQALMLQQQQLQEFYKKQ
100 110 120 130 140 150
160 170 180 190 200 210
pF1KB6 QEQLQLQLLQQQHAGKQPKEQQQVATQQLAFQQQLLQMQQLQQQHLLSLQRQGLLTIQPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 QEQLQLQLLQQQHAGKQPKEQQQVATQQLAFQQQLLQMQQLQQQHLLSLQRQGLLTIQPG
160 170 180 190 200 210
220 230 240 250 260 270
pF1KB6 QPALPLQPLAQGMIPTELQQLWKEVTSAHTAEETTGNNHSSLDLTTTCVSSSAPSKTSLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 QPALPLQPLAQGMIPTELQQLWKEVTSAHTAEETTGNNHSSLDLTTTCVSSSAPSKTSLI
220 230 240 250 260 270
280 290 300 310 320 330
pF1KB6 MNPHASTNGQLSVHTPKRESLSHEEHPHSHPLYGHGVCKWPGCEAVCEDFQSFLKHLNSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MNPHASTNGQLSVHTPKRESLSHEEHPHSHPLYGHGVCKWPGCEAVCEDFQSFLKHLNSE
280 290 300 310 320 330
340 350 360 370 380 390
pF1KB6 HALDDRSTAQCRVQMQVVQQLELQLAKDKERLQAMMTHLHVKSTEPKAAPQPLNLVSSVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 HALDDRSTAQCRVQMQVVQQLELQLAKDKERLQAMMTHLHVKSTEPKAAPQPLNLVSSVT
340 350 360 370 380 390
400 410 420 430 440 450
pF1KB6 LSKSASEASPQSLPHTPTTPTAPLTPVTQGPSVITTTSMHTVGPIRRRYSDKYNVPISSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LSKSASEASPQSLPHTPTTPTAPLTPVTQGPSVITTTSMHTVGPIRRRYSDKYNVPISSA
400 410 420 430 440 450
460 470 480 490 500 510
pF1KB6 DIAQNQEFYKNAEVRPPFTYASLIRQAILESPEKQLTLNEIYNWFTRMFAYFRRNAATWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 DIAQNQEFYKNAEVRPPFTYASLIRQAILESPEKQLTLNEIYNWFTRMFAYFRRNAATWK
460 470 480 490 500 510
520 530 540 550 560 570
pF1KB6 NAVRHNLSLHKCFVRVENVKGAVWTVDEVEFQKRRPQKISGNPSLIKNMQSSHAYCTPLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 NAVRHNLSLHKCFVRVENVKGAVWTVDEVEFQKRRPQKISGNPSLIKNMQSSHAYCTPLN
520 530 540 550 560 570
580 590 600 610 620 630
pF1KB6 AALQASMAENSIPLYTTASMGNPTLGNLASAIREELNGAMEHTNSNESDSSPGRSPMQAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 AALQASMAENSIPLYTTASMGNPTLGNLASAIREELNGAMEHTNSNESDSSPGRSPMQAV
580 590 600 610 620 630
640 650 660 670
pF1KB6 HPVHVKEEPLDPEEAEGPLSLVTTANHSPDFDHDRDYEDEPVNEDME
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 HPVHVKEEPLDPEEAEGPLSLVTTANHSPDFDHDRDYEDEPVNEDME
640 650 660 670
>>CCDS74963.1 FOXP1 gene_id:27086|Hs108|chr3 (577 aa)
initn: 3837 init1: 3837 opt: 3837 Z-score: 2521.7 bits: 476.8 E(32554): 3.9e-134
Smith-Waterman score: 3837; 100.0% identity (100.0% similar) in 577 aa overlap (101-677:1-577)
80 90 100 110 120 130
pF1KB6 QQQQQQQVSGLKSPKRNDKQPALQVPVSVAMMTPQVITPQQMQQILQQQVLSPQQLQVLL
::::::::::::::::::::::::::::::
CCDS74 MMTPQVITPQQMQQILQQQVLSPQQLQVLL
10 20 30
140 150 160 170 180 190
pF1KB6 QQQQALMLQQQQLQEFYKKQQEQLQLQLLQQQHAGKQPKEQQQVATQQLAFQQQLLQMQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 QQQQALMLQQQQLQEFYKKQQEQLQLQLLQQQHAGKQPKEQQQVATQQLAFQQQLLQMQQ
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB6 LQQQHLLSLQRQGLLTIQPGQPALPLQPLAQGMIPTELQQLWKEVTSAHTAEETTGNNHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 LQQQHLLSLQRQGLLTIQPGQPALPLQPLAQGMIPTELQQLWKEVTSAHTAEETTGNNHS
100 110 120 130 140 150
260 270 280 290 300 310
pF1KB6 SLDLTTTCVSSSAPSKTSLIMNPHASTNGQLSVHTPKRESLSHEEHPHSHPLYGHGVCKW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 SLDLTTTCVSSSAPSKTSLIMNPHASTNGQLSVHTPKRESLSHEEHPHSHPLYGHGVCKW
160 170 180 190 200 210
320 330 340 350 360 370
pF1KB6 PGCEAVCEDFQSFLKHLNSEHALDDRSTAQCRVQMQVVQQLELQLAKDKERLQAMMTHLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 PGCEAVCEDFQSFLKHLNSEHALDDRSTAQCRVQMQVVQQLELQLAKDKERLQAMMTHLH
220 230 240 250 260 270
380 390 400 410 420 430
pF1KB6 VKSTEPKAAPQPLNLVSSVTLSKSASEASPQSLPHTPTTPTAPLTPVTQGPSVITTTSMH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 VKSTEPKAAPQPLNLVSSVTLSKSASEASPQSLPHTPTTPTAPLTPVTQGPSVITTTSMH
280 290 300 310 320 330
440 450 460 470 480 490
pF1KB6 TVGPIRRRYSDKYNVPISSADIAQNQEFYKNAEVRPPFTYASLIRQAILESPEKQLTLNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 TVGPIRRRYSDKYNVPISSADIAQNQEFYKNAEVRPPFTYASLIRQAILESPEKQLTLNE
340 350 360 370 380 390
500 510 520 530 540 550
pF1KB6 IYNWFTRMFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEVEFQKRRPQKIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 IYNWFTRMFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEVEFQKRRPQKIS
400 410 420 430 440 450
560 570 580 590 600 610
pF1KB6 GNPSLIKNMQSSHAYCTPLNAALQASMAENSIPLYTTASMGNPTLGNLASAIREELNGAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 GNPSLIKNMQSSHAYCTPLNAALQASMAENSIPLYTTASMGNPTLGNLASAIREELNGAM
460 470 480 490 500 510
620 630 640 650 660 670
pF1KB6 EHTNSNESDSSPGRSPMQAVHPVHVKEEPLDPEEAEGPLSLVTTANHSPDFDHDRDYEDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 EHTNSNESDSSPGRSPMQAVHPVHVKEEPLDPEEAEGPLSLVTTANHSPDFDHDRDYEDE
520 530 540 550 560 570
pF1KB6 PVNEDME
:::::::
CCDS74 PVNEDME
>>CCDS74964.1 FOXP1 gene_id:27086|Hs108|chr3 (693 aa)
initn: 4512 init1: 3520 opt: 3527 Z-score: 2318.2 bits: 439.4 E(32554): 8.4e-123
Smith-Waterman score: 4334; 95.2% identity (96.7% similar) in 693 aa overlap (1-677:1-693)
10 20 30 40 50 60
pF1KB6 MMQESGTETKSNGSAIQNGSGGSNHLLECGGLREGRSNGETPAVDIGAADLAHAQQQQQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 MMQESGTETKSNGSAIQNGSGGSNHLLECGGLREGRSNGETPAVDIGAADLAHAQQQQQQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ALQVARQLLLQQQQQQQVSGLKSPKRNDKQPALQVPVSVAMMTPQVITPQQMQQILQQQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 ALQVARQLLLQQQQQQQVSGLKSPKRNDKQPALQVPVSVAMMTPQVITPQQMQQILQQQV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LSPQQLQVLLQQQQALMLQQQQLQEFYKKQQEQLQLQLLQQQHAGKQPKEQQQVATQQLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 LSPQQLQVLLQQQQALMLQQQQLQEFYKKQQEQLQLQLLQQQHAGKQPKEQQQVATQQLA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 FQQQLLQMQQLQQQHLLSLQRQGLLTIQPGQPALPLQPLAQGMIPTELQQLWKEVTSAHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 FQQQLLQMQQLQQQHLLSLQRQGLLTIQPGQPALPLQPLAQGMIPTELQQLWKEVTSAHT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 AEETTGNNHSSLDLTTTCVSSSAPSKTSLIMNPHASTNGQLSVHTPKRESLSHEEHPHSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 AEETTGNNHSSLDLTTTCVSSSAPSKTSLIMNPHASTNGQLSVHTPKRESLSHEEHPHSH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 PLYGHGVCKWPGCEAVCEDFQSFLKHLNSEHALDDRSTAQCRVQMQVVQQLELQLAKDKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 PLYGHGVCKWPGCEAVCEDFQSFLKHLNSEHALDDRSTAQCRVQMQVVQQLELQLAKDKE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 RLQAMMTHLHVKSTEPKAAPQPLNLVSSVTLSKSASEASPQSLPHTPTTPTAPLTPVTQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 RLQAMMTHLHVKSTEPKAAPQPLNLVSSVTLSKSASEASPQSLPHTPTTPTAPLTPVTQG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 PSVITTTSMHTVGPIRRRYSDKYNVPISSADIAQNQEFYKNAEVRPPFTYASLIRQAILE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 PSVITTTSMHTVGPIRRRYSDKYNVPISSADIAQNQEFYKNAEVRPPFTYASLIRQAILE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 SPEKQLTLNEIYNWFTRMFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEVE
::::::::::::::::::::::::::::::.:.: ::::::::.:::. :. ::::. :
CCDS74 SPEKQLTLNEIYNWFTRMFAYFRRNAATWKGAIRTNLSLHKCFIRVEDEFGSFWTVDDEE
490 500 510 520 530 540
550 560 570 580
pF1KB6 F------QKRRPQK----------ISGNPSLIKNMQSSHAYCTPLNAALQASMAENSIPL
: :. ::.: .. :::::::::::::::::::::::::::::::::
CCDS74 FKRGRHIQRGRPRKYCPDENFDELVAHNPSLIKNMQSSHAYCTPLNAALQASMAENSIPL
550 560 570 580 590 600
590 600 610 620 630 640
pF1KB6 YTTASMGNPTLGNLASAIREELNGAMEHTNSNESDSSPGRSPMQAVHPVHVKEEPLDPEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 YTTASMGNPTLGNLASAIREELNGAMEHTNSNESDSSPGRSPMQAVHPVHVKEEPLDPEE
610 620 630 640 650 660
650 660 670
pF1KB6 AEGPLSLVTTANHSPDFDHDRDYEDEPVNEDME
:::::::::::::::::::::::::::::::::
CCDS74 AEGPLSLVTTANHSPDFDHDRDYEDEPVNEDME
670 680 690
>>CCDS58838.1 FOXP1 gene_id:27086|Hs108|chr3 (601 aa)
initn: 3420 init1: 3420 opt: 3443 Z-score: 2264.3 bits: 429.2 E(32554): 8.4e-120
Smith-Waterman score: 3832; 88.8% identity (88.8% similar) in 677 aa overlap (1-677:1-601)
10 20 30 40 50 60
pF1KB6 MMQESGTETKSNGSAIQNGSGGSNHLLECGGLREGRSNGETPAVDIGAADLAHAQQQQQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MMQESGTETKSNGSAIQNGSGGSNHLLECGGLREGRSNGETPAVDIGAADLAHAQQQQQQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ALQVARQLLLQQQQQQQVSGLKSPKRNDKQPALQVPVSVAMMTPQVITPQQMQQILQQQV
::::::::::::::::::::::::::::::::::
CCDS58 ALQVARQLLLQQQQQQQVSGLKSPKRNDKQPALQ--------------------------
70 80 90
130 140 150 160 170 180
pF1KB6 LSPQQLQVLLQQQQALMLQQQQLQEFYKKQQEQLQLQLLQQQHAGKQPKEQQQVATQQLA
::::::::::
CCDS58 --------------------------------------------------QQQVATQQLA
100
190 200 210 220 230 240
pF1KB6 FQQQLLQMQQLQQQHLLSLQRQGLLTIQPGQPALPLQPLAQGMIPTELQQLWKEVTSAHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 FQQQLLQMQQLQQQHLLSLQRQGLLTIQPGQPALPLQPLAQGMIPTELQQLWKEVTSAHT
110 120 130 140 150 160
250 260 270 280 290 300
pF1KB6 AEETTGNNHSSLDLTTTCVSSSAPSKTSLIMNPHASTNGQLSVHTPKRESLSHEEHPHSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 AEETTGNNHSSLDLTTTCVSSSAPSKTSLIMNPHASTNGQLSVHTPKRESLSHEEHPHSH
170 180 190 200 210 220
310 320 330 340 350 360
pF1KB6 PLYGHGVCKWPGCEAVCEDFQSFLKHLNSEHALDDRSTAQCRVQMQVVQQLELQLAKDKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PLYGHGVCKWPGCEAVCEDFQSFLKHLNSEHALDDRSTAQCRVQMQVVQQLELQLAKDKE
230 240 250 260 270 280
370 380 390 400 410 420
pF1KB6 RLQAMMTHLHVKSTEPKAAPQPLNLVSSVTLSKSASEASPQSLPHTPTTPTAPLTPVTQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RLQAMMTHLHVKSTEPKAAPQPLNLVSSVTLSKSASEASPQSLPHTPTTPTAPLTPVTQG
290 300 310 320 330 340
430 440 450 460 470 480
pF1KB6 PSVITTTSMHTVGPIRRRYSDKYNVPISSADIAQNQEFYKNAEVRPPFTYASLIRQAILE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PSVITTTSMHTVGPIRRRYSDKYNVPISSADIAQNQEFYKNAEVRPPFTYASLIRQAILE
350 360 370 380 390 400
490 500 510 520 530 540
pF1KB6 SPEKQLTLNEIYNWFTRMFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SPEKQLTLNEIYNWFTRMFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEVE
410 420 430 440 450 460
550 560 570 580 590 600
pF1KB6 FQKRRPQKISGNPSLIKNMQSSHAYCTPLNAALQASMAENSIPLYTTASMGNPTLGNLAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 FQKRRPQKISGNPSLIKNMQSSHAYCTPLNAALQASMAENSIPLYTTASMGNPTLGNLAS
470 480 490 500 510 520
610 620 630 640 650 660
pF1KB6 AIREELNGAMEHTNSNESDSSPGRSPMQAVHPVHVKEEPLDPEEAEGPLSLVTTANHSPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 AIREELNGAMEHTNSNESDSSPGRSPMQAVHPVHVKEEPLDPEEAEGPLSLVTTANHSPD
530 540 550 560 570 580
670
pF1KB6 FDHDRDYEDEPVNEDME
:::::::::::::::::
CCDS58 FDHDRDYEDEPVNEDME
590 600
>>CCDS55154.1 FOXP2 gene_id:93986|Hs108|chr7 (732 aa)
initn: 2020 init1: 1010 opt: 2463 Z-score: 1623.4 bits: 310.9 E(32554): 4.2e-84
Smith-Waterman score: 2813; 63.3% identity (80.1% similar) in 713 aa overlap (31-677:30-732)
10 20 30 40 50 60
pF1KB6 MMQESGTETKSNGSAIQNGSGGSNHLLECGGLREGRSNGETPAVDIGAADLAHAQQQQQQ
: :.:::.:.: . ......: : ::::
CCDS55 MMQESATETISNSSMNQNGMSTLSSQLDAGSRDGRSSGDTSS-EVSTVELLHLQQQQ--
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 ALQVARQLLLQQQQQQQVSGLKSPKRNDKQPALQVPVSVAMMTPQVITPQQMQQILQQQV
:::.::::::: ::.::::::: .::: ::::::::::::::::::::::::::::
CCDS55 ALQAARQLLLQ----QQTSGLKSPKSSDKQRPLQVPVSVAMMTPQVITPQQMQQILQQQV
60 70 80 90 100 110
130 140 150 160
pF1KB6 LSPQQLQVLLQQQQALMLQQ-----------------QQLQEFYKKQQEQLQLQLLQQQ-
:::::::.:::::::.:::: ::::::::::::::.:::::::
CCDS55 LSPQQLQALLQQQQAVMLQQDFLDSGLENFRAALEKNQQLQEFYKKQQEQLHLQLLQQQQ
120 130 140 150 160 170
170
pF1KB6 ------------------------------------HAGKQPKEQQQ-------VATQQL
: ::: ::::: .:.:::
CCDS55 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQL
180 190 200 210 220 230
180 190 200 210 220 230
pF1KB6 AFQQQLLQMQQLQQQ-HLLSLQRQGLLTIQPGQPALPLQPLAQ-GMIPTELQQLWKEVTS
.:::::::::::::: ::::::::::..: ::: :::.: : : :. :.:.::::::::.
CCDS55 VFQQQLLQMQQLQQQQHLLSLQRQGLISIPPGQAALPVQSLPQAGLSPAEIQQLWKEVTG
240 250 260 270 280 290
240 250 260 270 280 290
pF1KB6 AHTAEETTGNNHSSLDLTTTCVSSSAPSKTSLIMNP---HASTNGQLSVHTPKRESLSHE
.:. :.. : .:..:::::. ::.. :.:: : :. .::: :: . .:.: :::
CCDS55 VHSMEDN-GIKHGGLDLTTNNSSSTTSSNTSKASPPITHHSIVNGQSSVLSARRDSSSHE
300 310 320 330 340 350
300 310 320 330 340 350
pF1KB6 EHPHSHPLYGHGVCKWPGCEAVCEDFQSFLKHLNSEHALDDRSTAQCRVQMQVVQQLELQ
: :: :::::::::::::..:::: .::::::.:::::::::::::::::::::::.:
CCDS55 ETGASHTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQ
360 370 380 390 400 410
360 370 380 390 400 410
pF1KB6 LAKDKERLQAMMTHLHVKSTEPKAAPQPLNLVSSVTLSKSASEASPQSLPHTPTTPTAPL
:.:..:::::::::::.. .::: .:.:::::::::.::. :.::::::.::::::::.
CCDS55 LSKERERLQAMMTHLHMRPSEPKPSPKPLNLVSSVTMSKNMLETSPQSLPQTPTTPTAPV
420 430 440 450 460 470
420 430 440 450 460 470
pF1KB6 TPVTQGPSVITTTSMHTVGPIRRRYSDKYNVPISSADIAQNQEFYKNAEVRPPFTYASLI
::.:::::::: .:. .:: ::::.:::::.:.:: .:: : ::::::.::::::::.::
CCDS55 TPITQGPSVITPASVPNVGAIRRRHSDKYNIPMSS-EIAPNYEFYKNADVRPPFTYATLI
480 490 500 510 520 530
480 490 500 510 520 530
pF1KB6 RQAILESPEKQLTLNEIYNWFTRMFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVW
::::.:: ..::::::::.:::: ::::::::::::::::::::::::::::::::::::
CCDS55 RQAIMESSDRQLTLNEIYSWFTRTFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVW
540 550 560 570 580 590
540 550 560 570 580 590
pF1KB6 TVDEVEFQKRRPQKISGNPSLIKNMQSSHAYCTPLNAALQASMAENSIPLYTTASMGNPT
::::::.:::: :::.:.:.:.::. .: .: . :::.:::..::.:.:: .. .. : .
CCDS55 TVDEVEYQKRRSQKITGSPTLVKNIPTSLGYGAALNASLQAALAESSLPLLSNPGLINNA
600 610 620 630 640 650
600 610 620 630 640 650
pF1KB6 LGNLASAIREELNGAMEHTNSNESDSSPGRSPMQAVHPVHVKEEPLDPEEAEGPLSLVTT
..: .:..:.:::...: .:: ..:::: ::. .: .::::::. :. . :.:::::
CCDS55 SSGLLQAVHEDLNGSLDHIDSN-GNSSPGCSPQPHIHSIHVKEEPVIAEDEDCPMSLVTT
660 670 680 690 700
660 670
pF1KB6 ANHSPDFDHDRDYEDEPVNEDME
:::::... ::. :.::..::.:
CCDS55 ANHSPELEDDREIEEEPLSEDLE
710 720 730
>>CCDS43635.1 FOXP2 gene_id:93986|Hs108|chr7 (740 aa)
initn: 1792 init1: 1010 opt: 2461 Z-score: 1622.0 bits: 310.6 E(32554): 5e-84
Smith-Waterman score: 2783; 62.6% identity (79.2% similar) in 717 aa overlap (35-677:34-740)
10 20 30 40 50 60
pF1KB6 SGTETKSNGSAIQNGSGGSNHLLECGGLREGRSNGETPAVDIGAADLAHAQQQQQQALQV
:::.:.: . ......: : ::: ::::.
CCDS43 ESATETISNSSMNQNGMSTLSSQLDAGSRDGRSSGDTSS-EVSTVELLHLQQQ--QALQA
10 20 30 40 50 60
70 80 90
pF1KB6 ARQLLLQQQQQQQVSGLKSPKRNDKQPALQ-------------------------VPVSV
:::::: :::.::::::: .::: :: :::::
CCDS43 ARQLLL----QQQTSGLKSPKSSDKQRPLQELLPETKLCICGHSSGDGHPHNTFAVPVSV
70 80 90 100 110
100 110 120 130 140 150
pF1KB6 AMMTPQVITPQQMQQILQQQVLSPQQLQVLLQQQQALMLQQQQLQEFYKKQQEQLQLQLL
::::::::::::::::::::::::::::.:::::::.::::::::::::::::::.::::
CCDS43 AMMTPQVITPQQMQQILQQQVLSPQQLQALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLL
120 130 140 150 160 170
160 170
pF1KB6 QQQ-------------------------------------HAGKQPKEQQQ-------VA
::: : ::: ::::: .:
CCDS43 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLA
180 190 200 210 220 230
180 190 200 210 220 230
pF1KB6 TQQLAFQQQLLQMQQLQQQ-HLLSLQRQGLLTIQPGQPALPLQPLAQ-GMIPTELQQLWK
.:::.:::::::::::::: ::::::::::..: ::: :::.: : : :. :.:.:::::
CCDS43 AQQLVFQQQLLQMQQLQQQQHLLSLQRQGLISIPPGQAALPVQSLPQAGLSPAEIQQLWK
240 250 260 270 280 290
240 250 260 270 280 290
pF1KB6 EVTSAHTAEETTGNNHSSLDLTTTCVSSSAPSKTSLIMNP---HASTNGQLSVHTPKRES
:::..:. :.. : .:..:::::. ::.. :.:: : :. .::: :: . .:.:
CCDS43 EVTGVHSMEDN-GIKHGGLDLTTNNSSSTTSSNTSKASPPITHHSIVNGQSSVLSARRDS
300 310 320 330 340 350
300 310 320 330 340 350
pF1KB6 LSHEEHPHSHPLYGHGVCKWPGCEAVCEDFQSFLKHLNSEHALDDRSTAQCRVQMQVVQQ
:::: :: :::::::::::::..:::: .::::::.:::::::::::::::::::::
CCDS43 SSHEETGASHTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQ
360 370 380 390 400 410
360 370 380 390 400 410
pF1KB6 LELQLAKDKERLQAMMTHLHVKSTEPKAAPQPLNLVSSVTLSKSASEASPQSLPHTPTTP
::.::.:..:::::::::::.. .::: .:.:::::::::.::. :.::::::.:::::
CCDS43 LEIQLSKERERLQAMMTHLHMRPSEPKPSPKPLNLVSSVTMSKNMLETSPQSLPQTPTTP
420 430 440 450 460 470
420 430 440 450 460 470
pF1KB6 TAPLTPVTQGPSVITTTSMHTVGPIRRRYSDKYNVPISSADIAQNQEFYKNAEVRPPFTY
:::.::.:::::::: .:. .:: ::::.:::::.:.:: .:: : ::::::.:::::::
CCDS43 TAPVTPITQGPSVITPASVPNVGAIRRRHSDKYNIPMSS-EIAPNYEFYKNADVRPPFTY
480 490 500 510 520 530
480 490 500 510 520 530
pF1KB6 ASLIRQAILESPEKQLTLNEIYNWFTRMFAYFRRNAATWKNAVRHNLSLHKCFVRVENVK
:.::::::.:: ..::::::::.:::: ::::::::::::::::::::::::::::::::
CCDS43 ATLIRQAIMESSDRQLTLNEIYSWFTRTFAYFRRNAATWKNAVRHNLSLHKCFVRVENVK
540 550 560 570 580 590
540 550 560 570 580 590
pF1KB6 GAVWTVDEVEFQKRRPQKISGNPSLIKNMQSSHAYCTPLNAALQASMAENSIPLYTTASM
::::::::::.:::: :::.:.:.:.::. .: .: . :::.:::..::.:.:: .. ..
CCDS43 GAVWTVDEVEYQKRRSQKITGSPTLVKNIPTSLGYGAALNASLQAALAESSLPLLSNPGL
600 610 620 630 640 650
600 610 620 630 640 650
pF1KB6 GNPTLGNLASAIREELNGAMEHTNSNESDSSPGRSPMQAVHPVHVKEEPLDPEEAEGPLS
: . ..: .:..:.:::...: .:: ..:::: ::. .: .::::::. :. . :.:
CCDS43 INNASSGLLQAVHEDLNGSLDHIDSN-GNSSPGCSPQPHIHSIHVKEEPVIAEDEDCPMS
660 670 680 690 700 710
660 670
pF1KB6 LVTTANHSPDFDHDRDYEDEPVNEDME
:::::::::... ::. :.::..::.:
CCDS43 LVTTANHSPELEDDREIEEEPLSEDLE
720 730 740
>>CCDS5760.1 FOXP2 gene_id:93986|Hs108|chr7 (715 aa)
initn: 1808 init1: 1010 opt: 2459 Z-score: 1620.9 bits: 310.4 E(32554): 5.8e-84
Smith-Waterman score: 2882; 63.9% identity (81.3% similar) in 718 aa overlap (9-677:9-715)
10 20 30 40 50 60
pF1KB6 MMQESGTETKSNGSAIQNGSGGSNHLLECGGLREGRSNGETPAVDIGAADLAHAQQQQQQ
: ::.: ::: . . :. :. :.:::.:.: . ......: : ::: :
CCDS57 MMQESATETISNSSMNQNGMSTLSSQLDAGS-RDGRSSGDTSS-EVSTVELLHLQQQ--Q
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 ALQVARQLLLQQQQQQQVSGLKSPKRNDKQPALQVPVSVAMMTPQVITPQQMQQILQQQV
:::.::::::: ::.::::::: .::: ::::::::::::::::::::::::::::
CCDS57 ALQAARQLLLQ----QQTSGLKSPKSSDKQRPLQVPVSVAMMTPQVITPQQMQQILQQQV
60 70 80 90 100 110
130 140 150 160
pF1KB6 LSPQQLQVLLQQQQALMLQQQQLQEFYKKQQEQLQLQLLQQQ------------------
:::::::.:::::::.::::::::::::::::::.:::::::
CCDS57 LSPQQLQALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQ
120 130 140 150 160 170
170 180 190
pF1KB6 -------------------HAGKQPKEQQQ-------VATQQLAFQQQLLQMQQLQQQ-H
: ::: ::::: .:.:::.:::::::::::::: :
CCDS57 QQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVFQQQLLQMQQLQQQQH
180 190 200 210 220 230
200 210 220 230 240 250
pF1KB6 LLSLQRQGLLTIQPGQPALPLQPLAQ-GMIPTELQQLWKEVTSAHTAEETTGNNHSSLDL
:::::::::..: ::: :::.: : : :. :.:.::::::::..:. :.. : .:..:::
CCDS57 LLSLQRQGLISIPPGQAALPVQSLPQAGLSPAEIQQLWKEVTGVHSMEDN-GIKHGGLDL
240 250 260 270 280 290
260 270 280 290 300 310
pF1KB6 TTTCVSSSAPSKTSLIMNP---HASTNGQLSVHTPKRESLSHEEHPHSHPLYGHGVCKWP
::. ::.. :.:: : :. .::: :: . .:.: :::: :: ::::::::::
CCDS57 TTNNSSSTTSSNTSKASPPITHHSIVNGQSSVLSARRDSSSHEETGASHTLYGHGVCKWP
300 310 320 330 340 350
320 330 340 350 360 370
pF1KB6 GCEAVCEDFQSFLKHLNSEHALDDRSTAQCRVQMQVVQQLELQLAKDKERLQAMMTHLHV
:::..:::: .::::::.:::::::::::::::::::::::.::.:..:::::::::::.
CCDS57 GCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKERERLQAMMTHLHM
360 370 380 390 400 410
380 390 400 410 420 430
pF1KB6 KSTEPKAAPQPLNLVSSVTLSKSASEASPQSLPHTPTTPTAPLTPVTQGPSVITTTSMHT
. .::: .:.:::::::::.::. :.::::::.::::::::.::.:::::::: .:. .
CCDS57 RPSEPKPSPKPLNLVSSVTMSKNMLETSPQSLPQTPTTPTAPVTPITQGPSVITPASVPN
420 430 440 450 460 470
440 450 460 470 480 490
pF1KB6 VGPIRRRYSDKYNVPISSADIAQNQEFYKNAEVRPPFTYASLIRQAILESPEKQLTLNEI
:: ::::.:::::.:.:: .:: : ::::::.::::::::.::::::.:: ..:::::::
CCDS57 VGAIRRRHSDKYNIPMSS-EIAPNYEFYKNADVRPPFTYATLIRQAIMESSDRQLTLNEI
480 490 500 510 520 530
500 510 520 530 540 550
pF1KB6 YNWFTRMFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEVEFQKRRPQKISG
:.:::: ::::::::::::::::::::::::::::::::::::::::::.:::: :::.:
CCDS57 YSWFTRTFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEVEYQKRRSQKITG
540 550 560 570 580 590
560 570 580 590 600 610
pF1KB6 NPSLIKNMQSSHAYCTPLNAALQASMAENSIPLYTTASMGNPTLGNLASAIREELNGAME
.:.:.::. .: .: . :::.:::..::.:.:: .. .. : . ..: .:..:.:::...
CCDS57 SPTLVKNIPTSLGYGAALNASLQAALAESSLPLLSNPGLINNASSGLLQAVHEDLNGSLD
600 610 620 630 640 650
620 630 640 650 660 670
pF1KB6 HTNSNESDSSPGRSPMQAVHPVHVKEEPLDPEEAEGPLSLVTTANHSPDFDHDRDYEDEP
: .:: ..:::: ::. .: .::::::. :. . :.::::::::::... ::. :.::
CCDS57 HIDSN-GNSSPGCSPQPHIHSIHVKEEPVIAEDEDCPMSLVTTANHSPELEDDREIEEEP
660 670 680 690 700
pF1KB6 VNEDME
..::.:
CCDS57 LSEDLE
710
>>CCDS34447.1 FOXP4 gene_id:116113|Hs108|chr6 (680 aa)
initn: 1574 init1: 768 opt: 2366 Z-score: 1560.6 bits: 299.1 E(32554): 1.3e-80
Smith-Waterman score: 2370; 57.2% identity (76.7% similar) in 701 aa overlap (1-676:1-679)
10 20 30 40
pF1KB6 MMQESGTETKSNGSAIQNG-----------SGGSNHLLECGGLREGRSNGETPAVDIGAA
:: ::..:: .. . ::: :::.. : :: ..: ... :
CCDS34 MMVESASETIRSAPSGQNGVGSLSGQADGSSGGATGTTASGTGRE-VTTGADSNGEMSPA
10 20 30 40 50
50 60 70 80 90 100
pF1KB6 DLAHAQQQQQQALQVARQLLLQQQQQQQVSGLKSPKRND-KQPA--LQVPVSVAMMTPQV
.: : :::: :::::::.:::: .:::.:: :: :: : .:::::::::.::.
CCDS34 ELLHFQQQQ--ALQVARQFLLQQ-----ASGLSSPGNNDSKQSASAVQVPVSVAMMSPQM
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB6 ITPQQMQQILQQQVLSPQQLQVLLQQQQALMLQQQQLQEFYKKQQEQLQLQLLQQQHAGK
.:::::::: ::: :::.::::::::::: ::::.::::::::.:::: ::.:::
CCDS34 LTPQQMQQI-----LSPPQLQALLQQQQALMLQ--QLQEYYKKQQEQLHLQLLTQQQAGK
120 130 140 150 160
170 180 190 200 210 220
pF1KB6 QPKEQQQVATQQLAFQQQLLQMQQLQQQHLLSLQRQGLLTIQPGQPALPLQPLAQGMI-P
:. .. ....::::::::::::::::::::.::::::...::.: . ::: : :. . :
CCDS34 -PQPKEALGNKQLAFQQQLLQMQQLQQQHLLNLQRQGLVSLQPNQASGPLQTLPQAAVCP
170 180 190 200 210 220
230 240 250 260 270 280
pF1KB6 TELQQLWK-EVTSAHTAEETTGNNHSSLDLTTTCVSSS---APSKTSLIMNPHASTNGQL
:.: :::: : . .. ::... .. .:::: : .... :: :.: .. :. :::
CCDS34 TDLPQLWKGEGAPGQPAEDSV--KQEGLDLTGTAATATSFAAPPKVSPPLSHHTLPNGQP
230 240 250 260 270 280
290 300 310 320 330 340
pF1KB6 SVHTPKRESLSHEEHPHSHPLYGHGVCKWPGCEAVCEDFQSFLKHLNSEHALDDRSTAQC
.: : .:.: :::: : :::::::: :::::::..:::. .:.::::.::::::::::::
CCDS34 TVLTSRRDSSSHEETPGSHPLYGHGECKWPGCETLCEDLGQFIKHLNTEHALDDRSTAQC
290 300 310 320 330 340
350 360 370 380 390
pF1KB6 RVQMQVVQQLELQLAKDKERLQAMMTHLHVKSTEPKAAPQPLNLV-SSVTLSK---SASE
:::::::::::.::::..:::::::.:::.. .::: :::: : .: ..:: ::..
CCDS34 RVQMQVVQQLEIQLAKESERLQAMMAHLHMRPSEPKPFSQPLNPVPGSSSFSKVTVSAAD
350 360 370 380 390 400
400 410 420 430 440 450
pF1KB6 ASPQSLPHTPTTPTAPLTPVTQGPSVITTTSMHTVGPIRRRYSDKYNVPISSADIAQNQE
. :..: : ::. .::.::. : . ..:.: :: ::: :::. :::: ..:::.:
CCDS34 SFPDGLVHPPTSAAAPVTPLR--PPGLGSASLHGGGPARRRSSDKFCSPISS-ELAQNHE
410 420 430 440 450
460 470 480 490 500 510
pF1KB6 FYKNAEVRPPFTYASLIRQAILESPEKQLTLNEIYNWFTRMFAYFRRNAATWKNAVRHNL
:::::.:::::::::::::::::.:..:::::::::::::::::::::.:::::::::::
CCDS34 FYKNADVRPPFTYASLIRQAILETPDRQLTLNEIYNWFTRMFAYFRRNTATWKNAVRHNL
460 470 480 490 500 510
520 530 540 550 560 570
pF1KB6 SLHKCFVRVENVKGAVWTVDEVEFQKRRPQKISGNPSLIKNMQSSHAYCTPLNAALQASM
::::::::::::::::::::: :.::::: :..:.:.:.::: :. .: . :::. ::..
CCDS34 SLHKCFVRVENVKGAVWTVDEREYQKRRPPKMTGSPTLVKNMISGLSYGA-LNASYQAAL
520 530 540 550 560 570
580 590 600 610 620 630
pF1KB6 AENSIPLYTTASMGNP-TLGNLASAIREELNGAMEHTNSNESDSSPGRSPMQAVHPVHVK
::.:.:: .. .: :: . ..: ...... .: :: :.: : :: : : :.::
CCDS34 AESSFPLLNSPGMLNPGSASSLLPLSHDDVGAPVEPLPSNGSSSPPRLSPPQYSHQVQVK
580 590 600 610 620 630
640 650 660 670
pF1KB6 EEPLDPEEAEGPLSLVTTANHSPDFD-HDRDYEDEPVNEDME
::: . :: . : . . : : . .::: :.: .:..
CCDS34 EEPAEAEEDRQPGPPLGAPNPSASGPPEDRDLEEELPGEELS
640 650 660 670 680
677 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 14:24:33 2016 done: Sat Nov 5 14:24:34 2016
Total Scan time: 3.560 Total Display time: 0.240
Function used was FASTA [36.3.4 Apr, 2011]