Result of FASTA (ccds) for
pF1KB6373
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6373, 270 aa
1>>>pF1KB6373 270 - 270 aa - 270 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1075+/-0.000664; mu= 16.3684+/- 0.040
mean_var=69.1481+/-13.883, 0's: 0 Z-trim(110.5): 82 B-trim: 0 in 0/51
Lambda= 0.154235
statistics sampled from 11591 (11678) to 11591 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.724), E-opt: 0.2 (0.359), width: 16
Scan time: 2.330
The best scores are: opt bits E(32554)
CCDS12736.1 HSD17B14 gene_id:51171|Hs108|chr19 ( 270) 1776 403.6 7.3e-113
CCDS3663.1 BDH2 gene_id:56898|Hs108|chr4 ( 245) 388 94.8 6.4e-20
CCDS33375.1 PECR gene_id:55825|Hs108|chr2 ( 303) 389 95.1 6.5e-20
CCDS10409.1 DECR2 gene_id:26063|Hs108|chr16 ( 292) 384 93.9 1.4e-19
CCDS6250.1 DECR1 gene_id:1666|Hs108|chr8 ( 335) 355 87.5 1.3e-17
CCDS9605.1 DHRS4 gene_id:10901|Hs108|chr14 ( 278) 337 83.5 1.8e-16
CCDS9604.1 DHRS2 gene_id:10202|Hs108|chr14 ( 280) 324 80.6 1.4e-15
CCDS11799.1 DCXR gene_id:51181|Hs108|chr17 ( 244) 320 79.6 2.3e-15
CCDS3812.1 CBR4 gene_id:84869|Hs108|chr4 ( 237) 309 77.2 1.2e-14
CCDS41927.1 DHRS2 gene_id:10202|Hs108|chr14 ( 300) 303 75.9 3.7e-14
CCDS3821.1 HPGD gene_id:3248|Hs108|chr4 ( 266) 277 70.1 1.9e-12
CCDS10936.1 HSD17B2 gene_id:3294|Hs108|chr16 ( 387) 275 69.8 3.4e-12
CCDS2231.1 DHRS9 gene_id:10170|Hs108|chr2 ( 319) 274 69.5 3.4e-12
CCDS74600.1 DHRS9 gene_id:10170|Hs108|chr2 ( 379) 274 69.5 3.9e-12
CCDS4769.1 HSD17B8 gene_id:7923|Hs108|chr6 ( 261) 272 69.0 4e-12
CCDS3328.1 BDH1 gene_id:622|Hs108|chr3 ( 343) 265 67.5 1.4e-11
CCDS81810.1 DHRS7 gene_id:51635|Hs108|chr14 ( 289) 257 65.7 4.3e-11
CCDS9743.1 DHRS7 gene_id:51635|Hs108|chr14 ( 339) 257 65.7 4.9e-11
CCDS41797.1 RDH16 gene_id:8608|Hs108|chr12 ( 317) 253 64.8 8.6e-11
>>CCDS12736.1 HSD17B14 gene_id:51171|Hs108|chr19 (270 aa)
initn: 1776 init1: 1776 opt: 1776 Z-score: 2139.7 bits: 403.6 E(32554): 7.3e-113
Smith-Waterman score: 1776; 100.0% identity (100.0% similar) in 270 aa overlap (1-270:1-270)
10 20 30 40 50 60
pF1KB6 MATGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MATGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 CDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 CDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 LTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 CISPGNIWTPLWEELAALMPDPRATIREGMLAQPLGRMGQPAEVGAAAVFLASEANFCTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 CISPGNIWTPLWEELAALMPDPRATIREGMLAQPLGRMGQPAEVGAAAVFLASEANFCTG
190 200 210 220 230 240
250 260 270
pF1KB6 IELLVTGGAELGYGCKASRSTPVDAPDIPS
::::::::::::::::::::::::::::::
CCDS12 IELLVTGGAELGYGCKASRSTPVDAPDIPS
250 260 270
>>CCDS3663.1 BDH2 gene_id:56898|Hs108|chr4 (245 aa)
initn: 322 init1: 155 opt: 388 Z-score: 471.1 bits: 94.8 E(32554): 6.4e-20
Smith-Waterman score: 388; 32.7% identity (60.6% similar) in 251 aa overlap (6-251:3-245)
10 20 30 40 50 60
pF1KB6 MATGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFIL
: :::...:....::: . . ::. ::.:. : .:: . ::. :: .
CCDS36 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK-YPGIQTRV
10 20 30 40 50
70 80 90 100 110
pF1KB6 CDVTQEDDVKTLVSETIRRFGRLDCVVNNAG--HHPPPQRPEETSAQGFRQLLELNLLGT
:::.. .. ...:. ::: . : :: :: :: . : ..::. .
CCDS36 LDVTKKKQIDQFANEV----ERLDVLFNVAGFVHHGTVLDCEEKD-WDFS--MNLNVRSM
60 70 80 90 100
120 130 140 150 160 170
pF1KB6 YTLTKLALP-YLRKSQGNVINISSLVGAI-GQAQAVPYVATKGAVTAMTKALALDESPYG
: . : :: .: ...::.::.::..... : .. : .::.:: ..::..: : :
CCDS36 YLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQG
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB6 VRVNCISPGNIWTPLWEELAALMPDPRATIREGMLAQPLGRMGQPAEVGAAAVFLAS-EA
.: ::. ::.. :: .: .:. . . . : ::.. :.. :.::: :.
CCDS36 IRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDES
170 180 190 200 210 220
240 250 260 270
pF1KB6 NFCTGIELLVTGGAELGYGCKASRSTPVDAPDIPS
. :: ... :: :
CCDS36 AYVTGNPVIIDGGWSL
230 240
>>CCDS33375.1 PECR gene_id:55825|Hs108|chr2 (303 aa)
initn: 312 init1: 142 opt: 389 Z-score: 471.0 bits: 95.1 E(32554): 6.5e-20
Smith-Waterman score: 389; 32.8% identity (63.3% similar) in 256 aa overlap (9-251:18-267)
10 20 30 40
pF1KB6 MATGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKD----ESGGR
:.:..::::. ::: .::. ... :. ::: .. .:..
CCDS33 MASWAKGRSYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAAD
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB6 ALEQELPGA-----VFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAG-HHPPPQRPEE
:. .:: . . : :.. .:..:..::. :. ::... .:::.: . : :.
CCDS33 ELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSP--AEH
70 80 90 100 110
110 120 130 140 150 160
pF1KB6 TSAQGFRQLLELNLLGTYTLTKLALP-YLRKSQGNVINISSLVGAIGQAQAVPYVATKGA
:..:.. .:: :: ::. . : . .... :...:: . : : :: :....
CCDS33 ISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKA-GFPLAVHSGAARAG
120 130 140 150 160 170
170 180 190 200 210
pF1KB6 VTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRATIREGMLAQ-PLGRMG
: .::.:::. . :.:.::..:: :.. : . . .. :: . . : :.:
CCDS33 VYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQ---SFFEGSFQKIPAKRIG
180 190 200 210 220 230
220 230 240 250 260 270
pF1KB6 QPAEVGAAAVFLASEA-NFCTGIELLVTGGAELGYGCKASRSTPVDAPDIPS
: ::.... :: : : .: :: . : :: :
CCDS33 VPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLYTHSYEVPDHDNWPKGAGDLSVVKKMK
240 250 260 270 280 290
CCDS33 ETFKEKAKL
300
>>CCDS10409.1 DECR2 gene_id:26063|Hs108|chr16 (292 aa)
initn: 318 init1: 152 opt: 384 Z-score: 465.2 bits: 93.9 E(32554): 1.4e-19
Smith-Waterman score: 384; 32.1% identity (61.9% similar) in 252 aa overlap (10-253:29-275)
10 20 30 40
pF1KB6 MATGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDK
::. .:::: ::: :.. :. : ..:: ..
CCDS10 MAQPPPDVEGDDCLPAYRHLFCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASR
10 20 30 40 50 60
50 60 70 80 90
pF1KB6 DESGGRALEQELPGAVFILC-----DVTQEDDVKTLVSETIRRFGRLDCVVN-NAGHHPP
. . ..: ::. : :: : . :......:::.: ..: ::.
CCDS10 SLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLC
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB6 PQRPEETSAQGFRQLLELNLLGTYTLTK-LALPYLRKSQGNVINISSLVGAIGQAQAVPY
: : ..:. ..... ::..... : ..: : ..::.. .: ::: :
CCDS10 PAG--ALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHA
130 140 150 160 170
160 170 180 190 200 210
pF1KB6 VATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRATIREGMLAQP
..:.:: :::. ::.. .: ..::: ..:: : : : : :.:.. . :.:
CCDS10 GSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGT--EGLRRL-GGPQASLSTKVTASP
180 190 200 210 220 230
220 230 240 250 260 270
pF1KB6 LGRMGQPAEVGAAAVFLASE-ANFCTGIELLVTGGAELGYGCKASRSTPVDAPDIPS
: :.:. .:.. ....::: :.. :: :.. ::: : .
CCDS10 LQRLGNKTEIAHSVLYLASPLASYVTGAVLVADGGAWLTFPNGVKGLPDFASFSAKL
240 250 260 270 280 290
>>CCDS6250.1 DECR1 gene_id:1666|Hs108|chr8 (335 aa)
initn: 277 init1: 123 opt: 355 Z-score: 429.5 bits: 87.5 E(32554): 1.3e-17
Smith-Waterman score: 355; 29.9% identity (61.7% similar) in 261 aa overlap (1-251:51-305)
10 20 30
pF1KB6 MATGTRYAGKVVVVTGGGRGIGAGIVRAFV
: . . :::. .:::: :.: :.. .
CCDS62 PRRFFSYGTKILYQNTEALQSKFFSPLQKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLS
30 40 50 60 70 80
40 50 60 70 80
pF1KB6 NSGARVVICDKDESGGRALEQELPGAV-----FILCDVTQEDDVKTLVSETIRRFGRLDC
. ::. :: .. . .: ... . . : ::: . : :.. ::: :. :. .
CCDS62 SLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNI
90 100 110 120 130 140
90 100 110 120 130 140
pF1KB6 VVNNA-GHHPPPQRPEETSAQGFRQLLELNLLGTYTLT-KLALPYLRKSQGNV-INISSL
:.::: :. : :. : .... . .. : :: .: ... .. ..: . ..:...
CCDS62 VINNAAGNFISPT--ERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTI
150 160 170 180 190
150 160 170 180 190 200
pF1KB6 VGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDP
. :.. .:: ...:..: ::.:.:: . . ::.: : :.:: :. . : ::
CCDS62 YAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPG----PIKTKGAFSRLDP
200 210 220 230 240 250
210 220 230 240 250 260
pF1KB6 RATIREGMLAQ-PLGRMGQPAEVGAAAVFLASE-ANFCTGIELLVTGGAELGYGCKASRS
.:... :... : ::.: :.. :.:: :. :.. .: . :: :.
CCDS62 TGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDL
260 270 280 290 300 310
270
pF1KB6 TPVDAPDIPS
CCDS62 RKVTKEQWDTIEELIRKTKGS
320 330
>>CCDS9605.1 DHRS4 gene_id:10901|Hs108|chr14 (278 aa)
initn: 231 init1: 121 opt: 337 Z-score: 409.0 bits: 83.5 E(32554): 1.8e-16
Smith-Waterman score: 337; 28.3% identity (65.6% similar) in 247 aa overlap (8-248:31-273)
10 20 30
pF1KB6 MATGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVV
:.::..::.. ::: .:.: ....::.::
CCDS96 MHKAGLLGLCARAWNSVRMASSGMTRRDPLANKVALVTASTDGIGFAIARRLAQDGAHVV
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB6 ICD-KDESGGRA---LEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHH
. . :... .: :. : ... .: : . .: . ::. ... : .: .:.::. .
CCDS96 VSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVN
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB6 PPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAV-
: ... . . . :..:. . .:: ..: ..: :. . : : ..:.. . .
CCDS96 PFFGSIMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFS
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB6 PYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRATIREGMLA
:: ..: :. ..::.::.. .: ..::::..:: : : . .. . . . ...: .
CCDS96 PYNVSKTALLGLTKTLAIELAPRNIRVNCLAPGLIKTSF-SRMLWMDKEKEESMKETLRI
190 200 210 220 230
220 230 240 250 260 270
pF1KB6 QPLGRMGQPAEVGAAAVFLASE-ANFCTGIELLVTGGAELGYGCKASRSTPVDAPDIPS
. :.:.: . .. . :: :: :.. :: ..: ::
CCDS96 R---RLGEPEDCAGIVSFLCSEDASYITGETVVVGGGTPSRL
240 250 260 270
>>CCDS9604.1 DHRS2 gene_id:10202|Hs108|chr14 (280 aa)
initn: 304 init1: 226 opt: 324 Z-score: 393.3 bits: 80.6 E(32554): 1.4e-15
Smith-Waterman score: 324; 30.5% identity (64.2% similar) in 246 aa overlap (8-247:35-275)
10 20 30
pF1KB6 MATGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVV
:..:.::::. ::: .:.: .. .::.::
CCDS96 VARGYQGWFHPCARLSVRMSSTGIDRKGVLANRVAVVTGSTSGIGFAIARRLARDGAHVV
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB6 ICD-KDESGGRA---LEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHH
: . :... :: :. : ... :.: : . .: . ::...... : .: .: .:: .
CCDS96 ISSRKQQNVDRAMAKLQGEGLSVAGIVCHVGKAEDREQLVAKALEHCGGVDFLVCSAGVN
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB6 PPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVP
: :: : . ..: .:. . : . :::... .: :: .:: ..: . . :.
CCDS96 PLVGSTLGTSEQIWDKILSVNVKSPALLLSQLLPYMENRRGAVILVSS-IAAYNPVVALG
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB6 -YVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRATIREGMLA
: ..: :. ..:..:::. .: .::::. :: : : ... .. .. ..
CCDS96 VYNVSKTALLGLTRTLALELAPKDIRVNCVVPGIIKT----DFSKVFHGNESLWKNFKEH
190 200 210 220 230
220 230 240 250 260 270
pF1KB6 QPLGRMGQPAEVGAAAVFLAS-EANFCTGIELLVTGGAELGYGCKASRSTPVDAPDIPS
. : :.:. . .. . :: : .:.. .: .. :.:
CCDS96 HQLQRIGESEDCAGIVSFLCSPDASYVNGENIAVAGYSTRL
240 250 260 270 280
>>CCDS11799.1 DCXR gene_id:51181|Hs108|chr17 (244 aa)
initn: 283 init1: 137 opt: 320 Z-score: 389.4 bits: 79.6 E(32554): 2.3e-15
Smith-Waterman score: 320; 30.5% identity (61.0% similar) in 246 aa overlap (8-248:6-240)
10 20 30 40 50 60
pF1KB6 MATGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFIL
::. :.:::.:.::: : :.:. .::::: .. .. .: .: :: .
CCDS11 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVC
10 20 30 40 50
70 80 90 100 110
pF1KB6 CDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPE-ETSAQGFRQLLELNLLGTY
:. . . .. ... : .: .::::. .: :.. ..: . .:.:: ..
CCDS11 VDLGDWEATE----RALGSVGPVDLLVNNAA--VALLQPFLEVTKEAFDRSFEVNLRAVI
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 TLTKLALPYL--RKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGV
..... : : : ..:.:: . . .. : .::::. .::..::. .:. .
CCDS11 QVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKI
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB6 RVNCISPGNIWTPLWEELAALMPDPRATIREGMLAQ-PLGRMGQPAEVGAAAVFLASE-A
::: ..: . : . . : ::. . . :: . :::.... .: : .:: :. .
CCDS11 RVNAVNPTVVMTSMGQ---ATWSDPHKA--KTMLNRIPLGKFAEVEHVVNAILFLLSDRS
180 190 200 210 220
240 250 260 270
pF1KB6 NFCTGIELLVTGGAELGYGCKASRSTPVDAPDIPS
.. :: : : ::
CCDS11 GMTTGSTLPVEGGFWAC
230 240
>>CCDS3812.1 CBR4 gene_id:84869|Hs108|chr4 (237 aa)
initn: 378 init1: 200 opt: 309 Z-score: 376.3 bits: 77.2 E(32554): 1.2e-14
Smith-Waterman score: 375; 31.1% identity (64.8% similar) in 244 aa overlap (10-251:3-235)
10 20 30 40 50 60
pF1KB6 MATGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFIL
:: .: ::.:::: .... .. .: :... .. :..: .: : . .
CCDS38 MDKVCAVFGGSRGIGRAVAQLMARKGYRLAVIARNLEGAKAAAGDLGGDHLAF
10 20 30 40 50
70 80 90 100 110
pF1KB6 -CDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTY
:::..: ::.. : ...::.. .:: :: . . :... . . :. ::::..
CCDS38 SCDVAKEHDVQNTFEELEKHLGRVNFLVNAAGINRDGLLVR-TKTEDMVSQLHTNLLGSM
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 TLTKLALPYLRKSQG-NVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVR
: :. . ..:: ...:..:.:: :.. : :.::.......::: . . .:
CCDS38 LTCKAAMRTMIQQQGGSIVNVGSIVGLKGNSGQSVYSASKGGLVGFSRALAKEVARKKIR
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB6 VNCISPGNIWTPLWEELAALMPDPRATIREGMLAQPLGRMGQPAEVGAAAVFLASEANFC
:: ..:: . : . ..: . ..... ::::.:. ::. :.::: :. .
CCDS38 VNVVAPGFVHTDMTKDLK------EEHLKKNI---PLGRFGETIEVAHAVVFLL-ESPYI
180 190 200 210 220
240 250 260 270
pF1KB6 TGIELLVTGGAELGYGCKASRSTPVDAPDIPS
:: :.: :: .:
CCDS38 TGHVLVVDGGLQLIL
230
>>CCDS41927.1 DHRS2 gene_id:10202|Hs108|chr14 (300 aa)
initn: 304 init1: 226 opt: 303 Z-score: 367.7 bits: 75.9 E(32554): 3.7e-14
Smith-Waterman score: 303; 34.8% identity (66.8% similar) in 187 aa overlap (8-189:35-220)
10 20 30
pF1KB6 MATGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVV
:..:.::::. ::: .:.: .. .::.::
CCDS41 VARGYQGWFHPCARLSVRMSSTGIDRKGVLANRVAVVTGSTSGIGFAIARRLARDGAHVV
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB6 ICD-KDESGGRA---LEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHH
: . :... :: :. : ... :.: : . .: . ::...... : .: .: .:: .
CCDS41 ISSRKQQNVDRAMAKLQGEGLSVAGIVCHVGKAEDREQLVAKALEHCGGVDFLVCSAGVN
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB6 PPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVP
: :: : . ..: .:. . : . :::... .: :: .:: ..: . . :.
CCDS41 PLVGSTLGTSEQIWDKILSVNVKSPALLLSQLLPYMENRRGAVILVSS-IAAYNPVVALG
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB6 -YVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRATIREGMLA
: ..: :. ..:..:::. .: .::::. :: : :
CCDS41 VYNVSKTALLGLTRTLALELAPKDIRVNCVVPGIIKTDFSKVVRIGFMGMSLSGRTSRNI
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB6 QPLGRMGQPAEVGAAAVFLASEANFCTGIELLVTGGAELGYGCKASRSTPVDAPDIPS
CCDS41 ISCRGLGSQRTVQESCPSCALQMPATSTGRTLRWQATPLGSERSGGGCVAVVPGPGA
250 260 270 280 290 300
270 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 18:28:21 2016 done: Fri Nov 4 18:28:22 2016
Total Scan time: 2.330 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]