FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6360, 297 aa
  1>>>pF1KB6360 297 - 297 aa - 297 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.1662+/-0.000861; mu= 11.9205+/- 0.052
 mean_var=91.7790+/-18.503, 0's: 0 Z-trim(108.3): 10  B-trim: 0 in 0/51
 Lambda= 0.133876
 statistics sampled from 10089 (10093) to 10089 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.688), E-opt: 0.2 (0.31), width:  16
 Scan time:  2.250

The best scores are:                                      opt bits E(32554)
CCDS42907.1 C21orf91 gene_id:54149|Hs108|chr21     ( 297) 2015 399.0 2.1e-111
CCDS42908.1 C21orf91 gene_id:54149|Hs108|chr21     ( 296) 1997 395.6 2.4e-110
CCDS42909.1 C21orf91 gene_id:54149|Hs108|chr21     ( 221) 1526 304.5 4.5e-83


>>CCDS42907.1 C21orf91 gene_id:54149|Hs108|chr21          (297 aa)
 initn: 2015 init1: 2015 opt: 2015  Z-score: 2113.4  bits: 399.0 E(32554): 2.1e-111
Smith-Waterman score: 2015; 100.0% identity (100.0% similar) in 297 aa overlap (1-297:1-297)

               10        20        30        40        50        60
pF1KB6 MNEEEQFVNIDLNDDNICSVCKLGTDKETLSFCHICFELNIEGVPKSDLLHTKSLRGHKD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MNEEEQFVNIDLNDDNICSVCKLGTDKETLSFCHICFELNIEGVPKSDLLHTKSLRGHKD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 CFEKYHLIANQGCPRSKLSKSTYEEVKTILSKKINWIVQYAQNKDLDSDSECSKNPQHHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 CFEKYHLIANQGCPRSKLSKSTYEEVKTILSKKINWIVQYAQNKDLDSDSECSKNPQHHL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 FNFRHKPEEKLLPQFDSQVPKYSAKWIDGSAGGISNCTQRILEQRENTDFGLSMLQDSGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 FNFRHKPEEKLLPQFDSQVPKYSAKWIDGSAGGISNCTQRILEQRENTDFGLSMLQDSGA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 TLCRNSVLWPHSHNQAQKKEETISSPEANVQTQHPHYSREELNSMTLGEVEQLNAKLLQQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 TLCRNSVLWPHSHNQAQKKEETISSPEANVQTQHPHYSREELNSMTLGEVEQLNAKLLQQ
              190       200       210       220       230       240

              250       260       270       280       290       
pF1KB6 IQEVFEELTHQVQEKDSLASQLHVRHVAIEQLLKNCSKLPCLQVGRTGMKSHLPINN
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 IQEVFEELTHQVQEKDSLASQLHVRHVAIEQLLKNCSKLPCLQVGRTGMKSHLPINN
              250       260       270       280       290       

>>CCDS42908.1 C21orf91 gene_id:54149|Hs108|chr21          (296 aa)
 initn: 1651 init1: 1651 opt: 1997  Z-score: 2094.6  bits: 395.6 E(32554): 2.4e-110
Smith-Waterman score: 1997; 99.7% identity (99.7% similar) in 297 aa overlap (1-297:1-296)

               10        20        30        40        50        60
pF1KB6 MNEEEQFVNIDLNDDNICSVCKLGTDKETLSFCHICFELNIEGVPKSDLLHTKSLRGHKD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MNEEEQFVNIDLNDDNICSVCKLGTDKETLSFCHICFELNIEGVPKSDLLHTKSLRGHKD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 CFEKYHLIANQGCPRSKLSKSTYEEVKTILSKKINWIVQYAQNKDLDSDSECSKNPQHHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 CFEKYHLIANQGCPRSKLSKSTYEEVKTILSKKINWIVQYAQNKDLDSDSECSKNPQHHL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 FNFRHKPEEKLLPQFDSQVPKYSAKWIDGSAGGISNCTQRILEQRENTDFGLSMLQDSGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 FNFRHKPEEKLLPQFDSQVPKYSAKWIDGSAGGISNCTQRILEQRENTDFGLSMLQDSGA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 TLCRNSVLWPHSHNQAQKKEETISSPEANVQTQHPHYSREELNSMTLGEVEQLNAKLLQQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 TLCRNSVLWPHSHNQAQKKEETISSPEANVQTQHPHYSREELNSMTLGEVEQLNAKLLQQ
              190       200       210       220       230       240

              250       260       270       280       290       
pF1KB6 IQEVFEELTHQVQEKDSLASQLHVRHVAIEQLLKNCSKLPCLQVGRTGMKSHLPINN
       :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 IQ-VFEELTHQVQEKDSLASQLHVRHVAIEQLLKNCSKLPCLQVGRTGMKSHLPINN
               250       260       270       280       290      

>>CCDS42909.1 C21orf91 gene_id:54149|Hs108|chr21          (221 aa)
 initn: 1526 init1: 1526 opt: 1526  Z-score: 1604.8  bits: 304.5 E(32554): 4.5e-83
Smith-Waterman score: 1526; 100.0% identity (100.0% similar) in 221 aa overlap (1-221:1-221)

               10        20        30        40        50        60
pF1KB6 MNEEEQFVNIDLNDDNICSVCKLGTDKETLSFCHICFELNIEGVPKSDLLHTKSLRGHKD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MNEEEQFVNIDLNDDNICSVCKLGTDKETLSFCHICFELNIEGVPKSDLLHTKSLRGHKD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 CFEKYHLIANQGCPRSKLSKSTYEEVKTILSKKINWIVQYAQNKDLDSDSECSKNPQHHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 CFEKYHLIANQGCPRSKLSKSTYEEVKTILSKKINWIVQYAQNKDLDSDSECSKNPQHHL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 FNFRHKPEEKLLPQFDSQVPKYSAKWIDGSAGGISNCTQRILEQRENTDFGLSMLQDSGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 FNFRHKPEEKLLPQFDSQVPKYSAKWIDGSAGGISNCTQRILEQRENTDFGLSMLQDSGA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 TLCRNSVLWPHSHNQAQKKEETISSPEANVQTQHPHYSREELNSMTLGEVEQLNAKLLQQ
       :::::::::::::::::::::::::::::::::::::::::                   
CCDS42 TLCRNSVLWPHSHNQAQKKEETISSPEANVQTQHPHYSREE                   
              190       200       210       220                    

              250       260       270       280       290       
pF1KB6 IQEVFEELTHQVQEKDSLASQLHVRHVAIEQLLKNCSKLPCLQVGRTGMKSHLPINN




297 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 20:38:45 2016 done: Fri Nov  4 20:38:45 2016
 Total Scan time:  2.250 Total Display time: -0.030

Function used was FASTA [36.3.4 Apr, 2011]