Result of FASTA (ccds) for
pF1KB6315
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6315, 259 aa
1>>>pF1KB6315 259 - 259 aa - 259 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3634+/-0.000901; mu= 14.5071+/- 0.054
mean_var=66.9145+/-13.156, 0's: 0 Z-trim(105.0): 19 B-trim: 51 in 1/50
Lambda= 0.156789
statistics sampled from 8176 (8191) to 8176 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.634), E-opt: 0.2 (0.252), width: 16
Scan time: 2.190
The best scores are: opt bits E(32554)
CCDS3240.1 DCUN1D1 gene_id:54165|Hs108|chr3 ( 259) 1753 405.4 2.1e-113
CCDS77862.1 DCUN1D1 gene_id:54165|Hs108|chr3 ( 244) 1658 383.9 5.8e-107
CCDS32013.1 DCUN1D2 gene_id:55208|Hs108|chr13 ( 259) 1459 338.9 2.2e-93
CCDS10592.1 DCUN1D3 gene_id:123879|Hs108|chr16 ( 304) 564 136.4 2.2e-32
CCDS8325.1 DCUN1D5 gene_id:84259|Hs108|chr11 ( 237) 484 118.3 4.9e-27
CCDS33982.1 DCUN1D4 gene_id:23142|Hs108|chr4 ( 292) 466 114.3 9.8e-26
CCDS75123.1 DCUN1D4 gene_id:23142|Hs108|chr4 ( 336) 466 114.3 1.1e-25
CCDS3487.2 DCUN1D4 gene_id:23142|Hs108|chr4 ( 257) 260 67.6 9.4e-12
>>CCDS3240.1 DCUN1D1 gene_id:54165|Hs108|chr3 (259 aa)
initn: 1753 init1: 1753 opt: 1753 Z-score: 2149.6 bits: 405.4 E(32554): 2.1e-113
Smith-Waterman score: 1753; 100.0% identity (100.0% similar) in 259 aa overlap (1-259:1-259)
10 20 30 40 50 60
pF1KB6 MNKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MNKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 DRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 DRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 EFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 EFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 YWNLVLNGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFSTMIADDMSNYDEEGAWPVLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 YWNLVLNGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFSTMIADDMSNYDEEGAWPVLI
190 200 210 220 230 240
250
pF1KB6 DDFVEFARPQIAGTKSTTV
:::::::::::::::::::
CCDS32 DDFVEFARPQIAGTKSTTV
250
>>CCDS77862.1 DCUN1D1 gene_id:54165|Hs108|chr3 (244 aa)
initn: 1658 init1: 1658 opt: 1658 Z-score: 2033.8 bits: 383.9 E(32554): 5.8e-107
Smith-Waterman score: 1658; 100.0% identity (100.0% similar) in 244 aa overlap (16-259:1-244)
10 20 30 40 50 60
pF1KB6 MNKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL
:::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL
10 20 30 40
70 80 90 100 110 120
pF1KB6 DRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 DRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQ
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB6 EFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 EFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIA
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB6 YWNLVLNGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFSTMIADDMSNYDEEGAWPVLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 YWNLVLNGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFSTMIADDMSNYDEEGAWPVLI
170 180 190 200 210 220
250
pF1KB6 DDFVEFARPQIAGTKSTTV
:::::::::::::::::::
CCDS77 DDFVEFARPQIAGTKSTTV
230 240
>>CCDS32013.1 DCUN1D2 gene_id:55208|Hs108|chr13 (259 aa)
initn: 1496 init1: 1451 opt: 1459 Z-score: 1790.2 bits: 338.9 E(32554): 2.2e-93
Smith-Waterman score: 1459; 78.2% identity (94.9% similar) in 257 aa overlap (1-257:1-257)
10 20 30 40 50 60
pF1KB6 MNKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL
:.:::::::::::::: ::..:.::. ::.::.:.:: :::.:::::. :::.....
CCDS32 MHKLKSSQKDKVRQFMACTQAGERTAIYCLTQNEWRLDEATDSFFQNPDSLHRESMRNAV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 DRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQ
:.::::.::.::::::::::::.::::::::::.:::::::::.::::::::::::::..
CCDS32 DKKKLERLYGRYKDPQDENKIGVDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSRK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 EFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIA
::.::::::::::.::::: .:..:::::. ..:::::::::.:::::::::::::::.:
CCDS32 EFLDGMTELGCDSMEKLKALLPRLEQELKDTAKFKDFYQFTFTFAKNPGQKGLDLEMAVA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 YWNLVLNGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFSTMIADDMSNYDEEGAWPVLI
::.:::.:::::::::: ::.::::::::.:::::::::..:::::::::::::::::::
CCDS32 YWKLVLSGRFKFLDLWNTFLMEHHKRSIPRDTWNLLLDFGNMIADDMSNYDEEGAWPVLI
190 200 210 220 230 240
250
pF1KB6 DDFVEFARPQIAGTKSTTV
:::::.::: ..: : .
CCDS32 DDFVEYARPVVTGGKRSLF
250
>>CCDS10592.1 DCUN1D3 gene_id:123879|Hs108|chr16 (304 aa)
initn: 556 init1: 295 opt: 564 Z-score: 695.0 bits: 136.4 E(32554): 2.2e-32
Smith-Waterman score: 564; 43.9% identity (77.2% similar) in 189 aa overlap (63-246:89-276)
40 50 60 70 80 90
pF1KB6 NDWKLDVATDNFFQNPELYIRESVKGSLDRKKLEQLYNRYKDPQDENKIGIDGIQQFCDD
..::.:. :::: . :. : .:...::.:
CCDS10 AEAATEACQLPTSSGDAGRESKSNAEESSLQRLEELFRRYKDER-EDAILEEGMERFCND
60 70 80 90 100 110
100 110 120 130 140 150
pF1KB6 LALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELGCDSIEKLKAQIPKMEQELKEPG
: .::. . ::..::::.:::.:.:...::.:: .. :::. . :..:.. : :.
CCDS10 LCVDPTEFRVLLLAWKFQAATMCKFTRKEFFDGCKAISADSIDGICARFPSLLTEAKQED
120 130 140 150 160 170
160 170 180 190 200
pF1KB6 RFKDFYQFTFNFA--KNPGQKGLDLEMAIAYWNLVLN-GRFKFLDLWNKFLLEHHK--RS
.:::.:.:::.:. .. ::..: :.::: :.::.. . :: : .:: :. . ..
CCDS10 KFKDLYRFTFQFGLDSEEGQRSLHREIAIALWKLVFTQNNPPVLDQWLNFLTENPSGIKG
180 190 200 210 220 230
210 220 230 240 250
pF1KB6 IPKDTWNLLLDFSTMIADDMSNYDEEGAWPVLIDDFVEFARPQIAGTKSTTV
: .::::..:.:. .:. :.:::.:. ::: :.: :::.
CCDS10 ISRDTWNMFLNFTQVIGPDLSNYSEDEAWPSLFDTFVEWEMERRKREGEGRGALSSGPEG
240 250 260 270 280 290
CCDS10 LCPEEQT
300
>>CCDS8325.1 DCUN1D5 gene_id:84259|Hs108|chr11 (237 aa)
initn: 481 init1: 450 opt: 484 Z-score: 598.9 bits: 118.3 E(32554): 4.9e-27
Smith-Waterman score: 484; 36.0% identity (73.7% similar) in 186 aa overlap (63-248:49-232)
40 50 60 70 80 90
pF1KB6 NDWKLDVATDNFFQNPELYIRESVKGSLDRKKLEQLYNRYKDPQDENKIGIDGIQQFCDD
:: . .: : :: .: .:...::.:
CCDS83 DGGLKKCKISSYCRSQPPARLISGEEHFSSKKCLAWFYEYAGP-DEV-VGPEGMEKFCED
20 30 40 50 60 70
100 110 120 130 140 150
pF1KB6 LALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELGCDSIEKLKAQIPKMEQELKEPG
....: .: .:..:::..: .. :.:.:.. ::: : :: :::. .. ....:.. .
CCDS83 IGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQNKFDFLRSQLNDIS
80 90 100 110 120 130
160 170 180 190 200 210
pF1KB6 RFKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVLNGRFKFLDLWNKFLLEHHKRSIPKDT
::..:...:.::.. :..::.. : .. :.:. . ..... ..: . . : . ::
CCDS83 SFKNIYRYAFDFARDKDQRSLDIDTAKSMLALLLGRTWPLFSVFYQYLEQSKYRVMNKDQ
140 150 160 170 180 190
220 230 240 250
pF1KB6 WNLLLDFSTMIADDMSNYDEEGAWPVLIDDFVEFARPQIAGTKSTTV
: .:.:: . :.:::::.::::::.:.:::. .
CCDS83 WYNVLEFSRTVHADLSNYDEDGAWPVLLDEFVEWQKVRQTS
200 210 220 230
>>CCDS33982.1 DCUN1D4 gene_id:23142|Hs108|chr4 (292 aa)
initn: 462 init1: 435 opt: 466 Z-score: 575.5 bits: 114.3 E(32554): 9.8e-26
Smith-Waterman score: 466; 35.4% identity (71.4% similar) in 189 aa overlap (62-250:104-289)
40 50 60 70 80 90
pF1KB6 QNDWKLDVATDNFFQNPELYIRESVKGSLDRKKLEQLYNRYKDPQDENKIGIDGIQQFCD
.. :: .:. : .: .: .:...::.
CCDS33 DLSAKKSRHDSMYRKYDSTRIKTEEEAFSSKRCLEWFYE-YAGTDDV--VGPEGMEKFCE
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB6 DLALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELGCDSIEKLKAQIPKMEQELKEP
:....: .. .:..:::. : .. :. ::.. ::: : ::. :::. . ... :..
CCDS33 DIGVEPENVVMLVLAWKLDAQNMGYFTLQEWLKGMTSLQCDTTEKLRNTLDYLRSFLNDS
140 150 160 170 180 190
160 170 180 190 200 210
pF1KB6 GRFKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVLNGRFKFLDLWNKFLLEHHKRSIPKD
:: .:...:.::.. :..::.. : . .:.:. . .. ....:: . . . : ::
CCDS33 TNFKLIYRYAFDFAREKDQRSLDINTAKCMLGLLLGKIWPLFPVFHQFLEQSKYKVINKD
200 210 220 230 240 250
220 230 240 250
pF1KB6 TWNLLLDFSTMIADDMSNYDEEGAWPVLIDDFVEFARPQIAGTKSTTV
: .:.:: : :.:::::.::::::.:.:::. . .
CCDS33 QWCNVLEFSRTINLDLSNYDEDGAWPVLLDEFVEWYKDKQMS
260 270 280 290
>>CCDS75123.1 DCUN1D4 gene_id:23142|Hs108|chr4 (336 aa)
initn: 462 init1: 435 opt: 466 Z-score: 574.6 bits: 114.3 E(32554): 1.1e-25
Smith-Waterman score: 466; 35.4% identity (71.4% similar) in 189 aa overlap (62-250:148-333)
40 50 60 70 80 90
pF1KB6 QNDWKLDVATDNFFQNPELYIRESVKGSLDRKKLEQLYNRYKDPQDENKIGIDGIQQFCD
.. :: .:. : .: .: .:...::.
CCDS75 DLSAKKSRHDSMYRKYDSTRIKTEEEAFSSKRCLEWFYE-YAGTDDV--VGPEGMEKFCE
120 130 140 150 160 170
100 110 120 130 140 150
pF1KB6 DLALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELGCDSIEKLKAQIPKMEQELKEP
:....: .. .:..:::. : .. :. ::.. ::: : ::. :::. . ... :..
CCDS75 DIGVEPENVVMLVLAWKLDAQNMGYFTLQEWLKGMTSLQCDTTEKLRNTLDYLRSFLNDS
180 190 200 210 220 230
160 170 180 190 200 210
pF1KB6 GRFKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVLNGRFKFLDLWNKFLLEHHKRSIPKD
:: .:...:.::.. :..::.. : . .:.:. . .. ....:: . . . : ::
CCDS75 TNFKLIYRYAFDFAREKDQRSLDINTAKCMLGLLLGKIWPLFPVFHQFLEQSKYKVINKD
240 250 260 270 280 290
220 230 240 250
pF1KB6 TWNLLLDFSTMIADDMSNYDEEGAWPVLIDDFVEFARPQIAGTKSTTV
: .:.:: : :.:::::.::::::.:.:::. . .
CCDS75 QWCNVLEFSRTINLDLSNYDEDGAWPVLLDEFVEWYKDKQMS
300 310 320 330
>>CCDS3487.2 DCUN1D4 gene_id:23142|Hs108|chr4 (257 aa)
initn: 405 init1: 222 opt: 260 Z-score: 324.5 bits: 67.6 E(32554): 9.4e-12
Smith-Waterman score: 347; 32.3% identity (59.3% similar) in 189 aa overlap (62-250:104-254)
40 50 60 70 80 90
pF1KB6 QNDWKLDVATDNFFQNPELYIRESVKGSLDRKKLEQLYNRYKDPQDENKIGIDGIQQFCD
.. :: .:. : .: .: .:...::.
CCDS34 DLSAKKSRHDSMYRKYDSTRIKTEEEAFSSKRCLEWFYE-YAGTDDV--VGPEGMEKFCE
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB6 DLALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELGCDSIEKLKAQIPKMEQELKEP
:....: .. .:..:::. : .. :. ::.. ::: : ::. :::. . ... :..
CCDS34 DIGVEPENVVMLVLAWKLDAQNMGYFTLQEWLKGMTSLQCDTTEKLRNTLDYLRSFLNDS
140 150 160 170 180 190
160 170 180 190 200 210
pF1KB6 GRFKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVLNGRFKFLDLWNKFLLEHHKRSIPKD
:: .:...:.::.. : :.: ::
CCDS34 TNFKLIYRYAFDFARQSKYK-------------VIN----------------------KD
200 210
220 230 240 250
pF1KB6 TWNLLLDFSTMIADDMSNYDEEGAWPVLIDDFVEFARPQIAGTKSTTV
: .:.:: : :.:::::.::::::.:.:::. . .
CCDS34 QWCNVLEFSRTINLDLSNYDEDGAWPVLLDEFVEWYKDKQMS
220 230 240 250
259 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 16:36:52 2016 done: Sat Nov 5 16:36:52 2016
Total Scan time: 2.190 Total Display time: -0.030
Function used was FASTA [36.3.4 Apr, 2011]