Result of FASTA (ccds) for
pF1KB6338
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6338, 290 aa
1>>>pF1KB6338 290 - 290 aa - 290 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8540+/-0.000915; mu= 12.0981+/- 0.054
mean_var=83.7343+/-17.287, 0's: 0 Z-trim(107.0): 71 B-trim: 0 in 0/53
Lambda= 0.140160
statistics sampled from 9230 (9301) to 9230 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.666), E-opt: 0.2 (0.286), width: 16
Scan time: 2.510
The best scores are: opt bits E(32554)
CCDS1232.1 FCGR3A gene_id:2214|Hs108|chr1 ( 290) 1971 408.4 3.2e-114
CCDS58040.1 FCGR3B gene_id:2215|Hs108|chr1 ( 269) 1759 365.5 2.4e-101
CCDS44266.1 FCGR3A gene_id:2214|Hs108|chr1 ( 254) 1724 358.4 3.1e-99
CCDS41433.1 FCGR3B gene_id:2215|Hs108|chr1 ( 233) 1523 317.7 4.9e-87
CCDS72961.1 FCGR3B gene_id:2215|Hs108|chr1 ( 216) 1416 296.1 1.5e-80
CCDS44264.1 FCGR2A gene_id:2212|Hs108|chr1 ( 317) 638 138.9 4.7e-33
CCDS30922.1 FCGR2A gene_id:2212|Hs108|chr1 ( 316) 631 137.5 1.2e-32
CCDS72845.1 FCGR1B gene_id:2210|Hs108|chr1 ( 280) 599 131.0 1e-30
CCDS30925.1 FCGR2B gene_id:2213|Hs108|chr1 ( 291) 593 129.8 2.4e-30
CCDS30924.1 FCGR2B gene_id:2213|Hs108|chr1 ( 310) 593 129.8 2.5e-30
CCDS72960.1 FCGR3B gene_id:2215|Hs108|chr1 ( 130) 585 127.9 3.8e-30
CCDS53414.1 FCGR2B gene_id:2213|Hs108|chr1 ( 303) 582 127.5 1.2e-29
CCDS933.1 FCGR1A gene_id:2209|Hs108|chr1 ( 374) 578 126.8 2.4e-29
CCDS72844.1 FCGR1B gene_id:2210|Hs108|chr1 ( 224) 555 122.0 4e-28
CCDS1184.1 FCER1A gene_id:2205|Hs108|chr1 ( 257) 548 120.6 1.2e-27
CCDS72962.1 FCRLB gene_id:127943|Hs108|chr1 ( 275) 394 89.5 3e-18
CCDS1165.1 FCRL5 gene_id:83416|Hs108|chr1 ( 977) 400 91.0 3.6e-18
CCDS72963.1 FCRLB gene_id:127943|Hs108|chr1 ( 318) 393 89.3 3.8e-18
CCDS30927.1 FCRLB gene_id:127943|Hs108|chr1 ( 426) 394 89.6 4.3e-18
CCDS72964.1 FCRLB gene_id:127943|Hs108|chr1 ( 268) 361 82.8 3e-16
CCDS72965.1 FCRLB gene_id:127943|Hs108|chr1 ( 311) 360 82.7 3.9e-16
CCDS72846.1 FCGR1B gene_id:2210|Hs108|chr1 ( 188) 298 70.0 1.5e-12
CCDS1167.1 FCRL3 gene_id:115352|Hs108|chr1 ( 734) 298 70.3 4.6e-12
CCDS81385.1 FCRL3 gene_id:115352|Hs108|chr1 ( 742) 298 70.3 4.7e-12
CCDS1166.1 FCRL4 gene_id:83417|Hs108|chr1 ( 515) 288 68.2 1.4e-11
>>CCDS1232.1 FCGR3A gene_id:2214|Hs108|chr1 (290 aa)
initn: 1971 init1: 1971 opt: 1971 Z-score: 2164.2 bits: 408.4 E(32554): 3.2e-114
Smith-Waterman score: 1971; 99.7% identity (99.7% similar) in 290 aa overlap (1-290:1-290)
10 20 30 40 50 60
pF1KB6 MGGGAGERLFTSSCLVGLVPLGLRISLVTCPLQCGIMWQLLLPTALLLLVSAGMRTEDLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MGGGAGERLFTSSCLVGLVPLGLRISLVTCPLQCGIMWQLLLPTALLLLVSAGMRTEDLP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 KAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVDDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 KAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVDDS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 GEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 GEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 GKGRKYFHHNSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVNITITQGLAVSTISSFFP
::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::
CCDS12 GKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKNVSSETVNITITQGLAVSTISSFFP
190 200 210 220 230 240
250 260 270 280 290
pF1KB6 PGYQVSFCLVMVLLFAVDTGLYFSVKTNIRSSTRDWKDHKFKWRKDPQDK
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 PGYQVSFCLVMVLLFAVDTGLYFSVKTNIRSSTRDWKDHKFKWRKDPQDK
250 260 270 280 290
>>CCDS58040.1 FCGR3B gene_id:2215|Hs108|chr1 (269 aa)
initn: 1759 init1: 1759 opt: 1759 Z-score: 1933.0 bits: 365.5 E(32554): 2.4e-101
Smith-Waterman score: 1759; 97.0% identity (98.5% similar) in 269 aa overlap (1-269:1-269)
10 20 30 40 50 60
pF1KB6 MGGGAGERLFTSSCLVGLVPLGLRISLVTCPLQCGIMWQLLLPTALLLLVSAGMRTEDLP
::::.:::::: ::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MGGGTGERLFTPSCLVGLVPLGLRISLVTCPLQCGIMWQLLLPTALLLLVSAGMRTEDLP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 KAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVDDS
::::::::::: ::::::::::::::::::::::::::::.::::::::::::::::.::
CCDS58 KAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNENLISSQASSYFIDAATVNDS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 GEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 GKGRKYFHHNSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVNITITQGLAVSTISSFFP
:: ::::::::::.:::::::::::::::::::::::::::::::::::::::::::: :
CCDS58 GKDRKYFHHNSDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNITITQGLAVSTISSFSP
190 200 210 220 230 240
250 260 270 280 290
pF1KB6 PGYQVSFCLVMVLLFAVDTGLYFSVKTNIRSSTRDWKDHKFKWRKDPQDK
:::::::::::::::::::::::::::::
CCDS58 PGYQVSFCLVMVLLFAVDTGLYFSVKTNI
250 260
>>CCDS44266.1 FCGR3A gene_id:2214|Hs108|chr1 (254 aa)
initn: 1724 init1: 1724 opt: 1724 Z-score: 1895.1 bits: 358.4 E(32554): 3.1e-99
Smith-Waterman score: 1724; 99.6% identity (99.6% similar) in 254 aa overlap (37-290:1-254)
10 20 30 40 50 60
pF1KB6 ERLFTSSCLVGLVPLGLRISLVTCPLQCGIMWQLLLPTALLLLVSAGMRTEDLPKAVVFL
::::::::::::::::::::::::::::::
CCDS44 MWQLLLPTALLLLVSAGMRTEDLPKAVVFL
10 20 30
70 80 90 100 110 120
pF1KB6 EPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVDDSGEYRCQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 EPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVDDSGEYRCQ
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB6 TNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 TNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKY
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB6 FHHNSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVNITITQGLAVSTISSFFPPGYQVS
::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::
CCDS44 FHHNSDFYIPKATLKDSGSYFCRGLFGSKNVSSETVNITITQGLAVSTISSFFPPGYQVS
160 170 180 190 200 210
250 260 270 280 290
pF1KB6 FCLVMVLLFAVDTGLYFSVKTNIRSSTRDWKDHKFKWRKDPQDK
::::::::::::::::::::::::::::::::::::::::::::
CCDS44 FCLVMVLLFAVDTGLYFSVKTNIRSSTRDWKDHKFKWRKDPQDK
220 230 240 250
>>CCDS41433.1 FCGR3B gene_id:2215|Hs108|chr1 (233 aa)
initn: 1523 init1: 1523 opt: 1523 Z-score: 1676.0 bits: 317.7 E(32554): 4.9e-87
Smith-Waterman score: 1523; 97.4% identity (98.7% similar) in 233 aa overlap (37-269:1-233)
10 20 30 40 50 60
pF1KB6 ERLFTSSCLVGLVPLGLRISLVTCPLQCGIMWQLLLPTALLLLVSAGMRTEDLPKAVVFL
::::::::::::::::::::::::::::::
CCDS41 MWQLLLPTALLLLVSAGMRTEDLPKAVVFL
10 20 30
70 80 90 100 110 120
pF1KB6 EPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVDDSGEYRCQ
::::: ::::::::::::::::::::::::::::.::::::::::::::::.::::::::
CCDS41 EPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNENLISSQASSYFIDAATVNDSGEYRCQ
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB6 TNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKY
:::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::
CCDS41 TNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKY
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB6 FHHNSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVNITITQGLAVSTISSFFPPGYQVS
:::::::.:::::::::::::::::::::::::::::::::::::::::::: :::::::
CCDS41 FHHNSDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNITITQGLAVSTISSFSPPGYQVS
160 170 180 190 200 210
250 260 270 280 290
pF1KB6 FCLVMVLLFAVDTGLYFSVKTNIRSSTRDWKDHKFKWRKDPQDK
:::::::::::::::::::::::
CCDS41 FCLVMVLLFAVDTGLYFSVKTNI
220 230
>>CCDS72961.1 FCGR3B gene_id:2215|Hs108|chr1 (216 aa)
initn: 1416 init1: 1416 opt: 1416 Z-score: 1559.6 bits: 296.1 E(32554): 1.5e-80
Smith-Waterman score: 1416; 97.2% identity (98.6% similar) in 216 aa overlap (54-269:1-216)
30 40 50 60 70 80
pF1KB6 RISLVTCPLQCGIMWQLLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKC
:::::::::::::::::: :::::::::::
CCDS72 MRTEDLPKAVVFLEPQWYSVLEKDSVTLKC
10 20 30
90 100 110 120 130 140
pF1KB6 QGAYSPEDNSTQWFHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIG
:::::::::::::::::.::::::::::::::::.:::::::::::::::::::::::::
CCDS72 QGAYSPEDNSTQWFHNENLISSQASSYFIDAATVNDSGEYRCQTNLSTLSDPVQLEVHIG
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB6 WLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDS
::::::::::::::::::::::::::::::::::::::: ::::::::::.:::::::::
CCDS72 WLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYFHHNSDFHIPKATLKDS
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB6 GSYFCRGLVGSKNVSSETVNITITQGLAVSTISSFFPPGYQVSFCLVMVLLFAVDTGLYF
::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::
CCDS72 GSYFCRGLVGSKNVSSETVNITITQGLAVSTISSFSPPGYQVSFCLVMVLLFAVDTGLYF
160 170 180 190 200 210
270 280 290
pF1KB6 SVKTNIRSSTRDWKDHKFKWRKDPQDK
::::::
CCDS72 SVKTNI
>>CCDS44264.1 FCGR2A gene_id:2212|Hs108|chr1 (317 aa)
initn: 682 init1: 598 opt: 638 Z-score: 706.9 bits: 138.9 E(32554): 4.7e-33
Smith-Waterman score: 638; 43.1% identity (67.5% similar) in 255 aa overlap (24-275:6-252)
10 20 30 40 50
pF1KB6 MGGGAGERLFTSSCLVGLVPLGLRISLVTCPLQCGIMWQLLLP-TALLLLVSAGMRTEDL
..: .:: . .: :: : :.::::.:: ..
CCDS44 MTMETQMSQNVCPRN---LW-LLQPLTVLLLLASADSQAAAP
10 20 30
60 70 80 90 100 110
pF1KB6 PKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVDD
::::. ::: : ::..::::: :::: :::..: ::::: .:: .... . :. .:
CCDS44 PKAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQPSYRFKANNND
40 50 60 70 80 90
120 130 140 150 160 170
pF1KB6 SGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQ
:::: :::. ..:::::.: : ::.::.:. :.: . : :::::::. : :::..:
CCDS44 SGEYTCQTGQTSLSDPVHLTVLSEWLVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQ
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB6 NGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVNITITQGLAVSTISSFF
:::..:. : . : ::.:. . ::.: : : .: ::. :.::. : ...:
CCDS44 NGKSQKFSHLDPTFSIPQANHSHSGDYHCTGNIGYTLFSSKPVTITVQ----VPSMGSSS
160 170 180 190 200 210
240 250 260 270 280 290
pF1KB6 PPGYQVSFCLVMVL--LFAVDTGLYFSVKTNIRSSTRDWKDHKFKWRKDPQDK
: : :. .. .. . :. ..: . : : ... :
CCDS44 PMGIIVAVVIATAVAAIVAAVVALIYCRKKRISANSTDPVKAAQFEPPGRQMIAIRKRQL
220 230 240 250 260 270
CCDS44 EETNNDYETADGGYMTLNPRAPTDDDKNIYLTLPPNDHVNSNN
280 290 300 310
>>CCDS30922.1 FCGR2A gene_id:2212|Hs108|chr1 (316 aa)
initn: 705 init1: 600 opt: 631 Z-score: 699.3 bits: 137.5 E(32554): 1.2e-32
Smith-Waterman score: 631; 43.1% identity (67.5% similar) in 255 aa overlap (24-275:6-251)
10 20 30 40 50
pF1KB6 MGGGAGERLFTSSCLVGLVPLGLRISLVTCPLQCGIMWQLLLP-TALLLLVSAGMRTEDL
..: .:: . .: :: : :.::::.:: ..
CCDS30 MTMETQMSQNVCPRN---LW-LLQPLTVLLLLASADSQAAP-
10 20 30
60 70 80 90 100 110
pF1KB6 PKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVDD
::::. ::: : ::..::::: :::: :::..: ::::: .:: .... . :. .:
CCDS30 PKAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQPSYRFKANNND
40 50 60 70 80 90
120 130 140 150 160 170
pF1KB6 SGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQ
:::: :::. ..:::::.: : ::.::.:. :.: . : :::::::. : :::..:
CCDS30 SGEYTCQTGQTSLSDPVHLTVLSEWLVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQ
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB6 NGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVNITITQGLAVSTISSFF
:::..:. : . : ::.:. . ::.: : : .: ::. :.::. : ...:
CCDS30 NGKSQKFSHLDPTFSIPQANHSHSGDYHCTGNIGYTLFSSKPVTITVQ----VPSMGSSS
160 170 180 190 200 210
240 250 260 270 280 290
pF1KB6 PPGYQVSFCLVMVL--LFAVDTGLYFSVKTNIRSSTRDWKDHKFKWRKDPQDK
: : :. .. .. . :. ..: . : : ... :
CCDS30 PMGIIVAVVIATAVAAIVAAVVALIYCRKKRISANSTDPVKAAQFEPPGRQMIAIRKRQL
220 230 240 250 260 270
CCDS30 EETNNDYETADGGYMTLNPRAPTDDDKNIYLTLPPNDHVNSNN
280 290 300 310
>>CCDS72845.1 FCGR1B gene_id:2210|Hs108|chr1 (280 aa)
initn: 572 init1: 529 opt: 599 Z-score: 665.1 bits: 131.0 E(32554): 1e-30
Smith-Waterman score: 599; 39.2% identity (69.2% similar) in 240 aa overlap (37-276:1-229)
10 20 30 40 50 60
pF1KB6 ERLFTSSCLVGLVPLGLRISLVTCPLQCGIMWQLLLPTALLLLVSAGMRTEDLPKAVVFL
:: : :.::: : . .. : :::. :
CCDS72 MWFL---TTLLLWVPVDGQV-DTTKAVITL
10 20
70 80 90 100 110 120
pF1KB6 EPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVDDSGEYRCQ
.: : :......::.:. . : ..::::: : . .... :: : .:.:.::::::::
CCDS72 QPPWVSVFQEETITLHCEVLHLPGSSSTQWFLNGTATQTSTPSYRITSASVNDSGEYRCQ
30 40 50 60 70 80
130 140 150 160 170 180
pF1KB6 TNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKY
.:: :::.:::.: ::::::. :: : .:. ::::.::. ...: : .:::. :.
CCDS72 RGLSGRSDPIQLEIHRGWLLLQVSSRVFMEGEPLALRCHAWKDKLVYNVLYYRNGKAFKF
90 100 110 120 130 140
190 200 210 220 230 240
pF1KB6 FHHNSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVNITITQGLAVSTISSFFPPGYQVS
:: ::.. : :.... .:.: : :. :.. .: .. ..:: . : : ..:
CCDS72 FHWNSNLTILKTNISHNGTYHCSGM-GKHRYTSAGISQYTVKGLQLPT-----PVWFHVL
150 160 170 180 190 200
250 260 270 280 290
pF1KB6 FCLVMVLLFAVDTGLYFSVKTNIRSSTRDWKDHKFKWRKDPQDK
: :.. ..: :.: :. ... ... . . :
CCDS72 FYLAVGIMFLVNTVLWVTIRKELKRKKK-WNLEISLDSGHEKKVISSLQEDRHLEEELKC
210 220 230 240 250
>>CCDS30925.1 FCGR2B gene_id:2213|Hs108|chr1 (291 aa)
initn: 619 init1: 586 opt: 593 Z-score: 658.3 bits: 129.8 E(32554): 2.4e-30
Smith-Waterman score: 593; 47.9% identity (73.7% similar) in 190 aa overlap (38-226:25-214)
10 20 30 40 50 60
pF1KB6 RLFTSSCLVGLVPLGLRISLVTCPLQCGIMW-QLLLPTALLLLVSAGMRTEDLPKAVVFL
: ..:: ::.:.:. .. ::::. :
CCDS30 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLAPVAGTPAAPPKAVLKL
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 EPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVDDSGEYRCQ
:::: ::..::::: :.:..:::..: ::::: .:: .... . :. .::::: ::
CCDS30 EPQWINVLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQ
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 TNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKY
:. ..:::::.: : ::.::.:. :.: . : :::::::. : :::..::::..:.
CCDS30 TGQTSLSDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKF
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB6 FHHNSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVNITITQGLAVSTISSFFPPGYQVS
. . .: ::.:. . ::.: : : .: ::. :.::.
CCDS30 SRSDPNFSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAV
180 190 200 210 220 230
250 260 270 280 290
pF1KB6 FCLVMVLLFAVDTGLYFSVKTNIRSSTRDWKDHKFKWRKDPQDK
CCDS30 AAIVAAVVALIYCRKKRISANPTNPDEADKVGAENTITYSLLMHPDALEEPDDQNRI
240 250 260 270 280 290
>>CCDS30924.1 FCGR2B gene_id:2213|Hs108|chr1 (310 aa)
initn: 638 init1: 586 opt: 593 Z-score: 657.9 bits: 129.8 E(32554): 2.5e-30
Smith-Waterman score: 593; 47.9% identity (73.7% similar) in 190 aa overlap (38-226:25-214)
10 20 30 40 50 60
pF1KB6 RLFTSSCLVGLVPLGLRISLVTCPLQCGIMW-QLLLPTALLLLVSAGMRTEDLPKAVVFL
: ..:: ::.:.:. .. ::::. :
CCDS30 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLAPVAGTPAAPPKAVLKL
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 EPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVDDSGEYRCQ
:::: ::..::::: :.:..:::..: ::::: .:: .... . :. .::::: ::
CCDS30 EPQWINVLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQ
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 TNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKY
:. ..:::::.: : ::.::.:. :.: . : :::::::. : :::..::::..:.
CCDS30 TGQTSLSDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKF
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB6 FHHNSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVNITITQGLAVSTISSFFPPGYQVS
. . .: ::.:. . ::.: : : .: ::. :.::.
CCDS30 SRSDPNFSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAV
180 190 200 210 220 230
250 260 270 280 290
pF1KB6 FCLVMVLLFAVDTGLYFSVKTNIRSSTRDWKDHKFKWRKDPQDK
CCDS30 AAIVAAVVALIYCRKKRISALPGYPECREMGETLPEKPANPTNPDEADKVGAENTITYSL
240 250 260 270 280 290
290 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 19:01:39 2016 done: Fri Nov 4 19:01:39 2016
Total Scan time: 2.510 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]